HEADER TRANSFERASE/TRANSFERASE INHIBITOR 13-JAN-13 4IQT TITLE TDT CORE IN COMPLEX WITH INHIBITOR 6-[4-(3-FLUOROBENZOYL)-1H-PYRROL-2- TITLE 2 YL]-2-HYDROXY-4-OXOHEXA-2,5-DIENOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA NUCLEOTIDYLEXOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEE REMARK 999; COMPND 5 SYNONYM: TERMINAL ADDITION ENZYME, TERMINAL COMPND 6 DEOXYNUCLEOTIDYLTRANSFERASE, TDT, TERMINAL TRANSFERASE; COMPND 7 EC: 2.7.7.31; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DNTT, TDT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TERMINAL TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.GOUGE,M.DELARUE REVDAT 4 20-SEP-23 4IQT 1 REMARK SEQADV REVDAT 3 26-JUL-17 4IQT 1 SOURCE REMARK REVDAT 2 09-OCT-13 4IQT 1 JRNL REVDAT 1 04-SEP-13 4IQT 0 JRNL AUTH R.COSTI,G.CUZZUCOLI CRUCITTI,L.PESCATORI,A.MESSORE, JRNL AUTH 2 L.SCIPIONE,S.TORTORELLA,A.AMOROSO,E.CRESPAN,P.CAMPIGLIA, JRNL AUTH 3 B.MARESCA,A.PORTA,I.GRANATA,E.NOVELLINO,J.GOUGE,M.DELARUE, JRNL AUTH 4 G.MAGA,R.DI SANTO JRNL TITL NEW NUCLEOTIDE-COMPETITIVE NON-NUCLEOSIDE INHIBITORS OF JRNL TITL 2 TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE: DISCOVERY, JRNL TITL 3 CHARACTERIZATION, AND CRYSTAL STRUCTURE IN COMPLEX WITH THE JRNL TITL 4 TARGET. JRNL REF J.MED.CHEM. V. 56 7431 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23968551 JRNL DOI 10.1021/JM4010187 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 14210 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 719 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.85 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2919 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2095 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2771 REMARK 3 BIN R VALUE (WORKING SET) : 0.2059 REMARK 3 BIN FREE R VALUE : 0.2754 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 148 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 171 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.69380 REMARK 3 B22 (A**2) : 3.78510 REMARK 3 B33 (A**2) : -11.47890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.324 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.762 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.283 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.564 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.277 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2899 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3907 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1352 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 72 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 435 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2899 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 371 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3279 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.87 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.87 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|149 - 240} REMARK 3 ORIGIN FOR THE GROUP (A): 27.6485 11.6596 5.6753 REMARK 3 T TENSOR REMARK 3 T11: -0.1858 T22: -0.1270 REMARK 3 T33: 0.1180 T12: -0.0073 REMARK 3 T13: -0.0005 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 3.7849 L22: 2.5851 REMARK 3 L33: 2.3660 L12: 0.3576 REMARK 3 L13: 0.0715 L23: 0.9407 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: 0.1296 S13: 0.1321 REMARK 3 S21: -0.2442 S22: -0.0704 S23: 0.0073 REMARK 3 S31: -0.2547 S32: 0.0918 S33: 0.1346 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|241 - 450} REMARK 3 ORIGIN FOR THE GROUP (A): 11.9875 11.2113 30.2930 REMARK 3 T TENSOR REMARK 3 T11: -0.1621 T22: -0.1381 REMARK 3 T33: 0.0641 T12: 0.0088 REMARK 3 T13: 0.0549 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.5841 L22: 3.1434 REMARK 3 L33: 0.7078 L12: 0.5077 REMARK 3 L13: 0.1377 L23: 0.3191 REMARK 3 S TENSOR REMARK 3 S11: -0.0559 S12: -0.1926 S13: -0.0525 REMARK 3 S21: 0.2628 S22: 0.0502 S23: 0.3065 REMARK 3 S31: 0.0195 S32: -0.1749 S33: 0.0057 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|451 - 510} REMARK 3 ORIGIN FOR THE GROUP (A): 7.6374 -1.2241 8.7528 REMARK 3 T TENSOR REMARK 3 T11: -0.2108 T22: -0.1165 REMARK 3 T33: 0.2138 T12: -0.0073 REMARK 3 T13: -0.0255 T23: -0.0688 REMARK 3 L TENSOR REMARK 3 L11: 6.9737 L22: 0.7859 REMARK 3 L33: 1.5734 L12: 0.3147 REMARK 3 L13: 1.1333 L23: 0.5223 REMARK 3 S TENSOR REMARK 3 S11: 0.0540 S12: 0.2635 S13: -0.3253 REMARK 3 S21: -0.1547 S22: -0.2528 S23: 0.2065 REMARK 3 S31: -0.0630 S32: -0.1009 S33: 0.1988 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IQT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953720 REMARK 200 MONOCHROMATOR : CHANNEL CUT CRYOGENICALLY COOLED REMARK 200 CRYSTAL REMARK 200 OPTICS : KIRKPATRICK-BAEZ PAIR OF BI REMARK 200 -MORPH MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14216 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.50600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1JMS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG4000, 200 MM AMMONIUM FORMATE, REMARK 280 100 MM MES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.48500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.43000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.48500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.43000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 130 REMARK 465 MET A 131 REMARK 465 SER A 132 REMARK 465 PRO A 133 REMARK 465 SER A 134 REMARK 465 PRO A 135 REMARK 465 VAL A 136 REMARK 465 PRO A 137 REMARK 465 GLY A 138 REMARK 465 SER A 139 REMARK 465 GLN A 140 REMARK 465 ASN A 141 REMARK 465 VAL A 142 REMARK 465 PRO A 143 REMARK 465 ALA A 144 REMARK 465 PRO A 145 REMARK 465 ALA A 146 REMARK 465 VAL A 147 REMARK 465 LYS A 148 REMARK 465 LYS A 394 REMARK 465 VAL A 395 REMARK 465 SER A 420 REMARK 465 GLY A 421 REMARK 465 GLN A 422 REMARK 465 GLN A 423 REMARK 465 MET A 511 REMARK 465 GLY A 512 REMARK 465 SER A 513 REMARK 465 SER A 514 REMARK 465 HIS A 515 REMARK 465 HIS A 516 REMARK 465 HIS A 517 REMARK 465 HIS A 518 REMARK 465 HIS A 519 REMARK 465 HIS A 520 REMARK 465 SER A 521 REMARK 465 SER A 522 REMARK 465 GLY A 523 REMARK 465 LEU A 524 REMARK 465 VAL A 525 REMARK 465 PRO A 526 REMARK 465 ARG A 527 REMARK 465 GLY A 528 REMARK 465 SER A 529 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 GLU A 212 CG CD OE1 OE2 REMARK 470 LYS A 220 CD CE NZ REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 GLU A 233 CD OE1 OE2 REMARK 470 LYS A 250 CD CE NZ REMARK 470 GLU A 297 CD OE1 OE2 REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 GLU A 355 CG CD OE1 OE2 REMARK 470 ASP A 356 CG OD1 OD2 REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 ARG A 393 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 396 CG OD1 OD2 REMARK 470 GLU A 418 CG CD OE1 OE2 REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 GLU A 487 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 331 -153.86 -115.38 REMARK 500 ASN A 509 44.25 -84.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1FO A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IQU RELATED DB: PDB REMARK 900 RELATED ID: 4IQV RELATED DB: PDB REMARK 900 RELATED ID: 4IQW RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEIN FRAGMENT IS THE CATALYTIC CORE OF THE TDT-S (TDT-SMALL) REMARK 999 ISOFORM (UNP RESIDUES 132-482, 503-530). DBREF 4IQT A 132 482 UNP P09838 TDT_MOUSE 132 482 DBREF 4IQT A 483 510 UNP P09838 TDT_MOUSE 503 530 SEQADV 4IQT HIS A 130 UNP P09838 EXPRESSION TAG SEQADV 4IQT MET A 131 UNP P09838 EXPRESSION TAG SEQADV 4IQT MET A 511 UNP P09838 EXPRESSION TAG SEQADV 4IQT GLY A 512 UNP P09838 EXPRESSION TAG SEQADV 4IQT SER A 513 UNP P09838 EXPRESSION TAG SEQADV 4IQT SER A 514 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 515 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 516 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 517 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 518 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 519 UNP P09838 EXPRESSION TAG SEQADV 4IQT HIS A 520 UNP P09838 EXPRESSION TAG SEQADV 4IQT SER A 521 UNP P09838 EXPRESSION TAG SEQADV 4IQT SER A 522 UNP P09838 EXPRESSION TAG SEQADV 4IQT GLY A 523 UNP P09838 EXPRESSION TAG SEQADV 4IQT LEU A 524 UNP P09838 EXPRESSION TAG SEQADV 4IQT VAL A 525 UNP P09838 EXPRESSION TAG SEQADV 4IQT PRO A 526 UNP P09838 EXPRESSION TAG SEQADV 4IQT ARG A 527 UNP P09838 EXPRESSION TAG SEQADV 4IQT GLY A 528 UNP P09838 EXPRESSION TAG SEQADV 4IQT SER A 529 UNP P09838 EXPRESSION TAG SEQRES 1 A 400 HIS MET SER PRO SER PRO VAL PRO GLY SER GLN ASN VAL SEQRES 2 A 400 PRO ALA PRO ALA VAL LYS LYS ILE SER GLN TYR ALA CYS SEQRES 3 A 400 GLN ARG ARG THR THR LEU ASN ASN TYR ASN GLN LEU PHE SEQRES 4 A 400 THR ASP ALA LEU ASP ILE LEU ALA GLU ASN ASP GLU LEU SEQRES 5 A 400 ARG GLU ASN GLU GLY SER CYS LEU ALA PHE MET ARG ALA SEQRES 6 A 400 SER SER VAL LEU LYS SER LEU PRO PHE PRO ILE THR SER SEQRES 7 A 400 MET LYS ASP THR GLU GLY ILE PRO CYS LEU GLY ASP LYS SEQRES 8 A 400 VAL LYS SER ILE ILE GLU GLY ILE ILE GLU ASP GLY GLU SEQRES 9 A 400 SER SER GLU ALA LYS ALA VAL LEU ASN ASP GLU ARG TYR SEQRES 10 A 400 LYS SER PHE LYS LEU PHE THR SER VAL PHE GLY VAL GLY SEQRES 11 A 400 LEU LYS THR ALA GLU LYS TRP PHE ARG MET GLY PHE ARG SEQRES 12 A 400 THR LEU SER LYS ILE GLN SER ASP LYS SER LEU ARG PHE SEQRES 13 A 400 THR GLN MET GLN LYS ALA GLY PHE LEU TYR TYR GLU ASP SEQRES 14 A 400 LEU VAL SER CYS VAL ASN ARG PRO GLU ALA GLU ALA VAL SEQRES 15 A 400 SER MET LEU VAL LYS GLU ALA VAL VAL THR PHE LEU PRO SEQRES 16 A 400 ASP ALA LEU VAL THR MET THR GLY GLY PHE ARG ARG GLY SEQRES 17 A 400 LYS MET THR GLY HIS ASP VAL ASP PHE LEU ILE THR SER SEQRES 18 A 400 PRO GLU ALA THR GLU ASP GLU GLU GLN GLN LEU LEU HIS SEQRES 19 A 400 LYS VAL THR ASP PHE TRP LYS GLN GLN GLY LEU LEU LEU SEQRES 20 A 400 TYR CYS ASP ILE LEU GLU SER THR PHE GLU LYS PHE LYS SEQRES 21 A 400 GLN PRO SER ARG LYS VAL ASP ALA LEU ASP HIS PHE GLN SEQRES 22 A 400 LYS CYS PHE LEU ILE LEU LYS LEU ASP HIS GLY ARG VAL SEQRES 23 A 400 HIS SER GLU LYS SER GLY GLN GLN GLU GLY LYS GLY TRP SEQRES 24 A 400 LYS ALA ILE ARG VAL ASP LEU VAL MET CYS PRO TYR ASP SEQRES 25 A 400 ARG ARG ALA PHE ALA LEU LEU GLY TRP THR GLY SER ARG SEQRES 26 A 400 GLN PHE GLU ARG ASP LEU ARG ARG TYR ALA THR HIS GLU SEQRES 27 A 400 ARG LYS MET MET LEU ASP ASN HIS ALA LEU TYR ASP ARG SEQRES 28 A 400 THR LYS ARG VAL PHE LEU GLU ALA GLU SER GLU GLU GLU SEQRES 29 A 400 ILE PHE ALA HIS LEU GLY LEU ASP TYR ILE GLU PRO TRP SEQRES 30 A 400 GLU ARG ASN ALA MET GLY SER SER HIS HIS HIS HIS HIS SEQRES 31 A 400 HIS SER SER GLY LEU VAL PRO ARG GLY SER HET 1FO A 601 24 HETNAM 1FO 6-[4-(3-FLUOROBENZOYL)-1H-PYRROL-2-YL]-2-HYDROXY-4- HETNAM 2 1FO OXOHEXA-2,5-DIENOIC ACID FORMUL 2 1FO C17 H12 F N O5 FORMUL 3 HOH *171(H2 O) HELIX 1 1 TYR A 153 ARG A 157 5 5 HELIX 2 2 ASN A 165 ARG A 182 1 18 HELIX 3 3 ASN A 184 SER A 200 1 17 HELIX 4 4 SER A 207 GLU A 212 5 6 HELIX 5 5 GLY A 218 GLY A 232 1 15 HELIX 6 6 SER A 234 ASP A 243 1 10 HELIX 7 7 ASP A 243 SER A 254 1 12 HELIX 8 8 GLY A 259 MET A 269 1 11 HELIX 9 9 THR A 273 ASP A 280 1 8 HELIX 10 10 THR A 286 TYR A 295 1 10 HELIX 11 11 TYR A 295 SER A 301 1 7 HELIX 12 12 ARG A 305 LEU A 323 1 19 HELIX 13 13 THR A 331 ARG A 336 1 6 HELIX 14 14 THR A 354 GLN A 372 1 19 HELIX 15 15 GLY A 413 VAL A 415 5 3 HELIX 16 16 PRO A 439 ASP A 441 5 3 HELIX 17 17 ARG A 442 GLY A 452 1 11 HELIX 18 18 SER A 453 LYS A 469 1 17 HELIX 19 19 SER A 490 LEU A 498 1 9 HELIX 20 20 GLU A 504 ARG A 508 5 5 SHEET 1 A 2 VAL A 303 ASN A 304 0 SHEET 2 A 2 THR A 340 GLY A 341 -1 O GLY A 341 N VAL A 303 SHEET 1 B 5 LEU A 327 MET A 330 0 SHEET 2 B 5 VAL A 344 THR A 349 -1 O THR A 349 N LEU A 327 SHEET 3 B 5 TRP A 428 MET A 437 1 O VAL A 436 N ILE A 348 SHEET 4 B 5 GLN A 402 ASP A 411 -1 N LEU A 408 O ILE A 431 SHEET 5 B 5 LEU A 375 LEU A 381 -1 N LEU A 381 O LYS A 403 SHEET 1 C 3 MET A 470 LEU A 472 0 SHEET 2 C 3 LEU A 477 ASP A 479 -1 O TYR A 478 N MET A 471 SHEET 3 C 3 VAL A 484 PHE A 485 -1 O VAL A 484 N ASP A 479 CISPEP 1 GLY A 452 SER A 453 0 0.81 SITE 1 AC1 17 MET A 192 THR A 331 GLY A 332 GLY A 333 SITE 2 AC1 17 PHE A 334 ARG A 336 GLY A 341 ASP A 343 SITE 3 AC1 17 VAL A 344 ASP A 345 SER A 453 ARG A 454 SITE 4 AC1 17 GLN A 455 ARG A 458 ALA A 510 HOH A 706 SITE 5 AC1 17 HOH A 819 CRYST1 46.970 84.860 114.430 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008739 0.00000