data_4JZT # _entry.id 4JZT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JZT pdb_00004jzt 10.2210/pdb4jzt/pdb RCSB RCSB078711 ? ? WWPDB D_1000078711 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-01 2 'Structure model' 1 1 2013-06-19 3 'Structure model' 1 2 2013-07-10 4 'Structure model' 1 3 2024-02-28 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4JZT _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-04-03 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4JZS . unspecified PDB 4JZU . unspecified PDB 4JZV . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Piton, J.' 1 'Larue, V.' 2 'Thillier, Y.' 3 'Dorleans, A.' 4 'Pellegrini, O.' 5 'Li de la Sierra-Gallay, I.' 6 'Vasseur, J.J.' 7 'Debart, F.' 8 'Tisne, C.' 9 'Condon, C.' 10 # _citation.id primary _citation.title 'Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 8858 _citation.page_last 8863 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23610407 _citation.pdbx_database_id_DOI 10.1073/pnas.1221510110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Piton, J.' 1 ? primary 'Larue, V.' 2 ? primary 'Thillier, Y.' 3 ? primary 'Dorleans, A.' 4 ? primary 'Pellegrini, O.' 5 ? primary 'Li de la Sierra-Gallay, I.' 6 ? primary 'Vasseur, J.J.' 7 ? primary 'Debart, F.' 8 ? primary 'Tisne, C.' 9 ? primary 'Condon, C.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'dGTP pyrophosphohydrolase' 20653.582 2 3.6.1.55 E68A ? ? 2 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 1 ? ? ? ? 3 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '8-oxo-dGTPase, 7,8-dihydro-8-oxoguanine-triphosphatase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMEC AEEAALRAVKEETGARVKSLKYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMK DSVLPISLKKLKESGWIE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMEC AEEAALRAVKEETGARVKSLKYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMK DSVLPISLKKLKESGWIE ; _entity_poly.pdbx_strand_id A,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-TRIPHOSPHATE" GTP 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 TYR n 1 23 GLU n 1 24 PHE n 1 25 LYS n 1 26 ASP n 1 27 TYR n 1 28 TYR n 1 29 GLN n 1 30 ASN n 1 31 THR n 1 32 VAL n 1 33 GLN n 1 34 LEU n 1 35 SER n 1 36 PHE n 1 37 ASP n 1 38 ASP n 1 39 GLN n 1 40 PRO n 1 41 PHE n 1 42 SER n 1 43 ASP n 1 44 SER n 1 45 PRO n 1 46 LYS n 1 47 HIS n 1 48 VAL n 1 49 TRP n 1 50 VAL n 1 51 ILE n 1 52 CYS n 1 53 ARG n 1 54 PHE n 1 55 GLY n 1 56 GLY n 1 57 LYS n 1 58 TRP n 1 59 LEU n 1 60 LEU n 1 61 THR n 1 62 GLU n 1 63 HIS n 1 64 GLU n 1 65 ASP n 1 66 ARG n 1 67 GLY n 1 68 TYR n 1 69 GLU n 1 70 PHE n 1 71 PRO n 1 72 GLY n 1 73 GLY n 1 74 LYS n 1 75 VAL n 1 76 GLU n 1 77 PRO n 1 78 MET n 1 79 GLU n 1 80 CYS n 1 81 ALA n 1 82 GLU n 1 83 GLU n 1 84 ALA n 1 85 ALA n 1 86 LEU n 1 87 ARG n 1 88 ALA n 1 89 VAL n 1 90 LYS n 1 91 GLU n 1 92 GLU n 1 93 THR n 1 94 GLY n 1 95 ALA n 1 96 ARG n 1 97 VAL n 1 98 LYS n 1 99 SER n 1 100 LEU n 1 101 LYS n 1 102 TYR n 1 103 LEU n 1 104 GLY n 1 105 GLN n 1 106 TYR n 1 107 LYS n 1 108 VAL n 1 109 LEU n 1 110 GLY n 1 111 LYS n 1 112 GLU n 1 113 LYS n 1 114 VAL n 1 115 ILE n 1 116 VAL n 1 117 LYS n 1 118 ASN n 1 119 ILE n 1 120 TYR n 1 121 PHE n 1 122 ALA n 1 123 ASP n 1 124 ILE n 1 125 GLU n 1 126 LYS n 1 127 LEU n 1 128 GLU n 1 129 LYS n 1 130 GLN n 1 131 ALA n 1 132 ASP n 1 133 TYR n 1 134 PHE n 1 135 GLU n 1 136 THR n 1 137 LYS n 1 138 GLY n 1 139 PRO n 1 140 VAL n 1 141 LEU n 1 142 PHE n 1 143 HIS n 1 144 GLU n 1 145 LEU n 1 146 PRO n 1 147 GLU n 1 148 ASN n 1 149 LEU n 1 150 SER n 1 151 ARG n 1 152 ASN n 1 153 LYS n 1 154 LYS n 1 155 PHE n 1 156 SER n 1 157 PHE n 1 158 ILE n 1 159 MET n 1 160 LYS n 1 161 ASP n 1 162 SER n 1 163 VAL n 1 164 LEU n 1 165 PRO n 1 166 ILE n 1 167 SER n 1 168 LEU n 1 169 LYS n 1 170 LYS n 1 171 LEU n 1 172 LYS n 1 173 GLU n 1 174 SER n 1 175 GLY n 1 176 TRP n 1 177 ILE n 1 178 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BSU30630, mutTA, ytkD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 TYR 22 2 2 TYR TYR A . n A 1 23 GLU 23 3 3 GLU GLU A . n A 1 24 PHE 24 4 4 PHE PHE A . n A 1 25 LYS 25 5 5 LYS LYS A . n A 1 26 ASP 26 6 6 ASP ASP A . n A 1 27 TYR 27 7 7 TYR TYR A . n A 1 28 TYR 28 8 8 TYR TYR A . n A 1 29 GLN 29 9 9 GLN GLN A . n A 1 30 ASN 30 10 10 ASN ASN A . n A 1 31 THR 31 11 11 THR THR A . n A 1 32 VAL 32 12 12 VAL VAL A . n A 1 33 GLN 33 13 13 GLN GLN A . n A 1 34 LEU 34 14 14 LEU LEU A . n A 1 35 SER 35 15 15 SER SER A . n A 1 36 PHE 36 16 16 PHE PHE A . n A 1 37 ASP 37 17 17 ASP ASP A . n A 1 38 ASP 38 18 18 ASP ASP A . n A 1 39 GLN 39 19 19 GLN GLN A . n A 1 40 PRO 40 20 20 PRO PRO A . n A 1 41 PHE 41 21 21 PHE PHE A . n A 1 42 SER 42 22 22 SER SER A . n A 1 43 ASP 43 23 23 ASP ASP A . n A 1 44 SER 44 24 24 SER SER A . n A 1 45 PRO 45 25 25 PRO PRO A . n A 1 46 LYS 46 26 26 LYS LYS A . n A 1 47 HIS 47 27 27 HIS HIS A . n A 1 48 VAL 48 28 28 VAL VAL A . n A 1 49 TRP 49 29 29 TRP TRP A . n A 1 50 VAL 50 30 30 VAL VAL A . n A 1 51 ILE 51 31 31 ILE ILE A . n A 1 52 CYS 52 32 32 CYS CYS A . n A 1 53 ARG 53 33 33 ARG ARG A . n A 1 54 PHE 54 34 34 PHE PHE A . n A 1 55 GLY 55 35 35 GLY GLY A . n A 1 56 GLY 56 36 36 GLY GLY A . n A 1 57 LYS 57 37 37 LYS LYS A . n A 1 58 TRP 58 38 38 TRP TRP A . n A 1 59 LEU 59 39 39 LEU LEU A . n A 1 60 LEU 60 40 40 LEU LEU A . n A 1 61 THR 61 41 41 THR THR A . n A 1 62 GLU 62 42 42 GLU GLU A . n A 1 63 HIS 63 43 43 HIS HIS A . n A 1 64 GLU 64 44 44 GLU GLU A . n A 1 65 ASP 65 45 45 ASP ASP A . n A 1 66 ARG 66 46 46 ARG ARG A . n A 1 67 GLY 67 47 47 GLY GLY A . n A 1 68 TYR 68 48 48 TYR TYR A . n A 1 69 GLU 69 49 49 GLU GLU A . n A 1 70 PHE 70 50 50 PHE PHE A . n A 1 71 PRO 71 51 51 PRO PRO A . n A 1 72 GLY 72 52 52 GLY GLY A . n A 1 73 GLY 73 53 53 GLY GLY A . n A 1 74 LYS 74 54 54 LYS LYS A . n A 1 75 VAL 75 55 55 VAL VAL A . n A 1 76 GLU 76 56 56 GLU GLU A . n A 1 77 PRO 77 57 57 PRO PRO A . n A 1 78 MET 78 58 58 MET MET A . n A 1 79 GLU 79 59 59 GLU GLU A . n A 1 80 CYS 80 60 60 CYS CYS A . n A 1 81 ALA 81 61 61 ALA ALA A . n A 1 82 GLU 82 62 62 GLU GLU A . n A 1 83 GLU 83 63 63 GLU GLU A . n A 1 84 ALA 84 64 64 ALA ALA A . n A 1 85 ALA 85 65 65 ALA ALA A . n A 1 86 LEU 86 66 66 LEU LEU A . n A 1 87 ARG 87 67 67 ARG ARG A . n A 1 88 ALA 88 68 68 ALA ALA A . n A 1 89 VAL 89 69 69 VAL VAL A . n A 1 90 LYS 90 70 70 LYS LYS A . n A 1 91 GLU 91 71 71 GLU GLU A . n A 1 92 GLU 92 72 72 GLU GLU A . n A 1 93 THR 93 73 73 THR THR A . n A 1 94 GLY 94 74 74 GLY GLY A . n A 1 95 ALA 95 75 75 ALA ALA A . n A 1 96 ARG 96 76 76 ARG ARG A . n A 1 97 VAL 97 77 77 VAL VAL A . n A 1 98 LYS 98 78 78 LYS LYS A . n A 1 99 SER 99 79 79 SER SER A . n A 1 100 LEU 100 80 80 LEU LEU A . n A 1 101 LYS 101 81 81 LYS LYS A . n A 1 102 TYR 102 82 82 TYR TYR A . n A 1 103 LEU 103 83 83 LEU LEU A . n A 1 104 GLY 104 84 84 GLY GLY A . n A 1 105 GLN 105 85 85 GLN GLN A . n A 1 106 TYR 106 86 86 TYR TYR A . n A 1 107 LYS 107 87 87 LYS LYS A . n A 1 108 VAL 108 88 88 VAL VAL A . n A 1 109 LEU 109 89 89 LEU LEU A . n A 1 110 GLY 110 90 90 GLY GLY A . n A 1 111 LYS 111 91 91 LYS LYS A . n A 1 112 GLU 112 92 92 GLU GLU A . n A 1 113 LYS 113 93 93 LYS LYS A . n A 1 114 VAL 114 94 94 VAL VAL A . n A 1 115 ILE 115 95 95 ILE ILE A . n A 1 116 VAL 116 96 96 VAL VAL A . n A 1 117 LYS 117 97 97 LYS LYS A . n A 1 118 ASN 118 98 98 ASN ASN A . n A 1 119 ILE 119 99 99 ILE ILE A . n A 1 120 TYR 120 100 100 TYR TYR A . n A 1 121 PHE 121 101 101 PHE PHE A . n A 1 122 ALA 122 102 102 ALA ALA A . n A 1 123 ASP 123 103 103 ASP ASP A . n A 1 124 ILE 124 104 104 ILE ILE A . n A 1 125 GLU 125 105 105 GLU GLU A . n A 1 126 LYS 126 106 106 LYS LYS A . n A 1 127 LEU 127 107 107 LEU LEU A . n A 1 128 GLU 128 108 108 GLU GLU A . n A 1 129 LYS 129 109 109 LYS LYS A . n A 1 130 GLN 130 110 110 GLN GLN A . n A 1 131 ALA 131 111 111 ALA ALA A . n A 1 132 ASP 132 112 112 ASP ASP A . n A 1 133 TYR 133 113 113 TYR TYR A . n A 1 134 PHE 134 114 114 PHE PHE A . n A 1 135 GLU 135 115 115 GLU GLU A . n A 1 136 THR 136 116 116 THR THR A . n A 1 137 LYS 137 117 117 LYS LYS A . n A 1 138 GLY 138 118 118 GLY GLY A . n A 1 139 PRO 139 119 119 PRO PRO A . n A 1 140 VAL 140 120 120 VAL VAL A . n A 1 141 LEU 141 121 121 LEU LEU A . n A 1 142 PHE 142 122 122 PHE PHE A . n A 1 143 HIS 143 123 123 HIS HIS A . n A 1 144 GLU 144 124 124 GLU GLU A . n A 1 145 LEU 145 125 125 LEU LEU A . n A 1 146 PRO 146 126 126 PRO PRO A . n A 1 147 GLU 147 127 127 GLU GLU A . n A 1 148 ASN 148 128 128 ASN ASN A . n A 1 149 LEU 149 129 129 LEU LEU A . n A 1 150 SER 150 130 130 SER SER A . n A 1 151 ARG 151 131 131 ARG ARG A . n A 1 152 ASN 152 132 132 ASN ASN A . n A 1 153 LYS 153 133 133 LYS LYS A . n A 1 154 LYS 154 134 134 LYS LYS A . n A 1 155 PHE 155 135 135 PHE PHE A . n A 1 156 SER 156 136 136 SER SER A . n A 1 157 PHE 157 137 137 PHE PHE A . n A 1 158 ILE 158 138 138 ILE ILE A . n A 1 159 MET 159 139 139 MET MET A . n A 1 160 LYS 160 140 140 LYS LYS A . n A 1 161 ASP 161 141 141 ASP ASP A . n A 1 162 SER 162 142 142 SER SER A . n A 1 163 VAL 163 143 143 VAL VAL A . n A 1 164 LEU 164 144 144 LEU LEU A . n A 1 165 PRO 165 145 145 PRO PRO A . n A 1 166 ILE 166 146 146 ILE ILE A . n A 1 167 SER 167 147 147 SER SER A . n A 1 168 LEU 168 148 148 LEU LEU A . n A 1 169 LYS 169 149 149 LYS LYS A . n A 1 170 LYS 170 150 150 LYS LYS A . n A 1 171 LEU 171 151 151 LEU LEU A . n A 1 172 LYS 172 152 152 LYS LYS A . n A 1 173 GLU 173 153 153 GLU GLU A . n A 1 174 SER 174 154 154 SER SER A . n A 1 175 GLY 175 155 155 GLY GLY A . n A 1 176 TRP 176 156 156 TRP TRP A . n A 1 177 ILE 177 157 157 ILE ILE A . n A 1 178 GLU 178 158 158 GLU GLU A . n B 1 1 MET 1 -19 ? ? ? D . n B 1 2 GLY 2 -18 ? ? ? D . n B 1 3 SER 3 -17 ? ? ? D . n B 1 4 SER 4 -16 ? ? ? D . n B 1 5 HIS 5 -15 ? ? ? D . n B 1 6 HIS 6 -14 ? ? ? D . n B 1 7 HIS 7 -13 ? ? ? D . n B 1 8 HIS 8 -12 ? ? ? D . n B 1 9 HIS 9 -11 ? ? ? D . n B 1 10 HIS 10 -10 ? ? ? D . n B 1 11 SER 11 -9 ? ? ? D . n B 1 12 SER 12 -8 ? ? ? D . n B 1 13 GLY 13 -7 ? ? ? D . n B 1 14 LEU 14 -6 ? ? ? D . n B 1 15 VAL 15 -5 ? ? ? D . n B 1 16 PRO 16 -4 ? ? ? D . n B 1 17 ARG 17 -3 ? ? ? D . n B 1 18 GLY 18 -2 ? ? ? D . n B 1 19 SER 19 -1 ? ? ? D . n B 1 20 HIS 20 0 ? ? ? D . n B 1 21 MET 21 1 1 MET MET D . n B 1 22 TYR 22 2 2 TYR TYR D . n B 1 23 GLU 23 3 3 GLU GLU D . n B 1 24 PHE 24 4 4 PHE PHE D . n B 1 25 LYS 25 5 5 LYS LYS D . n B 1 26 ASP 26 6 6 ASP ASP D . n B 1 27 TYR 27 7 7 TYR TYR D . n B 1 28 TYR 28 8 8 TYR TYR D . n B 1 29 GLN 29 9 9 GLN GLN D . n B 1 30 ASN 30 10 10 ASN ASN D . n B 1 31 THR 31 11 11 THR THR D . n B 1 32 VAL 32 12 12 VAL VAL D . n B 1 33 GLN 33 13 13 GLN GLN D . n B 1 34 LEU 34 14 14 LEU LEU D . n B 1 35 SER 35 15 15 SER SER D . n B 1 36 PHE 36 16 16 PHE PHE D . n B 1 37 ASP 37 17 17 ASP ASP D . n B 1 38 ASP 38 18 18 ASP ASP D . n B 1 39 GLN 39 19 19 GLN GLN D . n B 1 40 PRO 40 20 20 PRO PRO D . n B 1 41 PHE 41 21 21 PHE PHE D . n B 1 42 SER 42 22 22 SER SER D . n B 1 43 ASP 43 23 23 ASP ASP D . n B 1 44 SER 44 24 24 SER SER D . n B 1 45 PRO 45 25 25 PRO PRO D . n B 1 46 LYS 46 26 26 LYS LYS D . n B 1 47 HIS 47 27 27 HIS HIS D . n B 1 48 VAL 48 28 28 VAL VAL D . n B 1 49 TRP 49 29 29 TRP TRP D . n B 1 50 VAL 50 30 30 VAL VAL D . n B 1 51 ILE 51 31 31 ILE ILE D . n B 1 52 CYS 52 32 32 CYS CYS D . n B 1 53 ARG 53 33 33 ARG ARG D . n B 1 54 PHE 54 34 34 PHE PHE D . n B 1 55 GLY 55 35 35 GLY GLY D . n B 1 56 GLY 56 36 36 GLY GLY D . n B 1 57 LYS 57 37 37 LYS LYS D . n B 1 58 TRP 58 38 38 TRP TRP D . n B 1 59 LEU 59 39 39 LEU LEU D . n B 1 60 LEU 60 40 40 LEU LEU D . n B 1 61 THR 61 41 41 THR THR D . n B 1 62 GLU 62 42 42 GLU GLU D . n B 1 63 HIS 63 43 43 HIS HIS D . n B 1 64 GLU 64 44 44 GLU GLU D . n B 1 65 ASP 65 45 45 ASP ASP D . n B 1 66 ARG 66 46 46 ARG ARG D . n B 1 67 GLY 67 47 47 GLY GLY D . n B 1 68 TYR 68 48 48 TYR TYR D . n B 1 69 GLU 69 49 49 GLU GLU D . n B 1 70 PHE 70 50 50 PHE PHE D . n B 1 71 PRO 71 51 51 PRO PRO D . n B 1 72 GLY 72 52 52 GLY GLY D . n B 1 73 GLY 73 53 53 GLY GLY D . n B 1 74 LYS 74 54 54 LYS LYS D . n B 1 75 VAL 75 55 55 VAL VAL D . n B 1 76 GLU 76 56 56 GLU GLU D . n B 1 77 PRO 77 57 57 PRO PRO D . n B 1 78 MET 78 58 58 MET MET D . n B 1 79 GLU 79 59 59 GLU GLU D . n B 1 80 CYS 80 60 60 CYS CYS D . n B 1 81 ALA 81 61 61 ALA ALA D . n B 1 82 GLU 82 62 62 GLU GLU D . n B 1 83 GLU 83 63 63 GLU GLU D . n B 1 84 ALA 84 64 64 ALA ALA D . n B 1 85 ALA 85 65 65 ALA ALA D . n B 1 86 LEU 86 66 66 LEU LEU D . n B 1 87 ARG 87 67 67 ARG ARG D . n B 1 88 ALA 88 68 68 ALA ALA D . n B 1 89 VAL 89 69 69 VAL VAL D . n B 1 90 LYS 90 70 70 LYS LYS D . n B 1 91 GLU 91 71 71 GLU GLU D . n B 1 92 GLU 92 72 72 GLU GLU D . n B 1 93 THR 93 73 73 THR THR D . n B 1 94 GLY 94 74 74 GLY GLY D . n B 1 95 ALA 95 75 75 ALA ALA D . n B 1 96 ARG 96 76 76 ARG ARG D . n B 1 97 VAL 97 77 77 VAL VAL D . n B 1 98 LYS 98 78 78 LYS LYS D . n B 1 99 SER 99 79 79 SER SER D . n B 1 100 LEU 100 80 80 LEU LEU D . n B 1 101 LYS 101 81 81 LYS LYS D . n B 1 102 TYR 102 82 82 TYR TYR D . n B 1 103 LEU 103 83 83 LEU LEU D . n B 1 104 GLY 104 84 84 GLY GLY D . n B 1 105 GLN 105 85 85 GLN GLN D . n B 1 106 TYR 106 86 86 TYR TYR D . n B 1 107 LYS 107 87 87 LYS LYS D . n B 1 108 VAL 108 88 88 VAL VAL D . n B 1 109 LEU 109 89 89 LEU LEU D . n B 1 110 GLY 110 90 90 GLY GLY D . n B 1 111 LYS 111 91 91 LYS LYS D . n B 1 112 GLU 112 92 92 GLU GLU D . n B 1 113 LYS 113 93 93 LYS LYS D . n B 1 114 VAL 114 94 94 VAL VAL D . n B 1 115 ILE 115 95 95 ILE ILE D . n B 1 116 VAL 116 96 96 VAL VAL D . n B 1 117 LYS 117 97 97 LYS LYS D . n B 1 118 ASN 118 98 98 ASN ASN D . n B 1 119 ILE 119 99 99 ILE ILE D . n B 1 120 TYR 120 100 100 TYR TYR D . n B 1 121 PHE 121 101 101 PHE PHE D . n B 1 122 ALA 122 102 102 ALA ALA D . n B 1 123 ASP 123 103 103 ASP ASP D . n B 1 124 ILE 124 104 104 ILE ILE D . n B 1 125 GLU 125 105 105 GLU GLU D . n B 1 126 LYS 126 106 106 LYS LYS D . n B 1 127 LEU 127 107 107 LEU LEU D . n B 1 128 GLU 128 108 108 GLU GLU D . n B 1 129 LYS 129 109 109 LYS LYS D . n B 1 130 GLN 130 110 110 GLN GLN D . n B 1 131 ALA 131 111 111 ALA ALA D . n B 1 132 ASP 132 112 112 ASP ASP D . n B 1 133 TYR 133 113 113 TYR TYR D . n B 1 134 PHE 134 114 114 PHE PHE D . n B 1 135 GLU 135 115 115 GLU GLU D . n B 1 136 THR 136 116 116 THR THR D . n B 1 137 LYS 137 117 117 LYS LYS D . n B 1 138 GLY 138 118 118 GLY GLY D . n B 1 139 PRO 139 119 119 PRO PRO D . n B 1 140 VAL 140 120 120 VAL VAL D . n B 1 141 LEU 141 121 121 LEU LEU D . n B 1 142 PHE 142 122 122 PHE PHE D . n B 1 143 HIS 143 123 123 HIS HIS D . n B 1 144 GLU 144 124 124 GLU GLU D . n B 1 145 LEU 145 125 125 LEU LEU D . n B 1 146 PRO 146 126 126 PRO PRO D . n B 1 147 GLU 147 127 127 GLU GLU D . n B 1 148 ASN 148 128 128 ASN ASN D . n B 1 149 LEU 149 129 129 LEU LEU D . n B 1 150 SER 150 130 130 SER SER D . n B 1 151 ARG 151 131 131 ARG ARG D . n B 1 152 ASN 152 132 132 ASN ASN D . n B 1 153 LYS 153 133 133 LYS LYS D . n B 1 154 LYS 154 134 134 LYS LYS D . n B 1 155 PHE 155 135 135 PHE PHE D . n B 1 156 SER 156 136 136 SER SER D . n B 1 157 PHE 157 137 137 PHE PHE D . n B 1 158 ILE 158 138 138 ILE ILE D . n B 1 159 MET 159 139 139 MET MET D . n B 1 160 LYS 160 140 140 LYS LYS D . n B 1 161 ASP 161 141 141 ASP ASP D . n B 1 162 SER 162 142 142 SER SER D . n B 1 163 VAL 163 143 143 VAL VAL D . n B 1 164 LEU 164 144 144 LEU LEU D . n B 1 165 PRO 165 145 145 PRO PRO D . n B 1 166 ILE 166 146 146 ILE ILE D . n B 1 167 SER 167 147 147 SER SER D . n B 1 168 LEU 168 148 148 LEU LEU D . n B 1 169 LYS 169 149 149 LYS LYS D . n B 1 170 LYS 170 150 150 LYS LYS D . n B 1 171 LEU 171 151 151 LEU LEU D . n B 1 172 LYS 172 152 152 LYS LYS D . n B 1 173 GLU 173 153 153 GLU GLU D . n B 1 174 SER 174 154 154 SER SER D . n B 1 175 GLY 175 155 155 GLY GLY D . n B 1 176 TRP 176 156 156 TRP TRP D . n B 1 177 ILE 177 157 157 ILE ILE D . n B 1 178 GLU 178 158 158 GLU GLU D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTP 1 201 159 GTP GTP A . D 3 HOH 1 301 1 HOH HOH A . D 3 HOH 2 302 5 HOH HOH A . D 3 HOH 3 303 8 HOH HOH A . D 3 HOH 4 304 10 HOH HOH A . D 3 HOH 5 305 12 HOH HOH A . D 3 HOH 6 306 13 HOH HOH A . D 3 HOH 7 307 15 HOH HOH A . D 3 HOH 8 308 26 HOH HOH A . D 3 HOH 9 309 42 HOH HOH A . D 3 HOH 10 310 45 HOH HOH A . D 3 HOH 11 311 51 HOH HOH A . D 3 HOH 12 312 58 HOH HOH A . E 3 HOH 1 201 4 HOH HOH D . E 3 HOH 2 202 7 HOH HOH D . E 3 HOH 3 203 17 HOH HOH D . E 3 HOH 4 204 38 HOH HOH D . E 3 HOH 5 205 41 HOH HOH D . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA . ? other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 BUSTER-TNT 'BUSTER 2.10.0' ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _cell.length_a 117.652 _cell.length_b 117.652 _cell.length_c 55.605 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4JZT _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 63' _symmetry.entry_id 4JZT _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 173 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4JZT _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '1.9 M ammonium sulfate, 0.1 M Tris pH 8.3, 10 mM TCEP, vapor diffusion, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2011-09-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'DIAMOND (1 1 1)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.93340 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_wavelength_list 0.93340 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 # _reflns.entry_id 4JZT _reflns.observed_criterion_sigma_F -3.0 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 48.81 _reflns.number_all 9913 _reflns.number_obs 9913 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.692 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 7.5 _reflns_shell.number_unique_all 1422 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4JZT _refine.ls_d_res_high 2.9000 _refine.ls_d_res_low 48.8100 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_number_reflns_obs 9904 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2151 _refine.ls_R_factor_R_work 0.2136 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2451 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8100 _refine.ls_number_reflns_R_free 476 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 82.0431 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -4.6362 _refine.aniso_B[2][2] -4.6362 _refine.aniso_B[3][3] 9.2724 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9215 _refine.correlation_coeff_Fo_to_Fc_free 0.8968 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'STRUCTURE OF BSRPPH E68A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 191.690 _refine.B_iso_min 45.610 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4JZT _refine_analyze.Luzzati_coordinate_error_obs 0.479 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2606 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 2655 _refine_hist.d_res_high 2.9000 _refine_hist.d_res_low 48.8100 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 973 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 70 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 388 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2706 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_chiral_improper_torsion 322 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_ideal_dist_contact 2831 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2706 0.007 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 3644 0.940 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 2.060 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 20.360 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.9000 _refine_ls_shell.d_res_low 3.2400 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 2647 _refine_ls_shell.R_factor_all 0.2575 _refine_ls_shell.R_factor_R_work 0.2557 _refine_ls_shell.R_factor_R_free 0.2912 _refine_ls_shell.percent_reflns_R_free 4.9600 _refine_ls_shell.number_reflns_R_free 138 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2785 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4JZT _struct.title 'Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant) bound to GTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JZT _struct_keywords.text 'Nudix hydrolase, RNA pyrophosphohydrolase, RppH, cytosol, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YTKD_BACSU _struct_ref.pdbx_db_accession O35013 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMECAEEAALREVKEETGARVKSL KYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKKLKESGWIE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JZT A 21 ? 178 ? O35013 1 ? 158 ? 1 158 2 1 4JZT D 21 ? 178 ? O35013 1 ? 158 ? 1 158 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JZT MET A 1 ? UNP O35013 ? ? 'expression tag' -19 1 1 4JZT GLY A 2 ? UNP O35013 ? ? 'expression tag' -18 2 1 4JZT SER A 3 ? UNP O35013 ? ? 'expression tag' -17 3 1 4JZT SER A 4 ? UNP O35013 ? ? 'expression tag' -16 4 1 4JZT HIS A 5 ? UNP O35013 ? ? 'expression tag' -15 5 1 4JZT HIS A 6 ? UNP O35013 ? ? 'expression tag' -14 6 1 4JZT HIS A 7 ? UNP O35013 ? ? 'expression tag' -13 7 1 4JZT HIS A 8 ? UNP O35013 ? ? 'expression tag' -12 8 1 4JZT HIS A 9 ? UNP O35013 ? ? 'expression tag' -11 9 1 4JZT HIS A 10 ? UNP O35013 ? ? 'expression tag' -10 10 1 4JZT SER A 11 ? UNP O35013 ? ? 'expression tag' -9 11 1 4JZT SER A 12 ? UNP O35013 ? ? 'expression tag' -8 12 1 4JZT GLY A 13 ? UNP O35013 ? ? 'expression tag' -7 13 1 4JZT LEU A 14 ? UNP O35013 ? ? 'expression tag' -6 14 1 4JZT VAL A 15 ? UNP O35013 ? ? 'expression tag' -5 15 1 4JZT PRO A 16 ? UNP O35013 ? ? 'expression tag' -4 16 1 4JZT ARG A 17 ? UNP O35013 ? ? 'expression tag' -3 17 1 4JZT GLY A 18 ? UNP O35013 ? ? 'expression tag' -2 18 1 4JZT SER A 19 ? UNP O35013 ? ? 'expression tag' -1 19 1 4JZT HIS A 20 ? UNP O35013 ? ? 'expression tag' 0 20 1 4JZT ALA A 88 ? UNP O35013 GLU 68 'engineered mutation' 68 21 2 4JZT MET D 1 ? UNP O35013 ? ? 'expression tag' -19 22 2 4JZT GLY D 2 ? UNP O35013 ? ? 'expression tag' -18 23 2 4JZT SER D 3 ? UNP O35013 ? ? 'expression tag' -17 24 2 4JZT SER D 4 ? UNP O35013 ? ? 'expression tag' -16 25 2 4JZT HIS D 5 ? UNP O35013 ? ? 'expression tag' -15 26 2 4JZT HIS D 6 ? UNP O35013 ? ? 'expression tag' -14 27 2 4JZT HIS D 7 ? UNP O35013 ? ? 'expression tag' -13 28 2 4JZT HIS D 8 ? UNP O35013 ? ? 'expression tag' -12 29 2 4JZT HIS D 9 ? UNP O35013 ? ? 'expression tag' -11 30 2 4JZT HIS D 10 ? UNP O35013 ? ? 'expression tag' -10 31 2 4JZT SER D 11 ? UNP O35013 ? ? 'expression tag' -9 32 2 4JZT SER D 12 ? UNP O35013 ? ? 'expression tag' -8 33 2 4JZT GLY D 13 ? UNP O35013 ? ? 'expression tag' -7 34 2 4JZT LEU D 14 ? UNP O35013 ? ? 'expression tag' -6 35 2 4JZT VAL D 15 ? UNP O35013 ? ? 'expression tag' -5 36 2 4JZT PRO D 16 ? UNP O35013 ? ? 'expression tag' -4 37 2 4JZT ARG D 17 ? UNP O35013 ? ? 'expression tag' -3 38 2 4JZT GLY D 18 ? UNP O35013 ? ? 'expression tag' -2 39 2 4JZT SER D 19 ? UNP O35013 ? ? 'expression tag' -1 40 2 4JZT HIS D 20 ? UNP O35013 ? ? 'expression tag' 0 41 2 4JZT ALA D 88 ? UNP O35013 GLU 68 'engineered mutation' 68 42 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D 2 1 B,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 80 ? THR A 93 ? CYS A 60 THR A 73 1 ? 14 HELX_P HELX_P2 2 SER A 156 ? LYS A 160 ? SER A 136 LYS A 140 5 ? 5 HELX_P HELX_P3 3 SER A 162 ? GLU A 173 ? SER A 142 GLU A 153 1 ? 12 HELX_P HELX_P4 4 CYS B 80 ? THR B 93 ? CYS D 60 THR D 73 1 ? 14 HELX_P HELX_P5 5 SER B 162 ? GLY B 175 ? SER D 142 GLY D 155 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 174 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 154 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 175 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 155 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -12.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 4 ? C ? 6 ? D ? 4 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 67 ? GLU A 69 ? GLY A 47 GLU A 49 A 2 LYS A 57 ? HIS A 63 ? LYS A 37 HIS A 43 A 3 HIS A 47 ? PHE A 54 ? HIS A 27 PHE A 34 A 4 VAL A 114 ? LEU A 127 ? VAL A 94 LEU A 107 A 5 ALA A 95 ? LEU A 109 ? ALA A 75 LEU A 89 A 6 THR A 31 ? SER A 35 ? THR A 11 SER A 15 A 7 TYR A 22 ? LYS A 25 ? TYR A 2 LYS A 5 A 8 ALA B 95 ? GLY B 110 ? ALA D 75 GLY D 90 A 9 THR B 31 ? PHE B 36 ? THR D 11 PHE D 16 A 10 TYR B 22 ? LYS B 25 ? TYR D 2 LYS D 5 B 1 THR A 136 ? PHE A 142 ? THR A 116 PHE A 122 B 2 LYS A 57 ? HIS A 63 ? LYS A 37 HIS A 43 B 3 HIS A 47 ? PHE A 54 ? HIS A 27 PHE A 34 B 4 GLY A 72 ? LYS A 74 ? GLY A 52 LYS A 54 C 1 TYR B 22 ? LYS B 25 ? TYR D 2 LYS D 5 C 2 THR B 31 ? PHE B 36 ? THR D 11 PHE D 16 C 3 ALA B 95 ? GLY B 110 ? ALA D 75 GLY D 90 C 4 ILE B 115 ? LEU B 127 ? ILE D 95 LEU D 107 C 5 HIS B 47 ? PHE B 54 ? HIS D 27 PHE D 34 C 6 GLY B 72 ? LYS B 74 ? GLY D 52 LYS D 54 D 1 HIS B 47 ? PHE B 54 ? HIS D 27 PHE D 34 D 2 GLY B 72 ? LYS B 74 ? GLY D 52 LYS D 54 D 3 LYS B 57 ? HIS B 63 ? LYS D 37 HIS D 43 D 4 TYR B 68 ? GLU B 69 ? TYR D 48 GLU D 49 E 1 THR B 136 ? PHE B 142 ? THR D 116 PHE D 122 E 2 LYS B 57 ? HIS B 63 ? LYS D 37 HIS D 43 E 3 HIS B 47 ? PHE B 54 ? HIS D 27 PHE D 34 E 4 ILE B 115 ? LEU B 127 ? ILE D 95 LEU D 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 69 ? O GLU A 49 N THR A 61 ? N THR A 41 A 2 3 O LYS A 57 ? O LYS A 37 N PHE A 54 ? N PHE A 34 A 3 4 N ILE A 51 ? N ILE A 31 O TYR A 120 ? O TYR A 100 A 4 5 O PHE A 121 ? O PHE A 101 N LYS A 101 ? N LYS A 81 A 5 6 O LEU A 109 ? O LEU A 89 N THR A 31 ? N THR A 11 A 6 7 O VAL A 32 ? O VAL A 12 N PHE A 24 ? N PHE A 4 A 7 8 N GLU A 23 ? N GLU A 3 O LEU B 100 ? O LEU D 80 A 8 9 O LYS B 107 ? O LYS D 87 N GLN B 33 ? N GLN D 13 A 9 10 O LEU B 34 ? O LEU D 14 N TYR B 22 ? N TYR D 2 B 1 2 O VAL A 140 ? O VAL A 120 N LEU A 60 ? N LEU A 40 B 2 3 O LYS A 57 ? O LYS A 37 N PHE A 54 ? N PHE A 34 B 3 4 N VAL A 48 ? N VAL A 28 O GLY A 73 ? O GLY A 53 C 1 2 N TYR B 22 ? N TYR D 2 O LEU B 34 ? O LEU D 14 C 2 3 N GLN B 33 ? N GLN D 13 O LYS B 107 ? O LYS D 87 C 3 4 N LYS B 101 ? N LYS D 81 O PHE B 121 ? O PHE D 101 C 4 5 O ASN B 118 ? O ASN D 98 N TRP B 49 ? N TRP D 29 C 5 6 N VAL B 48 ? N VAL D 28 O GLY B 73 ? O GLY D 53 D 1 2 N VAL B 48 ? N VAL D 28 O GLY B 73 ? O GLY D 53 D 3 4 N THR B 61 ? N THR D 41 O GLU B 69 ? O GLU D 49 E 1 2 O VAL B 140 ? O VAL D 120 N LEU B 60 ? N LEU D 40 E 2 3 O LYS B 57 ? O LYS D 37 N PHE B 54 ? N PHE D 34 E 3 4 N TRP B 49 ? N TRP D 29 O ASN B 118 ? O ASN D 98 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GTP _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE GTP A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 ASP A 26 ? ASP A 6 . ? 1_555 ? 2 AC1 14 HIS A 47 ? HIS A 27 . ? 1_555 ? 3 AC1 14 LYS A 74 ? LYS A 54 . ? 1_555 ? 4 AC1 14 TYR A 106 ? TYR A 86 . ? 1_555 ? 5 AC1 14 VAL A 108 ? VAL A 88 . ? 1_555 ? 6 AC1 14 GLU A 112 ? GLU A 92 . ? 2_665 ? 7 AC1 14 LYS A 113 ? LYS A 93 . ? 1_555 ? 8 AC1 14 ILE A 115 ? ILE A 95 . ? 1_555 ? 9 AC1 14 LYS A 117 ? LYS A 97 . ? 1_555 ? 10 AC1 14 PHE A 157 ? PHE A 137 . ? 1_555 ? 11 AC1 14 ILE A 158 ? ILE A 138 . ? 1_555 ? 12 AC1 14 ASP A 161 ? ASP A 141 . ? 1_555 ? 13 AC1 14 HOH D . ? HOH A 312 . ? 1_555 ? 14 AC1 14 LYS B 111 ? LYS D 91 . ? 1_554 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 18 ? ? -69.28 91.37 2 1 PHE A 34 ? ? -103.95 75.09 3 1 GLU A 92 ? ? -120.07 -59.93 4 1 GLN D 19 ? ? -116.22 77.30 5 1 LEU D 83 ? ? -98.90 -68.57 6 1 GLU D 92 ? ? -140.28 -22.95 7 1 PHE D 114 ? ? 55.95 73.64 8 1 LEU D 129 ? ? 67.60 -63.93 9 1 LYS D 140 ? ? -96.90 46.53 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 3.4078 45.8165 -13.1458 -0.1867 -0.0631 -0.0990 0.0189 -0.0274 0.0072 4.9834 2.7134 5.5874 -0.7023 -1.8454 0.7339 0.0620 -0.0723 0.0103 0.0812 -0.2856 -0.0080 -0.1912 0.1573 0.0800 'X-RAY DIFFRACTION' 2 ? refined -12.6688 48.5805 14.0576 -0.2187 0.0493 -0.0869 -0.0774 0.0081 0.1161 2.5292 2.8667 5.0705 0.9020 -1.4223 -0.2874 -0.0039 -0.0271 0.0310 -0.0522 -0.1464 -0.0105 0.2678 -0.1995 0.0963 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 158 '{ A|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 D 1 D 158 '{ D|* }' ? ? ? ? ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 D MET -19 ? B MET 1 22 1 Y 1 D GLY -18 ? B GLY 2 23 1 Y 1 D SER -17 ? B SER 3 24 1 Y 1 D SER -16 ? B SER 4 25 1 Y 1 D HIS -15 ? B HIS 5 26 1 Y 1 D HIS -14 ? B HIS 6 27 1 Y 1 D HIS -13 ? B HIS 7 28 1 Y 1 D HIS -12 ? B HIS 8 29 1 Y 1 D HIS -11 ? B HIS 9 30 1 Y 1 D HIS -10 ? B HIS 10 31 1 Y 1 D SER -9 ? B SER 11 32 1 Y 1 D SER -8 ? B SER 12 33 1 Y 1 D GLY -7 ? B GLY 13 34 1 Y 1 D LEU -6 ? B LEU 14 35 1 Y 1 D VAL -5 ? B VAL 15 36 1 Y 1 D PRO -4 ? B PRO 16 37 1 Y 1 D ARG -3 ? B ARG 17 38 1 Y 1 D GLY -2 ? B GLY 18 39 1 Y 1 D SER -1 ? B SER 19 40 1 Y 1 D HIS 0 ? B HIS 20 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'STRUCTURE OF BSRPPH E68A' # _atom_sites.entry_id 4JZT _atom_sites.fract_transf_matrix[1][1] 0.008500 _atom_sites.fract_transf_matrix[1][2] 0.004907 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009815 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017984 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_