data_4JDU # _entry.id 4JDU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4JDU RCSB RCSB077921 WWPDB D_1000077921 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC105901 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JDU _pdbx_database_status.recvd_initial_deposition_date 2013-02-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fan, Y.' 1 'Tan, K.' 2 'Bigelow, L.' 3 'Bearden, J.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title ;The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines. ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fan, Y.' 1 primary 'Tan, K.' 2 primary 'Bigelow, L.' 3 primary 'Bearden, J.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 4JDU _cell.length_a 39.277 _cell.length_b 49.871 _cell.length_c 85.451 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JDU _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aerotolerance-related membrane protein' 23138.137 1 ? 'E208A, E212S, A213S, A214S, K215S, K216S' 'UNP residues 85-296' ? 2 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 136 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAVKRKGVEV(MSE)IALDISNS(MSE)LAQDVQPSRLEKA(MLY)RLISKLVDG(MSE)ENDKVG(MSE)IVFAGDAF TQLPITSDYISAK(MSE)FLESISPSLISKQGTAIGAAINLAARSFTPQEGVGRAIVVITDGENHEGGAVAAAKSSSSSG IQVNVLGVGLPDGAPIPIEGSNDFRRDREGNVIVTRLNEA(MSE)CQEIAKEGNGIYIRVDNSNSAQKAINQEINK (MSE)AKSDVE ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAVKRKGVEVMIALDISNSMLAQDVQPSRLEKAKRLISKLVDGMENDKVGMIVFAGDAFTQLPITSDYISAKMFLESIS PSLISKQGTAIGAAINLAARSFTPQEGVGRAIVVITDGENHEGGAVAAAKSSSSSGIQVNVLGVGLPDGAPIPIEGSNDF RRDREGNVIVTRLNEAMCQEIAKEGNGIYIRVDNSNSAQKAINQEINKMAKSDVE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC105901 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 VAL n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 GLY n 1 9 VAL n 1 10 GLU n 1 11 VAL n 1 12 MSE n 1 13 ILE n 1 14 ALA n 1 15 LEU n 1 16 ASP n 1 17 ILE n 1 18 SER n 1 19 ASN n 1 20 SER n 1 21 MSE n 1 22 LEU n 1 23 ALA n 1 24 GLN n 1 25 ASP n 1 26 VAL n 1 27 GLN n 1 28 PRO n 1 29 SER n 1 30 ARG n 1 31 LEU n 1 32 GLU n 1 33 LYS n 1 34 ALA n 1 35 MLY n 1 36 ARG n 1 37 LEU n 1 38 ILE n 1 39 SER n 1 40 LYS n 1 41 LEU n 1 42 VAL n 1 43 ASP n 1 44 GLY n 1 45 MSE n 1 46 GLU n 1 47 ASN n 1 48 ASP n 1 49 LYS n 1 50 VAL n 1 51 GLY n 1 52 MSE n 1 53 ILE n 1 54 VAL n 1 55 PHE n 1 56 ALA n 1 57 GLY n 1 58 ASP n 1 59 ALA n 1 60 PHE n 1 61 THR n 1 62 GLN n 1 63 LEU n 1 64 PRO n 1 65 ILE n 1 66 THR n 1 67 SER n 1 68 ASP n 1 69 TYR n 1 70 ILE n 1 71 SER n 1 72 ALA n 1 73 LYS n 1 74 MSE n 1 75 PHE n 1 76 LEU n 1 77 GLU n 1 78 SER n 1 79 ILE n 1 80 SER n 1 81 PRO n 1 82 SER n 1 83 LEU n 1 84 ILE n 1 85 SER n 1 86 LYS n 1 87 GLN n 1 88 GLY n 1 89 THR n 1 90 ALA n 1 91 ILE n 1 92 GLY n 1 93 ALA n 1 94 ALA n 1 95 ILE n 1 96 ASN n 1 97 LEU n 1 98 ALA n 1 99 ALA n 1 100 ARG n 1 101 SER n 1 102 PHE n 1 103 THR n 1 104 PRO n 1 105 GLN n 1 106 GLU n 1 107 GLY n 1 108 VAL n 1 109 GLY n 1 110 ARG n 1 111 ALA n 1 112 ILE n 1 113 VAL n 1 114 VAL n 1 115 ILE n 1 116 THR n 1 117 ASP n 1 118 GLY n 1 119 GLU n 1 120 ASN n 1 121 HIS n 1 122 GLU n 1 123 GLY n 1 124 GLY n 1 125 ALA n 1 126 VAL n 1 127 ALA n 1 128 ALA n 1 129 ALA n 1 130 LYS n 1 131 SER n 1 132 SER n 1 133 SER n 1 134 SER n 1 135 SER n 1 136 GLY n 1 137 ILE n 1 138 GLN n 1 139 VAL n 1 140 ASN n 1 141 VAL n 1 142 LEU n 1 143 GLY n 1 144 VAL n 1 145 GLY n 1 146 LEU n 1 147 PRO n 1 148 ASP n 1 149 GLY n 1 150 ALA n 1 151 PRO n 1 152 ILE n 1 153 PRO n 1 154 ILE n 1 155 GLU n 1 156 GLY n 1 157 SER n 1 158 ASN n 1 159 ASP n 1 160 PHE n 1 161 ARG n 1 162 ARG n 1 163 ASP n 1 164 ARG n 1 165 GLU n 1 166 GLY n 1 167 ASN n 1 168 VAL n 1 169 ILE n 1 170 VAL n 1 171 THR n 1 172 ARG n 1 173 LEU n 1 174 ASN n 1 175 GLU n 1 176 ALA n 1 177 MSE n 1 178 CYS n 1 179 GLN n 1 180 GLU n 1 181 ILE n 1 182 ALA n 1 183 LYS n 1 184 GLU n 1 185 GLY n 1 186 ASN n 1 187 GLY n 1 188 ILE n 1 189 TYR n 1 190 ILE n 1 191 ARG n 1 192 VAL n 1 193 ASP n 1 194 ASN n 1 195 SER n 1 196 ASN n 1 197 SER n 1 198 ALA n 1 199 GLN n 1 200 LYS n 1 201 ALA n 1 202 ILE n 1 203 ASN n 1 204 GLN n 1 205 GLU n 1 206 ILE n 1 207 ASN n 1 208 LYS n 1 209 MSE n 1 210 ALA n 1 211 LYS n 1 212 SER n 1 213 ASP n 1 214 VAL n 1 215 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'batB, BF2500, BF9343_2419' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NCTC 9343' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides fragilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272559 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5LCG5_BACFN _struct_ref.pdbx_db_accession Q5LCG5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VKRKGVEVMIALDISNSMLAQDVQPSRLEKAKRLISKLVDGMENDKVGMIVFAGDAFTQLPITSDYISAKMFLESISPSL ISKQGTAIGAAINLAARSFTPQEGVGRAIVVITDGENHEGGAVEAAKEAAKKGIQVNVLGVGLPDGAPIPIEGSNDFRRD REGNVIVTRLNEAMCQEIAKEGNGIYIRVDNSNSAQKAINQEINKMAKSDVE ; _struct_ref.pdbx_align_begin 85 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4JDU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 215 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5LCG5 _struct_ref_seq.db_align_beg 85 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 296 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 85 _struct_ref_seq.pdbx_auth_seq_align_end 296 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JDU SER A 1 ? UNP Q5LCG5 ? ? 'EXPRESSION TAG' 82 1 1 4JDU ASN A 2 ? UNP Q5LCG5 ? ? 'EXPRESSION TAG' 83 2 1 4JDU ALA A 3 ? UNP Q5LCG5 ? ? 'EXPRESSION TAG' 84 3 1 4JDU ALA A 127 ? UNP Q5LCG5 GLU 208 'engineered mutation' 208 4 1 4JDU SER A 131 ? UNP Q5LCG5 GLU 212 'engineered mutation' 212 5 1 4JDU SER A 132 ? UNP Q5LCG5 ALA 213 'engineered mutation' 213 6 1 4JDU SER A 133 ? UNP Q5LCG5 ALA 214 'engineered mutation' 214 7 1 4JDU SER A 134 ? UNP Q5LCG5 LYS 215 'engineered mutation' 215 8 1 4JDU SER A 135 ? UNP Q5LCG5 LYS 216 'engineered mutation' 216 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4JDU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_percent_sol 31.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pdbx_details ;0.1M Bis-Tris, 25% (w/v) PEG3350, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 297K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirror _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-12-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97918 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.47 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 43.1 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4JDU _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 29016 _reflns.d_resolution_low 36.0 _reflns.pdbx_redundancy 6.4 _reflns.number_obs 29016 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.47 _reflns_shell.d_res_low 1.50 _reflns_shell.percent_possible_all 91.5 _reflns_shell.Rmerge_I_obs 0.496 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1299 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.08 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4JDU _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.14 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1825 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1472 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.34 _refine.ls_percent_reflns_obs 98.89 _refine.ls_R_factor_R_work 0.1816 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.470 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 35.688 _refine.pdbx_overall_phase_error 21.72 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.1977 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 28955 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 28955 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1460 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 1600 _refine_hist.d_res_high 1.470 _refine_hist.d_res_low 35.688 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1557 ? 'X-RAY DIFFRACTION' f_angle_d 1.030 ? ? 2125 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.092 ? ? 594 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.066 ? ? 255 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 282 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.4702 1.5176 2283 0.2479 92.00 0.2860 . . 115 . . . . 'X-RAY DIFFRACTION' . 1.5176 1.5719 2463 0.2197 98.00 0.2484 . . 106 . . . . 'X-RAY DIFFRACTION' . 1.5719 1.6348 2492 0.1976 100.00 0.2156 . . 129 . . . . 'X-RAY DIFFRACTION' . 1.6348 1.7092 2517 0.1886 100.00 0.2291 . . 118 . . . . 'X-RAY DIFFRACTION' . 1.7092 1.7993 2465 0.1842 100.00 0.2354 . . 156 . . . . 'X-RAY DIFFRACTION' . 1.7993 1.9121 2493 0.1778 100.00 0.2107 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.9121 2.0597 2526 0.1812 100.00 0.1896 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.0597 2.2669 2516 0.1698 100.00 0.1863 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.2669 2.5949 2530 0.1775 100.00 0.1984 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.5949 3.2689 2563 0.1874 100.00 0.2440 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.2689 35.6981 2635 0.1743 98.00 0.1630 . . 151 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4JDU _struct.title ;The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines. ; _struct.pdbx_descriptor 'Aerotolerance-related membrane protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'structural genomics, PSI-Biology, protein structure initiative, midwest center for structural genomics, MCSG, MEMBRANE PROTEIN' _struct_keywords.entry_id 4JDU # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Experimentally unknown. The chain A is predicted to be a monomer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? ALA A 23 ? SER A 99 ALA A 104 5 ? 6 HELX_P HELX_P2 2 SER A 29 ? GLY A 44 ? SER A 110 GLY A 125 1 ? 16 HELX_P HELX_P3 3 ASP A 68 ? SER A 78 ? ASP A 149 SER A 159 1 ? 11 HELX_P HELX_P4 4 ILE A 79 ? ILE A 84 ? ILE A 160 ILE A 165 5 ? 6 HELX_P HELX_P5 5 ALA A 90 ? ARG A 100 ? ALA A 171 ARG A 181 1 ? 11 HELX_P HELX_P6 6 GLY A 124 ? SER A 135 ? GLY A 205 SER A 216 1 ? 12 HELX_P HELX_P7 7 ASN A 174 ? GLY A 185 ? ASN A 255 GLY A 266 1 ? 12 HELX_P HELX_P8 8 ASN A 194 ? ASN A 207 ? ASN A 275 ASN A 288 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A VAL 11 C ? ? ? 1_555 A MSE 12 N ? ? A VAL 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 12 C ? ? ? 1_555 A ILE 13 N A ? A MSE 93 A ILE 94 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? A MSE 12 C ? ? ? 1_555 A ILE 13 N B ? A MSE 93 A ILE 94 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A SER 20 C ? ? ? 1_555 A MSE 21 N ? ? A SER 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A MSE 21 C ? ? ? 1_555 A LEU 22 N ? ? A MSE 102 A LEU 103 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A ALA 34 C ? ? ? 1_555 A MLY 35 N ? ? A ALA 115 A MLY 116 1_555 ? ? ? ? ? ? ? 1.329 ? covale7 covale ? ? A MLY 35 C ? ? ? 1_555 A ARG 36 N ? ? A MLY 116 A ARG 117 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A GLY 44 C ? ? ? 1_555 A MSE 45 N ? ? A GLY 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.332 ? covale9 covale ? ? A MSE 45 C ? ? ? 1_555 A GLU 46 N ? ? A MSE 126 A GLU 127 1_555 ? ? ? ? ? ? ? 1.327 ? covale10 covale ? ? A GLY 51 C ? ? ? 1_555 A MSE 52 N ? ? A GLY 132 A MSE 133 1_555 ? ? ? ? ? ? ? 1.329 ? covale11 covale ? ? A MSE 52 C ? ? ? 1_555 A ILE 53 N ? ? A MSE 133 A ILE 134 1_555 ? ? ? ? ? ? ? 1.325 ? covale12 covale ? ? A LYS 73 C ? ? ? 1_555 A MSE 74 N ? ? A LYS 154 A MSE 155 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A MSE 74 C ? ? ? 1_555 A PHE 75 N ? ? A MSE 155 A PHE 156 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale ? ? A ALA 176 C ? ? ? 1_555 A MSE 177 N ? ? A ALA 257 A MSE 258 1_555 ? ? ? ? ? ? ? 1.330 ? covale15 covale ? ? A MSE 177 C ? ? ? 1_555 A CYS 178 N ? ? A MSE 258 A CYS 259 1_555 ? ? ? ? ? ? ? 1.328 ? covale16 covale ? ? A LYS 208 C ? ? ? 1_555 A MSE 209 N ? ? A LYS 289 A MSE 290 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? A SER 18 OG ? ? ? 1_555 C CA . CA A ? A SER 99 A CA 302 1_555 ? ? ? ? ? ? ? 2.292 ? metalc2 metalc ? ? A SER 20 OG ? ? ? 1_555 C CA . CA A ? A SER 101 A CA 302 1_555 ? ? ? ? ? ? ? 2.378 ? metalc3 metalc ? ? A THR 89 OG1 ? ? ? 1_555 C CA . CA A ? A THR 170 A CA 302 1_555 ? ? ? ? ? ? ? 2.390 ? metalc4 metalc ? ? C CA . CA A ? ? 1_555 D HOH . O ? ? A CA 302 A HOH 488 1_555 ? ? ? ? ? ? ? 2.466 ? metalc5 metalc ? ? A ASP 117 OD1 ? ? ? 1_555 C CA . CA B ? A ASP 198 A CA 302 1_555 ? ? ? ? ? ? ? 2.569 ? metalc6 metalc ? ? A ASP 16 OD2 ? ? ? 1_555 C CA . CA B ? A ASP 97 A CA 302 1_555 ? ? ? ? ? ? ? 2.628 ? metalc7 metalc ? ? C CA . CA A ? ? 1_555 D HOH . O ? ? A CA 302 A HOH 533 1_555 ? ? ? ? ? ? ? 2.646 ? metalc8 metalc ? ? A THR 89 OG1 ? ? ? 1_555 C CA . CA B ? A THR 170 A CA 302 1_555 ? ? ? ? ? ? ? 3.045 ? metalc9 metalc ? ? A SER 18 OG ? ? ? 1_555 C CA . CA B ? A SER 99 A CA 302 1_555 ? ? ? ? ? ? ? 3.046 ? metalc10 metalc ? ? A SER 20 OG ? ? ? 1_555 C CA . CA B ? A SER 101 A CA 302 1_555 ? ? ? ? ? ? ? 3.147 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 27 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 108 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 28 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 109 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.81 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 59 ? THR A 66 ? ALA A 140 THR A 147 A 2 LYS A 49 ? PHE A 55 ? LYS A 130 PHE A 136 A 3 VAL A 9 ? ASP A 16 ? VAL A 90 ASP A 97 A 4 GLY A 109 ? THR A 116 ? GLY A 190 THR A 197 A 5 GLN A 138 ? GLY A 143 ? GLN A 219 GLY A 224 A 6 TYR A 189 ? ARG A 191 ? TYR A 270 ARG A 272 B 1 ALA A 150 ? PRO A 151 ? ALA A 231 PRO A 232 B 2 VAL A 170 ? THR A 171 ? VAL A 251 THR A 252 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 60 ? O PHE A 141 N VAL A 54 ? N VAL A 135 A 2 3 O ILE A 53 ? O ILE A 134 N ILE A 13 ? N ILE A 94 A 3 4 N ALA A 14 ? N ALA A 95 O VAL A 113 ? O VAL A 194 A 4 5 N ILE A 112 ? N ILE A 193 O GLN A 138 ? O GLN A 219 A 5 6 N GLY A 143 ? N GLY A 224 O ILE A 190 ? O ILE A 271 B 1 2 N ALA A 150 ? N ALA A 231 O THR A 171 ? O THR A 252 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE FMT A 301' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CA A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PHE A 75 ? PHE A 156 . ? 4_455 ? 2 AC1 4 SER A 78 ? SER A 159 . ? 4_455 ? 3 AC1 4 ASP A 159 ? ASP A 240 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 506 . ? 1_555 ? 5 AC2 7 ASP A 16 ? ASP A 97 . ? 1_555 ? 6 AC2 7 SER A 18 ? SER A 99 . ? 1_555 ? 7 AC2 7 SER A 20 ? SER A 101 . ? 1_555 ? 8 AC2 7 THR A 89 ? THR A 170 . ? 1_555 ? 9 AC2 7 ASP A 117 ? ASP A 198 . ? 1_555 ? 10 AC2 7 HOH D . ? HOH A 488 . ? 1_555 ? 11 AC2 7 HOH D . ? HOH A 533 . ? 1_555 ? # _database_PDB_matrix.entry_id 4JDU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4JDU _atom_sites.fract_transf_matrix[1][1] 0.025460 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020052 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011703 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 82 ? ? ? A . n A 1 2 ASN 2 83 ? ? ? A . n A 1 3 ALA 3 84 ? ? ? A . n A 1 4 VAL 4 85 ? ? ? A . n A 1 5 LYS 5 86 ? ? ? A . n A 1 6 ARG 6 87 ? ? ? A . n A 1 7 LYS 7 88 ? ? ? A . n A 1 8 GLY 8 89 89 GLY GLY A . n A 1 9 VAL 9 90 90 VAL VAL A . n A 1 10 GLU 10 91 91 GLU GLU A . n A 1 11 VAL 11 92 92 VAL VAL A . n A 1 12 MSE 12 93 93 MSE MSE A . n A 1 13 ILE 13 94 94 ILE ILE A . n A 1 14 ALA 14 95 95 ALA ALA A . n A 1 15 LEU 15 96 96 LEU LEU A . n A 1 16 ASP 16 97 97 ASP ASP A . n A 1 17 ILE 17 98 98 ILE ILE A . n A 1 18 SER 18 99 99 SER SER A . n A 1 19 ASN 19 100 100 ASN ASN A . n A 1 20 SER 20 101 101 SER SER A . n A 1 21 MSE 21 102 102 MSE MSE A . n A 1 22 LEU 22 103 103 LEU LEU A . n A 1 23 ALA 23 104 104 ALA ALA A . n A 1 24 GLN 24 105 105 GLN GLN A . n A 1 25 ASP 25 106 106 ASP ASP A . n A 1 26 VAL 26 107 107 VAL VAL A . n A 1 27 GLN 27 108 108 GLN GLN A . n A 1 28 PRO 28 109 109 PRO PRO A . n A 1 29 SER 29 110 110 SER SER A . n A 1 30 ARG 30 111 111 ARG ARG A . n A 1 31 LEU 31 112 112 LEU LEU A . n A 1 32 GLU 32 113 113 GLU GLU A . n A 1 33 LYS 33 114 114 LYS LYS A . n A 1 34 ALA 34 115 115 ALA ALA A . n A 1 35 MLY 35 116 116 MLY MLY A . n A 1 36 ARG 36 117 117 ARG ARG A . n A 1 37 LEU 37 118 118 LEU LEU A . n A 1 38 ILE 38 119 119 ILE ILE A . n A 1 39 SER 39 120 120 SER SER A . n A 1 40 LYS 40 121 121 LYS LYS A . n A 1 41 LEU 41 122 122 LEU LEU A . n A 1 42 VAL 42 123 123 VAL VAL A . n A 1 43 ASP 43 124 124 ASP ASP A . n A 1 44 GLY 44 125 125 GLY GLY A . n A 1 45 MSE 45 126 126 MSE MSE A . n A 1 46 GLU 46 127 127 GLU GLU A . n A 1 47 ASN 47 128 128 ASN ASN A . n A 1 48 ASP 48 129 129 ASP ASP A . n A 1 49 LYS 49 130 130 LYS LYS A . n A 1 50 VAL 50 131 131 VAL VAL A . n A 1 51 GLY 51 132 132 GLY GLY A . n A 1 52 MSE 52 133 133 MSE MSE A . n A 1 53 ILE 53 134 134 ILE ILE A . n A 1 54 VAL 54 135 135 VAL VAL A . n A 1 55 PHE 55 136 136 PHE PHE A . n A 1 56 ALA 56 137 137 ALA ALA A . n A 1 57 GLY 57 138 138 GLY GLY A . n A 1 58 ASP 58 139 139 ASP ASP A . n A 1 59 ALA 59 140 140 ALA ALA A . n A 1 60 PHE 60 141 141 PHE PHE A . n A 1 61 THR 61 142 142 THR THR A . n A 1 62 GLN 62 143 143 GLN GLN A . n A 1 63 LEU 63 144 144 LEU LEU A . n A 1 64 PRO 64 145 145 PRO PRO A . n A 1 65 ILE 65 146 146 ILE ILE A . n A 1 66 THR 66 147 147 THR THR A . n A 1 67 SER 67 148 148 SER SER A . n A 1 68 ASP 68 149 149 ASP ASP A . n A 1 69 TYR 69 150 150 TYR TYR A . n A 1 70 ILE 70 151 151 ILE ILE A . n A 1 71 SER 71 152 152 SER SER A . n A 1 72 ALA 72 153 153 ALA ALA A . n A 1 73 LYS 73 154 154 LYS LYS A . n A 1 74 MSE 74 155 155 MSE MSE A . n A 1 75 PHE 75 156 156 PHE PHE A . n A 1 76 LEU 76 157 157 LEU LEU A . n A 1 77 GLU 77 158 158 GLU GLU A . n A 1 78 SER 78 159 159 SER SER A . n A 1 79 ILE 79 160 160 ILE ILE A . n A 1 80 SER 80 161 161 SER SER A . n A 1 81 PRO 81 162 162 PRO PRO A . n A 1 82 SER 82 163 163 SER SER A . n A 1 83 LEU 83 164 164 LEU LEU A . n A 1 84 ILE 84 165 165 ILE ILE A . n A 1 85 SER 85 166 ? ? ? A . n A 1 86 LYS 86 167 167 LYS LYS A . n A 1 87 GLN 87 168 168 GLN GLN A . n A 1 88 GLY 88 169 169 GLY GLY A . n A 1 89 THR 89 170 170 THR THR A . n A 1 90 ALA 90 171 171 ALA ALA A . n A 1 91 ILE 91 172 172 ILE ILE A . n A 1 92 GLY 92 173 173 GLY GLY A . n A 1 93 ALA 93 174 174 ALA ALA A . n A 1 94 ALA 94 175 175 ALA ALA A . n A 1 95 ILE 95 176 176 ILE ILE A . n A 1 96 ASN 96 177 177 ASN ASN A . n A 1 97 LEU 97 178 178 LEU LEU A . n A 1 98 ALA 98 179 179 ALA ALA A . n A 1 99 ALA 99 180 180 ALA ALA A . n A 1 100 ARG 100 181 181 ARG ARG A . n A 1 101 SER 101 182 182 SER SER A . n A 1 102 PHE 102 183 183 PHE PHE A . n A 1 103 THR 103 184 184 THR THR A . n A 1 104 PRO 104 185 185 PRO PRO A . n A 1 105 GLN 105 186 186 GLN GLN A . n A 1 106 GLU 106 187 187 GLU GLU A . n A 1 107 GLY 107 188 188 GLY GLY A . n A 1 108 VAL 108 189 189 VAL VAL A . n A 1 109 GLY 109 190 190 GLY GLY A . n A 1 110 ARG 110 191 191 ARG ARG A . n A 1 111 ALA 111 192 192 ALA ALA A . n A 1 112 ILE 112 193 193 ILE ILE A . n A 1 113 VAL 113 194 194 VAL VAL A . n A 1 114 VAL 114 195 195 VAL VAL A . n A 1 115 ILE 115 196 196 ILE ILE A . n A 1 116 THR 116 197 197 THR THR A . n A 1 117 ASP 117 198 198 ASP ASP A . n A 1 118 GLY 118 199 199 GLY GLY A . n A 1 119 GLU 119 200 200 GLU GLU A . n A 1 120 ASN 120 201 201 ASN ASN A . n A 1 121 HIS 121 202 202 HIS HIS A . n A 1 122 GLU 122 203 203 GLU GLU A . n A 1 123 GLY 123 204 204 GLY GLY A . n A 1 124 GLY 124 205 205 GLY GLY A . n A 1 125 ALA 125 206 206 ALA ALA A . n A 1 126 VAL 126 207 207 VAL VAL A . n A 1 127 ALA 127 208 208 ALA ALA A . n A 1 128 ALA 128 209 209 ALA ALA A . n A 1 129 ALA 129 210 210 ALA ALA A . n A 1 130 LYS 130 211 211 LYS LYS A . n A 1 131 SER 131 212 212 SER SER A . n A 1 132 SER 132 213 213 SER SER A . n A 1 133 SER 133 214 214 SER SER A . n A 1 134 SER 134 215 215 SER SER A . n A 1 135 SER 135 216 216 SER SER A . n A 1 136 GLY 136 217 217 GLY GLY A . n A 1 137 ILE 137 218 218 ILE ILE A . n A 1 138 GLN 138 219 219 GLN GLN A . n A 1 139 VAL 139 220 220 VAL VAL A . n A 1 140 ASN 140 221 221 ASN ASN A . n A 1 141 VAL 141 222 222 VAL VAL A . n A 1 142 LEU 142 223 223 LEU LEU A . n A 1 143 GLY 143 224 224 GLY GLY A . n A 1 144 VAL 144 225 225 VAL VAL A . n A 1 145 GLY 145 226 226 GLY GLY A . n A 1 146 LEU 146 227 227 LEU LEU A . n A 1 147 PRO 147 228 228 PRO PRO A . n A 1 148 ASP 148 229 229 ASP ASP A . n A 1 149 GLY 149 230 230 GLY GLY A . n A 1 150 ALA 150 231 231 ALA ALA A . n A 1 151 PRO 151 232 232 PRO PRO A . n A 1 152 ILE 152 233 233 ILE ILE A . n A 1 153 PRO 153 234 234 PRO PRO A . n A 1 154 ILE 154 235 235 ILE ILE A . n A 1 155 GLU 155 236 236 GLU GLU A . n A 1 156 GLY 156 237 237 GLY GLY A . n A 1 157 SER 157 238 238 SER SER A . n A 1 158 ASN 158 239 239 ASN ASN A . n A 1 159 ASP 159 240 240 ASP ASP A . n A 1 160 PHE 160 241 241 PHE PHE A . n A 1 161 ARG 161 242 242 ARG ARG A . n A 1 162 ARG 162 243 243 ARG ARG A . n A 1 163 ASP 163 244 244 ASP ASP A . n A 1 164 ARG 164 245 245 ARG ARG A . n A 1 165 GLU 165 246 246 GLU GLU A . n A 1 166 GLY 166 247 247 GLY GLY A . n A 1 167 ASN 167 248 248 ASN ASN A . n A 1 168 VAL 168 249 249 VAL VAL A . n A 1 169 ILE 169 250 250 ILE ILE A . n A 1 170 VAL 170 251 251 VAL VAL A . n A 1 171 THR 171 252 252 THR THR A . n A 1 172 ARG 172 253 253 ARG ARG A . n A 1 173 LEU 173 254 254 LEU LEU A . n A 1 174 ASN 174 255 255 ASN ASN A . n A 1 175 GLU 175 256 256 GLU GLU A . n A 1 176 ALA 176 257 257 ALA ALA A . n A 1 177 MSE 177 258 258 MSE MSE A . n A 1 178 CYS 178 259 259 CYS CYS A . n A 1 179 GLN 179 260 260 GLN GLN A . n A 1 180 GLU 180 261 261 GLU GLU A . n A 1 181 ILE 181 262 262 ILE ILE A . n A 1 182 ALA 182 263 263 ALA ALA A . n A 1 183 LYS 183 264 264 LYS LYS A . n A 1 184 GLU 184 265 265 GLU GLU A . n A 1 185 GLY 185 266 266 GLY GLY A . n A 1 186 ASN 186 267 267 ASN ASN A . n A 1 187 GLY 187 268 268 GLY GLY A . n A 1 188 ILE 188 269 269 ILE ILE A . n A 1 189 TYR 189 270 270 TYR TYR A . n A 1 190 ILE 190 271 271 ILE ILE A . n A 1 191 ARG 191 272 272 ARG ARG A . n A 1 192 VAL 192 273 273 VAL VAL A . n A 1 193 ASP 193 274 274 ASP ASP A . n A 1 194 ASN 194 275 275 ASN ASN A . n A 1 195 SER 195 276 276 SER SER A . n A 1 196 ASN 196 277 277 ASN ASN A . n A 1 197 SER 197 278 278 SER SER A . n A 1 198 ALA 198 279 279 ALA ALA A . n A 1 199 GLN 199 280 280 GLN GLN A . n A 1 200 LYS 200 281 281 LYS LYS A . n A 1 201 ALA 201 282 282 ALA ALA A . n A 1 202 ILE 202 283 283 ILE ILE A . n A 1 203 ASN 203 284 284 ASN ASN A . n A 1 204 GLN 204 285 285 GLN GLN A . n A 1 205 GLU 205 286 286 GLU GLU A . n A 1 206 ILE 206 287 287 ILE ILE A . n A 1 207 ASN 207 288 288 ASN ASN A . n A 1 208 LYS 208 289 289 LYS LYS A . n A 1 209 MSE 209 290 290 MSE MSE A . n A 1 210 ALA 210 291 ? ? ? A . n A 1 211 LYS 211 292 ? ? ? A . n A 1 212 SER 212 293 ? ? ? A . n A 1 213 ASP 213 294 ? ? ? A . n A 1 214 VAL 214 295 ? ? ? A . n A 1 215 GLU 215 296 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG _pdbx_SG_project.id 1 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 93 ? MET SELENOMETHIONINE 2 A MSE 21 A MSE 102 ? MET SELENOMETHIONINE 3 A MLY 35 A MLY 116 ? LYS N-DIMETHYL-LYSINE 4 A MSE 45 A MSE 126 ? MET SELENOMETHIONINE 5 A MSE 52 A MSE 133 ? MET SELENOMETHIONINE 6 A MSE 74 A MSE 155 ? MET SELENOMETHIONINE 7 A MSE 177 A MSE 258 ? MET SELENOMETHIONINE 8 A MSE 209 A MSE 290 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 18 ? A SER 99 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 OG ? A SER 20 ? A SER 101 ? 1_555 95.3 ? 2 OG ? A SER 18 ? A SER 99 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 OG1 ? A THR 89 ? A THR 170 ? 1_555 88.5 ? 3 OG ? A SER 20 ? A SER 101 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 OG1 ? A THR 89 ? A THR 170 ? 1_555 176.2 ? 4 OG ? A SER 18 ? A SER 99 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 488 ? 1_555 158.7 ? 5 OG ? A SER 20 ? A SER 101 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 488 ? 1_555 81.0 ? 6 OG1 ? A THR 89 ? A THR 170 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 488 ? 1_555 95.6 ? 7 OG ? A SER 18 ? A SER 99 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 533 ? 1_555 83.7 ? 8 OG ? A SER 20 ? A SER 101 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 533 ? 1_555 83.0 ? 9 OG1 ? A THR 89 ? A THR 170 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 533 ? 1_555 97.7 ? 10 O ? D HOH . ? A HOH 488 ? 1_555 CA A C CA . ? A CA 302 ? 1_555 O ? D HOH . ? A HOH 533 ? 1_555 75.0 ? 11 OD1 ? A ASP 117 ? A ASP 198 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OD2 ? A ASP 16 ? A ASP 97 ? 1_555 96.3 ? 12 OD1 ? A ASP 117 ? A ASP 198 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG1 ? A THR 89 ? A THR 170 ? 1_555 154.1 ? 13 OD2 ? A ASP 16 ? A ASP 97 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG1 ? A THR 89 ? A THR 170 ? 1_555 105.8 ? 14 OD1 ? A ASP 117 ? A ASP 198 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 18 ? A SER 99 ? 1_555 133.0 ? 15 OD2 ? A ASP 16 ? A ASP 97 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 18 ? A SER 99 ? 1_555 81.6 ? 16 OG1 ? A THR 89 ? A THR 170 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 18 ? A SER 99 ? 1_555 64.9 ? 17 OD1 ? A ASP 117 ? A ASP 198 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 20 ? A SER 101 ? 1_555 76.3 ? 18 OD2 ? A ASP 16 ? A ASP 97 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 20 ? A SER 101 ? 1_555 125.3 ? 19 OG1 ? A THR 89 ? A THR 170 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 20 ? A SER 101 ? 1_555 100.6 ? 20 OG ? A SER 18 ? A SER 99 ? 1_555 CA B C CA . ? A CA 302 ? 1_555 OG ? A SER 20 ? A SER 101 ? 1_555 67.7 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 21.6847 8.1918 12.1467 0.1470 0.1668 0.0950 -0.0070 0.0239 0.0044 3.7906 2.5595 1.1509 0.8731 0.5917 0.3111 0.1521 -0.4912 0.1134 0.2449 -0.0834 0.0225 -0.0243 0.0109 -0.0556 'X-RAY DIFFRACTION' 2 ? refined 19.3202 8.4461 -1.7648 0.3639 0.3113 0.2473 -0.0570 -0.0030 -0.0051 1.0499 1.5895 1.4704 0.8457 -1.1701 -1.2025 -0.2594 0.7400 -0.1997 -0.9326 0.0311 0.0428 0.1221 -0.1540 -0.2245 'X-RAY DIFFRACTION' 3 ? refined 31.9862 -0.5985 7.1193 0.1230 0.1281 0.1540 0.0048 0.0307 0.0258 3.5923 3.0087 1.7746 -1.1067 -1.1681 -0.9719 -0.0175 -0.0015 -0.1966 -0.1593 -0.0904 -0.3429 0.0788 0.0536 0.0953 'X-RAY DIFFRACTION' 4 ? refined 16.0345 -4.7940 5.1838 0.1799 0.1493 0.1567 0.0033 0.0128 0.0089 3.9607 1.8429 0.9058 -1.4090 1.7149 -1.0647 0.1889 -0.1340 -0.4224 -0.1591 0.0040 0.1300 0.1295 -0.0420 -0.1881 'X-RAY DIFFRACTION' 5 ? refined 25.0789 -1.3382 22.7374 0.5185 0.5818 0.3619 -0.1020 -0.0250 0.0844 6.8423 3.2232 2.3697 -1.6275 -3.9189 1.2994 -0.1901 -1.2184 -0.0413 0.6409 -0.0284 -0.1425 -0.4314 0.5644 0.1968 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 89 through 159 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 160 through 171 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 172 through 215 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 216 through 275 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 276 through 290 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 ARP 'model building' . ? 5 WARP 'model building' . ? 6 HKL-3000 phasing . ? 7 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 127 ? ? -128.84 -54.03 2 1 ALA A 137 ? ? -139.51 -104.44 3 1 GLU A 200 ? ? -67.74 64.08 4 1 ASP A 274 ? ? -127.65 -72.12 5 1 ASN A 288 ? ? -75.16 24.82 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 127 ? CD ? A GLU 46 CD 2 1 Y 1 A GLU 127 ? OE1 ? A GLU 46 OE1 3 1 Y 1 A GLU 127 ? OE2 ? A GLU 46 OE2 4 1 Y 1 A ASP 139 ? OD1 ? A ASP 58 OD1 5 1 Y 1 A ASP 139 ? OD2 ? A ASP 58 OD2 6 1 Y 1 A LYS 167 ? CE ? A LYS 86 CE 7 1 Y 1 A LYS 167 ? NZ ? A LYS 86 NZ 8 1 Y 1 A GLN 168 ? CD ? A GLN 87 CD 9 1 Y 1 A GLN 168 ? OE1 ? A GLN 87 OE1 10 1 Y 1 A GLN 168 ? NE2 ? A GLN 87 NE2 11 1 Y 1 A GLU 187 ? CG ? A GLU 106 CG 12 1 Y 1 A GLU 187 ? CD ? A GLU 106 CD 13 1 Y 1 A GLU 187 ? OE1 ? A GLU 106 OE1 14 1 Y 1 A GLU 187 ? OE2 ? A GLU 106 OE2 15 1 Y 1 A GLU 203 ? CD ? A GLU 122 CD 16 1 Y 1 A GLU 203 ? OE1 ? A GLU 122 OE1 17 1 Y 1 A GLU 203 ? OE2 ? A GLU 122 OE2 18 1 Y 1 A ARG 245 ? CD ? A ARG 164 CD 19 1 Y 1 A ARG 245 ? NE ? A ARG 164 NE 20 1 Y 1 A ARG 245 ? CZ ? A ARG 164 CZ 21 1 Y 1 A ARG 245 ? NH1 ? A ARG 164 NH1 22 1 Y 1 A ARG 245 ? NH2 ? A ARG 164 NH2 23 1 Y 1 A LYS 281 ? CG ? A LYS 200 CG 24 1 Y 1 A LYS 281 ? CD ? A LYS 200 CD 25 1 Y 1 A LYS 281 ? CE ? A LYS 200 CE 26 1 Y 1 A LYS 281 ? NZ ? A LYS 200 NZ 27 1 Y 1 A LYS 289 ? CE ? A LYS 208 CE 28 1 Y 1 A LYS 289 ? NZ ? A LYS 208 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 82 ? A SER 1 2 1 Y 1 A ASN 83 ? A ASN 2 3 1 Y 1 A ALA 84 ? A ALA 3 4 1 Y 1 A VAL 85 ? A VAL 4 5 1 Y 1 A LYS 86 ? A LYS 5 6 1 Y 1 A ARG 87 ? A ARG 6 7 1 Y 1 A LYS 88 ? A LYS 7 8 1 Y 1 A SER 166 ? A SER 85 9 1 Y 1 A ALA 291 ? A ALA 210 10 1 Y 1 A LYS 292 ? A LYS 211 11 1 Y 1 A SER 293 ? A SER 212 12 1 Y 1 A ASP 294 ? A ASP 213 13 1 Y 1 A VAL 295 ? A VAL 214 14 1 Y 1 A GLU 296 ? A GLU 215 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 'CALCIUM ION' CA 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 301 1 FMT FMT A . C 3 CA 1 302 1 CA CA A . D 4 HOH 1 401 1 HOH HOH A . D 4 HOH 2 402 2 HOH HOH A . D 4 HOH 3 403 3 HOH HOH A . D 4 HOH 4 404 4 HOH HOH A . D 4 HOH 5 405 5 HOH HOH A . D 4 HOH 6 406 6 HOH HOH A . D 4 HOH 7 407 7 HOH HOH A . D 4 HOH 8 408 8 HOH HOH A . D 4 HOH 9 409 9 HOH HOH A . D 4 HOH 10 410 10 HOH HOH A . D 4 HOH 11 411 11 HOH HOH A . D 4 HOH 12 412 12 HOH HOH A . D 4 HOH 13 413 13 HOH HOH A . D 4 HOH 14 414 14 HOH HOH A . D 4 HOH 15 415 15 HOH HOH A . D 4 HOH 16 416 16 HOH HOH A . D 4 HOH 17 417 17 HOH HOH A . D 4 HOH 18 418 18 HOH HOH A . D 4 HOH 19 419 19 HOH HOH A . D 4 HOH 20 420 20 HOH HOH A . D 4 HOH 21 421 21 HOH HOH A . D 4 HOH 22 422 22 HOH HOH A . D 4 HOH 23 423 23 HOH HOH A . D 4 HOH 24 424 24 HOH HOH A . D 4 HOH 25 425 25 HOH HOH A . D 4 HOH 26 426 26 HOH HOH A . D 4 HOH 27 427 27 HOH HOH A . D 4 HOH 28 428 28 HOH HOH A . D 4 HOH 29 429 29 HOH HOH A . D 4 HOH 30 430 30 HOH HOH A . D 4 HOH 31 431 31 HOH HOH A . D 4 HOH 32 432 32 HOH HOH A . D 4 HOH 33 433 33 HOH HOH A . D 4 HOH 34 434 34 HOH HOH A . D 4 HOH 35 435 35 HOH HOH A . D 4 HOH 36 436 36 HOH HOH A . D 4 HOH 37 437 37 HOH HOH A . D 4 HOH 38 438 38 HOH HOH A . D 4 HOH 39 439 39 HOH HOH A . D 4 HOH 40 440 40 HOH HOH A . D 4 HOH 41 441 41 HOH HOH A . D 4 HOH 42 442 42 HOH HOH A . D 4 HOH 43 443 43 HOH HOH A . D 4 HOH 44 444 44 HOH HOH A . D 4 HOH 45 445 45 HOH HOH A . D 4 HOH 46 446 46 HOH HOH A . D 4 HOH 47 447 47 HOH HOH A . D 4 HOH 48 448 48 HOH HOH A . D 4 HOH 49 449 49 HOH HOH A . D 4 HOH 50 450 50 HOH HOH A . D 4 HOH 51 451 51 HOH HOH A . D 4 HOH 52 452 52 HOH HOH A . D 4 HOH 53 453 53 HOH HOH A . D 4 HOH 54 454 54 HOH HOH A . D 4 HOH 55 455 55 HOH HOH A . D 4 HOH 56 456 56 HOH HOH A . D 4 HOH 57 457 57 HOH HOH A . D 4 HOH 58 458 58 HOH HOH A . D 4 HOH 59 459 59 HOH HOH A . D 4 HOH 60 460 60 HOH HOH A . D 4 HOH 61 461 61 HOH HOH A . D 4 HOH 62 462 62 HOH HOH A . D 4 HOH 63 463 63 HOH HOH A . D 4 HOH 64 464 64 HOH HOH A . D 4 HOH 65 465 65 HOH HOH A . D 4 HOH 66 466 66 HOH HOH A . D 4 HOH 67 467 67 HOH HOH A . D 4 HOH 68 468 68 HOH HOH A . D 4 HOH 69 469 69 HOH HOH A . D 4 HOH 70 470 70 HOH HOH A . D 4 HOH 71 471 71 HOH HOH A . D 4 HOH 72 472 72 HOH HOH A . D 4 HOH 73 473 73 HOH HOH A . D 4 HOH 74 474 74 HOH HOH A . D 4 HOH 75 475 75 HOH HOH A . D 4 HOH 76 476 76 HOH HOH A . D 4 HOH 77 477 77 HOH HOH A . D 4 HOH 78 478 78 HOH HOH A . D 4 HOH 79 479 79 HOH HOH A . D 4 HOH 80 480 80 HOH HOH A . D 4 HOH 81 481 81 HOH HOH A . D 4 HOH 82 482 82 HOH HOH A . D 4 HOH 83 483 83 HOH HOH A . D 4 HOH 84 484 84 HOH HOH A . D 4 HOH 85 485 85 HOH HOH A . D 4 HOH 86 486 86 HOH HOH A . D 4 HOH 87 487 87 HOH HOH A . D 4 HOH 88 488 88 HOH HOH A . D 4 HOH 89 489 89 HOH HOH A . D 4 HOH 90 490 90 HOH HOH A . D 4 HOH 91 491 91 HOH HOH A . D 4 HOH 92 492 92 HOH HOH A . D 4 HOH 93 493 93 HOH HOH A . D 4 HOH 94 494 94 HOH HOH A . D 4 HOH 95 495 95 HOH HOH A . D 4 HOH 96 496 96 HOH HOH A . D 4 HOH 97 497 97 HOH HOH A . D 4 HOH 98 498 98 HOH HOH A . D 4 HOH 99 499 99 HOH HOH A . D 4 HOH 100 500 100 HOH HOH A . D 4 HOH 101 501 101 HOH HOH A . D 4 HOH 102 502 102 HOH HOH A . D 4 HOH 103 503 103 HOH HOH A . D 4 HOH 104 504 104 HOH HOH A . D 4 HOH 105 505 105 HOH HOH A . D 4 HOH 106 506 106 HOH HOH A . D 4 HOH 107 507 107 HOH HOH A . D 4 HOH 108 508 108 HOH HOH A . D 4 HOH 109 509 109 HOH HOH A . D 4 HOH 110 510 110 HOH HOH A . D 4 HOH 111 511 111 HOH HOH A . D 4 HOH 112 512 112 HOH HOH A . D 4 HOH 113 513 113 HOH HOH A . D 4 HOH 114 514 114 HOH HOH A . D 4 HOH 115 515 115 HOH HOH A . D 4 HOH 116 516 116 HOH HOH A . D 4 HOH 117 517 117 HOH HOH A . D 4 HOH 118 518 118 HOH HOH A . D 4 HOH 119 519 119 HOH HOH A . D 4 HOH 120 520 120 HOH HOH A . D 4 HOH 121 521 121 HOH HOH A . D 4 HOH 122 522 122 HOH HOH A . D 4 HOH 123 523 123 HOH HOH A . D 4 HOH 124 524 124 HOH HOH A . D 4 HOH 125 525 125 HOH HOH A . D 4 HOH 126 526 126 HOH HOH A . D 4 HOH 127 527 127 HOH HOH A . D 4 HOH 128 528 128 HOH HOH A . D 4 HOH 129 529 129 HOH HOH A . D 4 HOH 130 530 130 HOH HOH A . D 4 HOH 131 531 131 HOH HOH A . D 4 HOH 132 532 132 HOH HOH A . D 4 HOH 133 533 133 HOH HOH A . D 4 HOH 134 534 134 HOH HOH A . D 4 HOH 135 535 135 HOH HOH A . D 4 HOH 136 536 136 HOH HOH A . #