HEADER METAL BINDING PROTEIN 19-MAR-13 4JPD TITLE THE STRUCTURE OF CYAY FROM BURKHOLDERIA CENOCEPACIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN CYAY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: J2315 / LMG 16656; SOURCE 5 GENE: CYAY, BCEJ2315_02750, BCAL0273; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SSGCID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 2 CYAY, FRATAXIN, IRON BINDING PROTEIN, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 20-SEP-23 4JPD 1 REMARK SEQADV REVDAT 1 27-MAR-13 4JPD 0 JRNL AUTH M.C.CLIFTON,D.DAVIES,B.SANKARAN JRNL TITL THE STRUCTURE OF CYAY FROM BURKHOLDERIA CENOCEPACIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 11700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 584 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 805 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.1860 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.2280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 832 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.889 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 898 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 821 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1234 ; 1.349 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1882 ; 0.775 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 122 ; 5.785 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 43 ;37.008 ;24.186 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 135 ;11.243 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;13.889 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1060 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 214 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 451 ; 0.895 ; 0.893 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 448 ; 0.869 ; 0.883 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 563 ; 1.548 ; 1.314 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 68.6596 55.7818 49.4496 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.0854 REMARK 3 T33: 0.0585 T12: 0.0069 REMARK 3 T13: 0.0063 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 4.4269 L22: 0.7888 REMARK 3 L33: 1.4161 L12: -1.5942 REMARK 3 L13: 2.3137 L23: -0.6738 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.1979 S13: 0.0400 REMARK 3 S21: -0.0179 S22: -0.0117 S23: -0.0330 REMARK 3 S31: -0.0082 S32: 0.1439 S33: 0.0344 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 69.5247 46.7606 45.2067 REMARK 3 T TENSOR REMARK 3 T11: 0.0519 T22: 0.0554 REMARK 3 T33: 0.0349 T12: 0.0257 REMARK 3 T13: 0.0069 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 1.1871 L22: 0.8720 REMARK 3 L33: 1.4734 L12: -0.2859 REMARK 3 L13: -0.3591 L23: 0.2367 REMARK 3 S TENSOR REMARK 3 S11: -0.0208 S12: 0.0665 S13: -0.0483 REMARK 3 S21: -0.0206 S22: 0.0472 S23: -0.0521 REMARK 3 S31: 0.1356 S32: 0.0908 S33: -0.0263 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 74.4595 40.5597 52.8845 REMARK 3 T TENSOR REMARK 3 T11: 0.1332 T22: 0.1307 REMARK 3 T33: 0.0434 T12: 0.1120 REMARK 3 T13: 0.0247 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 5.0352 L22: 0.8526 REMARK 3 L33: 7.1880 L12: 0.1103 REMARK 3 L13: -2.3942 L23: 2.2123 REMARK 3 S TENSOR REMARK 3 S11: -0.2670 S12: -0.2424 S13: -0.1394 REMARK 3 S21: 0.1264 S22: 0.0956 S23: 0.0381 REMARK 3 S31: 0.5004 S32: 0.4816 S33: 0.1714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11700 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: PDB ENTRY 1EW4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG400, 200MM LISO4, 100MM NA REMARK 280 ACETATE, 9.46MG/ML BUCEA.18084.A.PW33863, DIRECT CRYOPROTECTION, REMARK 280 PH 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.01000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.01000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 48.01000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 48.01000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 48.01000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 48.01000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 48.01000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 48.01000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 48.01000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 48.01000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 48.01000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 24.00500 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 72.01500 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 24.00500 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 24.00500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 72.01500 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 24.00500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 72.01500 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 72.01500 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 72.01500 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 72.01500 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 24.00500 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 72.01500 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 24.00500 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 24.00500 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 72.01500 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 24.00500 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 24.00500 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 72.01500 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 72.01500 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 72.01500 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 72.01500 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 24.00500 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 72.01500 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 24.00500 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 24.00500 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 24.00500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -174.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 120.02500 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 120.02500 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 120.02500 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 120.02500 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 120.02500 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 120.02500 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 120.02500 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 120.02500 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 120.02500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 203 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 A 204 LIES ON A SPECIAL POSITION. REMARK 375 O4 SO4 A 204 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 311 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 328 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 343 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 412 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 470 ASP A 28 CG OD1 OD2 REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 403 O HOH A 403 13545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BUCEA.18084.A RELATED DB: TARGETTRACK DBREF 4JPD A 1 108 UNP B4E5Z6 CYAY_BURCJ 1 108 SEQADV 4JPD GLY A -3 UNP B4E5Z6 EXPRESSION TAG SEQADV 4JPD PRO A -2 UNP B4E5Z6 EXPRESSION TAG SEQADV 4JPD GLY A -1 UNP B4E5Z6 EXPRESSION TAG SEQADV 4JPD SER A 0 UNP B4E5Z6 EXPRESSION TAG SEQRES 1 A 112 GLY PRO GLY SER MET SER ASP THR GLU TYR LEU ALA ARG SEQRES 2 A 112 ALA GLU ALA VAL LEU ALA ALA VAL GLU ARG THR VAL ASP SEQRES 3 A 112 VAL ALA ASN ASP GLY ASP HIS ASP ILE ASP LEU GLU ARG SEQRES 4 A 112 ASN GLY SER VAL LEU THR LEU THR PHE GLU ASN GLY SER SEQRES 5 A 112 LYS ILE ILE VAL ASN LEU GLN PRO PRO MET LYS GLU VAL SEQRES 6 A 112 TRP ILE ALA ALA LYS ALA GLY GLY PHE HIS TYR ARG PHE SEQRES 7 A 112 ILE ASP GLY GLU TRP ARG ASP THR ARG THR GLY THR GLU SEQRES 8 A 112 PHE PHE SER ALA LEU THR ASP TYR ALA THR GLN GLN ALA SEQRES 9 A 112 GLY LEU PRO ILE THR PHE SER ALA HET ACT A 201 4 HET ACT A 202 4 HET NA A 203 1 HET SO4 A 204 5 HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 NA NA 1+ FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *115(H2 O) HELIX 1 1 ASP A 3 GLY A 27 1 25 HELIX 2 2 PRO A 56 MET A 58 5 3 HELIX 3 3 GLU A 87 GLY A 101 1 15 SHEET 1 A 6 ASP A 32 ASN A 36 0 SHEET 2 A 6 VAL A 39 THR A 43 -1 O THR A 41 N GLU A 34 SHEET 3 A 6 LYS A 49 GLN A 55 -1 O ILE A 50 N LEU A 42 SHEET 4 A 6 GLU A 60 ALA A 65 -1 O TRP A 62 N ASN A 53 SHEET 5 A 6 GLY A 68 ILE A 75 -1 O GLY A 68 N ALA A 65 SHEET 6 A 6 GLU A 78 ASP A 81 -1 O GLU A 78 N ILE A 75 SITE 1 AC1 7 HIS A 29 ASP A 30 ILE A 31 PHE A 44 SITE 2 AC1 7 GLU A 45 ALA A 100 HOH A 320 SITE 1 AC2 5 HIS A 71 THR A 82 ARG A 83 HOH A 313 SITE 2 AC2 5 HOH A 351 SITE 1 AC3 1 GLY A 77 SITE 1 AC4 3 ARG A 9 HOH A 370 HOH A 374 CRYST1 96.020 96.020 96.020 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010414 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010414 0.00000