HEADER DNA BINDING PROTEIN 13-MAR-13 4JLX TITLE STRUCTURE OF PORCINE CYCLIC GMP-AMP SYNTHASE (CGAS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 135-495; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIGS,SWINE,WILD BOAR; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 GENE: MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.CIVRIL,K.P.HOPFNER REVDAT 3 20-MAR-24 4JLX 1 REMARK SEQADV REVDAT 2 10-JUL-13 4JLX 1 JRNL REVDAT 1 12-JUN-13 4JLX 0 JRNL AUTH F.CIVRIL,T.DEIMLING,C.C.O.MANN,A.ABLASSER,M.MOLDT,G.WITTE, JRNL AUTH 2 V.HORNUNG,K.P.HOPFNER JRNL TITL STRUCTURAL MECHANISM OF CYTOSOLIC DNA SENSING BY CGAS JRNL REF NATURE V. 498 332 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 23722159 JRNL DOI 10.1038/NATURE12305 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 51611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2578 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4702 - 5.2484 1.00 2733 141 0.1865 0.2098 REMARK 3 2 5.2484 - 4.1668 1.00 2746 148 0.1622 0.1935 REMARK 3 3 4.1668 - 3.6403 0.99 2717 143 0.1643 0.1778 REMARK 3 4 3.6403 - 3.3076 1.00 2732 143 0.1721 0.1799 REMARK 3 5 3.3076 - 3.0706 1.00 2759 145 0.1800 0.2113 REMARK 3 6 3.0706 - 2.8896 1.00 2696 143 0.1852 0.2290 REMARK 3 7 2.8896 - 2.7449 1.00 2768 144 0.1922 0.1816 REMARK 3 8 2.7449 - 2.6254 1.00 2712 141 0.2047 0.2200 REMARK 3 9 2.6254 - 2.5243 1.00 2762 144 0.2058 0.2737 REMARK 3 10 2.5243 - 2.4372 1.00 2708 145 0.2046 0.2761 REMARK 3 11 2.4372 - 2.3610 1.00 2721 142 0.2125 0.2238 REMARK 3 12 2.3610 - 2.2935 1.00 2770 150 0.2124 0.2785 REMARK 3 13 2.2935 - 2.2332 1.00 2725 142 0.2199 0.2725 REMARK 3 14 2.2332 - 2.1787 1.00 2747 142 0.2221 0.2721 REMARK 3 15 2.1787 - 2.1292 1.00 2726 147 0.2234 0.2646 REMARK 3 16 2.1292 - 2.0838 0.99 2743 144 0.2507 0.2888 REMARK 3 17 2.0838 - 2.0422 1.00 2692 139 0.2568 0.2787 REMARK 3 18 2.0422 - 2.0040 0.94 2576 135 0.2831 0.2916 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2991 REMARK 3 ANGLE : 1.066 4006 REMARK 3 CHIRALITY : 0.076 423 REMARK 3 PLANARITY : 0.004 509 REMARK 3 DIHEDRAL : 16.800 1159 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: INITIAL MODEL IS SAD WHICH IS USED FOR REMARK 3 MOLECULAR REPLACEMENT. REMARK 4 REMARK 4 4JLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078211. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00665 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51611 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 47.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.29950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.29950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.70100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.00700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.70100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.00700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.29950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.70100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.00700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.29950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.70100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.00700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 132 REMARK 465 ALA A 133 REMARK 465 MET A 134 REMARK 465 SER A 188 REMARK 465 TYR A 189 REMARK 465 TYR A 190 REMARK 465 GLU A 191 REMARK 465 ARG A 192 REMARK 465 VAL A 193 REMARK 465 LYS A 194 REMARK 465 ILE A 195 REMARK 465 ILE A 266 REMARK 465 GLU A 267 REMARK 465 ASP A 268 REMARK 465 ARG A 278 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 149 CB OG REMARK 480 ARG A 150 CB CG CD NE CZ NH1 NH2 REMARK 480 HIS A 151 CB CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 152 CB CG CD OE1 OE2 REMARK 480 ILE A 153 CB CG1 CG2 CD1 REMARK 480 SER A 154 CB OG REMARK 480 GLU A 155 CB CG CD OE1 OE2 REMARK 480 VAL A 160 CG1 CG2 REMARK 480 VAL A 163 CG1 CG2 REMARK 480 LEU A 168 CD1 CD2 REMARK 480 LEU A 171 CD1 CD2 REMARK 480 GLU A 175 CD OE1 OE2 REMARK 480 LYS A 179 CE NZ REMARK 480 THR A 186 OG1 CG2 REMARK 480 SER A 196 CB OG REMARK 480 ASN A 199 CG OD1 ND2 REMARK 480 GLU A 200 CG CD OE1 OE2 REMARK 480 PHE A 201 CD1 CD2 CE1 CE2 CZ REMARK 480 VAL A 203 CG1 CG2 REMARK 480 VAL A 209 CG1 CG2 REMARK 480 ARG A 211 NE CZ NH1 NH2 REMARK 480 GLN A 213 NE2 REMARK 480 LYS A 227 CD CE NZ REMARK 480 LYS A 229 CG CD CE NZ REMARK 480 ARG A 230 CB CG CD NE CZ NH1 NH2 REMARK 480 ASN A 231 OD1 ND2 REMARK 480 ILE A 245 CG2 CD1 REMARK 480 LEU A 252 CD1 REMARK 480 LYS A 257 CD CE NZ REMARK 480 ILE A 258 CD1 REMARK 480 ILE A 259 CD1 REMARK 480 LYS A 260 CD CE NZ REMARK 480 GLU A 261 CG CD OE1 OE2 REMARK 480 ILE A 263 CG1 CD1 REMARK 480 VAL A 271 CG2 REMARK 480 THR A 272 CG2 REMARK 480 ARG A 275 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 276 CG CD CE NZ REMARK 480 ARG A 277 NE CZ NH1 NH2 REMARK 480 SER A 288 OG REMARK 480 LYS A 289 CB CG CD CE NZ REMARK 480 ILE A 293 CG2 CD1 REMARK 480 VAL A 295 CG1 CG2 REMARK 480 ILE A 297 CD1 REMARK 480 ILE A 298 CD1 REMARK 480 LEU A 299 CD1 REMARK 480 GLN A 312 CD OE1 NE2 REMARK 480 LYS A 313 CE NZ REMARK 480 LYS A 339 CG CD CE NZ REMARK 480 LYS A 342 CG CD CE NZ REMARK 480 GLU A 343 CB CG CD OE1 OE2 REMARK 480 LYS A 361 CD CE NZ REMARK 480 ILE A 376 CD1 REMARK 480 LYS A 391 NZ REMARK 480 LYS A 399 CE NZ REMARK 480 LYS A 435 NZ REMARK 480 ASP A 471 OD1 OD2 REMARK 480 LYS A 483 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 149 -33.30 144.47 REMARK 500 ASN A 219 16.44 53.87 REMARK 500 LYS A 243 -129.23 53.19 REMARK 500 TRP A 320 -71.95 -100.94 REMARK 500 ASN A 366 71.86 -117.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 367 NE2 REMARK 620 2 CYS A 373 SG 113.1 REMARK 620 3 CYS A 374 SG 108.0 127.2 REMARK 620 4 CYS A 381 SG 99.5 99.3 105.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 507 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JLZ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONFLICTS (ASP 268 AND THR 269) ARE DUE TO POLYMORPHISM AS IT REMARK 999 IS NATURALLY OCCURRING. DBREF 4JLX A 135 497 UNP I3LM39 I3LM39_PIG 135 495 SEQADV 4JLX GLY A 132 UNP I3LM39 EXPRESSION TAG SEQADV 4JLX ALA A 133 UNP I3LM39 EXPRESSION TAG SEQADV 4JLX MET A 134 UNP I3LM39 EXPRESSION TAG SEQADV 4JLX ASP A 268 UNP I3LM39 SEE REMARK 999 SEQADV 4JLX THR A 269 UNP I3LM39 SEE REMARK 999 SEQRES 1 A 366 GLY ALA MET GLY ALA TRP LYS LEU GLN THR VAL LEU GLU SEQRES 2 A 366 LYS VAL ARG LEU SER ARG HIS GLU ILE SER GLU ALA ALA SEQRES 3 A 366 GLU VAL VAL ASN TRP VAL VAL GLU HIS LEU LEU ARG ARG SEQRES 4 A 366 LEU GLN GLY GLY GLU SER GLU PHE LYS GLY VAL ALA LEU SEQRES 5 A 366 LEU ARG THR GLY SER TYR TYR GLU ARG VAL LYS ILE SER SEQRES 6 A 366 ALA PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL SEQRES 7 A 366 PRO ARG ILE GLN LEU GLU GLU TYR CYS ASN SER GLY ALA SEQRES 8 A 366 HIS TYR PHE VAL LYS PHE LYS ARG ASN PRO GLY GLY ASN SEQRES 9 A 366 PRO LEU GLU GLN PHE LEU GLU LYS GLU ILE LEU SER ALA SEQRES 10 A 366 SER LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU SEQRES 11 A 366 GLU ILE LYS ASN ILE GLU ASP THR GLY VAL THR VAL GLU SEQRES 12 A 366 ARG LYS ARG ARG GLY SER PRO ALA VAL THR LEU LEU ILE SEQRES 13 A 366 SER LYS PRO LYS GLU ILE SER VAL ASP ILE ILE LEU ALA SEQRES 14 A 366 LEU GLU SER LYS SER SER TRP PRO ALA SER THR GLN LYS SEQRES 15 A 366 GLY LEU PRO ILE SER GLN TRP LEU GLY ALA LYS VAL LYS SEQRES 16 A 366 ASN ASN LEU LYS ARG GLN PRO PHE TYR LEU VAL PRO LYS SEQRES 17 A 366 HIS ALA LYS GLU GLY SER GLY PHE GLN GLU GLU THR TRP SEQRES 18 A 366 ARG LEU SER PHE SER HIS ILE GLU LYS ASP ILE LEU LYS SEQRES 19 A 366 ASN HIS GLY GLN SER LYS THR CYS CYS GLU ILE ASP GLY SEQRES 20 A 366 VAL LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS SEQRES 21 A 366 TYR LEU LEU GLU GLN LEU LYS LYS LYS PHE GLY ASN ARG SEQRES 22 A 366 ARG GLU LEU ALA LYS PHE CYS SER TYR HIS VAL LYS THR SEQRES 23 A 366 ALA PHE PHE HIS VAL CYS THR GLN ASP PRO HIS ASP ASN SEQRES 24 A 366 GLN TRP HIS LEU LYS ASN LEU GLU CYS CYS PHE ASP ASN SEQRES 25 A 366 CYS VAL ALA TYR PHE LEU GLN CYS LEU LYS THR GLU GLN SEQRES 26 A 366 LEU ALA ASN TYR PHE ILE PRO GLY VAL ASN LEU PHE SER SEQRES 27 A 366 ARG ASP LEU ILE ASP LYS PRO SER LYS GLU PHE LEU SER SEQRES 28 A 366 LYS GLN ILE GLU TYR GLU ARG ASN ASN GLY PHE PRO VAL SEQRES 29 A 366 PHE TRP HET ZN A 501 1 HET MLI A 502 7 HET GOL A 503 6 HET MLI A 504 7 HET PG4 A 505 13 HET MLI A 507 7 HET PG4 A 506 13 HETNAM ZN ZINC ION HETNAM MLI MALONATE ION HETNAM GOL GLYCEROL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 MLI 3(C3 H2 O4 2-) FORMUL 4 GOL C3 H8 O3 FORMUL 6 PG4 2(C8 H18 O5) FORMUL 9 HOH *126(H2 O) HELIX 1 1 LYS A 138 LEU A 148 1 11 HELIX 2 2 SER A 149 GLY A 174 1 26 HELIX 3 3 LEU A 237 GLN A 239 5 3 HELIX 4 4 SER A 247 ILE A 263 1 17 HELIX 5 5 PRO A 308 GLN A 312 5 5 HELIX 6 6 GLY A 322 ARG A 331 1 10 HELIX 7 7 PHE A 347 THR A 351 5 5 HELIX 8 8 PHE A 356 ASN A 366 1 11 HELIX 9 9 CYS A 382 PHE A 401 1 20 HELIX 10 10 CYS A 411 ASP A 426 1 16 HELIX 11 11 HIS A 428 TRP A 432 5 5 HELIX 12 12 HIS A 433 LYS A 435 5 3 HELIX 13 13 ASN A 436 GLU A 455 1 20 HELIX 14 14 ASP A 474 ASN A 491 1 18 HELIX 15 15 GLY A 492 TRP A 497 5 6 SHEET 1 A 7 ALA A 182 LEU A 184 0 SHEET 2 A 7 GLU A 200 GLU A 208 -1 O LYS A 206 N ALA A 182 SHEET 3 A 7 ILE A 293 SER A 303 1 O ILE A 298 N VAL A 203 SHEET 4 A 7 PHE A 334 VAL A 337 -1 O LEU A 336 N LEU A 301 SHEET 5 A 7 TRP A 352 SER A 355 -1 N ARG A 353 O VAL A 337 SHEET 6 A 7 HIS A 223 LYS A 227 -1 N TYR A 224 O TRP A 352 SHEET 7 A 7 GLN A 213 GLU A 216 -1 N GLU A 215 O PHE A 225 SHEET 1 B 5 ALA A 182 LEU A 184 0 SHEET 2 B 5 GLU A 200 GLU A 208 -1 O LYS A 206 N ALA A 182 SHEET 3 B 5 ILE A 293 SER A 303 1 O ILE A 298 N VAL A 203 SHEET 4 B 5 VAL A 283 ILE A 287 -1 N LEU A 285 O VAL A 295 SHEET 5 B 5 VAL A 271 VAL A 273 -1 N THR A 272 O LEU A 286 SHEET 1 C 2 LEU A 241 GLU A 242 0 SHEET 2 C 2 ILE A 245 LEU A 246 -1 O ILE A 245 N GLU A 242 LINK NE2 HIS A 367 ZN ZN A 501 1555 1555 2.09 LINK SG CYS A 373 ZN ZN A 501 1555 1555 2.31 LINK SG CYS A 374 ZN ZN A 501 1555 1555 2.35 LINK SG CYS A 381 ZN ZN A 501 1555 1555 2.36 CISPEP 1 LYS A 289 PRO A 290 0 0.31 SITE 1 AC1 4 HIS A 367 CYS A 373 CYS A 374 CYS A 381 SITE 1 AC2 4 LEU A 214 PRO A 308 ALA A 309 HOH A 698 SITE 1 AC3 1 HIS A 166 SITE 1 AC4 1 GLU A 215 SITE 1 AC5 9 ARG A 404 GLY A 464 ASN A 466 SER A 469 SITE 2 AC5 9 ARG A 470 PHE A 480 LYS A 483 GLN A 484 SITE 3 AC5 9 MLI A 507 SITE 1 AC6 10 ASP A 426 ASN A 430 GLN A 431 TRP A 432 SITE 2 AC6 10 HIS A 433 ASN A 436 CYS A 439 CYS A 440 SITE 3 AC6 10 ASN A 443 HOH A 654 SITE 1 AC7 6 LYS A 400 ARG A 470 ASP A 471 GLN A 484 SITE 2 AC7 6 TYR A 487 PG4 A 505 CRYST1 47.402 118.014 142.599 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007013 0.00000