data_4J9I # _entry.id 4J9I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4J9I pdb_00004j9i 10.2210/pdb4j9i/pdb RCSB RCSB077765 ? ? WWPDB D_1000077765 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2O88 ;Crystal structure of the N114A mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions ; unspecified PDB 3EG0 'Crystal structure of the N114T mutant of ABL-SH3 domain' unspecified PDB 3EG1 ;Crystal structure of the N114Q mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions ; unspecified PDB 3EG2 'Crystal structure of the N114Q mutant of ABL-SH3 domain' unspecified PDB 3EG3 'Crystal structure of the N114A mutant of ABL-SH3 domain' unspecified PDB 3EGU 'Crystal structure of the N114A mutant of ABL-SH3 domain' unspecified PDB 4J9F . unspecified PDB 4J9G . unspecified PDB 4J9H . unspecified # _pdbx_database_status.entry_id 4J9I _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Camara-Artigas, A.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P17' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 ;Crystallization by capillary counter-diffusion and structure determination of the N114A mutant of the SH3 domain of Abl tyrosine kinase complexed with a high-affinity peptide ligand. ; 'Acta Crystallogr.,Sect.D' 63 646 652 2007 ABCRE6 DK 0907-4449 0766 ? 17452790 10.1107/S0907444907011109 2 'Role of interfacial water molecules in proline-rich ligand recognition by the Src homology 3 domain of Abl.' J.Biol.Chem. 285 2823 2833 2010 JBCHA3 US 0021-9258 0071 ? 19906645 10.1074/jbc.M109.048033 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Camara-Artigas, A.' 1 ? 1 'Camara-Artigas, A.' 2 ? 1 'Palencia, A.' 3 ? 1 'Martinez, J.C.' 4 ? 1 'Luque, I.' 5 ? 1 'Gavira, J.A.' 6 ? 1 'Garcia-Ruiz, J.M.' 7 ? 2 'Palencia, A.' 8 ? 2 'Camara-Artigas, A.' 9 ? 2 'Pisabarro, M.T.' 10 ? 2 'Martinez, J.C.' 11 ? 2 'Luque, I.' 12 ? # _cell.entry_id 4J9I _cell.length_a 88.029 _cell.length_b 88.029 _cell.length_c 45.801 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4J9I _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein kinase ABL1' 7009.694 3 2.7.10.2 ? 'SH3 domain (unp residues 60-121)' ? 2 polymer syn P17 1065.218 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 69 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Abelson murine leukemia viral oncogene homolog 1, Abelson tyrosine-protein kinase 1, Proto-oncogene c-Abl, p150' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS MENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS A,C,E ? 2 'polypeptide(L)' no yes '(ACE)APTYSPPLPP' XAPTYSPPLPP B,D,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ASN n 1 4 ASP n 1 5 PRO n 1 6 ASN n 1 7 LEU n 1 8 PHE n 1 9 VAL n 1 10 ALA n 1 11 LEU n 1 12 TYR n 1 13 ASP n 1 14 PHE n 1 15 VAL n 1 16 ALA n 1 17 SER n 1 18 GLY n 1 19 ASP n 1 20 ASN n 1 21 THR n 1 22 LEU n 1 23 SER n 1 24 ILE n 1 25 THR n 1 26 LYS n 1 27 GLY n 1 28 GLU n 1 29 LYS n 1 30 LEU n 1 31 ARG n 1 32 VAL n 1 33 LEU n 1 34 GLY n 1 35 TYR n 1 36 ASN n 1 37 HIS n 1 38 ASN n 1 39 GLY n 1 40 GLU n 1 41 TRP n 1 42 CYS n 1 43 GLU n 1 44 ALA n 1 45 GLN n 1 46 THR n 1 47 LYS n 1 48 ASN n 1 49 GLY n 1 50 GLN n 1 51 GLY n 1 52 TRP n 1 53 VAL n 1 54 PRO n 1 55 SER n 1 56 ASN n 1 57 TYR n 1 58 ILE n 1 59 THR n 1 60 PRO n 1 61 VAL n 1 62 ASN n 1 63 SER n 2 1 ACE n 2 2 ALA n 2 3 PRO n 2 4 THR n 2 5 TYR n 2 6 SER n 2 7 PRO n 2 8 PRO n 2 9 LEU n 2 10 PRO n 2 11 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ABL, ABL1, JTK7' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PBAT4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ABL1_HUMAN P00519 1 ENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS 60 ? 2 PDB 4J9I 4J9I 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4J9I A 2 ? 63 ? P00519 60 ? 121 ? 60 121 2 1 4J9I C 2 ? 63 ? P00519 60 ? 121 ? 60 121 3 1 4J9I E 2 ? 63 ? P00519 60 ? 121 ? 60 121 4 2 4J9I B 1 ? 11 ? 4J9I 0 ? 10 ? 0 10 5 2 4J9I D 1 ? 11 ? 4J9I 0 ? 10 ? 0 10 6 2 4J9I F 1 ? 11 ? 4J9I 0 ? 10 ? 0 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4J9I MET A 1 ? UNP P00519 ? ? 'initiating methionine' 59 1 2 4J9I MET C 1 ? UNP P00519 ? ? 'initiating methionine' 59 2 3 4J9I MET E 1 ? UNP P00519 ? ? 'initiating methionine' 59 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4J9I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2.8 M ammonium sulphate, 5% PEG300, 0.1 M LiCl, 0.1 M Hepes, capillary, pH 7, LIQUID DIFFUSION, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2010-10-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'MONTEL OPTIC' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4J9I _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 76.227 _reflns.d_resolution_high 1.999 _reflns.number_obs 14549 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.15650 _reflns.pdbx_Rsym_value 0.15650 _reflns.pdbx_netI_over_sigmaI 14.3200 _reflns.B_iso_Wilson_estimate 24.10 _reflns.pdbx_redundancy 15.900 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.08 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.01300 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.000 _reflns_shell.pdbx_redundancy 7.28 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4J9I _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10583 _refine.ls_number_reflns_all 10609 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.84 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.197 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.740 _refine.ls_number_reflns_R_free 502 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.100 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 26.12 _refine.aniso_B[1][1] 0.00000 _refine.aniso_B[2][2] 0.00000 _refine.aniso_B[3][3] 0.00000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 31.39 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 2O88 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.280 _refine.pdbx_overall_phase_error 26.030 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1556 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 1637 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 19.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 1623 'X-RAY DIFFRACTION' ? f_angle_d 1.121 ? ? 2209 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.303 ? ? 570 'X-RAY DIFFRACTION' ? f_chiral_restr 0.076 ? ? 235 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 285 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.2009 2.4221 2475 0.2516 100.00 0.3251 . . 126 . . . . 'X-RAY DIFFRACTION' . 2.4221 2.7717 2475 0.2424 100.00 0.3075 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.7717 3.4890 2536 0.1911 100.00 0.2293 . . 115 . . . . 'X-RAY DIFFRACTION' . 3.4890 19.8370 2595 0.1649 100.00 0.1743 . . 125 . . . . # _struct.entry_id 4J9I _struct.title 'Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P17' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4J9I _struct_keywords.text 'beta shandwich, SH3 domain, kinase, poly proline rich motifs, Transferase-unknown function complex' _struct_keywords.pdbx_keywords 'Transferase/unknown function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ACE 1 C ? ? ? 1_555 B ALA 2 N ? ? B ACE 0 B ALA 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? D ACE 1 C ? ? ? 1_555 D ALA 2 N ? ? D ACE 0 D ALA 1 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale3 covale both ? F ACE 1 C ? ? ? 1_555 F ALA 2 N ? ? F ACE 0 F ALA 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 10 _struct_mon_prot_cis.label_asym_id F _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 9 _struct_mon_prot_cis.auth_asym_id F _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 11 _struct_mon_prot_cis.pdbx_label_asym_id_2 F _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 10 _struct_mon_prot_cis.pdbx_auth_asym_id_2 F _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 49 ? PRO A 54 ? GLY A 107 PRO A 112 A 2 TRP A 41 ? THR A 46 ? TRP A 99 THR A 104 A 3 LYS A 29 ? TYR A 35 ? LYS A 87 TYR A 93 A 4 PHE A 8 ? ALA A 10 ? PHE A 66 ALA A 68 A 5 ILE A 58 ? PRO A 60 ? ILE A 116 PRO A 118 B 1 GLY C 49 ? PRO C 54 ? GLY C 107 PRO C 112 B 2 TRP C 41 ? THR C 46 ? TRP C 99 THR C 104 B 3 LYS C 29 ? TYR C 35 ? LYS C 87 TYR C 93 B 4 PHE C 8 ? ALA C 10 ? PHE C 66 ALA C 68 B 5 ILE C 58 ? PRO C 60 ? ILE C 116 PRO C 118 C 1 GLY E 49 ? PRO E 54 ? GLY E 107 PRO E 112 C 2 TRP E 41 ? THR E 46 ? TRP E 99 THR E 104 C 3 LYS E 29 ? TYR E 35 ? LYS E 87 TYR E 93 C 4 LEU E 7 ? ALA E 10 ? LEU E 65 ALA E 68 C 5 ILE E 58 ? PRO E 60 ? ILE E 116 PRO E 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 53 ? O VAL A 111 N CYS A 42 ? N CYS A 100 A 2 3 O GLU A 43 ? O GLU A 101 N LEU A 33 ? N LEU A 91 A 3 4 O LEU A 30 ? O LEU A 88 N PHE A 8 ? N PHE A 66 A 4 5 N VAL A 9 ? N VAL A 67 O THR A 59 ? O THR A 117 B 1 2 O GLY C 51 ? O GLY C 109 N ALA C 44 ? N ALA C 102 B 2 3 O GLU C 43 ? O GLU C 101 N LEU C 33 ? N LEU C 91 B 3 4 O LEU C 30 ? O LEU C 88 N PHE C 8 ? N PHE C 66 B 4 5 N VAL C 9 ? N VAL C 67 O THR C 59 ? O THR C 117 C 1 2 O VAL E 53 ? O VAL E 111 N CYS E 42 ? N CYS E 100 C 2 3 O GLN E 45 ? O GLN E 103 N ARG E 31 ? N ARG E 89 C 3 4 O LEU E 30 ? O LEU E 88 N PHE E 8 ? N PHE E 66 C 4 5 N VAL E 9 ? N VAL E 67 O THR E 59 ? O THR E 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software E GOL 201 ? 3 'BINDING SITE FOR RESIDUE GOL E 201' AC2 Software E GOL 202 ? 3 'BINDING SITE FOR RESIDUE GOL E 202' AC3 Software ? ? ? ? 17 'BINDING SITE FOR CHAIN B OF P17' AC4 Software ? ? ? ? 14 'BINDING SITE FOR CHAIN D OF P17' AC5 Software ? ? ? ? 16 'BINDING SITE FOR CHAIN F OF P17' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN E 6 ? ASN E 64 . ? 1_555 ? 2 AC1 3 LEU E 7 ? LEU E 65 . ? 1_555 ? 3 AC1 3 ASN E 62 ? ASN E 120 . ? 1_555 ? 4 AC2 3 TYR C 35 ? TYR C 93 . ? 5_554 ? 5 AC2 3 ASN C 38 ? ASN C 96 . ? 5_554 ? 6 AC2 3 GLY C 39 ? GLY C 97 . ? 5_554 ? 7 AC3 17 TYR A 12 ? TYR A 70 . ? 5_554 ? 8 AC3 17 TYR A 12 ? TYR A 70 . ? 1_555 ? 9 AC3 17 SER A 17 ? SER A 75 . ? 1_555 ? 10 AC3 17 ASP A 19 ? ASP A 77 . ? 1_555 ? 11 AC3 17 THR A 21 ? THR A 79 . ? 1_555 ? 12 AC3 17 LYS A 26 ? LYS A 84 . ? 5_554 ? 13 AC3 17 GLU A 40 ? GLU A 98 . ? 1_555 ? 14 AC3 17 TRP A 41 ? TRP A 99 . ? 1_555 ? 15 AC3 17 ASN A 48 ? ASN A 106 . ? 3_555 ? 16 AC3 17 TRP A 52 ? TRP A 110 . ? 1_555 ? 17 AC3 17 PRO A 54 ? PRO A 112 . ? 1_555 ? 18 AC3 17 TYR A 57 ? TYR A 115 . ? 1_555 ? 19 AC3 17 HOH I . ? HOH A 219 . ? 1_555 ? 20 AC3 17 HOH I . ? HOH A 222 . ? 3_555 ? 21 AC3 17 HOH J . ? HOH B 101 . ? 1_555 ? 22 AC3 17 ASN C 38 ? ASN C 96 . ? 1_555 ? 23 AC3 17 HOH M . ? HOH E 318 . ? 5_554 ? 24 AC4 14 TYR C 12 ? TYR C 70 . ? 1_555 ? 25 AC4 14 SER C 17 ? SER C 75 . ? 1_555 ? 26 AC4 14 ASN C 20 ? ASN C 78 . ? 1_555 ? 27 AC4 14 THR C 21 ? THR C 79 . ? 1_555 ? 28 AC4 14 ASN C 36 ? ASN C 94 . ? 1_555 ? 29 AC4 14 GLU C 40 ? GLU C 98 . ? 1_555 ? 30 AC4 14 TRP C 41 ? TRP C 99 . ? 1_555 ? 31 AC4 14 LYS C 47 ? LYS C 105 . ? 2_544 ? 32 AC4 14 TRP C 52 ? TRP C 110 . ? 1_555 ? 33 AC4 14 PRO C 54 ? PRO C 112 . ? 1_555 ? 34 AC4 14 ASN C 56 ? ASN C 114 . ? 1_555 ? 35 AC4 14 TYR C 57 ? TYR C 115 . ? 1_555 ? 36 AC4 14 TYR E 12 ? TYR E 70 . ? 5_555 ? 37 AC4 14 LYS E 26 ? LYS E 84 . ? 5_555 ? 38 AC5 16 LYS C 26 ? LYS C 84 . ? 5_555 ? 39 AC5 16 PRO C 60 ? PRO C 118 . ? 1_555 ? 40 AC5 16 TYR E 12 ? TYR E 70 . ? 1_555 ? 41 AC5 16 SER E 17 ? SER E 75 . ? 1_555 ? 42 AC5 16 GLY E 18 ? GLY E 76 . ? 1_555 ? 43 AC5 16 ASP E 19 ? ASP E 77 . ? 1_555 ? 44 AC5 16 GLU E 40 ? GLU E 98 . ? 1_555 ? 45 AC5 16 TRP E 41 ? TRP E 99 . ? 1_555 ? 46 AC5 16 ASN E 48 ? ASN E 106 . ? 2_654 ? 47 AC5 16 TRP E 52 ? TRP E 110 . ? 1_555 ? 48 AC5 16 PRO E 54 ? PRO E 112 . ? 1_555 ? 49 AC5 16 ASN E 56 ? ASN E 114 . ? 1_555 ? 50 AC5 16 TYR E 57 ? TYR E 115 . ? 1_555 ? 51 AC5 16 HOH M . ? HOH E 317 . ? 1_555 ? 52 AC5 16 HOH N . ? HOH F 101 . ? 1_555 ? 53 AC5 16 HOH N . ? HOH F 102 . ? 1_555 ? # _atom_sites.entry_id 4J9I _atom_sites.fract_transf_matrix[1][1] 0.011360 _atom_sites.fract_transf_matrix[1][2] 0.006559 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013117 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021834 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 59 ? ? ? A . n A 1 2 GLU 2 60 ? ? ? A . n A 1 3 ASN 3 61 ? ? ? A . n A 1 4 ASP 4 62 ? ? ? A . n A 1 5 PRO 5 63 ? ? ? A . n A 1 6 ASN 6 64 ? ? ? A . n A 1 7 LEU 7 65 65 LEU LEU A . n A 1 8 PHE 8 66 66 PHE PHE A . n A 1 9 VAL 9 67 67 VAL VAL A . n A 1 10 ALA 10 68 68 ALA ALA A . n A 1 11 LEU 11 69 69 LEU LEU A . n A 1 12 TYR 12 70 70 TYR TYR A . n A 1 13 ASP 13 71 71 ASP ASP A . n A 1 14 PHE 14 72 72 PHE PHE A . n A 1 15 VAL 15 73 73 VAL VAL A . n A 1 16 ALA 16 74 74 ALA ALA A . n A 1 17 SER 17 75 75 SER SER A . n A 1 18 GLY 18 76 76 GLY GLY A . n A 1 19 ASP 19 77 77 ASP ASP A . n A 1 20 ASN 20 78 78 ASN ASN A . n A 1 21 THR 21 79 79 THR THR A . n A 1 22 LEU 22 80 80 LEU LEU A . n A 1 23 SER 23 81 81 SER SER A . n A 1 24 ILE 24 82 82 ILE ILE A . n A 1 25 THR 25 83 83 THR THR A . n A 1 26 LYS 26 84 84 LYS LYS A . n A 1 27 GLY 27 85 85 GLY GLY A . n A 1 28 GLU 28 86 86 GLU GLU A . n A 1 29 LYS 29 87 87 LYS LYS A . n A 1 30 LEU 30 88 88 LEU LEU A . n A 1 31 ARG 31 89 89 ARG ARG A . n A 1 32 VAL 32 90 90 VAL VAL A . n A 1 33 LEU 33 91 91 LEU LEU A . n A 1 34 GLY 34 92 92 GLY GLY A . n A 1 35 TYR 35 93 93 TYR TYR A . n A 1 36 ASN 36 94 94 ASN ASN A . n A 1 37 HIS 37 95 95 HIS HIS A . n A 1 38 ASN 38 96 96 ASN ASN A . n A 1 39 GLY 39 97 97 GLY GLY A . n A 1 40 GLU 40 98 98 GLU GLU A . n A 1 41 TRP 41 99 99 TRP TRP A . n A 1 42 CYS 42 100 100 CYS CYS A . n A 1 43 GLU 43 101 101 GLU GLU A . n A 1 44 ALA 44 102 102 ALA ALA A . n A 1 45 GLN 45 103 103 GLN GLN A . n A 1 46 THR 46 104 104 THR THR A . n A 1 47 LYS 47 105 105 LYS LYS A . n A 1 48 ASN 48 106 106 ASN ASN A . n A 1 49 GLY 49 107 107 GLY GLY A . n A 1 50 GLN 50 108 108 GLN GLN A . n A 1 51 GLY 51 109 109 GLY GLY A . n A 1 52 TRP 52 110 110 TRP TRP A . n A 1 53 VAL 53 111 111 VAL VAL A . n A 1 54 PRO 54 112 112 PRO PRO A . n A 1 55 SER 55 113 113 SER SER A . n A 1 56 ASN 56 114 114 ASN ASN A . n A 1 57 TYR 57 115 115 TYR TYR A . n A 1 58 ILE 58 116 116 ILE ILE A . n A 1 59 THR 59 117 117 THR THR A . n A 1 60 PRO 60 118 118 PRO PRO A . n A 1 61 VAL 61 119 119 VAL VAL A . n A 1 62 ASN 62 120 120 ASN ASN A . n A 1 63 SER 63 121 ? ? ? A . n B 2 1 ACE 1 0 0 ACE ACE B . n B 2 2 ALA 2 1 1 ALA ALA B . n B 2 3 PRO 3 2 2 PRO PRO B . n B 2 4 THR 4 3 3 THR THR B . n B 2 5 TYR 5 4 4 TYR TYR B . n B 2 6 SER 6 5 5 SER SER B . n B 2 7 PRO 7 6 6 PRO PRO B . n B 2 8 PRO 8 7 7 PRO PRO B . n B 2 9 LEU 9 8 8 LEU LEU B . n B 2 10 PRO 10 9 9 PRO PRO B . n B 2 11 PRO 11 10 10 PRO PRO B . n C 1 1 MET 1 59 ? ? ? C . n C 1 2 GLU 2 60 ? ? ? C . n C 1 3 ASN 3 61 ? ? ? C . n C 1 4 ASP 4 62 ? ? ? C . n C 1 5 PRO 5 63 ? ? ? C . n C 1 6 ASN 6 64 ? ? ? C . n C 1 7 LEU 7 65 65 LEU LEU C . n C 1 8 PHE 8 66 66 PHE PHE C . n C 1 9 VAL 9 67 67 VAL VAL C . n C 1 10 ALA 10 68 68 ALA ALA C . n C 1 11 LEU 11 69 69 LEU LEU C . n C 1 12 TYR 12 70 70 TYR TYR C . n C 1 13 ASP 13 71 71 ASP ASP C . n C 1 14 PHE 14 72 72 PHE PHE C . n C 1 15 VAL 15 73 73 VAL VAL C . n C 1 16 ALA 16 74 74 ALA ALA C . n C 1 17 SER 17 75 75 SER SER C . n C 1 18 GLY 18 76 76 GLY GLY C . n C 1 19 ASP 19 77 77 ASP ASP C . n C 1 20 ASN 20 78 78 ASN ASN C . n C 1 21 THR 21 79 79 THR THR C . n C 1 22 LEU 22 80 80 LEU LEU C . n C 1 23 SER 23 81 81 SER SER C . n C 1 24 ILE 24 82 82 ILE ILE C . n C 1 25 THR 25 83 83 THR THR C . n C 1 26 LYS 26 84 84 LYS LYS C . n C 1 27 GLY 27 85 85 GLY GLY C . n C 1 28 GLU 28 86 86 GLU GLU C . n C 1 29 LYS 29 87 87 LYS LYS C . n C 1 30 LEU 30 88 88 LEU LEU C . n C 1 31 ARG 31 89 89 ARG ARG C . n C 1 32 VAL 32 90 90 VAL VAL C . n C 1 33 LEU 33 91 91 LEU LEU C . n C 1 34 GLY 34 92 92 GLY GLY C . n C 1 35 TYR 35 93 93 TYR TYR C . n C 1 36 ASN 36 94 94 ASN ASN C . n C 1 37 HIS 37 95 95 HIS HIS C . n C 1 38 ASN 38 96 96 ASN ASN C . n C 1 39 GLY 39 97 97 GLY GLY C . n C 1 40 GLU 40 98 98 GLU GLU C . n C 1 41 TRP 41 99 99 TRP TRP C . n C 1 42 CYS 42 100 100 CYS CYS C . n C 1 43 GLU 43 101 101 GLU GLU C . n C 1 44 ALA 44 102 102 ALA ALA C . n C 1 45 GLN 45 103 103 GLN GLN C . n C 1 46 THR 46 104 104 THR THR C . n C 1 47 LYS 47 105 105 LYS LYS C . n C 1 48 ASN 48 106 106 ASN ASN C . n C 1 49 GLY 49 107 107 GLY GLY C . n C 1 50 GLN 50 108 108 GLN GLN C . n C 1 51 GLY 51 109 109 GLY GLY C . n C 1 52 TRP 52 110 110 TRP TRP C . n C 1 53 VAL 53 111 111 VAL VAL C . n C 1 54 PRO 54 112 112 PRO PRO C . n C 1 55 SER 55 113 113 SER SER C . n C 1 56 ASN 56 114 114 ASN ASN C . n C 1 57 TYR 57 115 115 TYR TYR C . n C 1 58 ILE 58 116 116 ILE ILE C . n C 1 59 THR 59 117 117 THR THR C . n C 1 60 PRO 60 118 118 PRO PRO C . n C 1 61 VAL 61 119 119 VAL VAL C . n C 1 62 ASN 62 120 120 ASN ASN C . n C 1 63 SER 63 121 ? ? ? C . n D 2 1 ACE 1 0 0 ACE ACE D . n D 2 2 ALA 2 1 1 ALA ALA D . n D 2 3 PRO 3 2 2 PRO PRO D . n D 2 4 THR 4 3 3 THR THR D . n D 2 5 TYR 5 4 4 TYR TYR D . n D 2 6 SER 6 5 5 SER SER D . n D 2 7 PRO 7 6 6 PRO PRO D . n D 2 8 PRO 8 7 7 PRO PRO D . n D 2 9 LEU 9 8 8 LEU LEU D . n D 2 10 PRO 10 9 9 PRO PRO D . n D 2 11 PRO 11 10 10 PRO PRO D . n E 1 1 MET 1 59 ? ? ? E . n E 1 2 GLU 2 60 ? ? ? E . n E 1 3 ASN 3 61 ? ? ? E . n E 1 4 ASP 4 62 ? ? ? E . n E 1 5 PRO 5 63 ? ? ? E . n E 1 6 ASN 6 64 64 ASN ASN E . n E 1 7 LEU 7 65 65 LEU LEU E . n E 1 8 PHE 8 66 66 PHE PHE E . n E 1 9 VAL 9 67 67 VAL VAL E . n E 1 10 ALA 10 68 68 ALA ALA E . n E 1 11 LEU 11 69 69 LEU LEU E . n E 1 12 TYR 12 70 70 TYR TYR E . n E 1 13 ASP 13 71 71 ASP ASP E . n E 1 14 PHE 14 72 72 PHE PHE E . n E 1 15 VAL 15 73 73 VAL VAL E . n E 1 16 ALA 16 74 74 ALA ALA E . n E 1 17 SER 17 75 75 SER SER E . n E 1 18 GLY 18 76 76 GLY GLY E . n E 1 19 ASP 19 77 77 ASP ASP E . n E 1 20 ASN 20 78 78 ASN ASN E . n E 1 21 THR 21 79 79 THR THR E . n E 1 22 LEU 22 80 80 LEU LEU E . n E 1 23 SER 23 81 81 SER SER E . n E 1 24 ILE 24 82 82 ILE ILE E . n E 1 25 THR 25 83 83 THR THR E . n E 1 26 LYS 26 84 84 LYS LYS E . n E 1 27 GLY 27 85 85 GLY GLY E . n E 1 28 GLU 28 86 86 GLU GLU E . n E 1 29 LYS 29 87 87 LYS LYS E . n E 1 30 LEU 30 88 88 LEU LEU E . n E 1 31 ARG 31 89 89 ARG ARG E . n E 1 32 VAL 32 90 90 VAL VAL E . n E 1 33 LEU 33 91 91 LEU LEU E . n E 1 34 GLY 34 92 92 GLY GLY E . n E 1 35 TYR 35 93 93 TYR TYR E . n E 1 36 ASN 36 94 94 ASN ASN E . n E 1 37 HIS 37 95 95 HIS HIS E . n E 1 38 ASN 38 96 96 ASN ASN E . n E 1 39 GLY 39 97 97 GLY GLY E . n E 1 40 GLU 40 98 98 GLU GLU E . n E 1 41 TRP 41 99 99 TRP TRP E . n E 1 42 CYS 42 100 100 CYS CYS E . n E 1 43 GLU 43 101 101 GLU GLU E . n E 1 44 ALA 44 102 102 ALA ALA E . n E 1 45 GLN 45 103 103 GLN GLN E . n E 1 46 THR 46 104 104 THR THR E . n E 1 47 LYS 47 105 105 LYS LYS E . n E 1 48 ASN 48 106 106 ASN ASN E . n E 1 49 GLY 49 107 107 GLY GLY E . n E 1 50 GLN 50 108 108 GLN GLN E . n E 1 51 GLY 51 109 109 GLY GLY E . n E 1 52 TRP 52 110 110 TRP TRP E . n E 1 53 VAL 53 111 111 VAL VAL E . n E 1 54 PRO 54 112 112 PRO PRO E . n E 1 55 SER 55 113 113 SER SER E . n E 1 56 ASN 56 114 114 ASN ASN E . n E 1 57 TYR 57 115 115 TYR TYR E . n E 1 58 ILE 58 116 116 ILE ILE E . n E 1 59 THR 59 117 117 THR THR E . n E 1 60 PRO 60 118 118 PRO PRO E . n E 1 61 VAL 61 119 119 VAL VAL E . n E 1 62 ASN 62 120 120 ASN ASN E . n E 1 63 SER 63 121 ? ? ? E . n F 2 1 ACE 1 0 0 ACE ACE F . n F 2 2 ALA 2 1 1 ALA ALA F . n F 2 3 PRO 3 2 2 PRO PRO F . n F 2 4 THR 4 3 3 THR THR F . n F 2 5 TYR 5 4 4 TYR TYR F . n F 2 6 SER 6 5 5 SER SER F . n F 2 7 PRO 7 6 6 PRO PRO F . n F 2 8 PRO 8 7 7 PRO PRO F . n F 2 9 LEU 9 8 8 LEU LEU F . n F 2 10 PRO 10 9 9 PRO PRO F . n F 2 11 PRO 11 10 10 PRO PRO F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL 1 201 1 GOL GOL E . H 3 GOL 1 202 1 GOL GOL E . I 4 HOH 1 201 2 HOH HOH A . I 4 HOH 2 202 202 HOH HOH A . I 4 HOH 3 203 5 HOH HOH A . I 4 HOH 4 204 6 HOH HOH A . I 4 HOH 5 205 10 HOH HOH A . I 4 HOH 6 206 12 HOH HOH A . I 4 HOH 7 207 16 HOH HOH A . I 4 HOH 8 208 18 HOH HOH A . I 4 HOH 9 209 21 HOH HOH A . I 4 HOH 10 210 23 HOH HOH A . I 4 HOH 11 211 24 HOH HOH A . I 4 HOH 12 212 27 HOH HOH A . I 4 HOH 13 213 31 HOH HOH A . I 4 HOH 14 214 37 HOH HOH A . I 4 HOH 15 215 41 HOH HOH A . I 4 HOH 16 216 46 HOH HOH A . I 4 HOH 17 217 47 HOH HOH A . I 4 HOH 18 218 48 HOH HOH A . I 4 HOH 19 219 55 HOH HOH A . I 4 HOH 20 220 63 HOH HOH A . I 4 HOH 21 221 72 HOH HOH A . I 4 HOH 22 222 79 HOH HOH A . I 4 HOH 23 223 81 HOH HOH A . J 4 HOH 1 101 70 HOH HOH B . K 4 HOH 1 201 4 HOH HOH C . K 4 HOH 2 202 7 HOH HOH C . K 4 HOH 3 203 11 HOH HOH C . K 4 HOH 4 204 13 HOH HOH C . K 4 HOH 5 205 14 HOH HOH C . K 4 HOH 6 206 15 HOH HOH C . K 4 HOH 7 207 25 HOH HOH C . K 4 HOH 8 208 28 HOH HOH C . K 4 HOH 9 209 29 HOH HOH C . K 4 HOH 10 210 36 HOH HOH C . K 4 HOH 11 211 39 HOH HOH C . K 4 HOH 12 212 42 HOH HOH C . K 4 HOH 13 213 50 HOH HOH C . K 4 HOH 14 214 59 HOH HOH C . K 4 HOH 15 215 61 HOH HOH C . K 4 HOH 16 216 71 HOH HOH C . K 4 HOH 17 217 73 HOH HOH C . K 4 HOH 18 218 74 HOH HOH C . L 4 HOH 1 101 65 HOH HOH D . M 4 HOH 1 301 1 HOH HOH E . M 4 HOH 2 302 17 HOH HOH E . M 4 HOH 3 303 19 HOH HOH E . M 4 HOH 4 304 20 HOH HOH E . M 4 HOH 5 305 22 HOH HOH E . M 4 HOH 6 306 26 HOH HOH E . M 4 HOH 7 307 32 HOH HOH E . M 4 HOH 8 308 33 HOH HOH E . M 4 HOH 9 309 34 HOH HOH E . M 4 HOH 10 310 38 HOH HOH E . M 4 HOH 11 311 40 HOH HOH E . M 4 HOH 12 312 43 HOH HOH E . M 4 HOH 13 313 45 HOH HOH E . M 4 HOH 14 314 51 HOH HOH E . M 4 HOH 15 315 52 HOH HOH E . M 4 HOH 16 316 53 HOH HOH E . M 4 HOH 17 317 54 HOH HOH E . M 4 HOH 18 318 57 HOH HOH E . M 4 HOH 19 319 62 HOH HOH E . M 4 HOH 20 320 64 HOH HOH E . M 4 HOH 21 321 66 HOH HOH E . M 4 HOH 22 322 68 HOH HOH E . M 4 HOH 23 323 77 HOH HOH E . N 4 HOH 1 101 44 HOH HOH F . N 4 HOH 2 102 60 HOH HOH F . N 4 HOH 3 103 80 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,J 2 1 C,D,K,L 3 1 E,F,G,H,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1180 ? 1 MORE -8 ? 1 'SSA (A^2)' 4050 ? 2 'ABSA (A^2)' 1150 ? 2 MORE -8 ? 2 'SSA (A^2)' 4140 ? 3 'ABSA (A^2)' 1440 ? 3 MORE -8 ? 3 'SSA (A^2)' 4170 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 202 ? I HOH . 2 1 A HOH 204 ? I HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-01-29 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 2 'Structure model' '_struct_ref_seq_dif.details' 5 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SAINT . ? package ? ? 'data scaling' http://www.bruker-axs.de/ ? ? 2 SCALA . ? other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 SAINT . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ALA _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 1 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.07 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 59 ? A MET 1 2 1 Y 1 A GLU 60 ? A GLU 2 3 1 Y 1 A ASN 61 ? A ASN 3 4 1 Y 1 A ASP 62 ? A ASP 4 5 1 Y 1 A PRO 63 ? A PRO 5 6 1 Y 1 A ASN 64 ? A ASN 6 7 1 Y 1 A SER 121 ? A SER 63 8 1 Y 1 C MET 59 ? C MET 1 9 1 Y 1 C GLU 60 ? C GLU 2 10 1 Y 1 C ASN 61 ? C ASN 3 11 1 Y 1 C ASP 62 ? C ASP 4 12 1 Y 1 C PRO 63 ? C PRO 5 13 1 Y 1 C ASN 64 ? C ASN 6 14 1 Y 1 C SER 121 ? C SER 63 15 1 Y 1 E MET 59 ? E MET 1 16 1 Y 1 E GLU 60 ? E GLU 2 17 1 Y 1 E ASN 61 ? E ASN 3 18 1 Y 1 E ASP 62 ? E ASP 4 19 1 Y 1 E PRO 63 ? E PRO 5 20 1 Y 1 E SER 121 ? E SER 63 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 GOL C1 C N N 144 GOL O1 O N N 145 GOL C2 C N N 146 GOL O2 O N N 147 GOL C3 C N N 148 GOL O3 O N N 149 GOL H11 H N N 150 GOL H12 H N N 151 GOL HO1 H N N 152 GOL H2 H N N 153 GOL HO2 H N N 154 GOL H31 H N N 155 GOL H32 H N N 156 GOL HO3 H N N 157 HIS N N N N 158 HIS CA C N S 159 HIS C C N N 160 HIS O O N N 161 HIS CB C N N 162 HIS CG C Y N 163 HIS ND1 N Y N 164 HIS CD2 C Y N 165 HIS CE1 C Y N 166 HIS NE2 N Y N 167 HIS OXT O N N 168 HIS H H N N 169 HIS H2 H N N 170 HIS HA H N N 171 HIS HB2 H N N 172 HIS HB3 H N N 173 HIS HD1 H N N 174 HIS HD2 H N N 175 HIS HE1 H N N 176 HIS HE2 H N N 177 HIS HXT H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 PHE N N N N 271 PHE CA C N S 272 PHE C C N N 273 PHE O O N N 274 PHE CB C N N 275 PHE CG C Y N 276 PHE CD1 C Y N 277 PHE CD2 C Y N 278 PHE CE1 C Y N 279 PHE CE2 C Y N 280 PHE CZ C Y N 281 PHE OXT O N N 282 PHE H H N N 283 PHE H2 H N N 284 PHE HA H N N 285 PHE HB2 H N N 286 PHE HB3 H N N 287 PHE HD1 H N N 288 PHE HD2 H N N 289 PHE HE1 H N N 290 PHE HE2 H N N 291 PHE HZ H N N 292 PHE HXT H N N 293 PRO N N N N 294 PRO CA C N S 295 PRO C C N N 296 PRO O O N N 297 PRO CB C N N 298 PRO CG C N N 299 PRO CD C N N 300 PRO OXT O N N 301 PRO H H N N 302 PRO HA H N N 303 PRO HB2 H N N 304 PRO HB3 H N N 305 PRO HG2 H N N 306 PRO HG3 H N N 307 PRO HD2 H N N 308 PRO HD3 H N N 309 PRO HXT H N N 310 SER N N N N 311 SER CA C N S 312 SER C C N N 313 SER O O N N 314 SER CB C N N 315 SER OG O N N 316 SER OXT O N N 317 SER H H N N 318 SER H2 H N N 319 SER HA H N N 320 SER HB2 H N N 321 SER HB3 H N N 322 SER HG H N N 323 SER HXT H N N 324 THR N N N N 325 THR CA C N S 326 THR C C N N 327 THR O O N N 328 THR CB C N R 329 THR OG1 O N N 330 THR CG2 C N N 331 THR OXT O N N 332 THR H H N N 333 THR H2 H N N 334 THR HA H N N 335 THR HB H N N 336 THR HG1 H N N 337 THR HG21 H N N 338 THR HG22 H N N 339 THR HG23 H N N 340 THR HXT H N N 341 TRP N N N N 342 TRP CA C N S 343 TRP C C N N 344 TRP O O N N 345 TRP CB C N N 346 TRP CG C Y N 347 TRP CD1 C Y N 348 TRP CD2 C Y N 349 TRP NE1 N Y N 350 TRP CE2 C Y N 351 TRP CE3 C Y N 352 TRP CZ2 C Y N 353 TRP CZ3 C Y N 354 TRP CH2 C Y N 355 TRP OXT O N N 356 TRP H H N N 357 TRP H2 H N N 358 TRP HA H N N 359 TRP HB2 H N N 360 TRP HB3 H N N 361 TRP HD1 H N N 362 TRP HE1 H N N 363 TRP HE3 H N N 364 TRP HZ2 H N N 365 TRP HZ3 H N N 366 TRP HH2 H N N 367 TRP HXT H N N 368 TYR N N N N 369 TYR CA C N S 370 TYR C C N N 371 TYR O O N N 372 TYR CB C N N 373 TYR CG C Y N 374 TYR CD1 C Y N 375 TYR CD2 C Y N 376 TYR CE1 C Y N 377 TYR CE2 C Y N 378 TYR CZ C Y N 379 TYR OH O N N 380 TYR OXT O N N 381 TYR H H N N 382 TYR H2 H N N 383 TYR HA H N N 384 TYR HB2 H N N 385 TYR HB3 H N N 386 TYR HD1 H N N 387 TYR HD2 H N N 388 TYR HE1 H N N 389 TYR HE2 H N N 390 TYR HH H N N 391 TYR HXT H N N 392 VAL N N N N 393 VAL CA C N S 394 VAL C C N N 395 VAL O O N N 396 VAL CB C N N 397 VAL CG1 C N N 398 VAL CG2 C N N 399 VAL OXT O N N 400 VAL H H N N 401 VAL H2 H N N 402 VAL HA H N N 403 VAL HB H N N 404 VAL HG11 H N N 405 VAL HG12 H N N 406 VAL HG13 H N N 407 VAL HG21 H N N 408 VAL HG22 H N N 409 VAL HG23 H N N 410 VAL HXT H N N 411 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 GOL C1 O1 sing N N 135 GOL C1 C2 sing N N 136 GOL C1 H11 sing N N 137 GOL C1 H12 sing N N 138 GOL O1 HO1 sing N N 139 GOL C2 O2 sing N N 140 GOL C2 C3 sing N N 141 GOL C2 H2 sing N N 142 GOL O2 HO2 sing N N 143 GOL C3 O3 sing N N 144 GOL C3 H31 sing N N 145 GOL C3 H32 sing N N 146 GOL O3 HO3 sing N N 147 HIS N CA sing N N 148 HIS N H sing N N 149 HIS N H2 sing N N 150 HIS CA C sing N N 151 HIS CA CB sing N N 152 HIS CA HA sing N N 153 HIS C O doub N N 154 HIS C OXT sing N N 155 HIS CB CG sing N N 156 HIS CB HB2 sing N N 157 HIS CB HB3 sing N N 158 HIS CG ND1 sing Y N 159 HIS CG CD2 doub Y N 160 HIS ND1 CE1 doub Y N 161 HIS ND1 HD1 sing N N 162 HIS CD2 NE2 sing Y N 163 HIS CD2 HD2 sing N N 164 HIS CE1 NE2 sing Y N 165 HIS CE1 HE1 sing N N 166 HIS NE2 HE2 sing N N 167 HIS OXT HXT sing N N 168 HOH O H1 sing N N 169 HOH O H2 sing N N 170 ILE N CA sing N N 171 ILE N H sing N N 172 ILE N H2 sing N N 173 ILE CA C sing N N 174 ILE CA CB sing N N 175 ILE CA HA sing N N 176 ILE C O doub N N 177 ILE C OXT sing N N 178 ILE CB CG1 sing N N 179 ILE CB CG2 sing N N 180 ILE CB HB sing N N 181 ILE CG1 CD1 sing N N 182 ILE CG1 HG12 sing N N 183 ILE CG1 HG13 sing N N 184 ILE CG2 HG21 sing N N 185 ILE CG2 HG22 sing N N 186 ILE CG2 HG23 sing N N 187 ILE CD1 HD11 sing N N 188 ILE CD1 HD12 sing N N 189 ILE CD1 HD13 sing N N 190 ILE OXT HXT sing N N 191 LEU N CA sing N N 192 LEU N H sing N N 193 LEU N H2 sing N N 194 LEU CA C sing N N 195 LEU CA CB sing N N 196 LEU CA HA sing N N 197 LEU C O doub N N 198 LEU C OXT sing N N 199 LEU CB CG sing N N 200 LEU CB HB2 sing N N 201 LEU CB HB3 sing N N 202 LEU CG CD1 sing N N 203 LEU CG CD2 sing N N 204 LEU CG HG sing N N 205 LEU CD1 HD11 sing N N 206 LEU CD1 HD12 sing N N 207 LEU CD1 HD13 sing N N 208 LEU CD2 HD21 sing N N 209 LEU CD2 HD22 sing N N 210 LEU CD2 HD23 sing N N 211 LEU OXT HXT sing N N 212 LYS N CA sing N N 213 LYS N H sing N N 214 LYS N H2 sing N N 215 LYS CA C sing N N 216 LYS CA CB sing N N 217 LYS CA HA sing N N 218 LYS C O doub N N 219 LYS C OXT sing N N 220 LYS CB CG sing N N 221 LYS CB HB2 sing N N 222 LYS CB HB3 sing N N 223 LYS CG CD sing N N 224 LYS CG HG2 sing N N 225 LYS CG HG3 sing N N 226 LYS CD CE sing N N 227 LYS CD HD2 sing N N 228 LYS CD HD3 sing N N 229 LYS CE NZ sing N N 230 LYS CE HE2 sing N N 231 LYS CE HE3 sing N N 232 LYS NZ HZ1 sing N N 233 LYS NZ HZ2 sing N N 234 LYS NZ HZ3 sing N N 235 LYS OXT HXT sing N N 236 MET N CA sing N N 237 MET N H sing N N 238 MET N H2 sing N N 239 MET CA C sing N N 240 MET CA CB sing N N 241 MET CA HA sing N N 242 MET C O doub N N 243 MET C OXT sing N N 244 MET CB CG sing N N 245 MET CB HB2 sing N N 246 MET CB HB3 sing N N 247 MET CG SD sing N N 248 MET CG HG2 sing N N 249 MET CG HG3 sing N N 250 MET SD CE sing N N 251 MET CE HE1 sing N N 252 MET CE HE2 sing N N 253 MET CE HE3 sing N N 254 MET OXT HXT sing N N 255 PHE N CA sing N N 256 PHE N H sing N N 257 PHE N H2 sing N N 258 PHE CA C sing N N 259 PHE CA CB sing N N 260 PHE CA HA sing N N 261 PHE C O doub N N 262 PHE C OXT sing N N 263 PHE CB CG sing N N 264 PHE CB HB2 sing N N 265 PHE CB HB3 sing N N 266 PHE CG CD1 doub Y N 267 PHE CG CD2 sing Y N 268 PHE CD1 CE1 sing Y N 269 PHE CD1 HD1 sing N N 270 PHE CD2 CE2 doub Y N 271 PHE CD2 HD2 sing N N 272 PHE CE1 CZ doub Y N 273 PHE CE1 HE1 sing N N 274 PHE CE2 CZ sing Y N 275 PHE CE2 HE2 sing N N 276 PHE CZ HZ sing N N 277 PHE OXT HXT sing N N 278 PRO N CA sing N N 279 PRO N CD sing N N 280 PRO N H sing N N 281 PRO CA C sing N N 282 PRO CA CB sing N N 283 PRO CA HA sing N N 284 PRO C O doub N N 285 PRO C OXT sing N N 286 PRO CB CG sing N N 287 PRO CB HB2 sing N N 288 PRO CB HB3 sing N N 289 PRO CG CD sing N N 290 PRO CG HG2 sing N N 291 PRO CG HG3 sing N N 292 PRO CD HD2 sing N N 293 PRO CD HD3 sing N N 294 PRO OXT HXT sing N N 295 SER N CA sing N N 296 SER N H sing N N 297 SER N H2 sing N N 298 SER CA C sing N N 299 SER CA CB sing N N 300 SER CA HA sing N N 301 SER C O doub N N 302 SER C OXT sing N N 303 SER CB OG sing N N 304 SER CB HB2 sing N N 305 SER CB HB3 sing N N 306 SER OG HG sing N N 307 SER OXT HXT sing N N 308 THR N CA sing N N 309 THR N H sing N N 310 THR N H2 sing N N 311 THR CA C sing N N 312 THR CA CB sing N N 313 THR CA HA sing N N 314 THR C O doub N N 315 THR C OXT sing N N 316 THR CB OG1 sing N N 317 THR CB CG2 sing N N 318 THR CB HB sing N N 319 THR OG1 HG1 sing N N 320 THR CG2 HG21 sing N N 321 THR CG2 HG22 sing N N 322 THR CG2 HG23 sing N N 323 THR OXT HXT sing N N 324 TRP N CA sing N N 325 TRP N H sing N N 326 TRP N H2 sing N N 327 TRP CA C sing N N 328 TRP CA CB sing N N 329 TRP CA HA sing N N 330 TRP C O doub N N 331 TRP C OXT sing N N 332 TRP CB CG sing N N 333 TRP CB HB2 sing N N 334 TRP CB HB3 sing N N 335 TRP CG CD1 doub Y N 336 TRP CG CD2 sing Y N 337 TRP CD1 NE1 sing Y N 338 TRP CD1 HD1 sing N N 339 TRP CD2 CE2 doub Y N 340 TRP CD2 CE3 sing Y N 341 TRP NE1 CE2 sing Y N 342 TRP NE1 HE1 sing N N 343 TRP CE2 CZ2 sing Y N 344 TRP CE3 CZ3 doub Y N 345 TRP CE3 HE3 sing N N 346 TRP CZ2 CH2 doub Y N 347 TRP CZ2 HZ2 sing N N 348 TRP CZ3 CH2 sing Y N 349 TRP CZ3 HZ3 sing N N 350 TRP CH2 HH2 sing N N 351 TRP OXT HXT sing N N 352 TYR N CA sing N N 353 TYR N H sing N N 354 TYR N H2 sing N N 355 TYR CA C sing N N 356 TYR CA CB sing N N 357 TYR CA HA sing N N 358 TYR C O doub N N 359 TYR C OXT sing N N 360 TYR CB CG sing N N 361 TYR CB HB2 sing N N 362 TYR CB HB3 sing N N 363 TYR CG CD1 doub Y N 364 TYR CG CD2 sing Y N 365 TYR CD1 CE1 sing Y N 366 TYR CD1 HD1 sing N N 367 TYR CD2 CE2 doub Y N 368 TYR CD2 HD2 sing N N 369 TYR CE1 CZ doub Y N 370 TYR CE1 HE1 sing N N 371 TYR CE2 CZ sing Y N 372 TYR CE2 HE2 sing N N 373 TYR CZ OH sing N N 374 TYR OH HH sing N N 375 TYR OXT HXT sing N N 376 VAL N CA sing N N 377 VAL N H sing N N 378 VAL N H2 sing N N 379 VAL CA C sing N N 380 VAL CA CB sing N N 381 VAL CA HA sing N N 382 VAL C O doub N N 383 VAL C OXT sing N N 384 VAL CB CG1 sing N N 385 VAL CB CG2 sing N N 386 VAL CB HB sing N N 387 VAL CG1 HG11 sing N N 388 VAL CG1 HG12 sing N N 389 VAL CG1 HG13 sing N N 390 VAL CG2 HG21 sing N N 391 VAL CG2 HG22 sing N N 392 VAL CG2 HG23 sing N N 393 VAL OXT HXT sing N N 394 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2O88 _pdbx_initial_refinement_model.details ? #