HEADER PROTEIN TRANSPORT 14-FEB-13 4J86 TITLE CRYSTAL STRUCTURE OF BETA'-COP/YWBP1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: COATOMER SUBUNIT BETA'; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA'-COAT PROTEIN, BETA'-COP; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN COMPND 7 GLYCOSYLTRANSFERASE SUBUNIT WBP1; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: UNP RESIDUES 425-430; COMPND 10 SYNONYM: OLIGOSACCHARYL TRANSFERASE SUBUNIT WBP1, OLIGOSACCHARYL COMPND 11 TRANSFERASE SUBUNIT BETA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 8 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 9 ORGANISM_TAXID: 4932 KEYWDS BETA PROPELLER, DILYSINE MOTIF, ER RETRIEVAL, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR W.MA,J.GOLDBERG REVDAT 3 28-FEB-24 4J86 1 SEQADV REVDAT 2 17-APR-13 4J86 1 JRNL REVDAT 1 27-MAR-13 4J86 0 JRNL AUTH W.MA,J.GOLDBERG JRNL TITL RULES FOR THE RECOGNITION OF DILYSINE RETRIEVAL MOTIFS BY JRNL TITL 2 COATOMER. JRNL REF EMBO J. V. 32 926 2013 JRNL REFN ISSN 0261-4189 JRNL PMID 23481256 JRNL DOI 10.1038/EMBOJ.2013.41 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.600 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 102029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J86 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102029 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 43.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.32400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 ASN A 267 CG OD1 ND2 REMARK 470 GLU B 184 CG CD OE1 OE2 REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 ARG B 283 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 484 O HOH A 553 1.81 REMARK 500 O HOH A 686 O HOH A 726 1.83 REMARK 500 O HOH C 110 O HOH C 112 1.85 REMARK 500 SD MET A 228 O HOH A 711 1.85 REMARK 500 O HOH B 683 O HOH B 689 1.87 REMARK 500 O HOH B 718 O HOH B 724 1.87 REMARK 500 O HOH B 701 O HOH B 705 1.88 REMARK 500 O HOH A 722 O HOH A 729 1.88 REMARK 500 O HOH B 589 O HOH B 723 1.90 REMARK 500 O HOH B 679 O HOH B 685 1.93 REMARK 500 O HOH B 433 O HOH B 593 1.93 REMARK 500 O HOH B 545 O HOH B 564 1.93 REMARK 500 O HOH A 677 O HOH A 739 1.94 REMARK 500 O HOH A 707 O HOH A 720 1.94 REMARK 500 O HOH A 502 O HOH A 691 1.94 REMARK 500 N THR C 1 O HOH C 110 1.96 REMARK 500 O HOH A 453 O HOH A 681 1.96 REMARK 500 O HOH B 699 O HOH B 720 1.98 REMARK 500 O HOH A 738 O HOH A 740 1.98 REMARK 500 O HOH A 702 O HOH A 728 1.99 REMARK 500 O HOH A 690 O HOH A 701 1.99 REMARK 500 O HOH B 581 O HOH B 618 2.00 REMARK 500 O HOH A 703 O HOH A 708 2.00 REMARK 500 OD1 ASP A 191 O HOH A 669 2.00 REMARK 500 O HOH B 487 O HOH B 556 2.01 REMARK 500 O HOH A 680 O HOH A 732 2.01 REMARK 500 O HOH A 620 O HOH A 621 2.01 REMARK 500 O HOH B 648 O HOH B 672 2.02 REMARK 500 O HOH B 634 O HOH B 638 2.02 REMARK 500 O HOH B 597 O HOH B 709 2.03 REMARK 500 O HOH B 588 O HOH B 729 2.03 REMARK 500 O HOH B 627 O HOH B 630 2.03 REMARK 500 O HOH A 483 O HOH A 574 2.03 REMARK 500 O HOH B 524 O HOH B 569 2.04 REMARK 500 O LYS A 2 O HOH A 635 2.06 REMARK 500 O HOH A 536 O HOH A 592 2.06 REMARK 500 O HOH A 707 O HOH A 712 2.07 REMARK 500 O HOH A 708 O HOH A 718 2.08 REMARK 500 O HOH A 649 O HOH A 652 2.08 REMARK 500 O HOH B 698 O HOH B 722 2.08 REMARK 500 O HOH A 480 O HOH A 585 2.08 REMARK 500 O HOH A 541 O HOH A 573 2.08 REMARK 500 O HOH A 532 O HOH A 644 2.09 REMARK 500 O HOH B 652 O HOH B 670 2.10 REMARK 500 O HOH A 628 O HOH A 636 2.10 REMARK 500 O HOH A 507 O HOH A 508 2.11 REMARK 500 O HOH A 656 O HOH A 714 2.11 REMARK 500 NE2 GLN A 172 O HOH A 491 2.12 REMARK 500 O HOH A 635 O HOH A 724 2.12 REMARK 500 O HOH A 557 O HOH A 612 2.12 REMARK 500 REMARK 500 THIS ENTRY HAS 59 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 602 O HOH B 636 1655 1.76 REMARK 500 O HOH B 712 O HOH B 725 1565 2.11 REMARK 500 OH TYR A 200 O HOH A 491 2555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR D 5 C ASN D 6 N 0.285 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 78 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 4 74.59 9.36 REMARK 500 PHE A 77 3.06 85.96 REMARK 500 PRO A 97 32.68 -87.44 REMARK 500 LEU A 119 7.89 82.58 REMARK 500 ASP A 152 82.35 -157.85 REMARK 500 LEU A 208 4.32 82.17 REMARK 500 GLU A 271 -143.67 64.73 REMARK 500 LYS A 284 21.77 49.60 REMARK 500 PHE B 77 2.47 85.63 REMARK 500 PRO B 97 30.35 -89.57 REMARK 500 ASP B 152 82.09 -156.17 REMARK 500 ARG B 163 12.34 80.83 REMARK 500 GLU B 271 -143.89 65.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J73 RELATED DB: PDB REMARK 900 RELATED ID: 4J77 RELATED DB: PDB REMARK 900 RELATED ID: 4J78 RELATED DB: PDB REMARK 900 RELATED ID: 4J79 RELATED DB: PDB REMARK 900 RELATED ID: 4J81 RELATED DB: PDB REMARK 900 RELATED ID: 4J82 RELATED DB: PDB REMARK 900 RELATED ID: 4J84 RELATED DB: PDB REMARK 900 RELATED ID: 4J87 RELATED DB: PDB REMARK 900 RELATED ID: 4J8B RELATED DB: PDB REMARK 900 RELATED ID: 4J8G RELATED DB: PDB DBREF 4J86 A 1 301 UNP P41811 COPB2_YEAST 1 301 DBREF 4J86 B 1 301 UNP P41811 COPB2_YEAST 1 301 DBREF 4J86 C 1 6 UNP P33767 OSTB_YEAST 425 430 DBREF 4J86 D 1 6 UNP P33767 OSTB_YEAST 425 430 SEQADV 4J86 ILE A 39 UNP P41811 LEU 39 CONFLICT SEQADV 4J86 ILE B 39 UNP P41811 LEU 39 CONFLICT SEQRES 1 A 301 MET LYS LEU ASP ILE LYS LYS THR PHE SER ASN ARG SER SEQRES 2 A 301 ASP ARG VAL LYS GLY ILE ASP PHE HIS PRO THR GLU PRO SEQRES 3 A 301 TRP VAL LEU THR THR LEU TYR SER GLY ARG VAL GLU ILE SEQRES 4 A 301 TRP ASN TYR GLU THR GLN VAL GLU VAL ARG SER ILE GLN SEQRES 5 A 301 VAL THR GLU THR PRO VAL ARG ALA GLY LYS PHE ILE ALA SEQRES 6 A 301 ARG LYS ASN TRP ILE ILE VAL GLY SER ASP ASP PHE ARG SEQRES 7 A 301 ILE ARG VAL PHE ASN TYR ASN THR GLY GLU LYS VAL VAL SEQRES 8 A 301 ASP PHE GLU ALA HIS PRO ASP TYR ILE ARG SER ILE ALA SEQRES 9 A 301 VAL HIS PRO THR LYS PRO TYR VAL LEU SER GLY SER ASP SEQRES 10 A 301 ASP LEU THR VAL LYS LEU TRP ASN TRP GLU ASN ASN TRP SEQRES 11 A 301 ALA LEU GLU GLN THR PHE GLU GLY HIS GLU HIS PHE VAL SEQRES 12 A 301 MET CYS VAL ALA PHE ASN PRO LYS ASP PRO SER THR PHE SEQRES 13 A 301 ALA SER GLY CYS LEU ASP ARG THR VAL LYS VAL TRP SER SEQRES 14 A 301 LEU GLY GLN SER THR PRO ASN PHE THR LEU THR THR GLY SEQRES 15 A 301 GLN GLU ARG GLY VAL ASN TYR VAL ASP TYR TYR PRO LEU SEQRES 16 A 301 PRO ASP LYS PRO TYR MET ILE THR ALA SER ASP ASP LEU SEQRES 17 A 301 THR ILE LYS ILE TRP ASP TYR GLN THR LYS SER CYS VAL SEQRES 18 A 301 ALA THR LEU GLU GLY HIS MET SER ASN VAL SER PHE ALA SEQRES 19 A 301 VAL PHE HIS PRO THR LEU PRO ILE ILE ILE SER GLY SER SEQRES 20 A 301 GLU ASP GLY THR LEU LYS ILE TRP ASN SER SER THR TYR SEQRES 21 A 301 LYS VAL GLU LYS THR LEU ASN VAL GLY LEU GLU ARG SER SEQRES 22 A 301 TRP CYS ILE ALA THR HIS PRO THR GLY ARG LYS ASN TYR SEQRES 23 A 301 ILE ALA SER GLY PHE ASP ASN GLY PHE THR VAL LEU SER SEQRES 24 A 301 LEU GLY SEQRES 1 B 301 MET LYS LEU ASP ILE LYS LYS THR PHE SER ASN ARG SER SEQRES 2 B 301 ASP ARG VAL LYS GLY ILE ASP PHE HIS PRO THR GLU PRO SEQRES 3 B 301 TRP VAL LEU THR THR LEU TYR SER GLY ARG VAL GLU ILE SEQRES 4 B 301 TRP ASN TYR GLU THR GLN VAL GLU VAL ARG SER ILE GLN SEQRES 5 B 301 VAL THR GLU THR PRO VAL ARG ALA GLY LYS PHE ILE ALA SEQRES 6 B 301 ARG LYS ASN TRP ILE ILE VAL GLY SER ASP ASP PHE ARG SEQRES 7 B 301 ILE ARG VAL PHE ASN TYR ASN THR GLY GLU LYS VAL VAL SEQRES 8 B 301 ASP PHE GLU ALA HIS PRO ASP TYR ILE ARG SER ILE ALA SEQRES 9 B 301 VAL HIS PRO THR LYS PRO TYR VAL LEU SER GLY SER ASP SEQRES 10 B 301 ASP LEU THR VAL LYS LEU TRP ASN TRP GLU ASN ASN TRP SEQRES 11 B 301 ALA LEU GLU GLN THR PHE GLU GLY HIS GLU HIS PHE VAL SEQRES 12 B 301 MET CYS VAL ALA PHE ASN PRO LYS ASP PRO SER THR PHE SEQRES 13 B 301 ALA SER GLY CYS LEU ASP ARG THR VAL LYS VAL TRP SER SEQRES 14 B 301 LEU GLY GLN SER THR PRO ASN PHE THR LEU THR THR GLY SEQRES 15 B 301 GLN GLU ARG GLY VAL ASN TYR VAL ASP TYR TYR PRO LEU SEQRES 16 B 301 PRO ASP LYS PRO TYR MET ILE THR ALA SER ASP ASP LEU SEQRES 17 B 301 THR ILE LYS ILE TRP ASP TYR GLN THR LYS SER CYS VAL SEQRES 18 B 301 ALA THR LEU GLU GLY HIS MET SER ASN VAL SER PHE ALA SEQRES 19 B 301 VAL PHE HIS PRO THR LEU PRO ILE ILE ILE SER GLY SER SEQRES 20 B 301 GLU ASP GLY THR LEU LYS ILE TRP ASN SER SER THR TYR SEQRES 21 B 301 LYS VAL GLU LYS THR LEU ASN VAL GLY LEU GLU ARG SER SEQRES 22 B 301 TRP CYS ILE ALA THR HIS PRO THR GLY ARG LYS ASN TYR SEQRES 23 B 301 ILE ALA SER GLY PHE ASP ASN GLY PHE THR VAL LEU SER SEQRES 24 B 301 LEU GLY SEQRES 1 C 6 THR PHE LYS LYS THR ASN SEQRES 1 D 6 THR PHE LYS LYS THR ASN FORMUL 5 HOH *705(H2 O) HELIX 1 1 ALA A 65 LYS A 67 5 3 HELIX 2 2 GLU A 127 ASN A 129 5 3 HELIX 3 3 GLY A 282 ASN A 285 5 4 HELIX 4 4 ALA B 65 LYS B 67 5 3 HELIX 5 5 GLU B 127 ASN B 129 5 3 HELIX 6 6 GLY B 282 LYS B 284 5 3 HELIX 7 7 PHE C 2 ASN C 6 1 5 HELIX 8 8 PHE D 2 ASN D 6 1 5 SHEET 1 A 4 LYS A 6 ARG A 12 0 SHEET 2 A 4 GLY A 294 SER A 299 -1 O VAL A 297 N PHE A 9 SHEET 3 A 4 ILE A 287 PHE A 291 -1 N PHE A 291 O GLY A 294 SHEET 4 A 4 SER A 273 THR A 278 -1 N TRP A 274 O GLY A 290 SHEET 1 B 4 VAL A 16 PHE A 21 0 SHEET 2 B 4 TRP A 27 LEU A 32 -1 O THR A 31 N LYS A 17 SHEET 3 B 4 ARG A 36 ASN A 41 -1 O ARG A 36 N LEU A 32 SHEET 4 B 4 VAL A 46 GLN A 52 -1 O VAL A 46 N ASN A 41 SHEET 1 C 4 VAL A 58 ILE A 64 0 SHEET 2 C 4 TRP A 69 SER A 74 -1 O TRP A 69 N ILE A 64 SHEET 3 C 4 ARG A 78 ASN A 83 -1 O ARG A 80 N VAL A 72 SHEET 4 C 4 LYS A 89 GLU A 94 -1 O PHE A 93 N ILE A 79 SHEET 1 D 4 ILE A 100 VAL A 105 0 SHEET 2 D 4 TYR A 111 SER A 116 -1 O LEU A 113 N ALA A 104 SHEET 3 D 4 VAL A 121 ASN A 125 -1 O TRP A 124 N VAL A 112 SHEET 4 D 4 ALA A 131 PHE A 136 -1 O PHE A 136 N VAL A 121 SHEET 1 E 4 VAL A 143 PHE A 148 0 SHEET 2 E 4 THR A 155 CYS A 160 -1 O ALA A 157 N ALA A 147 SHEET 3 E 4 THR A 164 SER A 169 -1 O TRP A 168 N PHE A 156 SHEET 4 E 4 PHE A 177 THR A 180 -1 O LEU A 179 N VAL A 165 SHEET 1 F 4 TYR A 189 TYR A 192 0 SHEET 2 F 4 TYR A 200 ALA A 204 -1 O ILE A 202 N ASP A 191 SHEET 3 F 4 THR A 209 ASP A 214 -1 O TRP A 213 N MET A 201 SHEET 4 F 4 CYS A 220 GLU A 225 -1 O LEU A 224 N ILE A 210 SHEET 1 G 4 VAL A 231 PHE A 236 0 SHEET 2 G 4 ILE A 242 SER A 247 -1 O ILE A 244 N VAL A 235 SHEET 3 G 4 THR A 251 ASN A 256 -1 O TRP A 255 N ILE A 243 SHEET 4 G 4 VAL A 262 ASN A 267 -1 O GLU A 263 N ILE A 254 SHEET 1 H 4 LYS B 6 ARG B 12 0 SHEET 2 H 4 GLY B 294 SER B 299 -1 O SER B 299 N LYS B 6 SHEET 3 H 4 TYR B 286 PHE B 291 -1 N PHE B 291 O GLY B 294 SHEET 4 H 4 SER B 273 THR B 278 -1 N TRP B 274 O GLY B 290 SHEET 1 I 4 VAL B 16 PHE B 21 0 SHEET 2 I 4 TRP B 27 LEU B 32 -1 O LEU B 29 N ASP B 20 SHEET 3 I 4 ARG B 36 ASN B 41 -1 O ARG B 36 N LEU B 32 SHEET 4 I 4 VAL B 46 GLN B 52 -1 O VAL B 46 N ASN B 41 SHEET 1 J 4 VAL B 58 ILE B 64 0 SHEET 2 J 4 TRP B 69 SER B 74 -1 O TRP B 69 N ILE B 64 SHEET 3 J 4 ARG B 78 ASN B 83 -1 O ARG B 80 N VAL B 72 SHEET 4 J 4 LYS B 89 GLU B 94 -1 O PHE B 93 N ILE B 79 SHEET 1 K 4 ILE B 100 VAL B 105 0 SHEET 2 K 4 TYR B 111 SER B 116 -1 O LEU B 113 N ALA B 104 SHEET 3 K 4 VAL B 121 ASN B 125 -1 O TRP B 124 N VAL B 112 SHEET 4 K 4 LEU B 132 PHE B 136 -1 O PHE B 136 N VAL B 121 SHEET 1 L 4 VAL B 143 PHE B 148 0 SHEET 2 L 4 THR B 155 CYS B 160 -1 O ALA B 157 N ALA B 147 SHEET 3 L 4 THR B 164 SER B 169 -1 O LYS B 166 N SER B 158 SHEET 4 L 4 PHE B 177 THR B 180 -1 O LEU B 179 N VAL B 165 SHEET 1 M 4 TYR B 189 TYR B 192 0 SHEET 2 M 4 TYR B 200 ALA B 204 -1 O ILE B 202 N ASP B 191 SHEET 3 M 4 THR B 209 ASP B 214 -1 O TRP B 213 N MET B 201 SHEET 4 M 4 CYS B 220 GLU B 225 -1 O LEU B 224 N ILE B 210 SHEET 1 N 4 VAL B 231 PHE B 236 0 SHEET 2 N 4 ILE B 242 SER B 247 -1 O ILE B 244 N VAL B 235 SHEET 3 N 4 THR B 251 ASN B 256 -1 O TRP B 255 N ILE B 243 SHEET 4 N 4 VAL B 262 ASN B 267 -1 O GLU B 263 N ILE B 254 CRYST1 73.976 50.648 83.576 90.00 99.46 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013518 0.000000 0.002252 0.00000 SCALE2 0.000000 0.019744 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012130 0.00000