data_4JC1 # _entry.id 4JC1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JC1 pdb_00004jc1 10.2210/pdb4jc1/pdb RCSB RCSB077856 ? ? WWPDB D_1000077856 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4JCK _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JC1 _pdbx_database_status.recvd_initial_deposition_date 2013-02-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Collins, P.M.' 1 'Blanchard, H.' 2 # _citation.id primary _citation.title 'Investigation into the feasibility of thioditaloside as a novel scaffold for galectin-3-specific inhibitors.' _citation.journal_abbrev Chembiochem _citation.journal_volume 14 _citation.page_first 1331 _citation.page_last 1342 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23864426 _citation.pdbx_database_id_DOI 10.1002/cbic.201300245 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bum-Erdene, K.' 1 ? primary 'Gagarinov, I.A.' 2 ? primary 'Collins, P.M.' 3 ? primary 'Winger, M.' 4 ? primary 'Pearson, A.G.' 5 ? primary 'Wilson, J.C.' 6 ? primary 'Leffler, H.' 7 ? primary 'Nilsson, U.J.' 8 ? primary 'Grice, I.D.' 9 ? primary 'Blanchard, H.' 10 ? # _cell.entry_id 4JC1 _cell.length_a 36.788 _cell.length_b 58.003 _cell.length_c 63.378 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JC1 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 16054.424 1 ? ? 'galectin-3: unp residues 108-250' ? 2 branched man 'beta-D-galactopyranose-(1-1)-1-thio-beta-D-galactopyranose' 358.362 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 5 ? ? ? ? 4 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Gal-3, 35 kDa lectin, Carbohydrate-binding protein 35, CBP 35, Galactose-specific lectin 3, Galactoside-binding protein, GALBP, IgE-binding protein, L-31, Laminin-binding protein, Lectin L-29, Mac-2 antigen ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQ SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;GAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQ SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 PRO n 1 4 ALA n 1 5 GLY n 1 6 PRO n 1 7 LEU n 1 8 ILE n 1 9 VAL n 1 10 PRO n 1 11 TYR n 1 12 ASN n 1 13 LEU n 1 14 PRO n 1 15 LEU n 1 16 PRO n 1 17 GLY n 1 18 GLY n 1 19 VAL n 1 20 VAL n 1 21 PRO n 1 22 ARG n 1 23 MET n 1 24 LEU n 1 25 ILE n 1 26 THR n 1 27 ILE n 1 28 LEU n 1 29 GLY n 1 30 THR n 1 31 VAL n 1 32 LYS n 1 33 PRO n 1 34 ASN n 1 35 ALA n 1 36 ASN n 1 37 ARG n 1 38 ILE n 1 39 ALA n 1 40 LEU n 1 41 ASP n 1 42 PHE n 1 43 GLN n 1 44 ARG n 1 45 GLY n 1 46 ASN n 1 47 ASP n 1 48 VAL n 1 49 ALA n 1 50 PHE n 1 51 HIS n 1 52 PHE n 1 53 ASN n 1 54 PRO n 1 55 ARG n 1 56 PHE n 1 57 ASN n 1 58 GLU n 1 59 ASN n 1 60 ASN n 1 61 ARG n 1 62 ARG n 1 63 VAL n 1 64 ILE n 1 65 VAL n 1 66 CYS n 1 67 ASN n 1 68 THR n 1 69 LYS n 1 70 LEU n 1 71 ASP n 1 72 ASN n 1 73 ASN n 1 74 TRP n 1 75 GLY n 1 76 ARG n 1 77 GLU n 1 78 GLU n 1 79 ARG n 1 80 GLN n 1 81 SER n 1 82 VAL n 1 83 PHE n 1 84 PRO n 1 85 PHE n 1 86 GLU n 1 87 SER n 1 88 GLY n 1 89 LYS n 1 90 PRO n 1 91 PHE n 1 92 LYS n 1 93 ILE n 1 94 GLN n 1 95 VAL n 1 96 LEU n 1 97 VAL n 1 98 GLU n 1 99 PRO n 1 100 ASP n 1 101 HIS n 1 102 PHE n 1 103 LYS n 1 104 VAL n 1 105 ALA n 1 106 VAL n 1 107 ASN n 1 108 ASP n 1 109 ALA n 1 110 HIS n 1 111 LEU n 1 112 LEU n 1 113 GLN n 1 114 TYR n 1 115 ASN n 1 116 HIS n 1 117 ARG n 1 118 VAL n 1 119 LYS n 1 120 LYS n 1 121 LEU n 1 122 ASN n 1 123 GLU n 1 124 ILE n 1 125 SER n 1 126 LYS n 1 127 LEU n 1 128 GLY n 1 129 ILE n 1 130 SER n 1 131 GLY n 1 132 ASP n 1 133 ILE n 1 134 ASP n 1 135 LEU n 1 136 THR n 1 137 SER n 1 138 ALA n 1 139 SER n 1 140 TYR n 1 141 THR n 1 142 MET n 1 143 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQ SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 108 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4JC1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 143 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 108 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 108 _struct_ref_seq.pdbx_auth_seq_align_end 250 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YIO 'D-saccharide, beta linking' . 1-thio-beta-D-galactopyranose '(2R,3R,4S,5R,6S)-2-(HYDROXYMETHYL)-6-SULFANYL-OXANE-3,4,5-TRIOL; 1-thio-beta-D-galactose; 1-thio-D-galactose; 1-thio-galactose' 'C6 H12 O5 S' 196.221 # _exptl.entry_id 4JC1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;Hanging drops consisting of equal volumes of protein solution (100 mM lactose in PBS pH 7.5 supplemented with 2 mM CaCl2 and a protein concentration of 10 mg ml 1) and reservoir solution [100 mM Tris HCl, 31%(w/v) PEG 6000, 100 mM MgCl2 and 8 mM -mercaptoethanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.pdbx_collection_date 2011-06-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type MACSCIENCE _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4JC1 _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 58.0 _reflns.d_resolution_high 1.5 _reflns.number_obs 21329 _reflns.number_all 115029 _reflns.percent_possible_obs 95.5 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 84.1 _reflns_shell.Rmerge_I_obs 0.142 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 1.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4JC1 _refine.ls_number_reflns_obs 20202 _refine.ls_number_reflns_all 21329 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.79 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 95.14 _refine.ls_R_factor_obs 0.13609 _refine.ls_R_factor_all 0.18 _refine.ls_R_factor_R_work 0.13537 _refine.ls_R_factor_R_free 0.14938 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1085 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.972 _refine.B_iso_mean 11.799 _refine.aniso_B[1][1] 0.77 _refine.aniso_B[2][2] -0.60 _refine.aniso_B[3][3] -0.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'pdb entry 1A3K' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.091 _refine.pdbx_overall_ESU_R_Free 0.061 _refine.overall_SU_ML 0.034 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.971 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1108 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 1271 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 42.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.019 ? 1311 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 912 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.309 1.944 ? 1791 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.782 3.000 ? 2232 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.752 5.000 ? 167 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.087 0.200 ? 198 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 1471 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.002 0.020 ? 268 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3.465 3.000 ? 7128 ? 'X-RAY DIFFRACTION' r_sphericity_free 9.118 5.000 ? 140 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 5.214 5.000 ? 2181 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 1230 _refine_ls_shell.R_factor_R_work 0.142 _refine_ls_shell.percent_reflns_obs 80.46 _refine_ls_shell.R_factor_R_free 0.176 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4JC1 _struct.title 'Galectin-3 carbohydrate recognition domain in complex with thiodigalactoside' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JC1 _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'beta sandwich, carbohydrate binding protein, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 120 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 124 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id YIO _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id S1 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id GAL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id YIO _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id GAL _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.764 _struct_conn.pdbx_value_order sing _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 9 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 116 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 10 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 117 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.37 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 11 ? PRO A 14 ? TYR A 118 PRO A 121 A 2 LYS A 126 ? GLY A 131 ? LYS A 233 GLY A 238 A 3 ILE A 38 ? ARG A 44 ? ILE A 145 ARG A 151 A 4 ASP A 47 ? GLU A 58 ? ASP A 154 GLU A 165 A 5 ARG A 61 ? LEU A 70 ? ARG A 168 LEU A 177 A 6 ASN A 73 ? TRP A 74 ? ASN A 180 TRP A 181 B 1 TYR A 11 ? PRO A 14 ? TYR A 118 PRO A 121 B 2 LYS A 126 ? GLY A 131 ? LYS A 233 GLY A 238 B 3 ILE A 38 ? ARG A 44 ? ILE A 145 ARG A 151 B 4 ASP A 47 ? GLU A 58 ? ASP A 154 GLU A 165 B 5 ARG A 61 ? LEU A 70 ? ARG A 168 LEU A 177 B 6 GLU A 78 ? GLN A 80 ? GLU A 185 GLN A 187 C 1 ALA A 109 ? ASN A 115 ? ALA A 216 ASN A 222 C 2 HIS A 101 ? VAL A 106 ? HIS A 208 VAL A 213 C 3 PRO A 90 ? VAL A 97 ? PRO A 197 VAL A 204 C 4 MET A 23 ? VAL A 31 ? MET A 130 VAL A 138 C 5 ILE A 133 ? MET A 142 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 13 ? N LEU A 120 O LEU A 127 ? O LEU A 234 A 2 3 O LYS A 126 ? O LYS A 233 N GLN A 43 ? N GLN A 150 A 3 4 N PHE A 42 ? N PHE A 149 O PHE A 50 ? O PHE A 157 A 4 5 N ARG A 55 ? N ARG A 162 O VAL A 63 ? O VAL A 170 A 5 6 N LEU A 70 ? N LEU A 177 O ASN A 73 ? O ASN A 180 B 1 2 N LEU A 13 ? N LEU A 120 O LEU A 127 ? O LEU A 234 B 2 3 O LYS A 126 ? O LYS A 233 N GLN A 43 ? N GLN A 150 B 3 4 N PHE A 42 ? N PHE A 149 O PHE A 50 ? O PHE A 157 B 4 5 N ARG A 55 ? N ARG A 162 O VAL A 63 ? O VAL A 170 B 5 6 N ILE A 64 ? N ILE A 171 O GLN A 80 ? O GLN A 187 C 1 2 O LEU A 111 ? O LEU A 218 N VAL A 104 ? N VAL A 211 C 2 3 O ALA A 105 ? O ALA A 212 N GLN A 94 ? N GLN A 201 C 3 4 O VAL A 95 ? O VAL A 202 N ILE A 25 ? N ILE A 132 C 4 5 N LEU A 24 ? N LEU A 131 O THR A 141 ? O THR A 248 # _database_PDB_matrix.entry_id 4JC1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4JC1 _atom_sites.fract_transf_matrix[1][1] 0.027183 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017241 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015778 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 108 ? ? ? A . n A 1 2 ALA 2 109 ? ? ? A . n A 1 3 PRO 3 110 ? ? ? A . n A 1 4 ALA 4 111 ? ? ? A . n A 1 5 GLY 5 112 ? ? ? A . n A 1 6 PRO 6 113 113 PRO PRO A . n A 1 7 LEU 7 114 114 LEU LEU A . n A 1 8 ILE 8 115 115 ILE ILE A . n A 1 9 VAL 9 116 116 VAL VAL A . n A 1 10 PRO 10 117 117 PRO PRO A . n A 1 11 TYR 11 118 118 TYR TYR A . n A 1 12 ASN 12 119 119 ASN ASN A . n A 1 13 LEU 13 120 120 LEU LEU A . n A 1 14 PRO 14 121 121 PRO PRO A . n A 1 15 LEU 15 122 122 LEU LEU A . n A 1 16 PRO 16 123 123 PRO PRO A . n A 1 17 GLY 17 124 124 GLY GLY A . n A 1 18 GLY 18 125 125 GLY GLY A . n A 1 19 VAL 19 126 126 VAL VAL A . n A 1 20 VAL 20 127 127 VAL VAL A . n A 1 21 PRO 21 128 128 PRO PRO A . n A 1 22 ARG 22 129 129 ARG ARG A . n A 1 23 MET 23 130 130 MET MET A . n A 1 24 LEU 24 131 131 LEU LEU A . n A 1 25 ILE 25 132 132 ILE ILE A . n A 1 26 THR 26 133 133 THR THR A . n A 1 27 ILE 27 134 134 ILE ILE A . n A 1 28 LEU 28 135 135 LEU LEU A . n A 1 29 GLY 29 136 136 GLY GLY A . n A 1 30 THR 30 137 137 THR THR A . n A 1 31 VAL 31 138 138 VAL VAL A . n A 1 32 LYS 32 139 139 LYS LYS A . n A 1 33 PRO 33 140 140 PRO PRO A . n A 1 34 ASN 34 141 141 ASN ASN A . n A 1 35 ALA 35 142 142 ALA ALA A . n A 1 36 ASN 36 143 143 ASN ASN A . n A 1 37 ARG 37 144 144 ARG ARG A . n A 1 38 ILE 38 145 145 ILE ILE A . n A 1 39 ALA 39 146 146 ALA ALA A . n A 1 40 LEU 40 147 147 LEU LEU A . n A 1 41 ASP 41 148 148 ASP ASP A . n A 1 42 PHE 42 149 149 PHE PHE A . n A 1 43 GLN 43 150 150 GLN GLN A . n A 1 44 ARG 44 151 151 ARG ARG A . n A 1 45 GLY 45 152 152 GLY GLY A . n A 1 46 ASN 46 153 153 ASN ASN A . n A 1 47 ASP 47 154 154 ASP ASP A . n A 1 48 VAL 48 155 155 VAL VAL A . n A 1 49 ALA 49 156 156 ALA ALA A . n A 1 50 PHE 50 157 157 PHE PHE A . n A 1 51 HIS 51 158 158 HIS HIS A . n A 1 52 PHE 52 159 159 PHE PHE A . n A 1 53 ASN 53 160 160 ASN ASN A . n A 1 54 PRO 54 161 161 PRO PRO A . n A 1 55 ARG 55 162 162 ARG ARG A . n A 1 56 PHE 56 163 163 PHE PHE A . n A 1 57 ASN 57 164 164 ASN ASN A . n A 1 58 GLU 58 165 165 GLU GLU A . n A 1 59 ASN 59 166 166 ASN ASN A . n A 1 60 ASN 60 167 167 ASN ASN A . n A 1 61 ARG 61 168 168 ARG ARG A . n A 1 62 ARG 62 169 169 ARG ARG A . n A 1 63 VAL 63 170 170 VAL VAL A . n A 1 64 ILE 64 171 171 ILE ILE A . n A 1 65 VAL 65 172 172 VAL VAL A . n A 1 66 CYS 66 173 173 CYS CYS A . n A 1 67 ASN 67 174 174 ASN ASN A . n A 1 68 THR 68 175 175 THR THR A . n A 1 69 LYS 69 176 176 LYS LYS A . n A 1 70 LEU 70 177 177 LEU LEU A . n A 1 71 ASP 71 178 178 ASP ASP A . n A 1 72 ASN 72 179 179 ASN ASN A . n A 1 73 ASN 73 180 180 ASN ASN A . n A 1 74 TRP 74 181 181 TRP TRP A . n A 1 75 GLY 75 182 182 GLY GLY A . n A 1 76 ARG 76 183 183 ARG ARG A . n A 1 77 GLU 77 184 184 GLU GLU A . n A 1 78 GLU 78 185 185 GLU GLU A . n A 1 79 ARG 79 186 186 ARG ARG A . n A 1 80 GLN 80 187 187 GLN GLN A . n A 1 81 SER 81 188 188 SER SER A . n A 1 82 VAL 82 189 189 VAL VAL A . n A 1 83 PHE 83 190 190 PHE PHE A . n A 1 84 PRO 84 191 191 PRO PRO A . n A 1 85 PHE 85 192 192 PHE PHE A . n A 1 86 GLU 86 193 193 GLU GLU A . n A 1 87 SER 87 194 194 SER SER A . n A 1 88 GLY 88 195 195 GLY GLY A . n A 1 89 LYS 89 196 196 LYS LYS A . n A 1 90 PRO 90 197 197 PRO PRO A . n A 1 91 PHE 91 198 198 PHE PHE A . n A 1 92 LYS 92 199 199 LYS LYS A . n A 1 93 ILE 93 200 200 ILE ILE A . n A 1 94 GLN 94 201 201 GLN GLN A . n A 1 95 VAL 95 202 202 VAL VAL A . n A 1 96 LEU 96 203 203 LEU LEU A . n A 1 97 VAL 97 204 204 VAL VAL A . n A 1 98 GLU 98 205 205 GLU GLU A . n A 1 99 PRO 99 206 206 PRO PRO A . n A 1 100 ASP 100 207 207 ASP ASP A . n A 1 101 HIS 101 208 208 HIS HIS A . n A 1 102 PHE 102 209 209 PHE PHE A . n A 1 103 LYS 103 210 210 LYS LYS A . n A 1 104 VAL 104 211 211 VAL VAL A . n A 1 105 ALA 105 212 212 ALA ALA A . n A 1 106 VAL 106 213 213 VAL VAL A . n A 1 107 ASN 107 214 214 ASN ASN A . n A 1 108 ASP 108 215 215 ASP ASP A . n A 1 109 ALA 109 216 216 ALA ALA A . n A 1 110 HIS 110 217 217 HIS HIS A . n A 1 111 LEU 111 218 218 LEU LEU A . n A 1 112 LEU 112 219 219 LEU LEU A . n A 1 113 GLN 113 220 220 GLN GLN A . n A 1 114 TYR 114 221 221 TYR TYR A . n A 1 115 ASN 115 222 222 ASN ASN A . n A 1 116 HIS 116 223 223 HIS HIS A . n A 1 117 ARG 117 224 224 ARG ARG A . n A 1 118 VAL 118 225 225 VAL VAL A . n A 1 119 LYS 119 226 226 LYS LYS A . n A 1 120 LYS 120 227 227 LYS LYS A . n A 1 121 LEU 121 228 228 LEU LEU A . n A 1 122 ASN 122 229 229 ASN ASN A . n A 1 123 GLU 123 230 230 GLU GLU A . n A 1 124 ILE 124 231 231 ILE ILE A . n A 1 125 SER 125 232 232 SER SER A . n A 1 126 LYS 126 233 233 LYS LYS A . n A 1 127 LEU 127 234 234 LEU LEU A . n A 1 128 GLY 128 235 235 GLY GLY A . n A 1 129 ILE 129 236 236 ILE ILE A . n A 1 130 SER 130 237 237 SER SER A . n A 1 131 GLY 131 238 238 GLY GLY A . n A 1 132 ASP 132 239 239 ASP ASP A . n A 1 133 ILE 133 240 240 ILE ILE A . n A 1 134 ASP 134 241 241 ASP ASP A . n A 1 135 LEU 135 242 242 LEU LEU A . n A 1 136 THR 136 243 243 THR THR A . n A 1 137 SER 137 244 244 SER SER A . n A 1 138 ALA 138 245 245 ALA ALA A . n A 1 139 SER 139 246 246 SER SER A . n A 1 140 TYR 140 247 247 TYR TYR A . n A 1 141 THR 141 248 248 THR THR A . n A 1 142 MET 142 249 249 MET MET A . n A 1 143 ILE 143 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 301 1 CL CL A . D 3 CL 1 302 1 CL CL A . E 3 CL 1 304 1 CL CL A . F 3 CL 1 305 1 CL CL A . G 3 CL 1 306 1 CL CL A . H 4 HOH 1 401 1 HOH HOH A . H 4 HOH 2 402 2 HOH HOH A . H 4 HOH 3 403 3 HOH HOH A . H 4 HOH 4 404 4 HOH HOH A . H 4 HOH 5 405 5 HOH HOH A . H 4 HOH 6 406 6 HOH HOH A . H 4 HOH 7 407 7 HOH HOH A . H 4 HOH 8 408 8 HOH HOH A . H 4 HOH 9 409 9 HOH HOH A . H 4 HOH 10 410 10 HOH HOH A . H 4 HOH 11 411 11 HOH HOH A . H 4 HOH 12 412 12 HOH HOH A . H 4 HOH 13 413 13 HOH HOH A . H 4 HOH 14 414 14 HOH HOH A . H 4 HOH 15 415 15 HOH HOH A . H 4 HOH 16 416 16 HOH HOH A . H 4 HOH 17 417 17 HOH HOH A . H 4 HOH 18 418 18 HOH HOH A . H 4 HOH 19 419 19 HOH HOH A . H 4 HOH 20 420 20 HOH HOH A . H 4 HOH 21 421 21 HOH HOH A . H 4 HOH 22 422 22 HOH HOH A . H 4 HOH 23 423 23 HOH HOH A . H 4 HOH 24 424 24 HOH HOH A . H 4 HOH 25 425 25 HOH HOH A . H 4 HOH 26 426 26 HOH HOH A . H 4 HOH 27 427 27 HOH HOH A . H 4 HOH 28 428 28 HOH HOH A . H 4 HOH 29 429 29 HOH HOH A . H 4 HOH 30 430 30 HOH HOH A . H 4 HOH 31 431 31 HOH HOH A . H 4 HOH 32 432 32 HOH HOH A . H 4 HOH 33 433 33 HOH HOH A . H 4 HOH 34 434 34 HOH HOH A . H 4 HOH 35 435 35 HOH HOH A . H 4 HOH 36 436 36 HOH HOH A . H 4 HOH 37 437 37 HOH HOH A . H 4 HOH 38 438 38 HOH HOH A . H 4 HOH 39 439 39 HOH HOH A . H 4 HOH 40 440 40 HOH HOH A . H 4 HOH 41 441 41 HOH HOH A . H 4 HOH 42 442 42 HOH HOH A . H 4 HOH 43 443 43 HOH HOH A . H 4 HOH 44 444 44 HOH HOH A . H 4 HOH 45 445 45 HOH HOH A . H 4 HOH 46 446 46 HOH HOH A . H 4 HOH 47 447 47 HOH HOH A . H 4 HOH 48 448 48 HOH HOH A . H 4 HOH 49 449 49 HOH HOH A . H 4 HOH 50 450 50 HOH HOH A . H 4 HOH 51 451 51 HOH HOH A . H 4 HOH 52 452 52 HOH HOH A . H 4 HOH 53 453 53 HOH HOH A . H 4 HOH 54 454 54 HOH HOH A . H 4 HOH 55 455 55 HOH HOH A . H 4 HOH 56 456 56 HOH HOH A . H 4 HOH 57 457 57 HOH HOH A . H 4 HOH 58 458 58 HOH HOH A . H 4 HOH 59 459 59 HOH HOH A . H 4 HOH 60 460 60 HOH HOH A . H 4 HOH 61 461 61 HOH HOH A . H 4 HOH 62 462 62 HOH HOH A . H 4 HOH 63 463 63 HOH HOH A . H 4 HOH 64 464 64 HOH HOH A . H 4 HOH 65 465 65 HOH HOH A . H 4 HOH 66 466 66 HOH HOH A . H 4 HOH 67 467 67 HOH HOH A . H 4 HOH 68 468 68 HOH HOH A . H 4 HOH 69 469 69 HOH HOH A . H 4 HOH 70 470 70 HOH HOH A . H 4 HOH 71 471 71 HOH HOH A . H 4 HOH 72 472 72 HOH HOH A . H 4 HOH 73 473 73 HOH HOH A . H 4 HOH 74 474 74 HOH HOH A . H 4 HOH 75 475 75 HOH HOH A . H 4 HOH 76 476 76 HOH HOH A . H 4 HOH 77 477 77 HOH HOH A . H 4 HOH 78 478 78 HOH HOH A . H 4 HOH 79 479 79 HOH HOH A . H 4 HOH 80 480 80 HOH HOH A . H 4 HOH 81 481 81 HOH HOH A . H 4 HOH 82 482 82 HOH HOH A . H 4 HOH 83 483 83 HOH HOH A . H 4 HOH 84 484 84 HOH HOH A . H 4 HOH 85 485 85 HOH HOH A . H 4 HOH 86 486 86 HOH HOH A . H 4 HOH 87 487 87 HOH HOH A . H 4 HOH 88 488 88 HOH HOH A . H 4 HOH 89 489 89 HOH HOH A . H 4 HOH 90 490 90 HOH HOH A . H 4 HOH 91 491 91 HOH HOH A . H 4 HOH 92 492 92 HOH HOH A . H 4 HOH 93 493 93 HOH HOH A . H 4 HOH 94 494 94 HOH HOH A . H 4 HOH 95 495 95 HOH HOH A . H 4 HOH 96 496 96 HOH HOH A . H 4 HOH 97 497 97 HOH HOH A . H 4 HOH 98 498 98 HOH HOH A . H 4 HOH 99 499 99 HOH HOH A . H 4 HOH 100 500 100 HOH HOH A . H 4 HOH 101 501 102 HOH HOH A . H 4 HOH 102 502 103 HOH HOH A . H 4 HOH 103 503 104 HOH HOH A . H 4 HOH 104 504 105 HOH HOH A . H 4 HOH 105 505 106 HOH HOH A . H 4 HOH 106 506 107 HOH HOH A . H 4 HOH 107 507 108 HOH HOH A . H 4 HOH 108 508 109 HOH HOH A . H 4 HOH 109 509 110 HOH HOH A . H 4 HOH 110 510 111 HOH HOH A . H 4 HOH 111 511 112 HOH HOH A . H 4 HOH 112 512 113 HOH HOH A . H 4 HOH 113 513 114 HOH HOH A . H 4 HOH 114 514 115 HOH HOH A . H 4 HOH 115 515 116 HOH HOH A . H 4 HOH 116 516 117 HOH HOH A . H 4 HOH 117 517 118 HOH HOH A . H 4 HOH 118 518 119 HOH HOH A . H 4 HOH 119 519 120 HOH HOH A . H 4 HOH 120 520 121 HOH HOH A . H 4 HOH 121 521 122 HOH HOH A . H 4 HOH 122 522 123 HOH HOH A . H 4 HOH 123 523 124 HOH HOH A . H 4 HOH 124 524 125 HOH HOH A . H 4 HOH 125 525 126 HOH HOH A . H 4 HOH 126 526 127 HOH HOH A . H 4 HOH 127 527 128 HOH HOH A . H 4 HOH 128 528 129 HOH HOH A . H 4 HOH 129 529 130 HOH HOH A . H 4 HOH 130 530 131 HOH HOH A . H 4 HOH 131 531 132 HOH HOH A . H 4 HOH 132 532 133 HOH HOH A . H 4 HOH 133 533 134 HOH HOH A . H 4 HOH 134 534 135 HOH HOH A . H 4 HOH 135 535 136 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900027 _pdbx_molecule_features.name thiodigalactoside _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with S-glycosidic bond between monosaccharides, and with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900027 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-31 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 3 0 2020-08-12 4 'Structure model' 3 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' 'Structure summary' 6 3 'Structure model' 'Atomic model' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' 'Structure summary' 10 4 'Structure model' 'Data collection' 11 4 'Structure model' 'Database references' 12 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' chem_comp 4 2 'Structure model' entity 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_nonpoly_scheme 13 2 'Structure model' struct_asym 14 2 'Structure model' struct_conn 15 2 'Structure model' struct_site 16 2 'Structure model' struct_site_gen 17 3 'Structure model' atom_site 18 3 'Structure model' atom_site_anisotrop 19 3 'Structure model' chem_comp 20 3 'Structure model' pdbx_branch_scheme 21 3 'Structure model' pdbx_molecule_features 22 3 'Structure model' struct_conn 23 4 'Structure model' chem_comp_atom 24 4 'Structure model' chem_comp_bond 25 4 'Structure model' database_2 26 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.occupancy' 14 2 'Structure model' '_atom_site.type_symbol' 15 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 16 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 17 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 18 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 19 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 20 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 21 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 22 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 23 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 24 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 25 2 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 26 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 27 2 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 28 2 'Structure model' '_atom_site_anisotrop.type_symbol' 29 2 'Structure model' '_chem_comp.formula' 30 2 'Structure model' '_chem_comp.formula_weight' 31 2 'Structure model' '_chem_comp.id' 32 2 'Structure model' '_chem_comp.mon_nstd_flag' 33 2 'Structure model' '_chem_comp.name' 34 2 'Structure model' '_chem_comp.type' 35 2 'Structure model' '_entity.formula_weight' 36 2 'Structure model' '_entity.pdbx_description' 37 2 'Structure model' '_entity.pdbx_number_of_molecules' 38 2 'Structure model' '_entity.src_method' 39 2 'Structure model' '_entity.type' 40 2 'Structure model' '_struct_asym.entity_id' 41 3 'Structure model' '_atom_site.B_iso_or_equiv' 42 3 'Structure model' '_atom_site.Cartn_x' 43 3 'Structure model' '_atom_site.Cartn_y' 44 3 'Structure model' '_atom_site.Cartn_z' 45 3 'Structure model' '_atom_site.auth_asym_id' 46 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 47 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 48 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 49 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 50 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 51 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 52 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 53 3 'Structure model' '_chem_comp.pdbx_synonyms' 54 3 'Structure model' '_pdbx_branch_scheme.pdb_asym_id' 55 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 56 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 57 4 'Structure model' '_database_2.pdbx_DOI' 58 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.1631 _pdbx_refine_tls.origin_y 0.6809 _pdbx_refine_tls.origin_z 6.5799 _pdbx_refine_tls.T[1][1] 0.0050 _pdbx_refine_tls.T[2][2] 0.0061 _pdbx_refine_tls.T[3][3] 0.0063 _pdbx_refine_tls.T[1][2] 0.0023 _pdbx_refine_tls.T[1][3] -0.0023 _pdbx_refine_tls.T[2][3] 0.0024 _pdbx_refine_tls.L[1][1] 0.8614 _pdbx_refine_tls.L[2][2] 1.1480 _pdbx_refine_tls.L[3][3] 1.4138 _pdbx_refine_tls.L[1][2] 0.2081 _pdbx_refine_tls.L[1][3] -0.2627 _pdbx_refine_tls.L[2][3] -0.5672 _pdbx_refine_tls.S[1][1] 0.0273 _pdbx_refine_tls.S[1][2] -0.0111 _pdbx_refine_tls.S[1][3] -0.0424 _pdbx_refine_tls.S[2][1] 0.0207 _pdbx_refine_tls.S[2][2] -0.0016 _pdbx_refine_tls.S[2][3] 0.0301 _pdbx_refine_tls.S[3][1] 0.0510 _pdbx_refine_tls.S[3][2] 0.0521 _pdbx_refine_tls.S[3][3] -0.0256 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 114 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 250 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.6.0081 ? 3 SAINT 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 129 ? ? 80.29 7.92 2 1 ASN A 164 ? ? -150.24 80.99 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 108 ? A GLY 1 2 1 Y 1 A ALA 109 ? A ALA 2 3 1 Y 1 A PRO 110 ? A PRO 3 4 1 Y 1 A ALA 111 ? A ALA 4 5 1 Y 1 A GLY 112 ? A GLY 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GAL C1 C N R 89 GAL C2 C N R 90 GAL C3 C N S 91 GAL C4 C N R 92 GAL C5 C N R 93 GAL C6 C N N 94 GAL O1 O N N 95 GAL O2 O N N 96 GAL O3 O N N 97 GAL O4 O N N 98 GAL O5 O N N 99 GAL O6 O N N 100 GAL H1 H N N 101 GAL H2 H N N 102 GAL H3 H N N 103 GAL H4 H N N 104 GAL H5 H N N 105 GAL H61 H N N 106 GAL H62 H N N 107 GAL HO1 H N N 108 GAL HO2 H N N 109 GAL HO3 H N N 110 GAL HO4 H N N 111 GAL HO6 H N N 112 GLN N N N N 113 GLN CA C N S 114 GLN C C N N 115 GLN O O N N 116 GLN CB C N N 117 GLN CG C N N 118 GLN CD C N N 119 GLN OE1 O N N 120 GLN NE2 N N N 121 GLN OXT O N N 122 GLN H H N N 123 GLN H2 H N N 124 GLN HA H N N 125 GLN HB2 H N N 126 GLN HB3 H N N 127 GLN HG2 H N N 128 GLN HG3 H N N 129 GLN HE21 H N N 130 GLN HE22 H N N 131 GLN HXT H N N 132 GLU N N N N 133 GLU CA C N S 134 GLU C C N N 135 GLU O O N N 136 GLU CB C N N 137 GLU CG C N N 138 GLU CD C N N 139 GLU OE1 O N N 140 GLU OE2 O N N 141 GLU OXT O N N 142 GLU H H N N 143 GLU H2 H N N 144 GLU HA H N N 145 GLU HB2 H N N 146 GLU HB3 H N N 147 GLU HG2 H N N 148 GLU HG3 H N N 149 GLU HE2 H N N 150 GLU HXT H N N 151 GLY N N N N 152 GLY CA C N N 153 GLY C C N N 154 GLY O O N N 155 GLY OXT O N N 156 GLY H H N N 157 GLY H2 H N N 158 GLY HA2 H N N 159 GLY HA3 H N N 160 GLY HXT H N N 161 HIS N N N N 162 HIS CA C N S 163 HIS C C N N 164 HIS O O N N 165 HIS CB C N N 166 HIS CG C Y N 167 HIS ND1 N Y N 168 HIS CD2 C Y N 169 HIS CE1 C Y N 170 HIS NE2 N Y N 171 HIS OXT O N N 172 HIS H H N N 173 HIS H2 H N N 174 HIS HA H N N 175 HIS HB2 H N N 176 HIS HB3 H N N 177 HIS HD1 H N N 178 HIS HD2 H N N 179 HIS HE1 H N N 180 HIS HE2 H N N 181 HIS HXT H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 ILE N N N N 186 ILE CA C N S 187 ILE C C N N 188 ILE O O N N 189 ILE CB C N S 190 ILE CG1 C N N 191 ILE CG2 C N N 192 ILE CD1 C N N 193 ILE OXT O N N 194 ILE H H N N 195 ILE H2 H N N 196 ILE HA H N N 197 ILE HB H N N 198 ILE HG12 H N N 199 ILE HG13 H N N 200 ILE HG21 H N N 201 ILE HG22 H N N 202 ILE HG23 H N N 203 ILE HD11 H N N 204 ILE HD12 H N N 205 ILE HD13 H N N 206 ILE HXT H N N 207 LEU N N N N 208 LEU CA C N S 209 LEU C C N N 210 LEU O O N N 211 LEU CB C N N 212 LEU CG C N N 213 LEU CD1 C N N 214 LEU CD2 C N N 215 LEU OXT O N N 216 LEU H H N N 217 LEU H2 H N N 218 LEU HA H N N 219 LEU HB2 H N N 220 LEU HB3 H N N 221 LEU HG H N N 222 LEU HD11 H N N 223 LEU HD12 H N N 224 LEU HD13 H N N 225 LEU HD21 H N N 226 LEU HD22 H N N 227 LEU HD23 H N N 228 LEU HXT H N N 229 LYS N N N N 230 LYS CA C N S 231 LYS C C N N 232 LYS O O N N 233 LYS CB C N N 234 LYS CG C N N 235 LYS CD C N N 236 LYS CE C N N 237 LYS NZ N N N 238 LYS OXT O N N 239 LYS H H N N 240 LYS H2 H N N 241 LYS HA H N N 242 LYS HB2 H N N 243 LYS HB3 H N N 244 LYS HG2 H N N 245 LYS HG3 H N N 246 LYS HD2 H N N 247 LYS HD3 H N N 248 LYS HE2 H N N 249 LYS HE3 H N N 250 LYS HZ1 H N N 251 LYS HZ2 H N N 252 LYS HZ3 H N N 253 LYS HXT H N N 254 MET N N N N 255 MET CA C N S 256 MET C C N N 257 MET O O N N 258 MET CB C N N 259 MET CG C N N 260 MET SD S N N 261 MET CE C N N 262 MET OXT O N N 263 MET H H N N 264 MET H2 H N N 265 MET HA H N N 266 MET HB2 H N N 267 MET HB3 H N N 268 MET HG2 H N N 269 MET HG3 H N N 270 MET HE1 H N N 271 MET HE2 H N N 272 MET HE3 H N N 273 MET HXT H N N 274 PHE N N N N 275 PHE CA C N S 276 PHE C C N N 277 PHE O O N N 278 PHE CB C N N 279 PHE CG C Y N 280 PHE CD1 C Y N 281 PHE CD2 C Y N 282 PHE CE1 C Y N 283 PHE CE2 C Y N 284 PHE CZ C Y N 285 PHE OXT O N N 286 PHE H H N N 287 PHE H2 H N N 288 PHE HA H N N 289 PHE HB2 H N N 290 PHE HB3 H N N 291 PHE HD1 H N N 292 PHE HD2 H N N 293 PHE HE1 H N N 294 PHE HE2 H N N 295 PHE HZ H N N 296 PHE HXT H N N 297 PRO N N N N 298 PRO CA C N S 299 PRO C C N N 300 PRO O O N N 301 PRO CB C N N 302 PRO CG C N N 303 PRO CD C N N 304 PRO OXT O N N 305 PRO H H N N 306 PRO HA H N N 307 PRO HB2 H N N 308 PRO HB3 H N N 309 PRO HG2 H N N 310 PRO HG3 H N N 311 PRO HD2 H N N 312 PRO HD3 H N N 313 PRO HXT H N N 314 SER N N N N 315 SER CA C N S 316 SER C C N N 317 SER O O N N 318 SER CB C N N 319 SER OG O N N 320 SER OXT O N N 321 SER H H N N 322 SER H2 H N N 323 SER HA H N N 324 SER HB2 H N N 325 SER HB3 H N N 326 SER HG H N N 327 SER HXT H N N 328 THR N N N N 329 THR CA C N S 330 THR C C N N 331 THR O O N N 332 THR CB C N R 333 THR OG1 O N N 334 THR CG2 C N N 335 THR OXT O N N 336 THR H H N N 337 THR H2 H N N 338 THR HA H N N 339 THR HB H N N 340 THR HG1 H N N 341 THR HG21 H N N 342 THR HG22 H N N 343 THR HG23 H N N 344 THR HXT H N N 345 TRP N N N N 346 TRP CA C N S 347 TRP C C N N 348 TRP O O N N 349 TRP CB C N N 350 TRP CG C Y N 351 TRP CD1 C Y N 352 TRP CD2 C Y N 353 TRP NE1 N Y N 354 TRP CE2 C Y N 355 TRP CE3 C Y N 356 TRP CZ2 C Y N 357 TRP CZ3 C Y N 358 TRP CH2 C Y N 359 TRP OXT O N N 360 TRP H H N N 361 TRP H2 H N N 362 TRP HA H N N 363 TRP HB2 H N N 364 TRP HB3 H N N 365 TRP HD1 H N N 366 TRP HE1 H N N 367 TRP HE3 H N N 368 TRP HZ2 H N N 369 TRP HZ3 H N N 370 TRP HH2 H N N 371 TRP HXT H N N 372 TYR N N N N 373 TYR CA C N S 374 TYR C C N N 375 TYR O O N N 376 TYR CB C N N 377 TYR CG C Y N 378 TYR CD1 C Y N 379 TYR CD2 C Y N 380 TYR CE1 C Y N 381 TYR CE2 C Y N 382 TYR CZ C Y N 383 TYR OH O N N 384 TYR OXT O N N 385 TYR H H N N 386 TYR H2 H N N 387 TYR HA H N N 388 TYR HB2 H N N 389 TYR HB3 H N N 390 TYR HD1 H N N 391 TYR HD2 H N N 392 TYR HE1 H N N 393 TYR HE2 H N N 394 TYR HH H N N 395 TYR HXT H N N 396 VAL N N N N 397 VAL CA C N S 398 VAL C C N N 399 VAL O O N N 400 VAL CB C N N 401 VAL CG1 C N N 402 VAL CG2 C N N 403 VAL OXT O N N 404 VAL H H N N 405 VAL H2 H N N 406 VAL HA H N N 407 VAL HB H N N 408 VAL HG11 H N N 409 VAL HG12 H N N 410 VAL HG13 H N N 411 VAL HG21 H N N 412 VAL HG22 H N N 413 VAL HG23 H N N 414 VAL HXT H N N 415 YIO C1 C N S 416 YIO C2 C N R 417 YIO C3 C N S 418 YIO C4 C N R 419 YIO C5 C N R 420 YIO C6 C N N 421 YIO O2 O N N 422 YIO O3 O N N 423 YIO O4 O N N 424 YIO O5 O N N 425 YIO O6 O N N 426 YIO S1 S N N 427 YIO H1 H N N 428 YIO H2 H N N 429 YIO H3 H N N 430 YIO HO2 H N N 431 YIO H4 H N N 432 YIO HO3 H N N 433 YIO H5 H N N 434 YIO HO4 H N N 435 YIO H61 H N N 436 YIO H62 H N N 437 YIO HO6 H N N 438 YIO HS1 H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GAL C1 C2 sing N N 83 GAL C1 O1 sing N N 84 GAL C1 O5 sing N N 85 GAL C1 H1 sing N N 86 GAL C2 C3 sing N N 87 GAL C2 O2 sing N N 88 GAL C2 H2 sing N N 89 GAL C3 C4 sing N N 90 GAL C3 O3 sing N N 91 GAL C3 H3 sing N N 92 GAL C4 C5 sing N N 93 GAL C4 O4 sing N N 94 GAL C4 H4 sing N N 95 GAL C5 C6 sing N N 96 GAL C5 O5 sing N N 97 GAL C5 H5 sing N N 98 GAL C6 O6 sing N N 99 GAL C6 H61 sing N N 100 GAL C6 H62 sing N N 101 GAL O1 HO1 sing N N 102 GAL O2 HO2 sing N N 103 GAL O3 HO3 sing N N 104 GAL O4 HO4 sing N N 105 GAL O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TRP N CA sing N N 330 TRP N H sing N N 331 TRP N H2 sing N N 332 TRP CA C sing N N 333 TRP CA CB sing N N 334 TRP CA HA sing N N 335 TRP C O doub N N 336 TRP C OXT sing N N 337 TRP CB CG sing N N 338 TRP CB HB2 sing N N 339 TRP CB HB3 sing N N 340 TRP CG CD1 doub Y N 341 TRP CG CD2 sing Y N 342 TRP CD1 NE1 sing Y N 343 TRP CD1 HD1 sing N N 344 TRP CD2 CE2 doub Y N 345 TRP CD2 CE3 sing Y N 346 TRP NE1 CE2 sing Y N 347 TRP NE1 HE1 sing N N 348 TRP CE2 CZ2 sing Y N 349 TRP CE3 CZ3 doub Y N 350 TRP CE3 HE3 sing N N 351 TRP CZ2 CH2 doub Y N 352 TRP CZ2 HZ2 sing N N 353 TRP CZ3 CH2 sing Y N 354 TRP CZ3 HZ3 sing N N 355 TRP CH2 HH2 sing N N 356 TRP OXT HXT sing N N 357 TYR N CA sing N N 358 TYR N H sing N N 359 TYR N H2 sing N N 360 TYR CA C sing N N 361 TYR CA CB sing N N 362 TYR CA HA sing N N 363 TYR C O doub N N 364 TYR C OXT sing N N 365 TYR CB CG sing N N 366 TYR CB HB2 sing N N 367 TYR CB HB3 sing N N 368 TYR CG CD1 doub Y N 369 TYR CG CD2 sing Y N 370 TYR CD1 CE1 sing Y N 371 TYR CD1 HD1 sing N N 372 TYR CD2 CE2 doub Y N 373 TYR CD2 HD2 sing N N 374 TYR CE1 CZ doub Y N 375 TYR CE1 HE1 sing N N 376 TYR CE2 CZ sing Y N 377 TYR CE2 HE2 sing N N 378 TYR CZ OH sing N N 379 TYR OH HH sing N N 380 TYR OXT HXT sing N N 381 VAL N CA sing N N 382 VAL N H sing N N 383 VAL N H2 sing N N 384 VAL CA C sing N N 385 VAL CA CB sing N N 386 VAL CA HA sing N N 387 VAL C O doub N N 388 VAL C OXT sing N N 389 VAL CB CG1 sing N N 390 VAL CB CG2 sing N N 391 VAL CB HB sing N N 392 VAL CG1 HG11 sing N N 393 VAL CG1 HG12 sing N N 394 VAL CG1 HG13 sing N N 395 VAL CG2 HG21 sing N N 396 VAL CG2 HG22 sing N N 397 VAL CG2 HG23 sing N N 398 VAL OXT HXT sing N N 399 YIO C1 C2 sing N N 400 YIO C1 O5 sing N N 401 YIO C1 S1 sing N N 402 YIO C2 C3 sing N N 403 YIO C2 O2 sing N N 404 YIO C3 C4 sing N N 405 YIO C3 O3 sing N N 406 YIO C4 C5 sing N N 407 YIO C4 O4 sing N N 408 YIO C5 C6 sing N N 409 YIO C5 O5 sing N N 410 YIO C6 O6 sing N N 411 YIO C1 H1 sing N N 412 YIO C2 H2 sing N N 413 YIO C3 H3 sing N N 414 YIO O2 HO2 sing N N 415 YIO C4 H4 sing N N 416 YIO O3 HO3 sing N N 417 YIO C5 H5 sing N N 418 YIO O4 HO4 sing N N 419 YIO C6 H61 sing N N 420 YIO C6 H62 sing N N 421 YIO S1 HS1 sing N N 422 YIO O6 HO6 sing N N 423 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 YIO 1 C YIO 1 H TDG 1 n B 2 GAL 2 C GAL 2 H TDG 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal YIO 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp1SH # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/1,2,1/[a2112h-1b_1-5]/1-1/a1-b1*S*' WURCS PDB2Glycan 1.1.0 2 2 '[][b-D-Galp1SH]{[(1+S)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 YIO _pdbx_entity_branch_link.atom_id_2 S1 _pdbx_entity_branch_link.leaving_atom_id_2 HS1 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 YIO 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1A3K _pdbx_initial_refinement_model.details 'pdb entry 1A3K' #