data_4IHY # _entry.id 4IHY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IHY pdb_00004ihy 10.2210/pdb4ihy/pdb NDB NA2166 ? ? RCSB RCSB076774 ? ? WWPDB D_1000076774 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4IHV . unspecified PDB 4IHW . unspecified PDB 4IHX . unspecified # _pdbx_database_status.entry_id 4IHY _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-19 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hancock, S.P.' 1 'Cascio, D.' 2 'Johnson, R.C.' 3 # _citation.id primary _citation.title 'Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 6750 _citation.page_last 6760 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23661683 _citation.pdbx_database_id_DOI 10.1093/nar/gkt357 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hancock, S.P.' 1 ? primary 'Ghane, T.' 2 ? primary 'Cascio, D.' 3 ? primary 'Rohs, R.' 4 ? primary 'Di Felice, R.' 5 ? primary 'Johnson, R.C.' 6 ? # _cell.length_a 43.210 _cell.length_b 94.050 _cell.length_c 155.040 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4IHY _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4IHY _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein fis' 11252.918 2 ? ? ? ? 2 polymer syn '27-bp DNA Strand A' 8316.362 1 ? ? ? ? 3 polymer syn '27-bp DNA Strand B' 8198.321 1 ? ? ? ? 4 water nat water 18.015 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Factor for Inversion Stimulation' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALM MGINRGTLRKKLKKYGMN ; ;MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALM MGINRGTLRKKLKKYGMN ; A,B ? 2 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DT)(DT)(DT)(DG)(DT)(DT)(DT)(DG)(DI)(DI)(DC)(DI)(DC)(DT)(DG)(DA)(DG) (DC)(DA)(DA)(DA)(DT)(DT)(DT) ; AAATTTGTTTGIICICTGAGCAAATTT C ? 3 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DT)(DT)(DT)(DG)(DC)(DT)(DC)(DA)(DI)(DC)(DI)(DC)(DC)(DC)(DA)(DA)(DA) (DC)(DA)(DA)(DA)(DT)(DT)(DT) ; AAATTTGCTCAICICCCAAACAAATTT D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PHE n 1 3 GLU n 1 4 GLN n 1 5 ARG n 1 6 VAL n 1 7 ASN n 1 8 SER n 1 9 ASP n 1 10 VAL n 1 11 LEU n 1 12 THR n 1 13 VAL n 1 14 SER n 1 15 THR n 1 16 VAL n 1 17 ASN n 1 18 SER n 1 19 GLN n 1 20 ASP n 1 21 GLN n 1 22 VAL n 1 23 THR n 1 24 GLN n 1 25 LYS n 1 26 PRO n 1 27 LEU n 1 28 ARG n 1 29 ASP n 1 30 SER n 1 31 VAL n 1 32 LYS n 1 33 GLN n 1 34 ALA n 1 35 LEU n 1 36 LYS n 1 37 ASN n 1 38 TYR n 1 39 PHE n 1 40 ALA n 1 41 GLN n 1 42 LEU n 1 43 ASN n 1 44 GLY n 1 45 GLN n 1 46 ASP n 1 47 VAL n 1 48 ASN n 1 49 ASP n 1 50 LEU n 1 51 TYR n 1 52 GLU n 1 53 LEU n 1 54 VAL n 1 55 LEU n 1 56 ALA n 1 57 GLU n 1 58 VAL n 1 59 GLU n 1 60 GLN n 1 61 PRO n 1 62 LEU n 1 63 LEU n 1 64 ASP n 1 65 MET n 1 66 VAL n 1 67 MET n 1 68 GLN n 1 69 TYR n 1 70 THR n 1 71 ARG n 1 72 GLY n 1 73 ASN n 1 74 GLN n 1 75 THR n 1 76 ARG n 1 77 ALA n 1 78 ALA n 1 79 LEU n 1 80 MET n 1 81 MET n 1 82 GLY n 1 83 ILE n 1 84 ASN n 1 85 ARG n 1 86 GLY n 1 87 THR n 1 88 LEU n 1 89 ARG n 1 90 LYS n 1 91 LYS n 1 92 LEU n 1 93 LYS n 1 94 LYS n 1 95 TYR n 1 96 GLY n 1 97 MET n 1 98 ASN n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DT n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DT n 2 11 DG n 2 12 DI n 2 13 DI n 2 14 DC n 2 15 DI n 2 16 DC n 2 17 DT n 2 18 DG n 2 19 DA n 2 20 DG n 2 21 DC n 2 22 DA n 2 23 DA n 2 24 DA n 2 25 DT n 2 26 DT n 2 27 DT n 3 1 DA n 3 2 DA n 3 3 DA n 3 4 DT n 3 5 DT n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DT n 3 10 DC n 3 11 DA n 3 12 DI n 3 13 DC n 3 14 DI n 3 15 DC n 3 16 DC n 3 17 DC n 3 18 DA n 3 19 DA n 3 20 DA n 3 21 DC n 3 22 DA n 3 23 DA n 3 24 DA n 3 25 DT n 3 26 DT n 3 27 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ECDH1ME8569_3147, EcDH1_0445, fis' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP C9QXL3_ECOD1 C9QXL3 1 ;MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALM MGINRGTLRKKLKKYGMN ; 1 ? 2 PDB 4IHY 4IHY 2 AAATTTGTTTGIICICTGAGCAAATTT 1 ? 3 PDB 4IHY 4IHY 3 AAATTTGCTCAICICCCAAACAAATTT 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IHY A 1 ? 98 ? C9QXL3 1 ? 98 ? 1 98 2 1 4IHY B 1 ? 98 ? C9QXL3 1 ? 98 ? 1 98 3 2 4IHY C 1 ? 27 ? 4IHY 1 ? 27 ? 1 27 4 3 4IHY D 1 ? 27 ? 4IHY 1 ? 27 ? 1 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DI 'DNA linking' y "2'-DEOXYINOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 N4 O7 P' 332.207 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4IHY _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.04 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 69.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2 M sodium citrate, 0.1 M Tris-HCl, pH 8.5, 36% PEG400, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-07-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 4IHY _reflns.d_resolution_high 2.900 _reflns.number_obs 14611 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_netI_over_sigmaI 10.18 _reflns.percent_possible_obs 99.6 _reflns.B_iso_Wilson_estimate 69.195 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.0 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 7.72 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.900 2.980 7852 ? 1048 0.947 2.190 ? ? ? ? ? 99.9 1 1 2.980 3.060 8578 ? 1043 0.766 2.730 ? ? ? ? ? 99.8 2 1 3.060 3.150 8026 ? 996 0.495 4.020 ? ? ? ? ? 99.7 3 1 3.150 3.240 7909 ? 983 0.323 5.410 ? ? ? ? ? 100.0 4 1 3.240 3.350 7803 ? 964 0.271 6.160 ? ? ? ? ? 99.8 5 1 3.350 3.470 7083 ? 896 0.213 7.460 ? ? ? ? ? 99.7 6 1 3.470 3.600 7188 ? 902 0.182 8.710 ? ? ? ? ? 99.1 7 1 3.600 3.740 6629 ? 848 0.164 9.810 ? ? ? ? ? 99.8 8 1 3.740 3.910 6555 ? 831 0.139 10.780 ? ? ? ? ? 99.9 9 1 3.910 4.100 5975 ? 783 0.125 12.560 ? ? ? ? ? 99.1 10 1 4.100 4.320 5825 ? 761 0.106 14.380 ? ? ? ? ? 99.2 11 1 4.320 4.590 5277 ? 694 0.095 15.250 ? ? ? ? ? 99.1 12 1 4.590 4.900 5259 ? 684 0.089 15.650 ? ? ? ? ? 98.8 13 1 4.900 5.290 4694 ? 627 0.091 15.310 ? ? ? ? ? 99.7 14 1 5.290 5.800 4320 ? 584 0.087 16.240 ? ? ? ? ? 99.8 15 1 5.800 6.480 3851 ? 544 0.084 16.350 ? ? ? ? ? 100.0 16 1 6.480 7.490 3532 ? 483 0.070 18.000 ? ? ? ? ? 100.0 17 1 7.490 9.170 2971 ? 411 0.066 19.070 ? ? ? ? ? 99.8 18 1 9.170 12.970 2302 ? 337 0.060 19.410 ? ? ? ? ? 99.7 19 1 12.970 ? 1139 ? 192 0.063 18.060 ? ? ? ? ? 95.0 20 1 # _refine.entry_id 4IHY _refine.ls_d_res_high 2.900 _refine.ls_d_res_low 59.819 _refine.pdbx_ls_sigma_F 1.99 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.18 _refine.ls_number_reflns_obs 14553 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2323 _refine.ls_R_factor_R_work 0.2279 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2704 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.97 _refine.ls_number_reflns_R_free 1451 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.8703 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.4300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3IV5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7023 _refine.B_iso_max 110.630 _refine.B_iso_min 9.720 _refine.pdbx_overall_phase_error 34.1200 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1505 _refine_hist.pdbx_number_atoms_nucleic_acid 1096 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 2605 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low 59.819 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2757 0.009 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3932 1.557 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 450 0.076 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 320 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1108 26.309 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.900 3.0037 10 100.0 1258 . 0.3244 0.4184 . 140 . 1398 . . 'X-RAY DIFFRACTION' 3.0037 3.1240 10 100.0 1311 . 0.3071 0.3497 . 145 . 1456 . . 'X-RAY DIFFRACTION' 3.1240 3.2661 10 99.0 1274 . 0.2871 0.3110 . 141 . 1415 . . 'X-RAY DIFFRACTION' 3.2661 3.4383 10 99.0 1283 . 0.2552 0.3573 . 143 . 1426 . . 'X-RAY DIFFRACTION' 3.4383 3.6537 10 99.0 1302 . 0.2448 0.2918 . 144 . 1446 . . 'X-RAY DIFFRACTION' 3.6537 3.9358 10 100.0 1318 . 0.2316 0.2869 . 145 . 1463 . . 'X-RAY DIFFRACTION' 3.9358 4.3317 10 99.0 1300 . 0.2193 0.2472 . 144 . 1444 . . 'X-RAY DIFFRACTION' 4.3317 4.9583 10 99.0 1300 . 0.2036 0.2398 . 145 . 1445 . . 'X-RAY DIFFRACTION' 4.9583 6.2459 10 100.0 1347 . 0.2237 0.2562 . 148 . 1495 . . 'X-RAY DIFFRACTION' 6.2459 59.8318 10 98.0 1409 . 0.1902 0.2259 . 156 . 1565 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4IHY _struct.title 'Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IHY _struct_keywords.text 'Protein-DNA complex, HTH domain, minor groove compression, DNA bending, indirect recognition, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 27 ? LEU A 42 ? LEU A 27 LEU A 42 1 ? 16 HELX_P HELX_P2 2 ASP A 49 ? THR A 70 ? ASP A 49 THR A 70 1 ? 22 HELX_P HELX_P3 3 ASN A 73 ? GLY A 82 ? ASN A 73 GLY A 82 1 ? 10 HELX_P HELX_P4 4 ASN A 84 ? TYR A 95 ? ASN A 84 TYR A 95 1 ? 12 HELX_P HELX_P5 5 VAL B 6 ? LEU B 11 ? VAL B 6 LEU B 11 1 ? 6 HELX_P HELX_P6 6 LEU B 27 ? GLN B 41 ? LEU B 27 GLN B 41 1 ? 15 HELX_P HELX_P7 7 ASP B 49 ? THR B 70 ? ASP B 49 THR B 70 1 ? 22 HELX_P HELX_P8 8 ASN B 73 ? GLY B 82 ? ASN B 73 GLY B 82 1 ? 10 HELX_P HELX_P9 9 ASN B 84 ? TYR B 95 ? ASN B 84 TYR B 95 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DA 1 N1 ? ? ? 1_555 D DT 27 N3 ? ? C DA 1 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DA 1 N6 ? ? ? 1_555 D DT 27 O4 ? ? C DA 1 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 26 N3 ? ? C DA 2 D DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 26 O4 ? ? C DA 2 D DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 25 N3 ? ? C DA 3 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 25 O4 ? ? C DA 3 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 24 N1 ? ? C DT 4 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 24 N6 ? ? C DT 4 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 23 N1 ? ? C DT 5 D DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 23 N6 ? ? C DT 5 D DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 22 N1 ? ? C DT 6 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 22 N6 ? ? C DT 6 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 21 N3 ? ? C DG 7 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 21 O2 ? ? C DG 7 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 21 N4 ? ? C DG 7 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 20 N1 ? ? C DT 8 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 20 N6 ? ? C DT 8 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 9 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 9 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 18 N1 ? ? C DT 10 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 18 N6 ? ? C DT 10 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 17 N3 ? ? C DG 11 D DC 17 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog23 hydrog ? ? C DI 12 N1 ? ? ? 1_555 D DC 16 O2 ? ? C DI 12 D DC 16 1_555 ? ? ? ? ? ? 'DI-DC PAIR' ? ? ? hydrog24 hydrog ? ? C DI 13 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DI 13 D DC 15 1_555 ? ? ? ? ? ? 'DI-DC PAIR' ? ? ? hydrog25 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DI 14 O6 ? ? C DC 14 D DI 14 1_555 ? ? ? ? ? ? 'DC-DI PAIR' ? ? ? hydrog26 hydrog ? ? C DI 15 N1 ? ? ? 1_555 D DC 13 N3 ? ? C DI 15 D DC 13 1_555 ? ? ? ? ? ? 'DI-DC PAIR' ? ? ? hydrog27 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DI 12 O6 ? ? C DC 16 D DI 12 1_555 ? ? ? ? ? ? 'DC-DI PAIR' ? ? ? hydrog28 hydrog ? ? C DT 17 N3 ? ? ? 1_555 D DA 11 N1 ? ? C DT 17 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 17 O4 ? ? ? 1_555 D DA 11 N6 ? ? C DT 17 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 18 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 18 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 18 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 19 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 19 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 20 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 20 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 20 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 20 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 20 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 20 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 21 N4 ? ? ? 1_555 D DT 6 O4 ? ? C DC 21 D DT 6 1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ? ? ? hydrog39 hydrog ? ? C DC 21 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 21 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 21 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 21 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 21 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 21 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DA 22 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 22 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 22 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 22 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 23 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 23 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DA 23 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 23 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DA 24 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 24 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DA 24 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 24 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DT 25 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 25 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 25 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 25 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DT 26 N3 ? ? ? 1_555 D DA 2 N1 ? ? C DT 26 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DT 26 O4 ? ? ? 1_555 D DA 2 N6 ? ? C DT 26 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DT 27 N3 ? ? ? 1_555 D DA 1 N1 ? ? C DT 27 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DT 27 O4 ? ? ? 1_555 D DA 1 N6 ? ? C DT 27 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 43 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 43 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 44 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 44 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 12 ? VAL A 16 ? THR A 12 VAL A 16 A 2 VAL A 22 ? PRO A 26 ? VAL A 22 PRO A 26 B 1 THR B 12 ? VAL B 16 ? THR B 12 VAL B 16 B 2 VAL B 22 ? PRO B 26 ? VAL B 22 PRO B 26 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 15 ? N THR A 15 O THR A 23 ? O THR A 23 B 1 2 N THR B 15 ? N THR B 15 O THR B 23 ? O THR B 23 # _atom_sites.entry_id 4IHY _atom_sites.fract_transf_matrix[1][1] 0.023143 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010633 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006450 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PHE 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 GLN 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 ASN 7 7 ? ? ? A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 MET 97 97 97 MET MET A . n A 1 98 ASN 98 98 98 ASN ASN A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 PHE 2 2 2 PHE PHE B . n B 1 3 GLU 3 3 3 GLU GLU B . n B 1 4 GLN 4 4 4 GLN GLN B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 ASN 7 7 7 ASN ASN B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 THR 23 23 23 THR THR B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 PRO 26 26 26 PRO PRO B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 GLN 33 33 33 GLN GLN B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 TYR 38 38 38 TYR TYR B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 GLN 45 45 45 GLN GLN B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 ASN 48 48 48 ASN ASN B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 TYR 51 51 51 TYR TYR B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 GLU 59 59 59 GLU GLU B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 PRO 61 61 61 PRO PRO B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 MET 65 65 65 MET MET B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 MET 67 67 67 MET MET B . n B 1 68 GLN 68 68 68 GLN GLN B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 THR 70 70 70 THR THR B . n B 1 71 ARG 71 71 71 ARG ARG B . n B 1 72 GLY 72 72 72 GLY GLY B . n B 1 73 ASN 73 73 73 ASN ASN B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 ALA 77 77 77 ALA ALA B . n B 1 78 ALA 78 78 78 ALA ALA B . n B 1 79 LEU 79 79 79 LEU LEU B . n B 1 80 MET 80 80 80 MET MET B . n B 1 81 MET 81 81 81 MET MET B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 ILE 83 83 83 ILE ILE B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 LEU 88 88 88 LEU LEU B . n B 1 89 ARG 89 89 89 ARG ARG B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 LEU 92 92 92 LEU LEU B . n B 1 93 LYS 93 93 93 LYS LYS B . n B 1 94 LYS 94 94 94 LYS LYS B . n B 1 95 TYR 95 95 95 TYR TYR B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 MET 97 97 97 MET MET B . n B 1 98 ASN 98 98 98 ASN ASN B . n C 2 1 DA 1 1 1 DA DA C . n C 2 2 DA 2 2 2 DA DA C . n C 2 3 DA 3 3 3 DA DA C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DT 5 5 5 DT DT C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DG 7 7 7 DG DG C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DT 9 9 9 DT DT C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DI 12 12 12 DI DI C . n C 2 13 DI 13 13 13 DI DI C . n C 2 14 DC 14 14 14 DC DC C . n C 2 15 DI 15 15 15 DI DI C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DT 17 17 17 DT DT C . n C 2 18 DG 18 18 18 DG DG C . n C 2 19 DA 19 19 19 DA DA C . n C 2 20 DG 20 20 20 DG DG C . n C 2 21 DC 21 21 21 DC DC C . n C 2 22 DA 22 22 22 DA DA C . n C 2 23 DA 23 23 23 DA DA C . n C 2 24 DA 24 24 24 DA DA C . n C 2 25 DT 25 25 25 DT DT C . n C 2 26 DT 26 26 26 DT DT C . n C 2 27 DT 27 27 27 DT DT C . n D 3 1 DA 1 1 1 DA DA D . n D 3 2 DA 2 2 2 DA DA D . n D 3 3 DA 3 3 3 DA DA D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DT 5 5 5 DT DT D . n D 3 6 DT 6 6 6 DT DT D . n D 3 7 DG 7 7 7 DG DG D . n D 3 8 DC 8 8 8 DC DC D . n D 3 9 DT 9 9 9 DT DT D . n D 3 10 DC 10 10 10 DC DC D . n D 3 11 DA 11 11 11 DA DA D . n D 3 12 DI 12 12 12 DI DI D . n D 3 13 DC 13 13 13 DC DC D . n D 3 14 DI 14 14 14 DI DI D . n D 3 15 DC 15 15 15 DC DC D . n D 3 16 DC 16 16 16 DC DC D . n D 3 17 DC 17 17 17 DC DC D . n D 3 18 DA 18 18 18 DA DA D . n D 3 19 DA 19 19 19 DA DA D . n D 3 20 DA 20 20 20 DA DA D . n D 3 21 DC 21 21 21 DC DC D . n D 3 22 DA 22 22 22 DA DA D . n D 3 23 DA 23 23 23 DA DA D . n D 3 24 DA 24 24 24 DA DA D . n D 3 25 DT 25 25 25 DT DT D . n D 3 26 DT 26 26 26 DT DT D . n D 3 27 DT 27 27 27 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 101 3 HOH HOH A . E 4 HOH 2 102 4 HOH HOH A . F 4 HOH 1 101 1 HOH HOH B . F 4 HOH 2 102 2 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8740 ? 1 MORE -63 ? 1 'SSA (A^2)' 19120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-01 2 'Structure model' 1 1 2013-05-22 3 'Structure model' 1 2 2013-07-31 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 4IHY _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 7.540 _pdbx_phasing_MR.d_res_low_rotation 77.520 _pdbx_phasing_MR.d_res_high_translation 7.540 _pdbx_phasing_MR.d_res_low_translation 77.520 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.5.1 'Fri Jul 6 07:21:42 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.8.1_1168 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C DI 12 ? ? OP1 C DI 12 ? ? 1.611 1.480 0.131 0.020 N 2 1 P C DI 13 ? ? OP1 C DI 13 ? ? 1.612 1.480 0.132 0.020 N 3 1 P C DI 15 ? ? OP1 C DI 15 ? ? 1.609 1.480 0.129 0.020 N 4 1 P D DI 12 ? ? OP1 D DI 12 ? ? 1.607 1.480 0.127 0.020 N 5 1 P D DI 14 ? ? OP1 D DI 14 ? ? 1.617 1.480 0.137 0.020 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" C DA 1 ? ? "C3'" C DA 1 ? ? "C2'" C DA 1 ? ? 97.16 102.20 -5.04 0.70 N 2 1 "C3'" C DA 1 ? ? "C2'" C DA 1 ? ? "C1'" C DA 1 ? ? 95.58 102.40 -6.82 0.80 N 3 1 "O4'" C DA 1 ? ? "C1'" C DA 1 ? ? N9 C DA 1 ? ? 111.18 108.30 2.88 0.30 N 4 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? N1 C DT 5 ? ? 110.39 108.30 2.09 0.30 N 5 1 "O4'" C DT 10 ? ? "C1'" C DT 10 ? ? N1 C DT 10 ? ? 110.88 108.30 2.58 0.30 N 6 1 "O4'" C DG 11 ? ? "C1'" C DG 11 ? ? N9 C DG 11 ? ? 110.20 108.30 1.90 0.30 N 7 1 N3 C DT 17 ? ? C4 C DT 17 ? ? O4 C DT 17 ? ? 123.69 119.90 3.79 0.60 N 8 1 "O4'" C DG 20 ? ? "C4'" C DG 20 ? ? "C3'" C DG 20 ? ? 100.67 104.50 -3.83 0.40 N 9 1 "C1'" C DG 20 ? ? "O4'" C DG 20 ? ? "C4'" C DG 20 ? ? 101.38 110.10 -8.72 1.00 N 10 1 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.07 108.30 2.77 0.30 N 11 1 "O4'" C DC 21 ? ? "C1'" C DC 21 ? ? N1 C DC 21 ? ? 113.08 108.30 4.78 0.30 N 12 1 "C1'" C DT 25 ? ? "O4'" C DT 25 ? ? "C4'" C DT 25 ? ? 103.38 110.10 -6.72 1.00 N 13 1 "O4'" C DT 25 ? ? "C1'" C DT 25 ? ? N1 C DT 25 ? ? 112.68 108.30 4.38 0.30 N 14 1 "O4'" C DT 27 ? ? "C1'" C DT 27 ? ? N1 C DT 27 ? ? 111.25 108.30 2.95 0.30 N 15 1 "C4'" D DA 1 ? ? "C3'" D DA 1 ? ? "C2'" D DA 1 ? ? 96.53 102.20 -5.67 0.70 N 16 1 "C3'" D DA 1 ? ? "C2'" D DA 1 ? ? "C1'" D DA 1 ? ? 96.24 102.40 -6.16 0.80 N 17 1 "O4'" D DA 1 ? ? "C1'" D DA 1 ? ? N9 D DA 1 ? ? 111.04 108.30 2.74 0.30 N 18 1 "O4'" D DC 8 ? ? "C4'" D DC 8 ? ? "C3'" D DC 8 ? ? 100.48 104.50 -4.02 0.40 N 19 1 "C1'" D DC 8 ? ? "O4'" D DC 8 ? ? "C4'" D DC 8 ? ? 101.67 110.10 -8.43 1.00 N 20 1 "O4'" D DC 8 ? ? "C1'" D DC 8 ? ? N1 D DC 8 ? ? 111.89 108.30 3.59 0.30 N 21 1 "C3'" D DA 11 ? ? "C2'" D DA 11 ? ? "C1'" D DA 11 ? ? 97.56 102.40 -4.84 0.80 N 22 1 "O4'" D DA 11 ? ? "C1'" D DA 11 ? ? N9 D DA 11 ? ? 113.77 108.30 5.47 0.30 N 23 1 N1 D DC 17 ? ? C2 D DC 17 ? ? O2 D DC 17 ? ? 114.93 118.90 -3.97 0.60 N 24 1 "O4'" D DA 19 ? ? "C1'" D DA 19 ? ? N9 D DA 19 ? ? 110.27 108.30 1.97 0.30 N 25 1 "O4'" D DA 20 ? ? "C1'" D DA 20 ? ? N9 D DA 20 ? ? 110.19 108.30 1.89 0.30 N 26 1 "O4'" D DA 22 ? ? "C1'" D DA 22 ? ? N9 D DA 22 ? ? 110.14 108.30 1.84 0.30 N 27 1 "O4'" D DT 25 ? ? "C1'" D DT 25 ? ? N1 D DT 25 ? ? 113.24 108.30 4.94 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 19 ? ? -76.39 27.63 2 1 ASP A 20 ? ? 50.40 17.06 3 1 ASN A 43 ? ? -114.62 78.15 4 1 SER B 18 ? ? -58.93 8.79 5 1 ASP B 49 ? ? -156.38 37.69 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A PHE 2 ? A PHE 2 3 1 Y 1 A GLU 3 ? A GLU 3 4 1 Y 1 A GLN 4 ? A GLN 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A ASN 7 ? A ASN 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DI OP3 O N N 181 DI P P N N 182 DI OP1 O N N 183 DI OP2 O N N 184 DI "O5'" O N N 185 DI "C5'" C N N 186 DI "C4'" C N R 187 DI "O4'" O N N 188 DI "C3'" C N S 189 DI "O3'" O N N 190 DI "C2'" C N N 191 DI "C1'" C N R 192 DI N9 N Y N 193 DI C8 C Y N 194 DI N7 N Y N 195 DI C5 C Y N 196 DI C6 C N N 197 DI O6 O N N 198 DI N1 N N N 199 DI C2 C N N 200 DI N3 N N N 201 DI C4 C Y N 202 DI HOP3 H N N 203 DI HOP2 H N N 204 DI "H5'" H N N 205 DI "H5''" H N N 206 DI "H4'" H N N 207 DI "H3'" H N N 208 DI "HO3'" H N N 209 DI "H2'" H N N 210 DI "H2''" H N N 211 DI "H1'" H N N 212 DI H8 H N N 213 DI H1 H N N 214 DI H2 H N N 215 DT OP3 O N N 216 DT P P N N 217 DT OP1 O N N 218 DT OP2 O N N 219 DT "O5'" O N N 220 DT "C5'" C N N 221 DT "C4'" C N R 222 DT "O4'" O N N 223 DT "C3'" C N S 224 DT "O3'" O N N 225 DT "C2'" C N N 226 DT "C1'" C N R 227 DT N1 N N N 228 DT C2 C N N 229 DT O2 O N N 230 DT N3 N N N 231 DT C4 C N N 232 DT O4 O N N 233 DT C5 C N N 234 DT C7 C N N 235 DT C6 C N N 236 DT HOP3 H N N 237 DT HOP2 H N N 238 DT "H5'" H N N 239 DT "H5''" H N N 240 DT "H4'" H N N 241 DT "H3'" H N N 242 DT "HO3'" H N N 243 DT "H2'" H N N 244 DT "H2''" H N N 245 DT "H1'" H N N 246 DT H3 H N N 247 DT H71 H N N 248 DT H72 H N N 249 DT H73 H N N 250 DT H6 H N N 251 GLN N N N N 252 GLN CA C N S 253 GLN C C N N 254 GLN O O N N 255 GLN CB C N N 256 GLN CG C N N 257 GLN CD C N N 258 GLN OE1 O N N 259 GLN NE2 N N N 260 GLN OXT O N N 261 GLN H H N N 262 GLN H2 H N N 263 GLN HA H N N 264 GLN HB2 H N N 265 GLN HB3 H N N 266 GLN HG2 H N N 267 GLN HG3 H N N 268 GLN HE21 H N N 269 GLN HE22 H N N 270 GLN HXT H N N 271 GLU N N N N 272 GLU CA C N S 273 GLU C C N N 274 GLU O O N N 275 GLU CB C N N 276 GLU CG C N N 277 GLU CD C N N 278 GLU OE1 O N N 279 GLU OE2 O N N 280 GLU OXT O N N 281 GLU H H N N 282 GLU H2 H N N 283 GLU HA H N N 284 GLU HB2 H N N 285 GLU HB3 H N N 286 GLU HG2 H N N 287 GLU HG3 H N N 288 GLU HE2 H N N 289 GLU HXT H N N 290 GLY N N N N 291 GLY CA C N N 292 GLY C C N N 293 GLY O O N N 294 GLY OXT O N N 295 GLY H H N N 296 GLY H2 H N N 297 GLY HA2 H N N 298 GLY HA3 H N N 299 GLY HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 VAL N N N N 488 VAL CA C N S 489 VAL C C N N 490 VAL O O N N 491 VAL CB C N N 492 VAL CG1 C N N 493 VAL CG2 C N N 494 VAL OXT O N N 495 VAL H H N N 496 VAL H2 H N N 497 VAL HA H N N 498 VAL HB H N N 499 VAL HG11 H N N 500 VAL HG12 H N N 501 VAL HG13 H N N 502 VAL HG21 H N N 503 VAL HG22 H N N 504 VAL HG23 H N N 505 VAL HXT H N N 506 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DI OP3 P sing N N 182 DI OP3 HOP3 sing N N 183 DI P OP1 doub N N 184 DI P OP2 sing N N 185 DI P "O5'" sing N N 186 DI OP2 HOP2 sing N N 187 DI "O5'" "C5'" sing N N 188 DI "C5'" "C4'" sing N N 189 DI "C5'" "H5'" sing N N 190 DI "C5'" "H5''" sing N N 191 DI "C4'" "O4'" sing N N 192 DI "C4'" "C3'" sing N N 193 DI "C4'" "H4'" sing N N 194 DI "O4'" "C1'" sing N N 195 DI "C3'" "O3'" sing N N 196 DI "C3'" "C2'" sing N N 197 DI "C3'" "H3'" sing N N 198 DI "O3'" "HO3'" sing N N 199 DI "C2'" "C1'" sing N N 200 DI "C2'" "H2'" sing N N 201 DI "C2'" "H2''" sing N N 202 DI "C1'" N9 sing N N 203 DI "C1'" "H1'" sing N N 204 DI N9 C8 sing Y N 205 DI N9 C4 sing Y N 206 DI C8 N7 doub Y N 207 DI C8 H8 sing N N 208 DI N7 C5 sing Y N 209 DI C5 C6 sing N N 210 DI C5 C4 doub Y N 211 DI C6 O6 doub N N 212 DI C6 N1 sing N N 213 DI N1 C2 sing N N 214 DI N1 H1 sing N N 215 DI C2 N3 doub N N 216 DI C2 H2 sing N N 217 DI N3 C4 sing N N 218 DT OP3 P sing N N 219 DT OP3 HOP3 sing N N 220 DT P OP1 doub N N 221 DT P OP2 sing N N 222 DT P "O5'" sing N N 223 DT OP2 HOP2 sing N N 224 DT "O5'" "C5'" sing N N 225 DT "C5'" "C4'" sing N N 226 DT "C5'" "H5'" sing N N 227 DT "C5'" "H5''" sing N N 228 DT "C4'" "O4'" sing N N 229 DT "C4'" "C3'" sing N N 230 DT "C4'" "H4'" sing N N 231 DT "O4'" "C1'" sing N N 232 DT "C3'" "O3'" sing N N 233 DT "C3'" "C2'" sing N N 234 DT "C3'" "H3'" sing N N 235 DT "O3'" "HO3'" sing N N 236 DT "C2'" "C1'" sing N N 237 DT "C2'" "H2'" sing N N 238 DT "C2'" "H2''" sing N N 239 DT "C1'" N1 sing N N 240 DT "C1'" "H1'" sing N N 241 DT N1 C2 sing N N 242 DT N1 C6 sing N N 243 DT C2 O2 doub N N 244 DT C2 N3 sing N N 245 DT N3 C4 sing N N 246 DT N3 H3 sing N N 247 DT C4 O4 doub N N 248 DT C4 C5 sing N N 249 DT C5 C7 sing N N 250 DT C5 C6 doub N N 251 DT C7 H71 sing N N 252 DT C7 H72 sing N N 253 DT C7 H73 sing N N 254 DT C6 H6 sing N N 255 GLN N CA sing N N 256 GLN N H sing N N 257 GLN N H2 sing N N 258 GLN CA C sing N N 259 GLN CA CB sing N N 260 GLN CA HA sing N N 261 GLN C O doub N N 262 GLN C OXT sing N N 263 GLN CB CG sing N N 264 GLN CB HB2 sing N N 265 GLN CB HB3 sing N N 266 GLN CG CD sing N N 267 GLN CG HG2 sing N N 268 GLN CG HG3 sing N N 269 GLN CD OE1 doub N N 270 GLN CD NE2 sing N N 271 GLN NE2 HE21 sing N N 272 GLN NE2 HE22 sing N N 273 GLN OXT HXT sing N N 274 GLU N CA sing N N 275 GLU N H sing N N 276 GLU N H2 sing N N 277 GLU CA C sing N N 278 GLU CA CB sing N N 279 GLU CA HA sing N N 280 GLU C O doub N N 281 GLU C OXT sing N N 282 GLU CB CG sing N N 283 GLU CB HB2 sing N N 284 GLU CB HB3 sing N N 285 GLU CG CD sing N N 286 GLU CG HG2 sing N N 287 GLU CG HG3 sing N N 288 GLU CD OE1 doub N N 289 GLU CD OE2 sing N N 290 GLU OE2 HE2 sing N N 291 GLU OXT HXT sing N N 292 GLY N CA sing N N 293 GLY N H sing N N 294 GLY N H2 sing N N 295 GLY CA C sing N N 296 GLY CA HA2 sing N N 297 GLY CA HA3 sing N N 298 GLY C O doub N N 299 GLY C OXT sing N N 300 GLY OXT HXT sing N N 301 HOH O H1 sing N N 302 HOH O H2 sing N N 303 ILE N CA sing N N 304 ILE N H sing N N 305 ILE N H2 sing N N 306 ILE CA C sing N N 307 ILE CA CB sing N N 308 ILE CA HA sing N N 309 ILE C O doub N N 310 ILE C OXT sing N N 311 ILE CB CG1 sing N N 312 ILE CB CG2 sing N N 313 ILE CB HB sing N N 314 ILE CG1 CD1 sing N N 315 ILE CG1 HG12 sing N N 316 ILE CG1 HG13 sing N N 317 ILE CG2 HG21 sing N N 318 ILE CG2 HG22 sing N N 319 ILE CG2 HG23 sing N N 320 ILE CD1 HD11 sing N N 321 ILE CD1 HD12 sing N N 322 ILE CD1 HD13 sing N N 323 ILE OXT HXT sing N N 324 LEU N CA sing N N 325 LEU N H sing N N 326 LEU N H2 sing N N 327 LEU CA C sing N N 328 LEU CA CB sing N N 329 LEU CA HA sing N N 330 LEU C O doub N N 331 LEU C OXT sing N N 332 LEU CB CG sing N N 333 LEU CB HB2 sing N N 334 LEU CB HB3 sing N N 335 LEU CG CD1 sing N N 336 LEU CG CD2 sing N N 337 LEU CG HG sing N N 338 LEU CD1 HD11 sing N N 339 LEU CD1 HD12 sing N N 340 LEU CD1 HD13 sing N N 341 LEU CD2 HD21 sing N N 342 LEU CD2 HD22 sing N N 343 LEU CD2 HD23 sing N N 344 LEU OXT HXT sing N N 345 LYS N CA sing N N 346 LYS N H sing N N 347 LYS N H2 sing N N 348 LYS CA C sing N N 349 LYS CA CB sing N N 350 LYS CA HA sing N N 351 LYS C O doub N N 352 LYS C OXT sing N N 353 LYS CB CG sing N N 354 LYS CB HB2 sing N N 355 LYS CB HB3 sing N N 356 LYS CG CD sing N N 357 LYS CG HG2 sing N N 358 LYS CG HG3 sing N N 359 LYS CD CE sing N N 360 LYS CD HD2 sing N N 361 LYS CD HD3 sing N N 362 LYS CE NZ sing N N 363 LYS CE HE2 sing N N 364 LYS CE HE3 sing N N 365 LYS NZ HZ1 sing N N 366 LYS NZ HZ2 sing N N 367 LYS NZ HZ3 sing N N 368 LYS OXT HXT sing N N 369 MET N CA sing N N 370 MET N H sing N N 371 MET N H2 sing N N 372 MET CA C sing N N 373 MET CA CB sing N N 374 MET CA HA sing N N 375 MET C O doub N N 376 MET C OXT sing N N 377 MET CB CG sing N N 378 MET CB HB2 sing N N 379 MET CB HB3 sing N N 380 MET CG SD sing N N 381 MET CG HG2 sing N N 382 MET CG HG3 sing N N 383 MET SD CE sing N N 384 MET CE HE1 sing N N 385 MET CE HE2 sing N N 386 MET CE HE3 sing N N 387 MET OXT HXT sing N N 388 PHE N CA sing N N 389 PHE N H sing N N 390 PHE N H2 sing N N 391 PHE CA C sing N N 392 PHE CA CB sing N N 393 PHE CA HA sing N N 394 PHE C O doub N N 395 PHE C OXT sing N N 396 PHE CB CG sing N N 397 PHE CB HB2 sing N N 398 PHE CB HB3 sing N N 399 PHE CG CD1 doub Y N 400 PHE CG CD2 sing Y N 401 PHE CD1 CE1 sing Y N 402 PHE CD1 HD1 sing N N 403 PHE CD2 CE2 doub Y N 404 PHE CD2 HD2 sing N N 405 PHE CE1 CZ doub Y N 406 PHE CE1 HE1 sing N N 407 PHE CE2 CZ sing Y N 408 PHE CE2 HE2 sing N N 409 PHE CZ HZ sing N N 410 PHE OXT HXT sing N N 411 PRO N CA sing N N 412 PRO N CD sing N N 413 PRO N H sing N N 414 PRO CA C sing N N 415 PRO CA CB sing N N 416 PRO CA HA sing N N 417 PRO C O doub N N 418 PRO C OXT sing N N 419 PRO CB CG sing N N 420 PRO CB HB2 sing N N 421 PRO CB HB3 sing N N 422 PRO CG CD sing N N 423 PRO CG HG2 sing N N 424 PRO CG HG3 sing N N 425 PRO CD HD2 sing N N 426 PRO CD HD3 sing N N 427 PRO OXT HXT sing N N 428 SER N CA sing N N 429 SER N H sing N N 430 SER N H2 sing N N 431 SER CA C sing N N 432 SER CA CB sing N N 433 SER CA HA sing N N 434 SER C O doub N N 435 SER C OXT sing N N 436 SER CB OG sing N N 437 SER CB HB2 sing N N 438 SER CB HB3 sing N N 439 SER OG HG sing N N 440 SER OXT HXT sing N N 441 THR N CA sing N N 442 THR N H sing N N 443 THR N H2 sing N N 444 THR CA C sing N N 445 THR CA CB sing N N 446 THR CA HA sing N N 447 THR C O doub N N 448 THR C OXT sing N N 449 THR CB OG1 sing N N 450 THR CB CG2 sing N N 451 THR CB HB sing N N 452 THR OG1 HG1 sing N N 453 THR CG2 HG21 sing N N 454 THR CG2 HG22 sing N N 455 THR CG2 HG23 sing N N 456 THR OXT HXT sing N N 457 TYR N CA sing N N 458 TYR N H sing N N 459 TYR N H2 sing N N 460 TYR CA C sing N N 461 TYR CA CB sing N N 462 TYR CA HA sing N N 463 TYR C O doub N N 464 TYR C OXT sing N N 465 TYR CB CG sing N N 466 TYR CB HB2 sing N N 467 TYR CB HB3 sing N N 468 TYR CG CD1 doub Y N 469 TYR CG CD2 sing Y N 470 TYR CD1 CE1 sing Y N 471 TYR CD1 HD1 sing N N 472 TYR CD2 CE2 doub Y N 473 TYR CD2 HD2 sing N N 474 TYR CE1 CZ doub Y N 475 TYR CE1 HE1 sing N N 476 TYR CE2 CZ sing Y N 477 TYR CE2 HE2 sing N N 478 TYR CZ OH sing N N 479 TYR OH HH sing N N 480 TYR OXT HXT sing N N 481 VAL N CA sing N N 482 VAL N H sing N N 483 VAL N H2 sing N N 484 VAL CA C sing N N 485 VAL CA CB sing N N 486 VAL CA HA sing N N 487 VAL C O doub N N 488 VAL C OXT sing N N 489 VAL CB CG1 sing N N 490 VAL CB CG2 sing N N 491 VAL CB HB sing N N 492 VAL CG1 HG11 sing N N 493 VAL CG1 HG12 sing N N 494 VAL CG1 HG13 sing N N 495 VAL CG2 HG21 sing N N 496 VAL CG2 HG22 sing N N 497 VAL CG2 HG23 sing N N 498 VAL OXT HXT sing N N 499 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4IHY 'double helix' 4IHY 'b-form double helix' 4IHY 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DA 1 1_555 D DT 27 1_555 0.651 -0.041 -0.180 8.527 -10.472 -5.467 1 C_DA1:DT27_D C 1 ? D 27 ? 20 1 1 C DA 2 1_555 D DT 26 1_555 -0.118 -0.152 -0.331 1.647 -18.381 -0.531 2 C_DA2:DT26_D C 2 ? D 26 ? 20 1 1 C DA 3 1_555 D DT 25 1_555 -0.356 -0.263 0.172 6.431 -15.278 -2.802 3 C_DA3:DT25_D C 3 ? D 25 ? 20 1 1 C DT 4 1_555 D DA 24 1_555 0.305 -0.286 0.499 -0.777 -14.433 -2.319 4 C_DT4:DA24_D C 4 ? D 24 ? 20 1 1 C DT 5 1_555 D DA 23 1_555 0.397 -0.246 0.593 -6.498 -16.544 -4.229 5 C_DT5:DA23_D C 5 ? D 23 ? 20 1 1 C DT 6 1_555 D DA 22 1_555 0.568 -0.338 0.730 -18.160 -20.579 -7.079 6 C_DT6:DA22_D C 6 ? D 22 ? 20 1 1 C DG 7 1_555 D DC 21 1_555 -0.263 -0.129 0.034 -6.099 -7.068 -0.877 7 C_DG7:DC21_D C 7 ? D 21 ? 19 1 1 C DT 8 1_555 D DA 20 1_555 0.328 -0.275 0.216 -8.702 -20.723 -1.348 8 C_DT8:DA20_D C 8 ? D 20 ? 20 1 1 C DT 9 1_555 D DA 19 1_555 -0.171 -0.192 0.631 -15.497 -16.076 -0.652 9 C_DT9:DA19_D C 9 ? D 19 ? 20 1 1 C DT 10 1_555 D DA 18 1_555 0.582 -0.255 0.635 -17.112 -12.885 -3.994 10 C_DT10:DA18_D C 10 ? D 18 ? 20 1 1 C DG 11 1_555 D DC 17 1_555 -0.645 0.071 0.014 13.788 -15.680 11.387 11 C_DG11:DC17_D C 11 ? D 17 ? ? 1 1 C DI 12 1_555 D DC 16 1_555 -0.331 -0.093 0.234 4.049 -11.349 1.604 12 C_DI12:DC16_D C 12 ? D 16 ? ? 1 1 C DI 13 1_555 D DC 15 1_555 0.706 -0.061 0.101 2.921 -12.128 3.934 13 C_DI13:DC15_D C 13 ? D 15 ? ? 1 1 C DC 14 1_555 D DI 14 1_555 1.166 -0.426 0.269 -1.771 -11.509 2.261 14 C_DC14:DI14_D C 14 ? D 14 ? ? 1 1 C DI 15 1_555 D DC 13 1_555 0.724 -0.064 0.187 -4.222 -5.323 2.811 15 C_DI15:DC13_D C 15 ? D 13 ? ? 1 1 C DC 16 1_555 D DI 12 1_555 0.228 -0.071 0.023 -4.718 -6.427 0.374 16 C_DC16:DI12_D C 16 ? D 12 ? ? 1 1 C DT 17 1_555 D DA 11 1_555 0.452 -0.254 -0.368 -14.799 -12.758 0.240 17 C_DT17:DA11_D C 17 ? D 11 ? 20 1 1 C DG 18 1_555 D DC 10 1_555 -0.725 -0.215 0.335 19.055 -14.861 1.635 18 C_DG18:DC10_D C 18 ? D 10 ? 19 1 1 C DA 19 1_555 D DT 9 1_555 -0.170 -0.232 0.739 13.765 -18.734 -6.155 19 C_DA19:DT9_D C 19 ? D 9 ? 20 1 1 C DG 20 1_555 D DC 8 1_555 -0.234 -0.265 0.915 6.108 -13.953 -4.826 20 C_DG20:DC8_D C 20 ? D 8 ? 19 1 1 C DC 21 1_555 D DG 7 1_555 0.601 -0.237 0.154 2.237 -12.527 -1.389 21 C_DC21:DG7_D C 21 ? D 7 ? 19 1 1 C DA 22 1_555 D DT 6 1_555 -0.433 -0.226 0.941 16.401 -7.328 -5.401 22 C_DA22:DT6_D C 22 ? D 6 ? 20 1 1 C DA 23 1_555 D DT 5 1_555 0.248 -0.013 0.593 6.916 -16.757 1.538 23 C_DA23:DT5_D C 23 ? D 5 ? 20 1 1 C DA 24 1_555 D DT 4 1_555 -0.239 -0.219 0.393 5.544 -9.528 -1.733 24 C_DA24:DT4_D C 24 ? D 4 ? 20 1 1 C DT 25 1_555 D DA 3 1_555 -0.723 -0.175 0.230 -9.323 -20.917 -3.872 25 C_DT25:DA3_D C 25 ? D 3 ? 20 1 1 C DT 26 1_555 D DA 2 1_555 -0.797 -0.141 -0.018 -5.167 -9.110 -1.916 26 C_DT26:DA2_D C 26 ? D 2 ? 20 1 1 C DT 27 1_555 D DA 1 1_555 0.256 -0.147 -0.263 -2.598 -8.948 -3.578 27 C_DT27:DA1_D C 27 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DA 1 1_555 D DT 27 1_555 C DA 2 1_555 D DT 26 1_555 0.081 -0.192 3.315 0.499 -3.718 36.517 0.211 -0.060 3.319 -5.914 -0.794 36.703 1 CC_DA1DA2:DT26DT27_DD C 1 ? D 27 ? C 2 ? D 26 ? 1 C DA 2 1_555 D DT 26 1_555 C DA 3 1_555 D DT 25 1_555 0.027 -0.281 3.042 -5.708 -4.967 35.436 0.200 -0.794 3.012 -8.047 9.247 36.210 2 CC_DA2DA3:DT25DT26_DD C 2 ? D 26 ? C 3 ? D 25 ? 1 C DA 3 1_555 D DT 25 1_555 C DT 4 1_555 D DA 24 1_555 0.371 -1.012 3.414 -0.125 -5.639 37.890 -0.790 -0.582 3.522 -8.625 0.190 38.292 3 CC_DA3DT4:DA24DT25_DD C 3 ? D 25 ? C 4 ? D 24 ? 1 C DT 4 1_555 D DA 24 1_555 C DT 5 1_555 D DA 23 1_555 0.131 -0.612 3.313 1.415 -5.088 35.822 -0.251 -0.006 3.368 -8.218 -2.285 36.196 4 CC_DT4DT5:DA23DA24_DD C 4 ? D 24 ? C 5 ? D 23 ? 1 C DT 5 1_555 D DA 23 1_555 C DT 6 1_555 D DA 22 1_555 -0.075 -0.721 3.381 1.081 0.825 41.073 -1.119 0.228 3.363 1.175 -1.540 41.094 5 CC_DT5DT6:DA22DA23_DD C 5 ? D 23 ? C 6 ? D 22 ? 1 C DT 6 1_555 D DA 22 1_555 C DG 7 1_555 D DC 21 1_555 0.317 0.152 3.015 2.632 1.247 30.483 0.059 -0.118 3.034 2.364 -4.991 30.618 6 CC_DT6DG7:DC21DA22_DD C 6 ? D 22 ? C 7 ? D 21 ? 1 C DG 7 1_555 D DC 21 1_555 C DT 8 1_555 D DA 20 1_555 0.298 -0.654 3.311 -1.240 10.593 30.991 -2.952 -0.739 2.922 19.129 2.239 32.732 7 CC_DG7DT8:DA20DC21_DD C 7 ? D 21 ? C 8 ? D 20 ? 1 C DT 8 1_555 D DA 20 1_555 C DT 9 1_555 D DA 19 1_555 -0.304 -0.712 3.443 -2.607 3.808 28.703 -2.291 0.009 3.336 7.619 5.216 29.064 8 CC_DT8DT9:DA19DA20_DD C 8 ? D 20 ? C 9 ? D 19 ? 1 C DT 9 1_555 D DA 19 1_555 C DT 10 1_555 D DA 18 1_555 -0.230 -0.831 3.309 0.706 -0.753 36.030 -1.234 0.473 3.320 -1.218 -1.141 36.044 9 CC_DT9DT10:DA18DA19_DD C 9 ? D 19 ? C 10 ? D 18 ? 1 C DT 10 1_555 D DA 18 1_555 C DG 11 1_555 D DC 17 1_555 1.118 0.551 2.818 9.079 7.609 25.107 -0.589 -0.258 3.066 16.391 -19.555 27.720 10 CC_DT10DG11:DC17DA18_DD C 10 ? D 18 ? C 11 ? D 17 ? 1 C DG 11 1_555 D DC 17 1_555 C DI 12 1_555 D DC 16 1_555 -0.880 -0.346 3.345 -4.703 0.314 36.672 -0.589 0.729 3.425 0.496 7.437 36.963 11 CC_DG11DI12:DC16DC17_DD C 11 ? D 17 ? C 12 ? D 16 ? 1 C DI 12 1_555 D DC 16 1_555 C DI 13 1_555 D DC 15 1_555 -0.246 0.081 3.265 0.865 -3.452 45.412 0.407 0.394 3.246 -4.463 -1.118 45.544 12 CC_DI12DI13:DC15DC16_DD C 12 ? D 16 ? C 13 ? D 15 ? 1 C DI 13 1_555 D DC 15 1_555 C DC 14 1_555 D DI 14 1_555 -0.043 -0.398 3.367 -2.714 -4.668 37.726 0.003 -0.291 3.385 -7.174 4.171 38.097 13 CC_DI13DC14:DI14DC15_DD C 13 ? D 15 ? C 14 ? D 14 ? 1 C DC 14 1_555 D DI 14 1_555 C DI 15 1_555 D DC 13 1_555 -0.183 -0.362 3.181 0.325 -1.856 35.561 -0.328 0.345 3.194 -3.036 -0.532 35.609 14 CC_DC14DI15:DC13DI14_DD C 14 ? D 14 ? C 15 ? D 13 ? 1 C DI 15 1_555 D DC 13 1_555 C DC 16 1_555 D DI 12 1_555 -0.020 -0.211 3.305 2.262 -8.221 35.430 0.826 0.352 3.264 -13.273 -3.652 36.409 15 CC_DI15DC16:DI12DC13_DD C 15 ? D 13 ? C 16 ? D 12 ? 1 C DC 16 1_555 D DI 12 1_555 C DT 17 1_555 D DA 11 1_555 0.612 -0.433 3.348 7.194 2.425 36.786 -1.002 0.025 3.370 3.793 -11.253 37.534 16 CC_DC16DT17:DA11DI12_DD C 16 ? D 12 ? C 17 ? D 11 ? 1 C DT 17 1_555 D DA 11 1_555 C DG 18 1_555 D DC 10 1_555 -0.307 0.689 2.755 -7.405 8.217 24.117 -0.437 -1.077 2.806 18.473 16.648 26.499 17 CC_DT17DG18:DC10DA11_DD C 17 ? D 11 ? C 18 ? D 10 ? 1 C DG 18 1_555 D DC 10 1_555 C DA 19 1_555 D DT 9 1_555 -0.023 -0.909 3.300 -4.513 2.132 34.729 -1.829 -0.639 3.218 3.549 7.513 35.075 18 CC_DG18DA19:DT9DC10_DD C 18 ? D 10 ? C 19 ? D 9 ? 1 C DA 19 1_555 D DT 9 1_555 C DG 20 1_555 D DC 8 1_555 0.481 -0.959 3.356 -2.255 4.035 32.443 -2.398 -1.243 3.177 7.176 4.011 32.761 19 CC_DA19DG20:DC8DT9_DD C 19 ? D 9 ? C 20 ? D 8 ? 1 C DG 20 1_555 D DC 8 1_555 C DC 21 1_555 D DG 7 1_555 -0.483 -0.833 3.363 7.353 7.878 32.761 -2.616 1.943 2.918 13.519 -12.617 34.442 20 CC_DG20DC21:DG7DC8_DD C 20 ? D 8 ? C 21 ? D 7 ? 1 C DC 21 1_555 D DG 7 1_555 C DA 22 1_555 D DT 6 1_555 -0.422 0.050 2.804 -8.427 3.333 31.292 -0.420 -0.536 2.810 6.022 15.228 32.546 21 CC_DC21DA22:DT6DG7_DD C 21 ? D 7 ? C 22 ? D 6 ? 1 C DA 22 1_555 D DT 6 1_555 C DA 23 1_555 D DT 5 1_555 0.009 -0.579 3.448 1.912 -6.109 41.079 -0.125 0.204 3.492 -8.642 -2.704 41.553 22 CC_DA22DA23:DT5DT6_DD C 22 ? D 6 ? C 23 ? D 5 ? 1 C DA 23 1_555 D DT 5 1_555 C DA 24 1_555 D DT 4 1_555 -0.158 -0.948 3.074 -2.713 -0.786 30.691 -1.639 -0.202 3.099 -1.481 5.111 30.818 23 CC_DA23DA24:DT4DT5_DD C 23 ? D 5 ? C 24 ? D 4 ? 1 C DA 24 1_555 D DT 4 1_555 C DT 25 1_555 D DA 3 1_555 -0.354 -0.842 3.607 0.251 -8.236 32.675 0.069 0.658 3.701 -14.356 -0.438 33.671 24 CC_DA24DT25:DA3DT4_DD C 24 ? D 4 ? C 25 ? D 3 ? 1 C DT 25 1_555 D DA 3 1_555 C DT 26 1_555 D DA 2 1_555 -0.156 -0.627 3.094 2.499 -3.986 37.335 -0.477 0.551 3.125 -6.197 -3.884 37.620 25 CC_DT25DT26:DA2DA3_DD C 25 ? D 3 ? C 26 ? D 2 ? 1 C DT 26 1_555 D DA 2 1_555 C DT 27 1_555 D DA 1 1_555 0.309 -0.260 3.095 2.963 -8.780 44.821 0.399 -0.150 3.104 -11.371 -3.837 45.720 26 CC_DT26DT27:DA1DA2_DD C 26 ? D 2 ? C 27 ? D 1 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3IV5 _pdbx_initial_refinement_model.details 'PDB ENTRY 3IV5' #