data_4JEG # _entry.id 4JEG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4JEG RCSB RCSB077942 WWPDB D_1000077942 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4JE4 _pdbx_database_related.details 'Crystal Structure of Monobody NSa1/SHP2 N-SH2 Domain Complex' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4JEG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-26 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sha, F.' 1 'Koide, S.' 2 # _citation.id primary _citation.title 'Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 14924 _citation.page_last 14929 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23980151 _citation.pdbx_database_id_DOI 10.1073/pnas.1303640110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sha, F.' 1 primary 'Gencer, E.B.' 2 primary 'Georgeon, S.' 3 primary 'Koide, A.' 4 primary 'Yasui, N.' 5 primary 'Koide, S.' 6 primary 'Hantschel, O.' 7 # _cell.length_a 111.700 _cell.length_b 111.700 _cell.length_c 31.780 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4JEG _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61' _symmetry.entry_id 4JEG _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 169 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein phosphatase non-receptor type 11' 14006.806 1 ? ? 'C-terminal SH2 domain' ? 2 polymer man 'Monobody CS1' 10470.542 1 ? ? ? ? 3 water nat water 18.015 80 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein-tyrosine phosphatase 1D, PTP-1D, Protein-tyrosine phosphatase 2C, PTP-2C, SH-PTP2, SHP-2, Shp2, SH-PTP3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQE LKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNKEK ; ;ELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQE LKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNKEK ; A ? 2 'polypeptide(L)' no no ;VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYVITYGETGYWPYYWQEFEVPGSKSTATISGLKPGVDYTITVYAGSYDS YYYYGSPISINYRT ; ;VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYVITYGETGYWPYYWQEFEVPGSKSTATISGLKPGVDYTITVYAGSYDS YYYYGSPISINYRT ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 LEU n 1 3 LYS n 1 4 TYR n 1 5 PRO n 1 6 LEU n 1 7 ASN n 1 8 CYS n 1 9 ALA n 1 10 ASP n 1 11 PRO n 1 12 THR n 1 13 SER n 1 14 GLU n 1 15 ARG n 1 16 TRP n 1 17 PHE n 1 18 HIS n 1 19 GLY n 1 20 HIS n 1 21 LEU n 1 22 SER n 1 23 GLY n 1 24 LYS n 1 25 GLU n 1 26 ALA n 1 27 GLU n 1 28 LYS n 1 29 LEU n 1 30 LEU n 1 31 THR n 1 32 GLU n 1 33 LYS n 1 34 GLY n 1 35 LYS n 1 36 HIS n 1 37 GLY n 1 38 SER n 1 39 PHE n 1 40 LEU n 1 41 VAL n 1 42 ARG n 1 43 GLU n 1 44 SER n 1 45 GLN n 1 46 SER n 1 47 HIS n 1 48 PRO n 1 49 GLY n 1 50 ASP n 1 51 PHE n 1 52 VAL n 1 53 LEU n 1 54 SER n 1 55 VAL n 1 56 ARG n 1 57 THR n 1 58 GLY n 1 59 ASP n 1 60 ASP n 1 61 LYS n 1 62 GLY n 1 63 GLU n 1 64 SER n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 LYS n 1 69 SER n 1 70 LYS n 1 71 VAL n 1 72 THR n 1 73 HIS n 1 74 VAL n 1 75 MET n 1 76 ILE n 1 77 ARG n 1 78 CYS n 1 79 GLN n 1 80 GLU n 1 81 LEU n 1 82 LYS n 1 83 TYR n 1 84 ASP n 1 85 VAL n 1 86 GLY n 1 87 GLY n 1 88 GLY n 1 89 GLU n 1 90 ARG n 1 91 PHE n 1 92 ASP n 1 93 SER n 1 94 LEU n 1 95 THR n 1 96 ASP n 1 97 LEU n 1 98 VAL n 1 99 GLU n 1 100 HIS n 1 101 TYR n 1 102 LYS n 1 103 LYS n 1 104 ASN n 1 105 PRO n 1 106 MET n 1 107 VAL n 1 108 GLU n 1 109 THR n 1 110 LEU n 1 111 GLY n 1 112 THR n 1 113 VAL n 1 114 LEU n 1 115 GLN n 1 116 LEU n 1 117 LYS n 1 118 GLN n 1 119 PRO n 1 120 LEU n 1 121 ASN n 1 122 LYS n 1 123 GLU n 1 124 LYS n 2 1 VAL n 2 2 SER n 2 3 SER n 2 4 VAL n 2 5 PRO n 2 6 THR n 2 7 LYS n 2 8 LEU n 2 9 GLU n 2 10 VAL n 2 11 VAL n 2 12 ALA n 2 13 ALA n 2 14 THR n 2 15 PRO n 2 16 THR n 2 17 SER n 2 18 LEU n 2 19 LEU n 2 20 ILE n 2 21 SER n 2 22 TRP n 2 23 ASP n 2 24 ALA n 2 25 PRO n 2 26 ALA n 2 27 VAL n 2 28 THR n 2 29 VAL n 2 30 ASP n 2 31 TYR n 2 32 TYR n 2 33 VAL n 2 34 ILE n 2 35 THR n 2 36 TYR n 2 37 GLY n 2 38 GLU n 2 39 THR n 2 40 GLY n 2 41 TYR n 2 42 TRP n 2 43 PRO n 2 44 TYR n 2 45 TYR n 2 46 TRP n 2 47 GLN n 2 48 GLU n 2 49 PHE n 2 50 GLU n 2 51 VAL n 2 52 PRO n 2 53 GLY n 2 54 SER n 2 55 LYS n 2 56 SER n 2 57 THR n 2 58 ALA n 2 59 THR n 2 60 ILE n 2 61 SER n 2 62 GLY n 2 63 LEU n 2 64 LYS n 2 65 PRO n 2 66 GLY n 2 67 VAL n 2 68 ASP n 2 69 TYR n 2 70 THR n 2 71 ILE n 2 72 THR n 2 73 VAL n 2 74 TYR n 2 75 ALA n 2 76 GLY n 2 77 SER n 2 78 TYR n 2 79 ASP n 2 80 SER n 2 81 TYR n 2 82 TYR n 2 83 TYR n 2 84 TYR n 2 85 GLY n 2 86 SER n 2 87 PRO n 2 88 ILE n 2 89 SER n 2 90 ILE n 2 91 ASN n 2 92 TYR n 2 93 ARG n 2 94 THR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'PTP2C, PTPN11, SHPTP2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pHBT ? ? 2 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pHFT2 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PTN11_HUMAN Q06124 1 ;ELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQE LKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLN ; 97 ? 2 PDB 4JEG 4JEG 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JEG A 1 ? 121 ? Q06124 97 ? 217 ? 97 217 2 2 4JEG B 1 ? 94 ? 4JEG 1 ? 94 ? 1 94 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JEG LYS A 122 ? UNP Q06124 ? ? 'EXPRESSION TAG' 218 1 1 4JEG GLU A 123 ? UNP Q06124 ? ? 'EXPRESSION TAG' 219 2 1 4JEG LYS A 124 ? UNP Q06124 ? ? 'EXPRESSION TAG' 220 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4JEG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '25% PEG 3350, 0.1M Bis-tris, 0.2M Sodium Chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-06-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(220)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979180 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_wavelength_list 0.979180 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E # _reflns.entry_id 4JEG _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 3.0 _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 19.35 _reflns.number_all 10400 _reflns.number_obs 10358 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.423 _reflns_shell.meanI_over_sigI_obs 4.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.number_unique_all 1503 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4JEG _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 19.3470 _refine.pdbx_ls_sigma_F 1.440 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.7800 _refine.ls_number_reflns_obs 10352 _refine.ls_number_reflns_all 10375 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1888 _refine.ls_R_factor_R_work 0.1868 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2268 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8100 _refine.ls_number_reflns_R_free 498 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 34.5368 _refine.solvent_model_param_bsol 40.7220 _refine.solvent_model_param_ksol 0.4040 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.2239 _refine.aniso_B[2][2] -0.2239 _refine.aniso_B[3][3] 0.4479 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 0.9000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.6000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8461 _refine.B_iso_max 103.270 _refine.B_iso_min 10.390 _refine.pdbx_overall_phase_error 22.1100 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1638 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 80 _refine_hist.number_atoms_total 1718 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 19.3470 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1682 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2284 0.885 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 249 0.062 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 287 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 605 14.989 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.3 2.5299 4 99.0000 2420 . 0.2370 0.3141 . 115 . 2535 . . 'X-RAY DIFFRACTION' 2.5299 2.8949 4 100.0000 2441 . 0.2158 0.3047 . 132 . 2573 . . 'X-RAY DIFFRACTION' 2.8949 3.6433 4 100.0000 2442 . 0.1772 0.2068 . 130 . 2572 . . 'X-RAY DIFFRACTION' 3.6433 19.3477 4 100.0000 2551 . 0.1683 0.1863 . 121 . 2672 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4JEG _struct.title 'Crystal Structure of Monobody CS1/SHP2 C-SH2 Domain Complex' _struct.pdbx_descriptor 'Tyrosine-protein phosphatase non-receptor type 11, Monobody CS1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JEG _struct_keywords.text ;engineered binding protein, SHP2 SH2-monobody complex, Phosphatase, Phosphotyrosine Binding, Phosphorylation, Signaling protein-protein binding complex ; _struct_keywords.pdbx_keywords 'Signaling protein/protein binding' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 22 ? LYS A 33 ? SER A 118 LYS A 129 1 ? 12 HELX_P HELX_P2 2 SER A 93 ? ASN A 104 ? SER A 189 ASN A 200 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 8 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 78 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 104 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 174 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 4 B . ? VAL 4 B PRO 5 B ? PRO 5 B 1 2.58 2 TRP 42 B . ? TRP 42 B PRO 43 B ? PRO 43 B 1 3.69 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 7 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 39 ? GLU A 43 ? PHE A 135 GLU A 139 A 2 PHE A 51 ? GLY A 58 ? PHE A 147 GLY A 154 A 3 LYS A 70 ? GLN A 79 ? LYS A 166 GLN A 175 A 4 LYS A 82 ? ASP A 84 ? LYS A 178 ASP A 180 B 1 PHE A 39 ? GLU A 43 ? PHE A 135 GLU A 139 B 2 PHE A 51 ? GLY A 58 ? PHE A 147 GLY A 154 B 3 LYS A 70 ? GLN A 79 ? LYS A 166 GLN A 175 B 4 TYR B 45 ? PRO B 52 ? TYR B 45 PRO B 52 B 5 TYR B 31 ? GLU B 38 ? TYR B 31 GLU B 38 B 6 ASP B 68 ? GLY B 76 ? ASP B 68 GLY B 76 B 7 ILE B 88 ? ARG B 93 ? ILE B 88 ARG B 93 C 1 VAL A 107 ? THR A 109 ? VAL A 203 THR A 205 C 2 THR A 112 ? LEU A 114 ? THR A 208 LEU A 210 D 1 GLU B 9 ? THR B 14 ? GLU B 9 THR B 14 D 2 SER B 17 ? SER B 21 ? SER B 17 SER B 21 D 3 THR B 57 ? SER B 61 ? THR B 57 SER B 61 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 40 ? N LEU A 136 O SER A 54 ? O SER A 150 A 2 3 N VAL A 55 ? N VAL A 151 O THR A 72 ? O THR A 168 A 3 4 N ARG A 77 ? N ARG A 173 O ASP A 84 ? O ASP A 180 B 1 2 N LEU A 40 ? N LEU A 136 O SER A 54 ? O SER A 150 B 2 3 N VAL A 55 ? N VAL A 151 O THR A 72 ? O THR A 168 B 3 4 N HIS A 73 ? N HIS A 169 O TRP B 46 ? O TRP B 46 B 4 5 O VAL B 51 ? O VAL B 51 N TYR B 32 ? N TYR B 32 B 5 6 N VAL B 33 ? N VAL B 33 O TYR B 74 ? O TYR B 74 B 6 7 N ILE B 71 ? N ILE B 71 O ILE B 90 ? O ILE B 90 C 1 2 N VAL A 107 ? N VAL A 203 O LEU A 114 ? O LEU A 210 D 1 2 N VAL B 11 ? N VAL B 11 O LEU B 19 ? O LEU B 19 D 2 3 N LEU B 18 ? N LEU B 18 O ILE B 60 ? O ILE B 60 # _atom_sites.entry_id 4JEG _atom_sites.fract_transf_matrix[1][1] 0.008953 _atom_sites.fract_transf_matrix[1][2] 0.005169 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010338 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031466 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 97 ? ? ? A . n A 1 2 LEU 2 98 ? ? ? A . n A 1 3 LYS 3 99 ? ? ? A . n A 1 4 TYR 4 100 ? ? ? A . n A 1 5 PRO 5 101 ? ? ? A . n A 1 6 LEU 6 102 102 LEU LEU A . n A 1 7 ASN 7 103 103 ASN ASN A . n A 1 8 CYS 8 104 104 CYS CYS A . n A 1 9 ALA 9 105 105 ALA ALA A . n A 1 10 ASP 10 106 106 ASP ASP A . n A 1 11 PRO 11 107 107 PRO PRO A . n A 1 12 THR 12 108 108 THR THR A . n A 1 13 SER 13 109 109 SER SER A . n A 1 14 GLU 14 110 110 GLU GLU A . n A 1 15 ARG 15 111 111 ARG ARG A . n A 1 16 TRP 16 112 112 TRP TRP A . n A 1 17 PHE 17 113 113 PHE PHE A . n A 1 18 HIS 18 114 114 HIS HIS A . n A 1 19 GLY 19 115 115 GLY GLY A . n A 1 20 HIS 20 116 116 HIS HIS A . n A 1 21 LEU 21 117 117 LEU LEU A . n A 1 22 SER 22 118 118 SER SER A . n A 1 23 GLY 23 119 119 GLY GLY A . n A 1 24 LYS 24 120 120 LYS LYS A . n A 1 25 GLU 25 121 121 GLU GLU A . n A 1 26 ALA 26 122 122 ALA ALA A . n A 1 27 GLU 27 123 123 GLU GLU A . n A 1 28 LYS 28 124 124 LYS LYS A . n A 1 29 LEU 29 125 125 LEU LEU A . n A 1 30 LEU 30 126 126 LEU LEU A . n A 1 31 THR 31 127 127 THR THR A . n A 1 32 GLU 32 128 128 GLU GLU A . n A 1 33 LYS 33 129 129 LYS LYS A . n A 1 34 GLY 34 130 130 GLY GLY A . n A 1 35 LYS 35 131 131 LYS LYS A . n A 1 36 HIS 36 132 132 HIS HIS A . n A 1 37 GLY 37 133 133 GLY GLY A . n A 1 38 SER 38 134 134 SER SER A . n A 1 39 PHE 39 135 135 PHE PHE A . n A 1 40 LEU 40 136 136 LEU LEU A . n A 1 41 VAL 41 137 137 VAL VAL A . n A 1 42 ARG 42 138 138 ARG ARG A . n A 1 43 GLU 43 139 139 GLU GLU A . n A 1 44 SER 44 140 140 SER SER A . n A 1 45 GLN 45 141 141 GLN GLN A . n A 1 46 SER 46 142 142 SER SER A . n A 1 47 HIS 47 143 143 HIS HIS A . n A 1 48 PRO 48 144 144 PRO PRO A . n A 1 49 GLY 49 145 145 GLY GLY A . n A 1 50 ASP 50 146 146 ASP ASP A . n A 1 51 PHE 51 147 147 PHE PHE A . n A 1 52 VAL 52 148 148 VAL VAL A . n A 1 53 LEU 53 149 149 LEU LEU A . n A 1 54 SER 54 150 150 SER SER A . n A 1 55 VAL 55 151 151 VAL VAL A . n A 1 56 ARG 56 152 152 ARG ARG A . n A 1 57 THR 57 153 153 THR THR A . n A 1 58 GLY 58 154 154 GLY GLY A . n A 1 59 ASP 59 155 155 ASP ASP A . n A 1 60 ASP 60 156 156 ASP ASP A . n A 1 61 LYS 61 157 157 LYS LYS A . n A 1 62 GLY 62 158 ? ? ? A . n A 1 63 GLU 63 159 ? ? ? A . n A 1 64 SER 64 160 ? ? ? A . n A 1 65 ASN 65 161 ? ? ? A . n A 1 66 ASP 66 162 162 ASP ASP A . n A 1 67 GLY 67 163 163 GLY GLY A . n A 1 68 LYS 68 164 164 LYS LYS A . n A 1 69 SER 69 165 165 SER SER A . n A 1 70 LYS 70 166 166 LYS LYS A . n A 1 71 VAL 71 167 167 VAL VAL A . n A 1 72 THR 72 168 168 THR THR A . n A 1 73 HIS 73 169 169 HIS HIS A . n A 1 74 VAL 74 170 170 VAL VAL A . n A 1 75 MET 75 171 171 MET MET A . n A 1 76 ILE 76 172 172 ILE ILE A . n A 1 77 ARG 77 173 173 ARG ARG A . n A 1 78 CYS 78 174 174 CYS CYS A . n A 1 79 GLN 79 175 175 GLN GLN A . n A 1 80 GLU 80 176 176 GLU GLU A . n A 1 81 LEU 81 177 177 LEU LEU A . n A 1 82 LYS 82 178 178 LYS LYS A . n A 1 83 TYR 83 179 179 TYR TYR A . n A 1 84 ASP 84 180 180 ASP ASP A . n A 1 85 VAL 85 181 181 VAL VAL A . n A 1 86 GLY 86 182 182 GLY GLY A . n A 1 87 GLY 87 183 183 GLY GLY A . n A 1 88 GLY 88 184 184 GLY GLY A . n A 1 89 GLU 89 185 185 GLU GLU A . n A 1 90 ARG 90 186 186 ARG ARG A . n A 1 91 PHE 91 187 187 PHE PHE A . n A 1 92 ASP 92 188 188 ASP ASP A . n A 1 93 SER 93 189 189 SER SER A . n A 1 94 LEU 94 190 190 LEU LEU A . n A 1 95 THR 95 191 191 THR THR A . n A 1 96 ASP 96 192 192 ASP ASP A . n A 1 97 LEU 97 193 193 LEU LEU A . n A 1 98 VAL 98 194 194 VAL VAL A . n A 1 99 GLU 99 195 195 GLU GLU A . n A 1 100 HIS 100 196 196 HIS HIS A . n A 1 101 TYR 101 197 197 TYR TYR A . n A 1 102 LYS 102 198 198 LYS LYS A . n A 1 103 LYS 103 199 199 LYS LYS A . n A 1 104 ASN 104 200 200 ASN ASN A . n A 1 105 PRO 105 201 201 PRO PRO A . n A 1 106 MET 106 202 202 MET MET A . n A 1 107 VAL 107 203 203 VAL VAL A . n A 1 108 GLU 108 204 204 GLU GLU A . n A 1 109 THR 109 205 205 THR THR A . n A 1 110 LEU 110 206 206 LEU LEU A . n A 1 111 GLY 111 207 207 GLY GLY A . n A 1 112 THR 112 208 208 THR THR A . n A 1 113 VAL 113 209 209 VAL VAL A . n A 1 114 LEU 114 210 210 LEU LEU A . n A 1 115 GLN 115 211 211 GLN GLN A . n A 1 116 LEU 116 212 212 LEU LEU A . n A 1 117 LYS 117 213 213 LYS LYS A . n A 1 118 GLN 118 214 214 GLN GLN A . n A 1 119 PRO 119 215 215 PRO PRO A . n A 1 120 LEU 120 216 216 LEU LEU A . n A 1 121 ASN 121 217 217 ASN ASN A . n A 1 122 LYS 122 218 218 LYS LYS A . n A 1 123 GLU 123 219 219 GLU GLU A . n A 1 124 LYS 124 220 ? ? ? A . n B 2 1 VAL 1 1 ? ? ? B . n B 2 2 SER 2 2 2 SER SER B . n B 2 3 SER 3 3 3 SER SER B . n B 2 4 VAL 4 4 4 VAL VAL B . n B 2 5 PRO 5 5 5 PRO PRO B . n B 2 6 THR 6 6 6 THR THR B . n B 2 7 LYS 7 7 7 LYS LYS B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 GLU 9 9 9 GLU GLU B . n B 2 10 VAL 10 10 10 VAL VAL B . n B 2 11 VAL 11 11 11 VAL VAL B . n B 2 12 ALA 12 12 12 ALA ALA B . n B 2 13 ALA 13 13 13 ALA ALA B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 THR 16 16 16 THR THR B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 LEU 19 19 19 LEU LEU B . n B 2 20 ILE 20 20 20 ILE ILE B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 TRP 22 22 22 TRP TRP B . n B 2 23 ASP 23 23 23 ASP ASP B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 PRO 25 25 25 PRO PRO B . n B 2 26 ALA 26 26 26 ALA ALA B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 VAL 29 29 29 VAL VAL B . n B 2 30 ASP 30 30 30 ASP ASP B . n B 2 31 TYR 31 31 31 TYR TYR B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 VAL 33 33 33 VAL VAL B . n B 2 34 ILE 34 34 34 ILE ILE B . n B 2 35 THR 35 35 35 THR THR B . n B 2 36 TYR 36 36 36 TYR TYR B . n B 2 37 GLY 37 37 37 GLY GLY B . n B 2 38 GLU 38 38 38 GLU GLU B . n B 2 39 THR 39 39 39 THR THR B . n B 2 40 GLY 40 40 40 GLY GLY B . n B 2 41 TYR 41 41 41 TYR TYR B . n B 2 42 TRP 42 42 42 TRP TRP B . n B 2 43 PRO 43 43 43 PRO PRO B . n B 2 44 TYR 44 44 44 TYR TYR B . n B 2 45 TYR 45 45 45 TYR TYR B . n B 2 46 TRP 46 46 46 TRP TRP B . n B 2 47 GLN 47 47 47 GLN GLN B . n B 2 48 GLU 48 48 48 GLU GLU B . n B 2 49 PHE 49 49 49 PHE PHE B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 VAL 51 51 51 VAL VAL B . n B 2 52 PRO 52 52 52 PRO PRO B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 LYS 55 55 55 LYS LYS B . n B 2 56 SER 56 56 56 SER SER B . n B 2 57 THR 57 57 57 THR THR B . n B 2 58 ALA 58 58 58 ALA ALA B . n B 2 59 THR 59 59 59 THR THR B . n B 2 60 ILE 60 60 60 ILE ILE B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 GLY 62 62 62 GLY GLY B . n B 2 63 LEU 63 63 63 LEU LEU B . n B 2 64 LYS 64 64 64 LYS LYS B . n B 2 65 PRO 65 65 65 PRO PRO B . n B 2 66 GLY 66 66 66 GLY GLY B . n B 2 67 VAL 67 67 67 VAL VAL B . n B 2 68 ASP 68 68 68 ASP ASP B . n B 2 69 TYR 69 69 69 TYR TYR B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 ILE 71 71 71 ILE ILE B . n B 2 72 THR 72 72 72 THR THR B . n B 2 73 VAL 73 73 73 VAL VAL B . n B 2 74 TYR 74 74 74 TYR TYR B . n B 2 75 ALA 75 75 75 ALA ALA B . n B 2 76 GLY 76 76 76 GLY GLY B . n B 2 77 SER 77 77 77 SER SER B . n B 2 78 TYR 78 78 78 TYR TYR B . n B 2 79 ASP 79 79 79 ASP ASP B . n B 2 80 SER 80 80 80 SER SER B . n B 2 81 TYR 81 81 81 TYR TYR B . n B 2 82 TYR 82 82 82 TYR TYR B . n B 2 83 TYR 83 83 83 TYR TYR B . n B 2 84 TYR 84 84 84 TYR TYR B . n B 2 85 GLY 85 85 85 GLY GLY B . n B 2 86 SER 86 86 86 SER SER B . n B 2 87 PRO 87 87 87 PRO PRO B . n B 2 88 ILE 88 88 88 ILE ILE B . n B 2 89 SER 89 89 89 SER SER B . n B 2 90 ILE 90 90 90 ILE ILE B . n B 2 91 ASN 91 91 91 ASN ASN B . n B 2 92 TYR 92 92 92 TYR TYR B . n B 2 93 ARG 93 93 93 ARG ARG B . n B 2 94 THR 94 94 94 THR THR B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2110 ? 1 MORE -11 ? 1 'SSA (A^2)' 10480 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-28 2 'Structure model' 1 1 2013-09-11 3 'Structure model' 1 2 2013-09-25 4 'Structure model' 1 3 2013-11-20 5 'Structure model' 1 4 2014-03-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Structure summary' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 117 ? ? -162.74 112.72 2 1 LYS A 129 ? ? -143.21 -13.59 3 1 VAL A 181 ? ? -109.08 41.52 4 1 LYS A 213 ? ? -127.56 -94.61 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 97 ? A GLU 1 2 1 Y 1 A LEU 98 ? A LEU 2 3 1 Y 1 A LYS 99 ? A LYS 3 4 1 Y 1 A TYR 100 ? A TYR 4 5 1 Y 1 A PRO 101 ? A PRO 5 6 1 Y 1 A GLY 158 ? A GLY 62 7 1 Y 1 A GLU 159 ? A GLU 63 8 1 Y 1 A SER 160 ? A SER 64 9 1 Y 1 A ASN 161 ? A ASN 65 10 1 Y 1 A LYS 220 ? A LYS 124 11 1 Y 1 B VAL 1 ? B VAL 1 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 4 HOH HOH A . C 3 HOH 2 302 5 HOH HOH A . C 3 HOH 3 303 8 HOH HOH A . C 3 HOH 4 304 9 HOH HOH A . C 3 HOH 5 305 10 HOH HOH A . C 3 HOH 6 306 11 HOH HOH A . C 3 HOH 7 307 13 HOH HOH A . C 3 HOH 8 308 14 HOH HOH A . C 3 HOH 9 309 19 HOH HOH A . C 3 HOH 10 310 22 HOH HOH A . C 3 HOH 11 311 25 HOH HOH A . C 3 HOH 12 312 27 HOH HOH A . C 3 HOH 13 313 28 HOH HOH A . C 3 HOH 14 314 33 HOH HOH A . C 3 HOH 15 315 35 HOH HOH A . C 3 HOH 16 316 36 HOH HOH A . C 3 HOH 17 317 37 HOH HOH A . C 3 HOH 18 318 44 HOH HOH A . C 3 HOH 19 319 45 HOH HOH A . C 3 HOH 20 320 47 HOH HOH A . C 3 HOH 21 321 50 HOH HOH A . C 3 HOH 22 322 52 HOH HOH A . C 3 HOH 23 323 53 HOH HOH A . C 3 HOH 24 324 59 HOH HOH A . C 3 HOH 25 325 60 HOH HOH A . C 3 HOH 26 326 61 HOH HOH A . C 3 HOH 27 327 68 HOH HOH A . C 3 HOH 28 328 69 HOH HOH A . C 3 HOH 29 329 71 HOH HOH A . C 3 HOH 30 330 72 HOH HOH A . C 3 HOH 31 331 73 HOH HOH A . C 3 HOH 32 332 75 HOH HOH A . C 3 HOH 33 333 76 HOH HOH A . C 3 HOH 34 334 79 HOH HOH A . D 3 HOH 1 101 1 HOH HOH B . D 3 HOH 2 102 2 HOH HOH B . D 3 HOH 3 103 3 HOH HOH B . D 3 HOH 4 104 6 HOH HOH B . D 3 HOH 5 105 7 HOH HOH B . D 3 HOH 6 106 12 HOH HOH B . D 3 HOH 7 107 15 HOH HOH B . D 3 HOH 8 108 16 HOH HOH B . D 3 HOH 9 109 17 HOH HOH B . D 3 HOH 10 110 18 HOH HOH B . D 3 HOH 11 111 20 HOH HOH B . D 3 HOH 12 112 21 HOH HOH B . D 3 HOH 13 113 23 HOH HOH B . D 3 HOH 14 114 24 HOH HOH B . D 3 HOH 15 115 26 HOH HOH B . D 3 HOH 16 116 29 HOH HOH B . D 3 HOH 17 117 30 HOH HOH B . D 3 HOH 18 118 31 HOH HOH B . D 3 HOH 19 119 32 HOH HOH B . D 3 HOH 20 120 34 HOH HOH B . D 3 HOH 21 121 38 HOH HOH B . D 3 HOH 22 122 39 HOH HOH B . D 3 HOH 23 123 40 HOH HOH B . D 3 HOH 24 124 41 HOH HOH B . D 3 HOH 25 125 42 HOH HOH B . D 3 HOH 26 126 43 HOH HOH B . D 3 HOH 27 127 46 HOH HOH B . D 3 HOH 28 128 48 HOH HOH B . D 3 HOH 29 129 49 HOH HOH B . D 3 HOH 30 130 51 HOH HOH B . D 3 HOH 31 131 54 HOH HOH B . D 3 HOH 32 132 55 HOH HOH B . D 3 HOH 33 133 56 HOH HOH B . D 3 HOH 34 134 57 HOH HOH B . D 3 HOH 35 135 58 HOH HOH B . D 3 HOH 36 136 62 HOH HOH B . D 3 HOH 37 137 63 HOH HOH B . D 3 HOH 38 138 64 HOH HOH B . D 3 HOH 39 139 65 HOH HOH B . D 3 HOH 40 140 66 HOH HOH B . D 3 HOH 41 141 67 HOH HOH B . D 3 HOH 42 142 70 HOH HOH B . D 3 HOH 43 143 74 HOH HOH B . D 3 HOH 44 144 77 HOH HOH B . D 3 HOH 45 145 78 HOH HOH B . D 3 HOH 46 146 80 HOH HOH B . #