data_4IA8 # _entry.id 4IA8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4IA8 RCSB RCSB076499 WWPDB D_1000076499 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4FN3 'S52A Mutant Free Protein' unspecified PDB 4FBI 'R46A Mutant Free Protein' unspecified PDB 4F8D 'R46A Mutant Free Protein' unspecified PDB 3G5G 'Native Free Protein' unspecified PDB 3FYA 'R35A Mutant Free Protein' unspecified PDB 3CLC 'DNA Bound Tetramer' unspecified PDB 3S8Q 'DNA Bound Dimer (OL)' unspecified PDB 3UFD 'DNA Bound Dimer (OM' unspecified PDB 4I6R 'Native Free Protein (Triclinic)' unspecified PDB 4I6T 'T36A Mutant Free Protein' unspecified PDB 4I6U 'Y37F Mutant Free Protein' unspecified PDB 4I8T 'Dimer and 19bp DNA co-crystal' unspecified # _pdbx_database_status.entry_id 4IA8 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-06 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martin, R.N.A.' 1 'McGeehan, J.E.' 2 'Kneale, G.G.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.' 'Plos One' 9 e98365 e98365 2014 ? US 1932-6203 ? ? 24887147 10.1371/journal.pone.0098365 1 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 2 'Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.' 'Nucleic Acids Res.' 40 4158 4167 2012 NARHAD UK 0305-1048 0389 ? 22210861 10.1093/nar/gkr1250 3 'The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.' 'Nucleic Acids Res.' 40 10532 10542 2012 NARHAD UK 0305-1048 0389 ? 22941636 10.1093/nar/gks718 4 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Martin, R.N.' 1 primary 'McGeehan, J.E.' 2 primary 'Kneale, G.' 3 1 'Ball, N.' 4 1 'Streeter, S.D.' 5 1 'Kneale, G.G.' 6 1 'McGeehan, J.E.' 7 2 'McGeehan, J.E.' 8 2 'Ball, N.J.' 9 2 'Streeter, S.D.' 10 2 'Thresh, S.J.' 11 2 'Kneale, G.G.' 12 3 'Ball, N.J.' 13 3 'McGeehan, J.E.' 14 3 'Streeter, S.D.' 15 3 'Thresh, S.J.' 16 3 'Kneale, G.G.' 17 4 'Ball, N.' 18 4 'Streeter, S.D.' 19 4 'Kneale, G.G.' 20 4 'McGeehan, J.E.' 21 # _cell.length_a 34.260 _cell.length_b 34.280 _cell.length_c 41.120 _cell.angle_alpha 104.440 _cell.angle_beta 108.920 _cell.angle_gamma 97.420 _cell.entry_id 4IA8 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1' _symmetry.entry_id 4IA8 _symmetry.Int_Tables_number 1 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein' 9429.078 2 ? A37W ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 LEU n 1 9 LEU n 1 10 SER n 1 11 LYS n 1 12 VAL n 1 13 SER n 1 14 PHE n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ILE n 1 20 ARG n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 GLN n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 TYR n 1 33 LYS n 1 34 SER n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 THR n 1 40 ALA n 1 41 ILE n 1 42 SER n 1 43 GLY n 1 44 ILE n 1 45 GLU n 1 46 ARG n 1 47 ASN n 1 48 SER n 1 49 ARG n 1 50 ASN n 1 51 LEU n 1 52 THR n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ILE n 1 60 MET n 1 61 LYS n 1 62 GLY n 1 63 LEU n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 PHE n 1 71 PHE n 1 72 GLU n 1 73 MET n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene esp1396IC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RFL1396 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacter sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8GGH0_9ENTR _struct_ref.pdbx_db_accession Q8GGH0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IA8 A 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 2 1 4IA8 B 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IA8 GLY A 1 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' -2 1 1 4IA8 SER A 2 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' -1 2 1 4IA8 HIS A 3 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' 0 3 1 4IA8 ALA A 40 ? UNP Q8GGH0 TYR 37 'ENGINEERED MUTATION' 37 4 2 4IA8 GLY B 1 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' -2 5 2 4IA8 SER B 2 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' -1 6 2 4IA8 HIS B 3 ? UNP Q8GGH0 ? ? 'EXPRESSION TAG' 0 7 2 4IA8 ALA B 40 ? UNP Q8GGH0 TYR 37 'ENGINEERED MUTATION' 37 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4IA8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2 M lithium sulfate, 0.1 M sodium acetate, 50 % v/v PEG 400, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date 2011-10-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.917285 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.917285 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 # _reflns.entry_id 4IA8 _reflns.d_resolution_high 1.850 _reflns.d_resolution_low 31.550 _reflns.number_obs 13243 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_netI_over_sigmaI 5.800 _reflns.pdbx_redundancy 1.900 _reflns.percent_possible_obs 75.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 19685 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.850 1.890 ? 2927 ? 0.011 1.500 ? ? 1.900 ? 733 79.100 1 1 9.060 31.550 ? 473 ? 0.011 14.000 ? ? 2.100 ? 115 95.800 2 1 # _refine.entry_id 4IA8 _refine.ls_d_res_high 1.8500 _refine.ls_d_res_low 31.550 _refine.pdbx_ls_sigma_F 5.630 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 89.6500 _refine.ls_number_reflns_obs 12775 _refine.ls_number_reflns_all 19685 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1769 _refine.ls_R_factor_R_work 0.1747 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2202 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.2900 _refine.ls_number_reflns_R_free 676 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.4732 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1400 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdb entry 3G5G' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8850 _refine.B_iso_max 80.260 _refine.B_iso_min 9.820 _refine.pdbx_overall_phase_error 18.9900 _refine.occupancy_max 1.000 _refine.occupancy_min 0.170 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1244 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 1293 _refine_hist.d_res_high 1.8500 _refine_hist.d_res_low 31.550 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1298 0.018 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1744 1.732 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 210 0.127 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 214 0.008 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 524 15.347 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.8501 1.9929 5 92.0000 2489 . 0.1182 0.1760 . 152 . 2641 . . 'X-RAY DIFFRACTION' 1.9929 2.1934 5 91.0000 2463 . 0.1277 0.1946 . 139 . 2602 . . 'X-RAY DIFFRACTION' 2.1934 2.5107 5 86.0000 2292 . 0.1592 0.2108 . 149 . 2441 . . 'X-RAY DIFFRACTION' 2.5107 3.1628 5 91.0000 2489 . 0.1964 0.2314 . 115 . 2604 . . 'X-RAY DIFFRACTION' 3.1628 32.3180 5 87.0000 2366 . 0.1903 0.2354 . 121 . 2487 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4IA8 _struct.title 'Crystal Structure of a Y37A mutant of the Restriction-Modification Controller Protein C.Esp1396I' _struct.pdbx_descriptor 'Regulatory protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IA8 _struct_keywords.text 'Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 23 ? SER A 3 LYS A 20 1 ? 18 HELX_P HELX_P2 2 THR A 26 ? ASN A 35 ? THR A 23 ASN A 32 1 ? 10 HELX_P HELX_P3 3 ASP A 37 ? ASN A 47 ? ASP A 34 ASN A 44 1 ? 11 HELX_P HELX_P4 4 THR A 52 ? GLU A 64 ? THR A 49 GLU A 61 1 ? 13 HELX_P HELX_P5 5 SER A 66 ? ASP A 82 ? SER A 63 ASP A 79 1 ? 17 HELX_P HELX_P6 6 PHE B 7 ? LYS B 23 ? PHE B 4 LYS B 20 1 ? 17 HELX_P HELX_P7 7 THR B 26 ? ASN B 35 ? THR B 23 ASN B 32 1 ? 10 HELX_P HELX_P8 8 ASP B 37 ? ARG B 46 ? ASP B 34 ARG B 43 1 ? 10 HELX_P HELX_P9 9 THR B 52 ? GLU B 64 ? THR B 49 GLU B 61 1 ? 13 HELX_P HELX_P10 10 SER B 66 ? ASP B 82 ? SER B 63 ASP B 79 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 ARG A 20 ? ARG A 17 . ? 1_666 ? 2 AC1 10 THR A 26 ? THR A 23 . ? 1_666 ? 3 AC1 10 GLN A 27 ? GLN A 24 . ? 1_666 ? 4 AC1 10 ARG A 38 ? ARG A 35 . ? 1_666 ? 5 AC1 10 THR B 26 ? THR B 23 . ? 1_555 ? 6 AC1 10 GLN B 27 ? GLN B 24 . ? 1_555 ? 7 AC1 10 GLU B 28 ? GLU B 25 . ? 1_555 ? 8 AC1 10 ARG B 38 ? ARG B 35 . ? 1_555 ? 9 AC1 10 HOH E . ? HOH B 201 . ? 1_555 ? 10 AC1 10 HOH E . ? HOH B 203 . ? 1_555 ? # _atom_sites.entry_id 4IA8 _atom_sites.fract_transf_matrix[1][1] 0.029189 _atom_sites.fract_transf_matrix[1][2] 0.003801 _atom_sites.fract_transf_matrix[1][3] 0.011767 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029418 _atom_sites.fract_transf_matrix[2][3] 0.009608 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027044 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 ? ? ? A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 SER 13 10 10 SER SER A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 LYS 18 15 15 LYS LYS A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 ALA 40 37 37 ALA ALA A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PHE 70 67 67 PHE PHE A . n A 1 71 PHE 71 68 68 PHE PHE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 HIS 81 78 78 HIS HIS A . n A 1 82 ASP 82 79 79 ASP ASP A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 ? ? ? B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 PHE 7 4 4 PHE PHE B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 SER 13 10 10 SER SER B . n B 1 14 PHE 14 11 11 PHE PHE B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ILE 16 13 13 ILE ILE B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 LYS 18 15 15 LYS LYS B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 GLU 22 19 19 GLU GLU B . n B 1 23 LYS 23 20 20 LYS LYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 THR 26 23 23 THR THR B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 ALA 31 28 28 ALA ALA B . n B 1 32 TYR 32 29 29 TYR TYR B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 SER 34 31 31 SER SER B . n B 1 35 ASN 35 32 32 ASN ASN B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 ARG 38 35 35 ARG ARG B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 ALA 40 37 37 ALA ALA B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 GLY 43 40 40 GLY GLY B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 GLU 45 42 42 GLU GLU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 ASN 50 47 47 ASN ASN B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 LYS 54 51 51 LYS LYS B . n B 1 55 SER 55 52 52 SER SER B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLU 57 54 54 GLU GLU B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 ILE 59 56 56 ILE ILE B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 GLU 64 61 61 GLU GLU B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PHE 70 67 67 PHE PHE B . n B 1 71 PHE 71 68 68 PHE PHE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 MET 73 70 70 MET MET B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 LYS 76 73 73 LYS LYS B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 ILE 78 75 75 ILE ILE B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 LYS 80 77 77 LYS LYS B . n B 1 81 HIS 81 78 78 HIS HIS B . n B 1 82 ASP 82 79 79 ASP ASP B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2150 ? 1 MORE -28 ? 1 'SSA (A^2)' 8240 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-11 2 'Structure model' 1 1 2014-06-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.4798 _pdbx_refine_tls.origin_y 3.8852 _pdbx_refine_tls.origin_z 28.8809 _pdbx_refine_tls.T[1][1] 0.1263 _pdbx_refine_tls.T[2][2] 0.1290 _pdbx_refine_tls.T[3][3] 0.1152 _pdbx_refine_tls.T[1][2] 0.0230 _pdbx_refine_tls.T[1][3] 0.0238 _pdbx_refine_tls.T[2][3] 0.0319 _pdbx_refine_tls.L[1][1] 1.6770 _pdbx_refine_tls.L[2][2] 2.2313 _pdbx_refine_tls.L[3][3] 2.1654 _pdbx_refine_tls.L[1][2] 1.1874 _pdbx_refine_tls.L[1][3] 1.4791 _pdbx_refine_tls.L[2][3] 1.8303 _pdbx_refine_tls.S[1][1] -0.0364 _pdbx_refine_tls.S[2][2] -0.0229 _pdbx_refine_tls.S[3][3] 0.0536 _pdbx_refine_tls.S[1][2] 0.0428 _pdbx_refine_tls.S[1][3] 0.0934 _pdbx_refine_tls.S[2][3] 0.0993 _pdbx_refine_tls.S[2][1] 0.0326 _pdbx_refine_tls.S[3][1] -0.0581 _pdbx_refine_tls.S[3][2] -0.0397 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 79 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 3 B 79 all ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 B 1 B 101 all ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 B 1 B 224 all ? ? ? ? ? # _pdbx_phasing_MR.entry_id 4IA8 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.270 _pdbx_phasing_MR.d_res_low_rotation 31.550 _pdbx_phasing_MR.d_res_high_translation 4.270 _pdbx_phasing_MR.d_res_low_translation 31.550 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 Aimless 0.1.26 03/07/12 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PHASER 2.5.1 'Tue Jul 10 12:42:19 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.8_1069 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 GDA . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 44 ? ? -162.27 116.40 2 1 ASN B 47 ? ? -66.12 -179.32 3 1 ASN B 47 ? ? -69.14 -177.33 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLU 2 ? A GLU 5 6 1 Y 1 B GLY -2 ? B GLY 1 7 1 Y 1 B SER -1 ? B SER 2 8 1 Y 1 B HIS 0 ? B HIS 3 9 1 Y 1 B MET 1 ? B MET 4 10 1 Y 1 B GLU 2 ? B GLU 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 101 1 SO4 SO4 B . D 3 HOH 1 101 3 HOH HOH A . D 3 HOH 2 102 5 HOH HOH A . D 3 HOH 3 103 6 HOH HOH A . D 3 HOH 4 104 8 HOH HOH A . D 3 HOH 5 105 9 HOH HOH A . D 3 HOH 6 106 13 HOH HOH A . D 3 HOH 7 107 14 HOH HOH A . D 3 HOH 8 108 17 HOH HOH A . D 3 HOH 9 109 18 HOH HOH A . D 3 HOH 10 110 19 HOH HOH A . D 3 HOH 11 111 20 HOH HOH A . D 3 HOH 12 112 25 HOH HOH A . D 3 HOH 13 113 27 HOH HOH A . D 3 HOH 14 114 29 HOH HOH A . D 3 HOH 15 115 31 HOH HOH A . D 3 HOH 16 116 33 HOH HOH A . D 3 HOH 17 117 35 HOH HOH A . D 3 HOH 18 118 37 HOH HOH A . D 3 HOH 19 119 40 HOH HOH A . D 3 HOH 20 120 43 HOH HOH A . E 3 HOH 1 201 1 HOH HOH B . E 3 HOH 2 202 2 HOH HOH B . E 3 HOH 3 203 4 HOH HOH B . E 3 HOH 4 204 7 HOH HOH B . E 3 HOH 5 205 10 HOH HOH B . E 3 HOH 6 206 11 HOH HOH B . E 3 HOH 7 207 12 HOH HOH B . E 3 HOH 8 208 15 HOH HOH B . E 3 HOH 9 209 16 HOH HOH B . E 3 HOH 10 210 21 HOH HOH B . E 3 HOH 11 211 22 HOH HOH B . E 3 HOH 12 212 23 HOH HOH B . E 3 HOH 13 213 24 HOH HOH B . E 3 HOH 14 214 26 HOH HOH B . E 3 HOH 15 215 28 HOH HOH B . E 3 HOH 16 216 30 HOH HOH B . E 3 HOH 17 217 32 HOH HOH B . E 3 HOH 18 218 34 HOH HOH B . E 3 HOH 19 219 36 HOH HOH B . E 3 HOH 20 220 38 HOH HOH B . E 3 HOH 21 221 39 HOH HOH B . E 3 HOH 22 222 41 HOH HOH B . E 3 HOH 23 223 42 HOH HOH B . E 3 HOH 24 224 44 HOH HOH B . #