HEADER HYDROLASE 30-NOV-12 4I7T TITLE T4 LYSOZYME L99A/M102H WITH 2-BROMO-5-HYDROXYBENZALDEHYDE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENDOLYSIN, LYSIS PROTEIN, MURAMIDASE; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 GENE: E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MERSKI,B.K.SHOICHET REVDAT 3 20-SEP-23 4I7T 1 REMARK SEQADV LINK REVDAT 2 24-APR-13 4I7T 1 JRNL REVDAT 1 27-MAR-13 4I7T 0 JRNL AUTH M.MERSKI,B.K.SHOICHET JRNL TITL THE IMPACT OF INTRODUCING A HISTIDINE INTO AN APOLAR CAVITY JRNL TITL 2 SITE ON DOCKING AND LIGAND RECOGNITION. JRNL REF J.MED.CHEM. V. 56 2874 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23473072 JRNL DOI 10.1021/JM301823G REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 52336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0123 - 3.8220 0.88 3164 131 0.1705 0.1760 REMARK 3 2 3.8220 - 3.0338 0.92 3227 137 0.1598 0.1621 REMARK 3 3 3.0338 - 2.6503 0.94 3287 138 0.1710 0.1897 REMARK 3 4 2.6503 - 2.4080 0.95 3354 142 0.1613 0.2138 REMARK 3 5 2.4080 - 2.2354 0.96 3360 144 0.1587 0.1973 REMARK 3 6 2.2354 - 2.1036 0.97 3391 144 0.1617 0.1900 REMARK 3 7 2.1036 - 1.9983 0.98 3437 139 0.1643 0.2052 REMARK 3 8 1.9983 - 1.9113 0.98 3422 140 0.1615 0.1895 REMARK 3 9 1.9113 - 1.8377 0.98 3436 146 0.1663 0.1976 REMARK 3 10 1.8377 - 1.7743 0.99 3413 137 0.1746 0.2076 REMARK 3 11 1.7743 - 1.7188 0.99 3457 149 0.1933 0.2211 REMARK 3 12 1.7188 - 1.6697 0.99 3453 144 0.2115 0.2564 REMARK 3 13 1.6697 - 1.6257 0.99 3460 143 0.2361 0.2706 REMARK 3 14 1.6257 - 1.5861 0.97 3410 137 0.2595 0.3008 REMARK 3 15 1.5861 - 1.5500 0.86 2962 132 0.2840 0.2566 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 56.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.69650 REMARK 3 B22 (A**2) : 1.70920 REMARK 3 B33 (A**2) : -0.01270 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.38380 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.021 3010 REMARK 3 ANGLE : 1.941 4079 REMARK 3 CHIRALITY : 0.142 444 REMARK 3 PLANARITY : 0.011 528 REMARK 3 DIHEDRAL : 13.481 1145 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID -10:208 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5627 14.2620 10.2181 REMARK 3 T TENSOR REMARK 3 T11: -0.0498 T22: -0.0313 REMARK 3 T33: -0.0506 T12: 0.0639 REMARK 3 T13: 0.0388 T23: -0.0557 REMARK 3 L TENSOR REMARK 3 L11: 0.6083 L22: 0.3086 REMARK 3 L33: 0.5063 L12: 0.1718 REMARK 3 L13: 0.1490 L23: -0.2994 REMARK 3 S TENSOR REMARK 3 S11: 0.1458 S12: -0.1954 S13: 0.1888 REMARK 3 S21: 0.1230 S22: 0.0413 S23: 0.1466 REMARK 3 S31: -0.1512 S32: -0.0748 S33: 0.6980 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID -9:206 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9924 20.9144 -9.3926 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.0450 REMARK 3 T33: 0.0535 T12: -0.0019 REMARK 3 T13: -0.0028 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.5024 L22: 0.6213 REMARK 3 L33: 0.6587 L12: 0.3412 REMARK 3 L13: 0.1546 L23: 0.2863 REMARK 3 S TENSOR REMARK 3 S11: 0.0133 S12: 0.0385 S13: -0.0338 REMARK 3 S21: -0.0084 S22: 0.0467 S23: -0.0033 REMARK 3 S31: 0.0605 S32: -0.0156 S33: -0.0316 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4I7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.116 REMARK 200 MONOCHROMATOR : TWO FLAT SI(111) CRYSTALS, REMARK 200 MOUNTED IN A MODEL DCM FROM KHOZU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52337 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 47.989 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4E97 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, PH 4.5, 30% REMARK 280 (W/V) PEG-6000, 0.3 M LISO4, 3% (W/V) TMAO, 50 MM 2- REMARK 280 MERCAPTOETHANOL, 50 MM 2-HYDROXYETHYL DISULFIDE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.90500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 MET B -22 REMARK 465 GLY B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A -9 OG1 CG2 REMARK 470 THR A -8 OG1 CG2 REMARK 470 GLU A -7 CG CD OE1 OE2 REMARK 470 LYS A 16 CD CE NZ REMARK 470 LYS A 19 NZ REMARK 470 SER A 36 OG REMARK 470 LYS A 43 CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 ARG A 137 CD NE CZ NH1 NH2 REMARK 470 ASN A 163 CG OD1 ND2 REMARK 470 GLU B -7 CG CD OE1 OE2 REMARK 470 ARG B 137 CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 64 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 148 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG B 148 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 55 49.02 39.99 REMARK 500 CYS A 142 68.61 -151.51 REMARK 500 CYS A 142 69.08 -151.56 REMARK 500 ASP B 20 -169.45 -75.81 REMARK 500 CYS B 142 67.55 -153.58 REMARK 500 CYS B 142 70.17 -155.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1DW A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HED A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1DW B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E97 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 2-MERCAPTOETHANOL REMARK 900 RELATED ID: 4EKP RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH NITROBENZENE REMARK 900 RELATED ID: 4EKQ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH NITROPHENOL REMARK 900 RELATED ID: 4EKR RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 2-CYANOPHENOL REMARK 900 RELATED ID: 4EKS RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ISOXAZOLE DBREF 4I7T A 1 164 UNP P00720 LYS_BPT4 1 164 DBREF 4I7T B 1 164 UNP P00720 LYS_BPT4 1 164 SEQADV 4I7T MET A -22 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLY A -21 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -20 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -19 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -18 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -17 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -16 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS A -15 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASP A -14 UNP P00720 EXPRESSION TAG SEQADV 4I7T TYR A -13 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASP A -12 UNP P00720 EXPRESSION TAG SEQADV 4I7T ILE A -11 UNP P00720 EXPRESSION TAG SEQADV 4I7T PRO A -10 UNP P00720 EXPRESSION TAG SEQADV 4I7T THR A -9 UNP P00720 EXPRESSION TAG SEQADV 4I7T THR A -8 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLU A -7 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASN A -6 UNP P00720 EXPRESSION TAG SEQADV 4I7T LEU A -5 UNP P00720 EXPRESSION TAG SEQADV 4I7T TYR A -4 UNP P00720 EXPRESSION TAG SEQADV 4I7T PHE A -3 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLN A -2 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLY A -1 UNP P00720 EXPRESSION TAG SEQADV 4I7T SER A 0 UNP P00720 EXPRESSION TAG SEQADV 4I7T CYS A 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 4I7T ASP A 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 4I7T ALA A 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 4I7T HIS A 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 4I7T VAL A 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 4I7T VAL A 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 4I7T CYS A 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 4I7T ASP A 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQADV 4I7T MET B -22 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLY B -21 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -20 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -19 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -18 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -17 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -16 UNP P00720 EXPRESSION TAG SEQADV 4I7T HIS B -15 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASP B -14 UNP P00720 EXPRESSION TAG SEQADV 4I7T TYR B -13 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASP B -12 UNP P00720 EXPRESSION TAG SEQADV 4I7T ILE B -11 UNP P00720 EXPRESSION TAG SEQADV 4I7T PRO B -10 UNP P00720 EXPRESSION TAG SEQADV 4I7T THR B -9 UNP P00720 EXPRESSION TAG SEQADV 4I7T THR B -8 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLU B -7 UNP P00720 EXPRESSION TAG SEQADV 4I7T ASN B -6 UNP P00720 EXPRESSION TAG SEQADV 4I7T LEU B -5 UNP P00720 EXPRESSION TAG SEQADV 4I7T TYR B -4 UNP P00720 EXPRESSION TAG SEQADV 4I7T PHE B -3 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLN B -2 UNP P00720 EXPRESSION TAG SEQADV 4I7T GLY B -1 UNP P00720 EXPRESSION TAG SEQADV 4I7T SER B 0 UNP P00720 EXPRESSION TAG SEQADV 4I7T CYS B 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 4I7T ASP B 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 4I7T ALA B 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 4I7T HIS B 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 4I7T VAL B 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 4I7T VAL B 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 4I7T CYS B 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 4I7T ASP B 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQRES 1 A 187 MET GLY HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO SEQRES 2 A 187 THR THR GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE SEQRES 3 A 187 PHE GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS SEQRES 4 A 187 ILE TYR LYS ASP CYS GLU GLY TYR TYR THR ILE GLY ILE SEQRES 5 A 187 GLY HIS LEU LEU THR LYS SER PRO ASP LEU ASN ALA ALA SEQRES 6 A 187 LYS SER GLU LEU ASP LYS ALA ILE GLY ARG ASN CYS ASN SEQRES 7 A 187 GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN SEQRES 8 A 187 GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN SEQRES 9 A 187 ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL SEQRES 10 A 187 ARG ARG CYS ALA ALA ILE ASN HIS VAL PHE GLN MET GLY SEQRES 11 A 187 VAL THR GLY VAL ALA GLY PHE THR ASN VAL LEU ARG MET SEQRES 12 A 187 LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU SEQRES 13 A 187 ALA LYS SER ARG TRP TYR ASN GLN CYS PRO ASP ARG ALA SEQRES 14 A 187 LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP SEQRES 15 A 187 ALA TYR LYS ASN LEU SEQRES 1 B 187 MET GLY HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO SEQRES 2 B 187 THR THR GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE SEQRES 3 B 187 PHE GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS SEQRES 4 B 187 ILE TYR LYS ASP CYS GLU GLY TYR TYR THR ILE GLY ILE SEQRES 5 B 187 GLY HIS LEU LEU THR LYS SER PRO ASP LEU ASN ALA ALA SEQRES 6 B 187 LYS SER GLU LEU ASP LYS ALA ILE GLY ARG ASN CYS ASN SEQRES 7 B 187 GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN SEQRES 8 B 187 GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN SEQRES 9 B 187 ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL SEQRES 10 B 187 ARG ARG CYS ALA ALA ILE ASN HIS VAL PHE GLN MET GLY SEQRES 11 B 187 VAL THR GLY VAL ALA GLY PHE THR ASN VAL LEU ARG MET SEQRES 12 B 187 LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU SEQRES 13 B 187 ALA LYS SER ARG TRP TYR ASN GLN CYS PRO ASP ARG ALA SEQRES 14 B 187 LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP SEQRES 15 B 187 ALA TYR LYS ASN LEU HET BME A 201 4 HET 1DW A 202 10 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 A 205 5 HET ACT A 206 4 HET BME A 207 4 HET HED A 208 8 HET BME B 201 4 HET 1DW B 202 10 HET SO4 B 203 5 HET SO4 B 204 5 HET ACT B 205 4 HET BME B 206 8 HETNAM BME BETA-MERCAPTOETHANOL HETNAM 1DW 2-BROMO-5-HYDROXYBENZALDEHYDE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM HED 2-HYDROXYETHYL DISULFIDE FORMUL 3 BME 4(C2 H6 O S) FORMUL 4 1DW 2(C7 H5 BR O2) FORMUL 5 SO4 5(O4 S 2-) FORMUL 8 ACT 2(C2 H3 O2 1-) FORMUL 10 HED C4 H10 O2 S2 FORMUL 17 HOH *320(H2 O) HELIX 1 1 THR A -9 MET A 1 1 11 HELIX 2 2 ASN A 2 GLY A 12 1 11 HELIX 3 3 ASP A 38 GLY A 51 1 14 HELIX 4 4 THR A 59 ARG A 80 1 22 HELIX 5 5 LYS A 83 LEU A 91 1 9 HELIX 6 6 ASP A 92 GLY A 107 1 16 HELIX 7 7 GLY A 107 GLY A 113 1 7 HELIX 8 8 PHE A 114 GLN A 123 1 10 HELIX 9 9 ARG A 125 ALA A 134 1 10 HELIX 10 10 SER A 136 CYS A 142 1 7 HELIX 11 11 CYS A 142 GLY A 156 1 15 HELIX 12 12 TRP A 158 LYS A 162 5 5 HELIX 13 13 THR B -8 MET B 1 1 10 HELIX 14 14 ASN B 2 GLY B 12 1 11 HELIX 15 15 ASP B 38 GLY B 51 1 14 HELIX 16 16 THR B 59 ARG B 80 1 22 HELIX 17 17 LYS B 83 LEU B 91 1 9 HELIX 18 18 ASP B 92 GLY B 107 1 16 HELIX 19 19 GLY B 107 GLY B 113 1 7 HELIX 20 20 PHE B 114 GLN B 123 1 10 HELIX 21 21 ARG B 125 ALA B 134 1 10 HELIX 22 22 SER B 136 CYS B 142 1 7 HELIX 23 23 CYS B 142 GLY B 156 1 15 HELIX 24 24 TRP B 158 LYS B 162 5 5 SHEET 1 A 3 ARG A 14 LYS A 19 0 SHEET 2 A 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 A 3 HIS A 31 THR A 34 -1 O LEU A 33 N TYR A 25 SHEET 1 B 3 ARG B 14 LYS B 19 0 SHEET 2 B 3 TYR B 25 GLY B 28 -1 O GLY B 28 N ARG B 14 SHEET 3 B 3 HIS B 31 LEU B 32 -1 O HIS B 31 N ILE B 27 SSBOND 1 CYS A 21 CYS A 142 1555 1555 2.02 SSBOND 2 CYS B 21 CYS B 142 1555 1555 2.03 LINK SG CYS A 97 S2 BME A 201 1555 1555 2.07 LINK SG CYS B 97 S2 BME B 201 1555 1555 2.05 SITE 1 AC1 3 ILE A 3 ALA A 93 CYS A 97 SITE 1 AC2 10 ILE A 78 LEU A 84 TYR A 88 ALA A 99 SITE 2 AC2 10 HIS A 102 VAL A 103 VAL A 111 LEU A 118 SITE 3 AC2 10 LEU A 121 PHE A 153 SITE 1 AC3 4 ARG A 14 LEU A 15 LYS A 16 HOH A 323 SITE 1 AC4 4 ARG A 76 ARG A 80 HOH A 343 LYS B 135 SITE 1 AC5 4 ARG A 119 ARG A 125 HOH A 451 LYS B 48 SITE 1 AC6 3 GLU A 5 GLU A 64 GLY B 51 SITE 1 AC7 9 PHE A -3 MET A 1 ILE A 9 TYR A 161 SITE 2 AC7 9 LYS A 162 LEU A 164 HOH A 409 HOH B 341 SITE 3 AC7 9 HOH B 429 SITE 1 AC8 10 THR A 109 GLY A 113 HOH A 372 HOH A 464 SITE 2 AC8 10 LYS B 147 THR B 151 ARG B 154 HOH B 375 SITE 3 AC8 10 HOH B 376 HOH B 377 SITE 1 AC9 3 ILE B 3 ALA B 93 CYS B 97 SITE 1 BC1 10 ILE B 78 LEU B 84 TYR B 88 ALA B 99 SITE 2 BC1 10 HIS B 102 VAL B 103 VAL B 111 LEU B 118 SITE 3 BC1 10 LEU B 121 PHE B 153 SITE 1 BC2 3 ARG B 119 ARG B 125 HOH B 411 SITE 1 BC3 3 ARG B 76 ARG B 80 HOH B 306 SITE 1 BC4 3 LEU B 15 LYS B 16 HOH B 389 SITE 1 BC5 8 GLY B 30 HIS B 31 LEU B 32 ASP B 70 SITE 2 BC5 8 PHE B 104 HOH B 332 HOH B 347 HOH B 392 CRYST1 48.060 75.810 52.710 90.00 93.11 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020807 0.000000 0.001130 0.00000 SCALE2 0.000000 0.013191 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019000 0.00000