data_4JWT # _entry.id 4JWT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4JWT RCSB RCSB078603 WWPDB D_1000078603 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-029304 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4JWT _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-03-27 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sampathkumar, P.' 1 'Almo, S.C.' 2 'New York Structural Genomics Research Consortium (NYSGRC)' 3 # _citation.id primary _citation.title ;Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Sulfurimonas denitrificans DSM 1251 ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sampathkumar, P.' 1 primary 'Gizzi, A.' 2 primary 'Ahmed, M.' 3 primary 'Banu, N.' 4 primary 'Bhosle, R.' 5 primary 'Bonanno, J.' 6 primary 'Chamala, S.' 7 primary 'Chowdhury, S.' 8 primary 'Fiser, A.' 9 primary 'Glenn, A.S.' 10 primary 'Hammonds, J.' 11 primary 'Hillerich, B.' 12 primary 'Khafizov, K.' 13 primary 'Lafleur, J.' 14 primary 'Suarez, J.' 15 primary 'Haapalainen, A.' 16 primary 'Love, J.D.' 17 primary 'Stead, M.' 18 primary 'Seidel, R.' 19 primary 'Toro, R.' 20 primary 'Schramm, V.L.' 21 primary 'Almo, S.C.' 22 # _cell.entry_id 4JWT _cell.length_a 77.598 _cell.length_b 77.598 _cell.length_c 228.425 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JWT _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methylthioadenosine nucleosidase' 28637.805 1 3.2.2.16 ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 3 non-polymer syn ADENINE 135.127 1 ? ? ? ? 4 water nat water 18.015 139 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHHSSGVDLGTENLYFQS(MSE)KIAI(MSE)GA(MSE)PEEISPILEKIGSYKSTSYAGNKYYEATYQGVE LVIAYSKIGKVFSALSAAT(MSE)IEHFGATKLLFSGVAGAISTNLKVGDLIVATKLSQHDLDITAFGHPYGYVPEGSVF VEADKD(MSE)IELSKKVALE(MSE)GKSVQEGIIATGDQFVANEERKNWIGTTFGADALE(MSE)EGGSVGVVCNALNI PFFILRSISDAAD(MSE)DASFSFDEFLESSAKESAEFI(MSE)K(MSE)VDELVALPLQDIK ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMKIAIMGAMPEEISPILEKIGSYKSTSYAGNKYYEATYQGVELVIAYSKIGKVFSALS AATMIEHFGATKLLFSGVAGAISTNLKVGDLIVATKLSQHDLDITAFGHPYGYVPEGSVFVEADKDMIELSKKVALEMGK SVQEGIIATGDQFVANEERKNWIGTTFGADALEMEGGSVGVVCNALNIPFFILRSISDAADMDASFSFDEFLESSAKESA EFIMKMVDELVALPLQDIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-029304 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MSE n 1 24 LYS n 1 25 ILE n 1 26 ALA n 1 27 ILE n 1 28 MSE n 1 29 GLY n 1 30 ALA n 1 31 MSE n 1 32 PRO n 1 33 GLU n 1 34 GLU n 1 35 ILE n 1 36 SER n 1 37 PRO n 1 38 ILE n 1 39 LEU n 1 40 GLU n 1 41 LYS n 1 42 ILE n 1 43 GLY n 1 44 SER n 1 45 TYR n 1 46 LYS n 1 47 SER n 1 48 THR n 1 49 SER n 1 50 TYR n 1 51 ALA n 1 52 GLY n 1 53 ASN n 1 54 LYS n 1 55 TYR n 1 56 TYR n 1 57 GLU n 1 58 ALA n 1 59 THR n 1 60 TYR n 1 61 GLN n 1 62 GLY n 1 63 VAL n 1 64 GLU n 1 65 LEU n 1 66 VAL n 1 67 ILE n 1 68 ALA n 1 69 TYR n 1 70 SER n 1 71 LYS n 1 72 ILE n 1 73 GLY n 1 74 LYS n 1 75 VAL n 1 76 PHE n 1 77 SER n 1 78 ALA n 1 79 LEU n 1 80 SER n 1 81 ALA n 1 82 ALA n 1 83 THR n 1 84 MSE n 1 85 ILE n 1 86 GLU n 1 87 HIS n 1 88 PHE n 1 89 GLY n 1 90 ALA n 1 91 THR n 1 92 LYS n 1 93 LEU n 1 94 LEU n 1 95 PHE n 1 96 SER n 1 97 GLY n 1 98 VAL n 1 99 ALA n 1 100 GLY n 1 101 ALA n 1 102 ILE n 1 103 SER n 1 104 THR n 1 105 ASN n 1 106 LEU n 1 107 LYS n 1 108 VAL n 1 109 GLY n 1 110 ASP n 1 111 LEU n 1 112 ILE n 1 113 VAL n 1 114 ALA n 1 115 THR n 1 116 LYS n 1 117 LEU n 1 118 SER n 1 119 GLN n 1 120 HIS n 1 121 ASP n 1 122 LEU n 1 123 ASP n 1 124 ILE n 1 125 THR n 1 126 ALA n 1 127 PHE n 1 128 GLY n 1 129 HIS n 1 130 PRO n 1 131 TYR n 1 132 GLY n 1 133 TYR n 1 134 VAL n 1 135 PRO n 1 136 GLU n 1 137 GLY n 1 138 SER n 1 139 VAL n 1 140 PHE n 1 141 VAL n 1 142 GLU n 1 143 ALA n 1 144 ASP n 1 145 LYS n 1 146 ASP n 1 147 MSE n 1 148 ILE n 1 149 GLU n 1 150 LEU n 1 151 SER n 1 152 LYS n 1 153 LYS n 1 154 VAL n 1 155 ALA n 1 156 LEU n 1 157 GLU n 1 158 MSE n 1 159 GLY n 1 160 LYS n 1 161 SER n 1 162 VAL n 1 163 GLN n 1 164 GLU n 1 165 GLY n 1 166 ILE n 1 167 ILE n 1 168 ALA n 1 169 THR n 1 170 GLY n 1 171 ASP n 1 172 GLN n 1 173 PHE n 1 174 VAL n 1 175 ALA n 1 176 ASN n 1 177 GLU n 1 178 GLU n 1 179 ARG n 1 180 LYS n 1 181 ASN n 1 182 TRP n 1 183 ILE n 1 184 GLY n 1 185 THR n 1 186 THR n 1 187 PHE n 1 188 GLY n 1 189 ALA n 1 190 ASP n 1 191 ALA n 1 192 LEU n 1 193 GLU n 1 194 MSE n 1 195 GLU n 1 196 GLY n 1 197 GLY n 1 198 SER n 1 199 VAL n 1 200 GLY n 1 201 VAL n 1 202 VAL n 1 203 CYS n 1 204 ASN n 1 205 ALA n 1 206 LEU n 1 207 ASN n 1 208 ILE n 1 209 PRO n 1 210 PHE n 1 211 PHE n 1 212 ILE n 1 213 LEU n 1 214 ARG n 1 215 SER n 1 216 ILE n 1 217 SER n 1 218 ASP n 1 219 ALA n 1 220 ALA n 1 221 ASP n 1 222 MSE n 1 223 ASP n 1 224 ALA n 1 225 SER n 1 226 PHE n 1 227 SER n 1 228 PHE n 1 229 ASP n 1 230 GLU n 1 231 PHE n 1 232 LEU n 1 233 GLU n 1 234 SER n 1 235 SER n 1 236 ALA n 1 237 LYS n 1 238 GLU n 1 239 SER n 1 240 ALA n 1 241 GLU n 1 242 PHE n 1 243 ILE n 1 244 MSE n 1 245 LYS n 1 246 MSE n 1 247 VAL n 1 248 ASP n 1 249 GLU n 1 250 LEU n 1 251 VAL n 1 252 ALA n 1 253 LEU n 1 254 PRO n 1 255 LEU n 1 256 GLN n 1 257 ASP n 1 258 ILE n 1 259 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Suden_1392 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 1251' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfurimonas denitrificans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 326298 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) CodonPlus RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSGC-His _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q30QR2_SULDN _struct_ref.pdbx_db_accession Q30QR2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KIAIMGAMPEEISPILEKIGSYKSTSYAGNKYYEATYQGVELVIAYSKIGKVFSALSAATMIEHFGATKLLFSGVAGAIS TNLKVGDLIVATKLSQHDLDITAFGHPYGYVPEGSVFVEADKDMIELSKKVALEMGKSVQEGIIATGDQFVANEERKNWI GTTFGADALEMEGGSVGVVCNALNIPFFILRSISDAADMDASFSFDEFLESSAKESAEFIMKMVDELVALPLQDIK ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4JWT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 259 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q30QR2 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 237 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 237 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JWT MSE A 1 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -21 1 1 4JWT HIS A 2 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -20 2 1 4JWT HIS A 3 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -19 3 1 4JWT HIS A 4 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -18 4 1 4JWT HIS A 5 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -17 5 1 4JWT HIS A 6 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -16 6 1 4JWT HIS A 7 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -15 7 1 4JWT SER A 8 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -14 8 1 4JWT SER A 9 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -13 9 1 4JWT GLY A 10 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -12 10 1 4JWT VAL A 11 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -11 11 1 4JWT ASP A 12 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -10 12 1 4JWT LEU A 13 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -9 13 1 4JWT GLY A 14 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -8 14 1 4JWT THR A 15 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -7 15 1 4JWT GLU A 16 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -6 16 1 4JWT ASN A 17 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -5 17 1 4JWT LEU A 18 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -4 18 1 4JWT TYR A 19 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -3 19 1 4JWT PHE A 20 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -2 20 1 4JWT GLN A 21 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' -1 21 1 4JWT SER A 22 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' 0 22 1 4JWT MSE A 23 ? UNP Q30QR2 ? ? 'EXPRESSION TAG' 1 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADE non-polymer . ADENINE ? 'C5 H5 N5' 135.127 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4JWT _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.54 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;Protein (20mM HEPES pH7.5, 150mM NaCl, 5% glycerol, and 5mM DTT); Reservoir (MCSG3 #84; 0.1 M Sodium Acetate:HCl pH 4.6, 2.0 M Sodium Formate ); Cryoprotection (33% Ethylene glycol), VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details MIRRORS _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-02-15 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97910 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 0.97910 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.05 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 26.75 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.109 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4JWT _reflns.B_iso_Wilson_estimate 33.0 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all ? _reflns.d_resolution_low 50.00 _reflns.pdbx_redundancy 22.8 _reflns.number_obs 26487 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.738 _reflns_shell.meanI_over_sigI_obs 5.42 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 23.1 _reflns_shell.number_unique_all 1283 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.0000 _refine.overall_SU_B 2.9870 _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4JWT _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.0810 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.aniso_B[3][3] -0.8300 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 0.2600 _refine.pdbx_overall_ESU_R 0.1290 _refine.ls_R_factor_obs 0.1783 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.correlation_coeff_Fo_to_Fc 0.9600 _refine.ls_number_reflns_R_free 1314 _refine.correlation_coeff_Fo_to_Fc_free 0.9570 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 99.8600 _refine.ls_R_factor_R_work 0.1775 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.0500 _refine.pdbx_overall_ESU_R_Free 0.1150 _refine.B_iso_min 20.880 _refine.occupancy_min 0.500 _refine.B_iso_mean 38.1574 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] 0.2600 _refine.B_iso_max 113.730 _refine.ls_d_res_low 43.5500 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.aniso_B[1][2] 0.2600 _refine.ls_R_factor_R_free 0.1929 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 26403 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY. AUTHORS NOTE AN ELECTRON DENSITY FEATURE JUST BELOW ADENINE, WHICH COULD NOT BE SATISFACTORILY EXPLAINED WITH BUFFER OR CRYSTALLIZATION COMPONENTS. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1851 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 2016 _refine_hist.d_res_high 2.0500 _refine_hist.d_res_low 43.5500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1941 0.009 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1860 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2620 1.285 1.998 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4311 0.718 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 256 5.912 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 76 32.045 25.921 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 307 12.816 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 2 12.282 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 297 0.074 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2188 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 407 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.0520 _refine_ls_shell.d_res_low 2.1050 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.9000 _refine_ls_shell.number_reflns_R_work 1797 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2250 _refine_ls_shell.R_factor_R_free 0.2570 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1882 _refine_ls_shell.number_reflns_obs 1797 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4JWT _struct.title ;Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Sulfurimonas denitrificans DSM 1251 (Target NYSGRC-029304 ) ; _struct.pdbx_descriptor 'Methylthioadenosine nucleosidase (E.C.3.2.2.16)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Sulfurimonas denitrificans, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, adenine, Structural genomics, NYSGRC, New York Structural Genomics Research Consortium, PSI-Biology, HYDROLASE ; _struct_keywords.entry_id 4JWT # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? TYR A 19 ? THR A -7 TYR A -3 5 ? 5 HELX_P HELX_P2 2 MSE A 31 ? GLY A 43 ? MSE A 9 GLY A 21 1 ? 13 HELX_P HELX_P3 3 GLY A 73 ? HIS A 87 ? GLY A 51 HIS A 65 1 ? 15 HELX_P HELX_P4 4 ILE A 124 ? GLY A 128 ? ILE A 102 GLY A 106 5 ? 5 HELX_P HELX_P5 5 ASP A 144 ? GLY A 159 ? ASP A 122 GLY A 137 1 ? 16 HELX_P HELX_P6 6 ASN A 176 ? GLY A 188 ? ASN A 154 GLY A 166 1 ? 13 HELX_P HELX_P7 7 GLU A 195 ? LEU A 206 ? GLU A 173 LEU A 184 1 ? 12 HELX_P HELX_P8 8 ASP A 223 ? LEU A 253 ? ASP A 201 LEU A 231 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 22 C ? ? ? 1_555 A MSE 23 N ? ? A SER 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A MSE 23 C ? ? ? 1_555 A LYS 24 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A ILE 27 C ? ? ? 1_555 A MSE 28 N ? ? A ILE 5 A MSE 6 1_555 ? ? ? ? ? ? ? 1.322 ? covale4 covale ? ? A MSE 28 C ? ? ? 1_555 A GLY 29 N ? ? A MSE 6 A GLY 7 1_555 ? ? ? ? ? ? ? 1.326 ? covale5 covale ? ? A ALA 30 C ? ? ? 1_555 A MSE 31 N ? ? A ALA 8 A MSE 9 1_555 ? ? ? ? ? ? ? 1.337 ? covale6 covale ? ? A MSE 31 C ? ? ? 1_555 A PRO 32 N ? ? A MSE 9 A PRO 10 1_555 ? ? ? ? ? ? ? 1.347 ? covale7 covale ? ? A THR 83 C ? ? ? 1_555 A MSE 84 N ? ? A THR 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.324 ? covale8 covale ? ? A MSE 84 C ? ? ? 1_555 A ILE 85 N ? ? A MSE 62 A ILE 63 1_555 ? ? ? ? ? ? ? 1.337 ? covale9 covale ? ? A ASP 146 C ? ? ? 1_555 A MSE 147 N ? ? A ASP 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.333 ? covale10 covale ? ? A MSE 147 C ? ? ? 1_555 A ILE 148 N ? ? A MSE 125 A ILE 126 1_555 ? ? ? ? ? ? ? 1.322 ? covale11 covale ? ? A GLU 157 C ? ? ? 1_555 A MSE 158 N ? ? A GLU 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.328 ? covale12 covale ? ? A MSE 158 C ? ? ? 1_555 A GLY 159 N ? ? A MSE 136 A GLY 137 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? A GLU 193 C ? ? ? 1_555 A MSE 194 N ? ? A GLU 171 A MSE 172 1_555 ? ? ? ? ? ? ? 1.321 ? covale14 covale ? ? A MSE 194 C ? ? ? 1_555 A GLU 195 N ? ? A MSE 172 A GLU 173 1_555 ? ? ? ? ? ? ? 1.342 ? covale15 covale ? ? A ASP 221 C ? ? ? 1_555 A MSE 222 N ? ? A ASP 199 A MSE 200 1_555 ? ? ? ? ? ? ? 1.333 ? covale16 covale ? ? A MSE 222 C ? ? ? 1_555 A ASP 223 N ? ? A MSE 200 A ASP 201 1_555 ? ? ? ? ? ? ? 1.328 ? covale17 covale ? ? A ILE 243 C ? ? ? 1_555 A MSE 244 N ? ? A ILE 221 A MSE 222 1_555 ? ? ? ? ? ? ? 1.328 ? covale18 covale ? ? A MSE 244 C ? ? ? 1_555 A LYS 245 N ? ? A MSE 222 A LYS 223 1_555 ? ? ? ? ? ? ? 1.331 ? covale19 covale ? ? A LYS 245 C ? ? ? 1_555 A MSE 246 N ? ? A LYS 223 A MSE 224 1_555 ? ? ? ? ? ? ? 1.333 ? covale20 covale ? ? A MSE 246 C ? ? ? 1_555 A VAL 247 N ? ? A MSE 224 A VAL 225 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 46 ? TYR A 50 ? LYS A 24 TYR A 28 A 2 ASN A 53 ? TYR A 60 ? ASN A 31 TYR A 38 A 3 VAL A 63 ? TYR A 69 ? VAL A 41 TYR A 47 A 4 LYS A 24 ? GLY A 29 ? LYS A 2 GLY A 7 A 5 LYS A 92 ? ALA A 101 ? LYS A 70 ALA A 79 A 6 ALA A 191 ? GLU A 193 ? ALA A 169 GLU A 171 A 7 VAL A 162 ? THR A 169 ? VAL A 140 THR A 147 A 8 LEU A 111 ? GLN A 119 ? LEU A 89 GLN A 97 A 9 VAL A 141 ? GLU A 142 ? VAL A 119 GLU A 120 B 1 LYS A 46 ? TYR A 50 ? LYS A 24 TYR A 28 B 2 ASN A 53 ? TYR A 60 ? ASN A 31 TYR A 38 B 3 VAL A 63 ? TYR A 69 ? VAL A 41 TYR A 47 B 4 LYS A 24 ? GLY A 29 ? LYS A 2 GLY A 7 B 5 LYS A 92 ? ALA A 101 ? LYS A 70 ALA A 79 B 6 PHE A 210 ? ASP A 218 ? PHE A 188 ASP A 196 B 7 LEU A 111 ? GLN A 119 ? LEU A 89 GLN A 97 B 8 VAL A 141 ? GLU A 142 ? VAL A 119 GLU A 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 48 ? N THR A 26 O TYR A 55 ? O TYR A 33 A 2 3 N TYR A 56 ? N TYR A 34 O ILE A 67 ? O ILE A 45 A 3 4 O VAL A 66 ? O VAL A 44 N ILE A 27 ? N ILE A 5 A 4 5 N ALA A 26 ? N ALA A 4 O LEU A 94 ? O LEU A 72 A 5 6 N GLY A 100 ? N GLY A 78 O LEU A 192 ? O LEU A 170 A 6 7 O ALA A 191 ? O ALA A 169 N ALA A 168 ? N ALA A 146 A 7 8 O THR A 169 ? O THR A 147 N SER A 118 ? N SER A 96 A 8 9 N LEU A 117 ? N LEU A 95 O VAL A 141 ? O VAL A 119 B 1 2 N THR A 48 ? N THR A 26 O TYR A 55 ? O TYR A 33 B 2 3 N TYR A 56 ? N TYR A 34 O ILE A 67 ? O ILE A 45 B 3 4 O VAL A 66 ? O VAL A 44 N ILE A 27 ? N ILE A 5 B 4 5 N ALA A 26 ? N ALA A 4 O LEU A 94 ? O LEU A 72 B 5 6 N ALA A 99 ? N ALA A 77 O SER A 217 ? O SER A 195 B 6 7 O ARG A 214 ? O ARG A 192 N ILE A 112 ? N ILE A 90 B 7 8 N LEU A 117 ? N LEU A 95 O VAL A 141 ? O VAL A 119 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 301' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 302' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 303' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 304' AC5 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE ADE A 305' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TYR A 50 ? TYR A 28 . ? 1_555 ? 2 AC1 4 ALA A 51 ? ALA A 29 . ? 1_555 ? 3 AC1 4 GLY A 52 ? GLY A 30 . ? 1_555 ? 4 AC1 4 ASN A 207 ? ASN A 185 . ? 10_665 ? 5 AC2 5 GLU A 142 ? GLU A 120 . ? 1_555 ? 6 AC2 5 ALA A 143 ? ALA A 121 . ? 1_555 ? 7 AC2 5 ASP A 144 ? ASP A 122 . ? 1_555 ? 8 AC2 5 LYS A 145 ? LYS A 123 . ? 1_555 ? 9 AC2 5 HOH G . ? HOH A 443 . ? 1_555 ? 10 AC3 4 TYR A 19 ? TYR A -3 . ? 1_555 ? 11 AC3 4 PHE A 127 ? PHE A 105 . ? 5_555 ? 12 AC3 4 HOH G . ? HOH A 407 . ? 9_655 ? 13 AC3 4 HOH G . ? HOH A 511 . ? 1_555 ? 14 AC4 5 ASN A 204 ? ASN A 182 . ? 1_555 ? 15 AC4 5 ASN A 207 ? ASN A 185 . ? 1_555 ? 16 AC4 5 HOH G . ? HOH A 487 . ? 1_555 ? 17 AC4 5 HOH G . ? HOH A 514 . ? 1_555 ? 18 AC4 5 HOH G . ? HOH A 515 . ? 1_555 ? 19 AC5 12 VAL A 98 ? VAL A 76 . ? 1_555 ? 20 AC5 12 ALA A 99 ? ALA A 77 . ? 1_555 ? 21 AC5 12 GLY A 100 ? GLY A 78 . ? 1_555 ? 22 AC5 12 GLN A 172 ? GLN A 150 . ? 1_555 ? 23 AC5 12 PHE A 173 ? PHE A 151 . ? 1_555 ? 24 AC5 12 VAL A 174 ? VAL A 152 . ? 1_555 ? 25 AC5 12 LEU A 192 ? LEU A 170 . ? 1_555 ? 26 AC5 12 GLU A 193 ? GLU A 171 . ? 1_555 ? 27 AC5 12 MSE A 194 ? MSE A 172 . ? 1_555 ? 28 AC5 12 SER A 217 ? SER A 195 . ? 1_555 ? 29 AC5 12 ASP A 218 ? ASP A 196 . ? 1_555 ? 30 AC5 12 ALA A 220 ? ALA A 198 . ? 1_555 ? # _atom_sites.entry_id 4JWT _atom_sites.fract_transf_matrix[1][1] 0.012887 _atom_sites.fract_transf_matrix[1][2] 0.007440 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014881 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004378 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -21 ? ? ? A . n A 1 2 HIS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 SER 8 -14 ? ? ? A . n A 1 9 SER 9 -13 ? ? ? A . n A 1 10 GLY 10 -12 -12 GLY GLY A . n A 1 11 VAL 11 -11 -11 VAL VAL A . n A 1 12 ASP 12 -10 -10 ASP ASP A . n A 1 13 LEU 13 -9 -9 LEU LEU A . n A 1 14 GLY 14 -8 -8 GLY GLY A . n A 1 15 THR 15 -7 -7 THR THR A . n A 1 16 GLU 16 -6 -6 GLU GLU A . n A 1 17 ASN 17 -5 -5 ASN ASN A . n A 1 18 LEU 18 -4 -4 LEU LEU A . n A 1 19 TYR 19 -3 -3 TYR TYR A . n A 1 20 PHE 20 -2 -2 PHE PHE A . n A 1 21 GLN 21 -1 -1 GLN GLN A . n A 1 22 SER 22 0 0 SER SER A . n A 1 23 MSE 23 1 1 MSE MSE A . n A 1 24 LYS 24 2 2 LYS LYS A . n A 1 25 ILE 25 3 3 ILE ILE A . n A 1 26 ALA 26 4 4 ALA ALA A . n A 1 27 ILE 27 5 5 ILE ILE A . n A 1 28 MSE 28 6 6 MSE MSE A . n A 1 29 GLY 29 7 7 GLY GLY A . n A 1 30 ALA 30 8 8 ALA ALA A . n A 1 31 MSE 31 9 9 MSE MSE A . n A 1 32 PRO 32 10 10 PRO PRO A . n A 1 33 GLU 33 11 11 GLU GLU A . n A 1 34 GLU 34 12 12 GLU GLU A . n A 1 35 ILE 35 13 13 ILE ILE A . n A 1 36 SER 36 14 14 SER SER A . n A 1 37 PRO 37 15 15 PRO PRO A . n A 1 38 ILE 38 16 16 ILE ILE A . n A 1 39 LEU 39 17 17 LEU LEU A . n A 1 40 GLU 40 18 18 GLU GLU A . n A 1 41 LYS 41 19 19 LYS LYS A . n A 1 42 ILE 42 20 20 ILE ILE A . n A 1 43 GLY 43 21 21 GLY GLY A . n A 1 44 SER 44 22 22 SER SER A . n A 1 45 TYR 45 23 23 TYR TYR A . n A 1 46 LYS 46 24 24 LYS LYS A . n A 1 47 SER 47 25 25 SER SER A . n A 1 48 THR 48 26 26 THR THR A . n A 1 49 SER 49 27 27 SER SER A . n A 1 50 TYR 50 28 28 TYR TYR A . n A 1 51 ALA 51 29 29 ALA ALA A . n A 1 52 GLY 52 30 30 GLY GLY A . n A 1 53 ASN 53 31 31 ASN ASN A . n A 1 54 LYS 54 32 32 LYS LYS A . n A 1 55 TYR 55 33 33 TYR TYR A . n A 1 56 TYR 56 34 34 TYR TYR A . n A 1 57 GLU 57 35 35 GLU GLU A . n A 1 58 ALA 58 36 36 ALA ALA A . n A 1 59 THR 59 37 37 THR THR A . n A 1 60 TYR 60 38 38 TYR TYR A . n A 1 61 GLN 61 39 39 GLN GLN A . n A 1 62 GLY 62 40 40 GLY GLY A . n A 1 63 VAL 63 41 41 VAL VAL A . n A 1 64 GLU 64 42 42 GLU GLU A . n A 1 65 LEU 65 43 43 LEU LEU A . n A 1 66 VAL 66 44 44 VAL VAL A . n A 1 67 ILE 67 45 45 ILE ILE A . n A 1 68 ALA 68 46 46 ALA ALA A . n A 1 69 TYR 69 47 47 TYR TYR A . n A 1 70 SER 70 48 48 SER SER A . n A 1 71 LYS 71 49 49 LYS LYS A . n A 1 72 ILE 72 50 50 ILE ILE A . n A 1 73 GLY 73 51 51 GLY GLY A . n A 1 74 LYS 74 52 52 LYS LYS A . n A 1 75 VAL 75 53 53 VAL VAL A . n A 1 76 PHE 76 54 54 PHE PHE A . n A 1 77 SER 77 55 55 SER SER A . n A 1 78 ALA 78 56 56 ALA ALA A . n A 1 79 LEU 79 57 57 LEU LEU A . n A 1 80 SER 80 58 58 SER SER A . n A 1 81 ALA 81 59 59 ALA ALA A . n A 1 82 ALA 82 60 60 ALA ALA A . n A 1 83 THR 83 61 61 THR THR A . n A 1 84 MSE 84 62 62 MSE MSE A . n A 1 85 ILE 85 63 63 ILE ILE A . n A 1 86 GLU 86 64 64 GLU GLU A . n A 1 87 HIS 87 65 65 HIS HIS A . n A 1 88 PHE 88 66 66 PHE PHE A . n A 1 89 GLY 89 67 67 GLY GLY A . n A 1 90 ALA 90 68 68 ALA ALA A . n A 1 91 THR 91 69 69 THR THR A . n A 1 92 LYS 92 70 70 LYS LYS A . n A 1 93 LEU 93 71 71 LEU LEU A . n A 1 94 LEU 94 72 72 LEU LEU A . n A 1 95 PHE 95 73 73 PHE PHE A . n A 1 96 SER 96 74 74 SER SER A . n A 1 97 GLY 97 75 75 GLY GLY A . n A 1 98 VAL 98 76 76 VAL VAL A . n A 1 99 ALA 99 77 77 ALA ALA A . n A 1 100 GLY 100 78 78 GLY GLY A . n A 1 101 ALA 101 79 79 ALA ALA A . n A 1 102 ILE 102 80 80 ILE ILE A . n A 1 103 SER 103 81 81 SER SER A . n A 1 104 THR 104 82 82 THR THR A . n A 1 105 ASN 105 83 83 ASN ASN A . n A 1 106 LEU 106 84 84 LEU LEU A . n A 1 107 LYS 107 85 85 LYS LYS A . n A 1 108 VAL 108 86 86 VAL VAL A . n A 1 109 GLY 109 87 87 GLY GLY A . n A 1 110 ASP 110 88 88 ASP ASP A . n A 1 111 LEU 111 89 89 LEU LEU A . n A 1 112 ILE 112 90 90 ILE ILE A . n A 1 113 VAL 113 91 91 VAL VAL A . n A 1 114 ALA 114 92 92 ALA ALA A . n A 1 115 THR 115 93 93 THR THR A . n A 1 116 LYS 116 94 94 LYS LYS A . n A 1 117 LEU 117 95 95 LEU LEU A . n A 1 118 SER 118 96 96 SER SER A . n A 1 119 GLN 119 97 97 GLN GLN A . n A 1 120 HIS 120 98 98 HIS HIS A . n A 1 121 ASP 121 99 99 ASP ASP A . n A 1 122 LEU 122 100 100 LEU LEU A . n A 1 123 ASP 123 101 101 ASP ASP A . n A 1 124 ILE 124 102 102 ILE ILE A . n A 1 125 THR 125 103 103 THR THR A . n A 1 126 ALA 126 104 104 ALA ALA A . n A 1 127 PHE 127 105 105 PHE PHE A . n A 1 128 GLY 128 106 106 GLY GLY A . n A 1 129 HIS 129 107 107 HIS HIS A . n A 1 130 PRO 130 108 108 PRO PRO A . n A 1 131 TYR 131 109 109 TYR TYR A . n A 1 132 GLY 132 110 110 GLY GLY A . n A 1 133 TYR 133 111 111 TYR TYR A . n A 1 134 VAL 134 112 112 VAL VAL A . n A 1 135 PRO 135 113 113 PRO PRO A . n A 1 136 GLU 136 114 114 GLU GLU A . n A 1 137 GLY 137 115 115 GLY GLY A . n A 1 138 SER 138 116 116 SER SER A . n A 1 139 VAL 139 117 117 VAL VAL A . n A 1 140 PHE 140 118 118 PHE PHE A . n A 1 141 VAL 141 119 119 VAL VAL A . n A 1 142 GLU 142 120 120 GLU GLU A . n A 1 143 ALA 143 121 121 ALA ALA A . n A 1 144 ASP 144 122 122 ASP ASP A . n A 1 145 LYS 145 123 123 LYS LYS A . n A 1 146 ASP 146 124 124 ASP ASP A . n A 1 147 MSE 147 125 125 MSE MSE A . n A 1 148 ILE 148 126 126 ILE ILE A . n A 1 149 GLU 149 127 127 GLU GLU A . n A 1 150 LEU 150 128 128 LEU LEU A . n A 1 151 SER 151 129 129 SER SER A . n A 1 152 LYS 152 130 130 LYS LYS A . n A 1 153 LYS 153 131 131 LYS LYS A . n A 1 154 VAL 154 132 132 VAL VAL A . n A 1 155 ALA 155 133 133 ALA ALA A . n A 1 156 LEU 156 134 134 LEU LEU A . n A 1 157 GLU 157 135 135 GLU GLU A . n A 1 158 MSE 158 136 136 MSE MSE A . n A 1 159 GLY 159 137 137 GLY GLY A . n A 1 160 LYS 160 138 138 LYS LYS A . n A 1 161 SER 161 139 139 SER SER A . n A 1 162 VAL 162 140 140 VAL VAL A . n A 1 163 GLN 163 141 141 GLN GLN A . n A 1 164 GLU 164 142 142 GLU GLU A . n A 1 165 GLY 165 143 143 GLY GLY A . n A 1 166 ILE 166 144 144 ILE ILE A . n A 1 167 ILE 167 145 145 ILE ILE A . n A 1 168 ALA 168 146 146 ALA ALA A . n A 1 169 THR 169 147 147 THR THR A . n A 1 170 GLY 170 148 148 GLY GLY A . n A 1 171 ASP 171 149 149 ASP ASP A . n A 1 172 GLN 172 150 150 GLN GLN A . n A 1 173 PHE 173 151 151 PHE PHE A . n A 1 174 VAL 174 152 152 VAL VAL A . n A 1 175 ALA 175 153 153 ALA ALA A . n A 1 176 ASN 176 154 154 ASN ASN A . n A 1 177 GLU 177 155 155 GLU GLU A . n A 1 178 GLU 178 156 156 GLU GLU A . n A 1 179 ARG 179 157 157 ARG ARG A . n A 1 180 LYS 180 158 158 LYS LYS A . n A 1 181 ASN 181 159 159 ASN ASN A . n A 1 182 TRP 182 160 160 TRP TRP A . n A 1 183 ILE 183 161 161 ILE ILE A . n A 1 184 GLY 184 162 162 GLY GLY A . n A 1 185 THR 185 163 163 THR THR A . n A 1 186 THR 186 164 164 THR THR A . n A 1 187 PHE 187 165 165 PHE PHE A . n A 1 188 GLY 188 166 166 GLY GLY A . n A 1 189 ALA 189 167 167 ALA ALA A . n A 1 190 ASP 190 168 168 ASP ASP A . n A 1 191 ALA 191 169 169 ALA ALA A . n A 1 192 LEU 192 170 170 LEU LEU A . n A 1 193 GLU 193 171 171 GLU GLU A . n A 1 194 MSE 194 172 172 MSE MSE A . n A 1 195 GLU 195 173 173 GLU GLU A . n A 1 196 GLY 196 174 174 GLY GLY A . n A 1 197 GLY 197 175 175 GLY GLY A . n A 1 198 SER 198 176 176 SER SER A . n A 1 199 VAL 199 177 177 VAL VAL A . n A 1 200 GLY 200 178 178 GLY GLY A . n A 1 201 VAL 201 179 179 VAL VAL A . n A 1 202 VAL 202 180 180 VAL VAL A . n A 1 203 CYS 203 181 181 CYS CYS A . n A 1 204 ASN 204 182 182 ASN ASN A . n A 1 205 ALA 205 183 183 ALA ALA A . n A 1 206 LEU 206 184 184 LEU LEU A . n A 1 207 ASN 207 185 185 ASN ASN A . n A 1 208 ILE 208 186 186 ILE ILE A . n A 1 209 PRO 209 187 187 PRO PRO A . n A 1 210 PHE 210 188 188 PHE PHE A . n A 1 211 PHE 211 189 189 PHE PHE A . n A 1 212 ILE 212 190 190 ILE ILE A . n A 1 213 LEU 213 191 191 LEU LEU A . n A 1 214 ARG 214 192 192 ARG ARG A . n A 1 215 SER 215 193 193 SER SER A . n A 1 216 ILE 216 194 194 ILE ILE A . n A 1 217 SER 217 195 195 SER SER A . n A 1 218 ASP 218 196 196 ASP ASP A . n A 1 219 ALA 219 197 197 ALA ALA A . n A 1 220 ALA 220 198 198 ALA ALA A . n A 1 221 ASP 221 199 199 ASP ASP A . n A 1 222 MSE 222 200 200 MSE MSE A . n A 1 223 ASP 223 201 201 ASP ASP A . n A 1 224 ALA 224 202 202 ALA ALA A . n A 1 225 SER 225 203 203 SER SER A . n A 1 226 PHE 226 204 204 PHE PHE A . n A 1 227 SER 227 205 205 SER SER A . n A 1 228 PHE 228 206 206 PHE PHE A . n A 1 229 ASP 229 207 207 ASP ASP A . n A 1 230 GLU 230 208 208 GLU GLU A . n A 1 231 PHE 231 209 209 PHE PHE A . n A 1 232 LEU 232 210 210 LEU LEU A . n A 1 233 GLU 233 211 211 GLU GLU A . n A 1 234 SER 234 212 212 SER SER A . n A 1 235 SER 235 213 213 SER SER A . n A 1 236 ALA 236 214 214 ALA ALA A . n A 1 237 LYS 237 215 215 LYS LYS A . n A 1 238 GLU 238 216 216 GLU GLU A . n A 1 239 SER 239 217 217 SER SER A . n A 1 240 ALA 240 218 218 ALA ALA A . n A 1 241 GLU 241 219 219 GLU GLU A . n A 1 242 PHE 242 220 220 PHE PHE A . n A 1 243 ILE 243 221 221 ILE ILE A . n A 1 244 MSE 244 222 222 MSE MSE A . n A 1 245 LYS 245 223 223 LYS LYS A . n A 1 246 MSE 246 224 224 MSE MSE A . n A 1 247 VAL 247 225 225 VAL VAL A . n A 1 248 ASP 248 226 226 ASP ASP A . n A 1 249 GLU 249 227 227 GLU GLU A . n A 1 250 LEU 250 228 228 LEU LEU A . n A 1 251 VAL 251 229 229 VAL VAL A . n A 1 252 ALA 252 230 230 ALA ALA A . n A 1 253 LEU 253 231 231 LEU LEU A . n A 1 254 PRO 254 232 232 PRO PRO A . n A 1 255 LEU 255 233 ? ? ? A . n A 1 256 GLN 256 234 ? ? ? A . n A 1 257 ASP 257 235 ? ? ? A . n A 1 258 ILE 258 236 ? ? ? A . n A 1 259 LYS 259 237 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 301 1 EDO EDO A . C 2 EDO 1 302 2 EDO EDO A . D 2 EDO 1 303 3 EDO EDO A . E 2 EDO 1 304 4 EDO EDO A . F 3 ADE 1 305 1 ADE ADE A . G 4 HOH 1 401 1 HOH HOH A . G 4 HOH 2 402 2 HOH HOH A . G 4 HOH 3 403 3 HOH HOH A . G 4 HOH 4 404 4 HOH HOH A . G 4 HOH 5 405 5 HOH HOH A . G 4 HOH 6 406 6 HOH HOH A . G 4 HOH 7 407 7 HOH HOH A . G 4 HOH 8 408 8 HOH HOH A . G 4 HOH 9 409 9 HOH HOH A . G 4 HOH 10 410 10 HOH HOH A . G 4 HOH 11 411 11 HOH HOH A . G 4 HOH 12 412 12 HOH HOH A . G 4 HOH 13 413 13 HOH HOH A . G 4 HOH 14 414 14 HOH HOH A . G 4 HOH 15 415 15 HOH HOH A . G 4 HOH 16 416 16 HOH HOH A . G 4 HOH 17 417 17 HOH HOH A . G 4 HOH 18 418 18 HOH HOH A . G 4 HOH 19 419 19 HOH HOH A . G 4 HOH 20 420 20 HOH HOH A . G 4 HOH 21 421 21 HOH HOH A . G 4 HOH 22 422 22 HOH HOH A . G 4 HOH 23 423 23 HOH HOH A . G 4 HOH 24 424 24 HOH HOH A . G 4 HOH 25 425 25 HOH HOH A . G 4 HOH 26 426 26 HOH HOH A . G 4 HOH 27 427 27 HOH HOH A . G 4 HOH 28 428 28 HOH HOH A . G 4 HOH 29 429 29 HOH HOH A . G 4 HOH 30 430 30 HOH HOH A . G 4 HOH 31 431 31 HOH HOH A . G 4 HOH 32 432 32 HOH HOH A . G 4 HOH 33 433 33 HOH HOH A . G 4 HOH 34 434 34 HOH HOH A . G 4 HOH 35 435 35 HOH HOH A . G 4 HOH 36 436 36 HOH HOH A . G 4 HOH 37 437 37 HOH HOH A . G 4 HOH 38 438 38 HOH HOH A . G 4 HOH 39 439 39 HOH HOH A . G 4 HOH 40 440 40 HOH HOH A . G 4 HOH 41 441 41 HOH HOH A . G 4 HOH 42 442 42 HOH HOH A . G 4 HOH 43 443 43 HOH HOH A . G 4 HOH 44 444 44 HOH HOH A . G 4 HOH 45 445 45 HOH HOH A . G 4 HOH 46 446 46 HOH HOH A . G 4 HOH 47 447 47 HOH HOH A . G 4 HOH 48 448 48 HOH HOH A . G 4 HOH 49 449 49 HOH HOH A . G 4 HOH 50 450 50 HOH HOH A . G 4 HOH 51 451 51 HOH HOH A . G 4 HOH 52 452 52 HOH HOH A . G 4 HOH 53 453 53 HOH HOH A . G 4 HOH 54 454 54 HOH HOH A . G 4 HOH 55 455 55 HOH HOH A . G 4 HOH 56 456 56 HOH HOH A . G 4 HOH 57 457 57 HOH HOH A . G 4 HOH 58 458 58 HOH HOH A . G 4 HOH 59 459 59 HOH HOH A . G 4 HOH 60 460 60 HOH HOH A . G 4 HOH 61 461 61 HOH HOH A . G 4 HOH 62 462 62 HOH HOH A . G 4 HOH 63 463 63 HOH HOH A . G 4 HOH 64 464 64 HOH HOH A . G 4 HOH 65 465 65 HOH HOH A . G 4 HOH 66 466 66 HOH HOH A . G 4 HOH 67 467 67 HOH HOH A . G 4 HOH 68 468 68 HOH HOH A . G 4 HOH 69 469 69 HOH HOH A . G 4 HOH 70 470 70 HOH HOH A . G 4 HOH 71 471 71 HOH HOH A . G 4 HOH 72 472 72 HOH HOH A . G 4 HOH 73 473 73 HOH HOH A . G 4 HOH 74 474 74 HOH HOH A . G 4 HOH 75 475 75 HOH HOH A . G 4 HOH 76 476 76 HOH HOH A . G 4 HOH 77 477 77 HOH HOH A . G 4 HOH 78 478 78 HOH HOH A . G 4 HOH 79 479 79 HOH HOH A . G 4 HOH 80 480 80 HOH HOH A . G 4 HOH 81 481 81 HOH HOH A . G 4 HOH 82 482 82 HOH HOH A . G 4 HOH 83 483 83 HOH HOH A . G 4 HOH 84 484 84 HOH HOH A . G 4 HOH 85 485 85 HOH HOH A . G 4 HOH 86 486 86 HOH HOH A . G 4 HOH 87 487 87 HOH HOH A . G 4 HOH 88 488 88 HOH HOH A . G 4 HOH 89 489 89 HOH HOH A . G 4 HOH 90 490 90 HOH HOH A . G 4 HOH 91 491 91 HOH HOH A . G 4 HOH 92 492 92 HOH HOH A . G 4 HOH 93 493 93 HOH HOH A . G 4 HOH 94 494 94 HOH HOH A . G 4 HOH 95 495 95 HOH HOH A . G 4 HOH 96 496 96 HOH HOH A . G 4 HOH 97 497 97 HOH HOH A . G 4 HOH 98 498 98 HOH HOH A . G 4 HOH 99 499 99 HOH HOH A . G 4 HOH 100 500 100 HOH HOH A . G 4 HOH 101 501 101 HOH HOH A . G 4 HOH 102 502 102 HOH HOH A . G 4 HOH 103 503 103 HOH HOH A . G 4 HOH 104 504 104 HOH HOH A . G 4 HOH 105 505 105 HOH HOH A . G 4 HOH 106 506 106 HOH HOH A . G 4 HOH 107 507 107 HOH HOH A . G 4 HOH 108 508 108 HOH HOH A . G 4 HOH 109 509 109 HOH HOH A . G 4 HOH 110 510 110 HOH HOH A . G 4 HOH 111 511 111 HOH HOH A . G 4 HOH 112 512 112 HOH HOH A . G 4 HOH 113 513 113 HOH HOH A . G 4 HOH 114 514 114 HOH HOH A . G 4 HOH 115 515 115 HOH HOH A . G 4 HOH 116 516 116 HOH HOH A . G 4 HOH 117 517 117 HOH HOH A . G 4 HOH 118 518 118 HOH HOH A . G 4 HOH 119 519 119 HOH HOH A . G 4 HOH 120 520 120 HOH HOH A . G 4 HOH 121 521 121 HOH HOH A . G 4 HOH 122 522 122 HOH HOH A . G 4 HOH 123 523 123 HOH HOH A . G 4 HOH 124 524 124 HOH HOH A . G 4 HOH 125 525 125 HOH HOH A . G 4 HOH 126 526 126 HOH HOH A . G 4 HOH 127 527 127 HOH HOH A . G 4 HOH 128 528 128 HOH HOH A . G 4 HOH 129 529 129 HOH HOH A . G 4 HOH 130 530 130 HOH HOH A . G 4 HOH 131 531 131 HOH HOH A . G 4 HOH 132 532 132 HOH HOH A . G 4 HOH 133 533 133 HOH HOH A . G 4 HOH 134 534 134 HOH HOH A . G 4 HOH 135 535 135 HOH HOH A . G 4 HOH 136 536 136 HOH HOH A . G 4 HOH 137 537 137 HOH HOH A . G 4 HOH 138 538 138 HOH HOH A . G 4 HOH 139 539 139 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 23 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 28 A MSE 6 ? MET SELENOMETHIONINE 3 A MSE 31 A MSE 9 ? MET SELENOMETHIONINE 4 A MSE 84 A MSE 62 ? MET SELENOMETHIONINE 5 A MSE 147 A MSE 125 ? MET SELENOMETHIONINE 6 A MSE 158 A MSE 136 ? MET SELENOMETHIONINE 7 A MSE 194 A MSE 172 ? MET SELENOMETHIONINE 8 A MSE 222 A MSE 200 ? MET SELENOMETHIONINE 9 A MSE 244 A MSE 222 ? MET SELENOMETHIONINE 10 A MSE 246 A MSE 224 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5210 ? 1 MORE 0 ? 1 'SSA (A^2)' 19920 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 38.7990000000 -0.8660254038 -0.5000000000 0.0000000000 67.2018392829 0.0000000000 0.0000000000 -1.0000000000 38.0708333333 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 457 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-08 2 'Structure model' 1 1 2013-11-27 3 'Structure model' 1 2 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.7.0029 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 CBASS . ? ? ? ? 'data collection' ? ? ? 4 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 SHELX C ? ? ? ? phasing ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 SHELXE . ? ? ? ? 'model building' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 49 ? ? 87.62 163.04 2 1 ASP A 149 ? ? -87.28 33.58 3 1 ASN A 154 ? ? -162.96 114.66 4 1 GLU A 173 ? ? -138.35 -30.75 5 1 ASP A 199 ? ? -122.90 -161.65 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -21 ? A MSE 1 2 1 Y 1 A HIS -20 ? A HIS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A SER -14 ? A SER 8 9 1 Y 1 A SER -13 ? A SER 9 10 1 Y 1 A LEU 233 ? A LEU 255 11 1 Y 1 A GLN 234 ? A GLN 256 12 1 Y 1 A ASP 235 ? A ASP 257 13 1 Y 1 A ILE 236 ? A ILE 258 14 1 Y 1 A LYS 237 ? A LYS 259 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 ADENINE ADE 4 water HOH #