HEADER IMMUNE SYSTEM/VIRAL PROTEIN 18-MAR-13 4JO8 TITLE CRYSTAL STRUCTURE OF THE ACTIVATING LY49H RECEPTOR IN COMPLEX WITH TITLE 2 M157 (G1F STRAIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: M157; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 29-291; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: KILLER CELL LECTIN-LIKE RECEPTOR 8; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 107-266; COMPND 11 SYNONYM: LYMPHOCYTE ANTIGEN 49H, LY-49H, T-CELL SURFACE GLYCOPROTEIN COMPND 12 LY-49H; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURID HERPESVIRUS 1; SOURCE 3 ORGANISM_COMMON: MUHV-1; SOURCE 4 ORGANISM_TAXID: 10366; SOURCE 5 GENE: M157; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293S; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 14 ORGANISM_COMMON: MOUSE; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 GENE: KLRA8, LY-49H, LY49-H, LY49H; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET30 KEYWDS C-TYPE LECTIN-LIKE DOMAIN, NATURAL KILLER RECEPTOR, VIRAL KEYWDS 2 IMMUNOEVASIN, IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.BERRY,N.NG,P.M.SAUNDERS,J.P.VIVIAN,J.LIN,F.A.DEUSS,A.J.CORBETT, AUTHOR 2 C.A.FORBES,J.M.WIDJAJA,L.C.SULLIVAN,A.D.MCALISTER,M.A.PERUGINI, AUTHOR 3 M.J.CALL,A.A.SCALZO,M.A.DEGLI-ESPOSTI,J.D.COUDERT,T.BEDDOE, AUTHOR 4 A.G.BROOKS,J.ROSSJOHN REVDAT 5 08-NOV-23 4JO8 1 REMARK HETSYN REVDAT 4 29-JUL-20 4JO8 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE REVDAT 3 10-JUL-13 4JO8 1 JRNL REMARK REVDAT 2 05-JUN-13 4JO8 1 JRNL TITLE REVDAT 1 22-MAY-13 4JO8 0 JRNL AUTH R.BERRY,N.NG,P.M.SAUNDERS,J.P.VIVIAN,J.LIN,F.A.DEUSS, JRNL AUTH 2 A.J.CORBETT,C.A.FORBES,J.M.WIDJAJA,L.C.SULLIVAN, JRNL AUTH 3 A.D.MCALISTER,M.A.PERUGINI,M.J.CALL,A.A.SCALZO, JRNL AUTH 4 M.A.DEGLI-ESPOSTI,J.D.COUDERT,T.BEDDOE,A.G.BROOKS,J.ROSSJOHN JRNL TITL TARGETING OF A NATURAL KILLER CELL RECEPTOR FAMILY BY A JRNL TITL 2 VIRAL IMMUNOEVASIN JRNL REF NAT.IMMUNOL. V. 14 699 2013 JRNL REFN ISSN 1529-2908 JRNL PMID 23666294 JRNL DOI 10.1038/NI.2605 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 9733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 468 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.12 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2781 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2193 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2646 REMARK 3 BIN R VALUE (WORKING SET) : 0.2166 REMARK 3 BIN FREE R VALUE : 0.2696 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.85 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 135 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2063 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 127.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 145.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.67660 REMARK 3 B22 (A**2) : -3.67660 REMARK 3 B33 (A**2) : 7.35320 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.865 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.880 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2118 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2870 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 996 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 56 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 296 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2118 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 291 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2264 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.40 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|34 - A|291 } REMARK 3 ORIGIN FOR THE GROUP (A): 21.947 -16.977 21.040 REMARK 3 T TENSOR REMARK 3 T11: -0.4037 T22: 0.0540 REMARK 3 T33: -0.4323 T12: 0.2115 REMARK 3 T13: -0.1753 T23: -0.1675 REMARK 3 L TENSOR REMARK 3 L11: 7.5836 L22: 2.4837 REMARK 3 L33: 7.0492 L12: -1.0792 REMARK 3 L13: 0.5606 L23: 1.0292 REMARK 3 S TENSOR REMARK 3 S11: -0.1973 S12: 1.3539 S13: -0.1826 REMARK 3 S21: -0.2889 S22: -0.2115 S23: 0.6742 REMARK 3 S31: -0.4780 S32: -1.1915 S33: 0.4088 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|109 - B|130 } REMARK 3 ORIGIN FOR THE GROUP (A): 42.6656 -8.7532 29.5096 REMARK 3 T TENSOR REMARK 3 T11: -0.1199 T22: -0.0005 REMARK 3 T33: -0.0105 T12: 0.0066 REMARK 3 T13: -0.0673 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 4.1845 L22: -2.0412 REMARK 3 L33: 1.5637 L12: -0.9478 REMARK 3 L13: 1.9497 L23: 5.7889 REMARK 3 S TENSOR REMARK 3 S11: 0.1046 S12: -0.2804 S13: 0.0640 REMARK 3 S21: 0.1019 S22: -0.0415 S23: -0.1053 REMARK 3 S31: -0.6384 S32: -0.0144 S33: -0.0631 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078294. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9436 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9772 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 76.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2NYK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES 0.5% PEG4000, 10% 2 REMARK 280 -PROPANOL, 50MM MAGNESIUM CHLORIDE, PH 7, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.45667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.91333 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 88.91333 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.45667 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 87.87000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.45667 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 29 REMARK 465 GLY A 30 REMARK 465 ASP A 31 REMARK 465 MET A 32 REMARK 465 TYR A 33 REMARK 465 GLY A 75 REMARK 465 GLY A 76 REMARK 465 ASP A 77 REMARK 465 LYS A 78 REMARK 465 PHE A 207 REMARK 465 TRP A 208 REMARK 465 TYR A 209 REMARK 465 ASN A 210 REMARK 465 THR A 211 REMARK 465 THR A 212 REMARK 465 GLY A 213 REMARK 465 LEU A 214 REMARK 465 THR A 215 REMARK 465 THR A 216 REMARK 465 LEU A 233 REMARK 465 ASN A 234 REMARK 465 THR A 235 REMARK 465 ASN A 236 REMARK 465 SER A 237 REMARK 465 SER A 238 REMARK 465 ALA A 239 REMARK 465 HIS A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 MET B 107 REMARK 465 GLY B 108 REMARK 465 SER B 131 REMARK 465 ASP B 132 REMARK 465 SER B 133 REMARK 465 SER B 134 REMARK 465 ARG B 135 REMARK 465 ASP B 136 REMARK 465 THR B 137 REMARK 465 GLY B 138 REMARK 465 ARG B 139 REMARK 465 GLY B 140 REMARK 465 VAL B 141 REMARK 465 LYS B 142 REMARK 465 TYR B 143 REMARK 465 TRP B 144 REMARK 465 PHE B 145 REMARK 465 CYS B 146 REMARK 465 TYR B 147 REMARK 465 GLY B 148 REMARK 465 THR B 149 REMARK 465 LYS B 150 REMARK 465 CYS B 151 REMARK 465 TYR B 152 REMARK 465 TYR B 153 REMARK 465 PHE B 154 REMARK 465 ILE B 155 REMARK 465 MET B 156 REMARK 465 ASN B 157 REMARK 465 LYS B 158 REMARK 465 THR B 159 REMARK 465 THR B 160 REMARK 465 TRP B 161 REMARK 465 SER B 162 REMARK 465 GLY B 163 REMARK 465 CYS B 164 REMARK 465 LYS B 165 REMARK 465 ALA B 166 REMARK 465 ASN B 167 REMARK 465 CYS B 168 REMARK 465 GLN B 169 REMARK 465 HIS B 170 REMARK 465 TYR B 171 REMARK 465 SER B 172 REMARK 465 VAL B 173 REMARK 465 PRO B 174 REMARK 465 ILE B 175 REMARK 465 VAL B 176 REMARK 465 LYS B 177 REMARK 465 ILE B 178 REMARK 465 GLU B 179 REMARK 465 ASP B 180 REMARK 465 GLU B 181 REMARK 465 ASP B 182 REMARK 465 GLU B 183 REMARK 465 LEU B 184 REMARK 465 LYS B 185 REMARK 465 PHE B 186 REMARK 465 LEU B 187 REMARK 465 GLN B 188 REMARK 465 ARG B 189 REMARK 465 HIS B 190 REMARK 465 VAL B 191 REMARK 465 ILE B 192 REMARK 465 LEU B 193 REMARK 465 GLU B 194 REMARK 465 SER B 195 REMARK 465 TYR B 196 REMARK 465 TRP B 197 REMARK 465 ILE B 198 REMARK 465 GLY B 199 REMARK 465 LEU B 200 REMARK 465 SER B 201 REMARK 465 TYR B 202 REMARK 465 ASP B 203 REMARK 465 LYS B 204 REMARK 465 LYS B 205 REMARK 465 LYS B 206 REMARK 465 LYS B 207 REMARK 465 GLU B 208 REMARK 465 TRP B 209 REMARK 465 ALA B 210 REMARK 465 TRP B 211 REMARK 465 ILE B 212 REMARK 465 HIS B 213 REMARK 465 ASN B 214 REMARK 465 GLY B 215 REMARK 465 GLN B 216 REMARK 465 SER B 217 REMARK 465 LYS B 218 REMARK 465 LEU B 219 REMARK 465 ASP B 220 REMARK 465 MET B 221 REMARK 465 LYS B 222 REMARK 465 ILE B 223 REMARK 465 LYS B 224 REMARK 465 LYS B 225 REMARK 465 MET B 226 REMARK 465 ASN B 227 REMARK 465 PHE B 228 REMARK 465 THR B 229 REMARK 465 SER B 230 REMARK 465 ARG B 231 REMARK 465 GLY B 232 REMARK 465 CYS B 233 REMARK 465 VAL B 234 REMARK 465 PHE B 235 REMARK 465 LEU B 236 REMARK 465 SER B 237 REMARK 465 LYS B 238 REMARK 465 ALA B 239 REMARK 465 ARG B 240 REMARK 465 ILE B 241 REMARK 465 GLU B 242 REMARK 465 ASP B 243 REMARK 465 THR B 244 REMARK 465 ASP B 245 REMARK 465 CYS B 246 REMARK 465 ASN B 247 REMARK 465 THR B 248 REMARK 465 PRO B 249 REMARK 465 TYR B 250 REMARK 465 TYR B 251 REMARK 465 CYS B 252 REMARK 465 ILE B 253 REMARK 465 CYS B 254 REMARK 465 GLY B 255 REMARK 465 LYS B 256 REMARK 465 LYS B 257 REMARK 465 LEU B 258 REMARK 465 ASP B 259 REMARK 465 LYS B 260 REMARK 465 PHE B 261 REMARK 465 PRO B 262 REMARK 465 ASP B 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 36 CB CG OD1 ND2 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLU A 243 REMARK 475 LYS A 255 REMARK 475 ALA A 256 REMARK 475 PRO A 257 REMARK 475 GLY A 258 REMARK 475 SER A 259 REMARK 475 HIS A 260 REMARK 475 ALA A 261 REMARK 475 GLN A 262 REMARK 475 ARG A 263 REMARK 475 VAL A 276 REMARK 475 THR A 277 REMARK 475 PRO A 278 REMARK 475 PRO A 279 REMARK 475 SER A 280 REMARK 475 GLN A 281 REMARK 475 TYR A 282 REMARK 475 ARG A 283 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 34 CG1 CG2 CD1 REMARK 480 VAL A 35 CG1 CG2 REMARK 480 LEU A 42 CG CD1 CD2 REMARK 480 GLU A 47 CG CD OE1 OE2 REMARK 480 GLU A 49 CG CD OE1 OE2 REMARK 480 ILE A 62 CD1 REMARK 480 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 79 CG OD1 OD2 REMARK 480 LYS A 81 CD CE NZ REMARK 480 ILE A 82 CD1 REMARK 480 LYS A 84 CD CE NZ REMARK 480 ILE A 85 CG2 CD1 REMARK 480 LYS A 103 CG CD CE NZ REMARK 480 ARG A 119 CD NE CZ NH1 NH2 REMARK 480 LEU A 129 CG CD1 CD2 REMARK 480 ARG A 145 CD NE CZ NH1 NH2 REMARK 480 LYS A 154 CG CD CE NZ REMARK 480 LYS A 169 CE NZ REMARK 480 ASN A 179 CG OD1 ND2 REMARK 480 GLU A 182 CD OE1 OE2 REMARK 480 ILE A 183 CD1 REMARK 480 ARG A 188 CG CD NE CZ NH1 NH2 REMARK 480 VAL A 191 CB CG1 CG2 REMARK 480 LEU A 194 CG CD1 CD2 REMARK 480 LYS A 195 CD CE NZ REMARK 480 GLN A 196 CD OE1 NE2 REMARK 480 MET A 200 CB CG SD CE REMARK 480 GLU A 204 CG CD OE1 OE2 REMARK 480 VAL A 205 CB CG1 CG2 REMARK 480 GLU A 206 CB CG CD OE1 OE2 REMARK 480 VAL A 219 CG1 CG2 REMARK 480 SER A 221 CB OG REMARK 480 ARG A 222 CB CG CD NE CZ NH1 NH2 REMARK 480 VAL A 229 CG1 CG2 REMARK 480 GLU A 230 CB CG CD OE1 OE2 REMARK 480 LEU A 231 CG CD1 CD2 REMARK 480 ILE A 240 CD1 REMARK 480 THR A 242 CB OG1 CG2 REMARK 480 GLU A 244 CB CG REMARK 480 SER A 245 OG REMARK 480 VAL A 252 CG1 CG2 REMARK 480 TYR A 265 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR A 265 OH REMARK 480 VAL A 266 CG1 CG2 REMARK 480 SER A 269 OG REMARK 480 LEU A 270 CD1 CD2 REMARK 480 LYS A 273 CE NZ REMARK 480 VAL A 275 CG1 CG2 REMARK 480 LYS A 285 CG CD CE NZ REMARK 480 ARG A 286 CG CD NE CZ NH1 NH2 REMARK 480 PRO A 288 CB CG CD REMARK 480 VAL A 289 CG1 CG2 REMARK 480 GLU B 111 CD OE1 OE2 REMARK 480 GLU B 114 CG CD OE1 OE2 REMARK 480 LYS B 117 CD CE NZ REMARK 480 ARG B 118 CD NE CZ NH1 NH2 REMARK 480 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 126 CG CD OE1 OE2 REMARK 480 LYS B 128 CG CD CE NZ REMARK 480 SER B 129 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 20.66 49.06 REMARK 500 GLU A 182 -70.39 -58.71 REMARK 500 GLU A 244 -156.60 -153.84 REMARK 500 GLN A 262 -6.47 66.90 REMARK 500 SER B 129 53.08 -101.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF ENTITY2 CORRESPONDS TO THE H2 ISOFORM FOUND IN UNP REMARK 999 Q60682. DBREF 4JO8 A 29 291 UNP Q6XK91 Q6XK91_MUHV1 29 291 DBREF 4JO8 B 107 263 UNP Q60682 KLRA8_MOUSE 107 263 SEQADV 4JO8 ALA A 29 UNP Q6XK91 PRO 29 ENGINEERED MUTATION SEQADV 4JO8 GLY A 30 UNP Q6XK91 ASP 30 ENGINEERED MUTATION SEQADV 4JO8 HIS A 292 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 HIS A 293 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 HIS A 294 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 HIS A 295 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 HIS A 296 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 HIS A 297 UNP Q6XK91 EXPRESSION TAG SEQADV 4JO8 MET B 107 UNP Q60682 ARG 107 ENGINEERED MUTATION SEQADV 4JO8 GLY B 108 UNP Q60682 PRO 108 ENGINEERED MUTATION SEQADV 4JO8 MET B 110 UNP Q60682 TYR 110 ENGINEERED MUTATION SEQRES 1 A 269 ALA GLY ASP MET TYR ILE VAL ASN PRO ASP ASP LEU GLN SEQRES 2 A 269 LEU THR PHE THR MET GLU PHE GLU VAL THR VAL THR ARG SEQRES 3 A 269 ASP GLY PHE HIS LYS ARG THR ILE SER VAL ASP ASN GLY SEQRES 4 A 269 ARG PRO VAL VAL VAL TRP ASP GLY GLY ASP LYS ASP PRO SEQRES 5 A 269 LYS ILE CYS LYS ILE CYS PRO ALA VAL ASN SER ILE ASN SEQRES 6 A 269 THR GLU ASN ILE PHE LEU ASP ILE GLN LYS MET ARG LEU SEQRES 7 A 269 ASN ASN LEU LEU ALA GLN GLY LEU TRP ASP ILE GLN ARG SEQRES 8 A 269 ILE CYS VAL ARG TYR VAL CYS LEU PHE LEU GLY PHE ASP SEQRES 9 A 269 VAL VAL CYS ASP VAL TYR HIS THR THR ASP ARG VAL ARG SEQRES 10 A 269 ALA ALA TYR THR ARG GLN THR GLY LYS ILE ASP ILE GLN SEQRES 11 A 269 GLY SER GLY THR PHE SER THR SER ASP ALA LYS GLY ILE SEQRES 12 A 269 GLY THR TYR MET ILE GLU SER ASN VAL ARG GLU ILE LYS SEQRES 13 A 269 ASN LYS TRP ARG PRO THR VAL GLN LYS LEU LYS GLN LEU SEQRES 14 A 269 GLY TYR MET ASN GLU THR GLU VAL GLU PHE TRP TYR ASN SEQRES 15 A 269 THR THR GLY LEU THR THR CYS VAL VAL THR SER ARG SER SEQRES 16 A 269 ASN VAL PRO PHE THR VAL GLU LEU SER LEU ASN THR ASN SEQRES 17 A 269 SER SER ALA ILE VAL THR GLU GLU SER THR VAL ASP CYS SEQRES 18 A 269 GLN THR VAL THR VAL LYS ALA PRO GLY SER HIS ALA GLN SEQRES 19 A 269 ARG CYS TYR VAL THR SER SER LEU GLY TRP LYS GLY VAL SEQRES 20 A 269 VAL THR PRO PRO SER GLN TYR ARG THR LYS ARG ALA PRO SEQRES 21 A 269 VAL ASN ILE HIS HIS HIS HIS HIS HIS SEQRES 1 B 157 MET GLY SER MET GLU LEU LEU GLU TYR ILE LYS ARG GLU SEQRES 2 B 157 GLN GLU ARG TRP ASP SER GLU THR LYS SER VAL SER ASP SEQRES 3 B 157 SER SER ARG ASP THR GLY ARG GLY VAL LYS TYR TRP PHE SEQRES 4 B 157 CYS TYR GLY THR LYS CYS TYR TYR PHE ILE MET ASN LYS SEQRES 5 B 157 THR THR TRP SER GLY CYS LYS ALA ASN CYS GLN HIS TYR SEQRES 6 B 157 SER VAL PRO ILE VAL LYS ILE GLU ASP GLU ASP GLU LEU SEQRES 7 B 157 LYS PHE LEU GLN ARG HIS VAL ILE LEU GLU SER TYR TRP SEQRES 8 B 157 ILE GLY LEU SER TYR ASP LYS LYS LYS LYS GLU TRP ALA SEQRES 9 B 157 TRP ILE HIS ASN GLY GLN SER LYS LEU ASP MET LYS ILE SEQRES 10 B 157 LYS LYS MET ASN PHE THR SER ARG GLY CYS VAL PHE LEU SEQRES 11 B 157 SER LYS ALA ARG ILE GLU ASP THR ASP CYS ASN THR PRO SEQRES 12 B 157 TYR TYR CYS ILE CYS GLY LYS LYS LEU ASP LYS PHE PRO SEQRES 13 B 157 ASP MODRES 4JO8 ASN A 201 ASN GLYCOSYLATION SITE HET NAG A 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 HELIX 1 1 ASN A 36 LEU A 42 1 7 HELIX 2 2 ALA A 88 SER A 91 5 4 HELIX 3 3 ILE A 92 GLY A 113 1 22 HELIX 4 4 SER A 164 LYS A 169 1 6 HELIX 5 5 THR A 173 ASN A 179 1 7 HELIX 6 6 ASN A 179 LEU A 194 1 16 HELIX 7 7 LYS A 195 GLY A 198 5 4 HELIX 8 8 TYR A 199 ASN A 201 5 3 HELIX 9 9 MET B 110 SER B 129 1 20 SHEET 1 A 8 LYS A 81 ILE A 82 0 SHEET 2 A 8 PRO A 69 TRP A 73 -1 N VAL A 72 O LYS A 81 SHEET 3 A 8 HIS A 58 VAL A 64 -1 N ILE A 62 O VAL A 70 SHEET 4 A 8 THR A 43 THR A 53 -1 N THR A 51 O LYS A 59 SHEET 5 A 8 ARG A 119 LEU A 129 -1 O TYR A 124 N PHE A 48 SHEET 6 A 8 VAL A 133 THR A 140 -1 O TYR A 138 N ARG A 123 SHEET 7 A 8 VAL A 144 TYR A 148 -1 O ALA A 146 N HIS A 139 SHEET 8 A 8 ILE A 155 GLY A 159 -1 O GLN A 158 N ARG A 145 SHEET 1 B 4 THR A 203 VAL A 205 0 SHEET 2 B 4 VAL A 218 SER A 221 -1 O THR A 220 N GLU A 204 SHEET 3 B 4 GLN A 250 VAL A 254 -1 O VAL A 252 N VAL A 219 SHEET 4 B 4 VAL A 241 GLU A 243 -1 N THR A 242 O THR A 253 SHEET 1 C 4 PHE A 227 LEU A 231 0 SHEET 2 C 4 CYS A 264 SER A 268 -1 O TYR A 265 N GLU A 230 SHEET 3 C 4 TRP A 272 VAL A 275 -1 O GLY A 274 N VAL A 266 SHEET 4 C 4 VAL A 289 ASN A 290 -1 O VAL A 289 N VAL A 275 SSBOND 1 CYS A 83 CYS A 86 1555 1555 2.04 SSBOND 2 CYS A 126 CYS A 135 1555 1555 2.06 SSBOND 3 CYS A 217 CYS A 264 1555 1555 2.04 LINK ND2 ASN A 201 C1 NAG A 301 1555 1555 1.44 CISPEP 1 THR A 277 PRO A 278 0 1.89 CRYST1 87.870 87.870 133.370 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011380 0.006571 0.000000 0.00000 SCALE2 0.000000 0.013141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007498 0.00000