data_4K0A # _entry.id 4K0A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4K0A RCSB RCSB078728 WWPDB D_1000078728 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4JZW ;'Crystal structure of CD4-mimetic miniprotein M48U1 in complex with HIV-1 YU2 gp120 in P212121 space group ; unspecified PDB 4JZZ ;'Crystal structure of CD4-mimetic miniprotein M48U1 in complex with HIV-1 YU2 gp120 in C2221 space group ; unspecified PDB 4K0A . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4K0A _pdbx_database_status.recvd_initial_deposition_date 2013-04-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Acharya, P.' 1 'Kwong, P.D.' 2 # _citation.id primary _citation.title ;Structural Basis for Highly Effective HIV-1 Neutralization by CD4-Mimetic Miniproteins Revealed by 1.5 A Cocrystal Structure of gp120 and M48U1. ; _citation.journal_abbrev Structure _citation.journal_volume 21 _citation.page_first 1018 _citation.page_last 1029 _citation.year 2013 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23707685 _citation.pdbx_database_id_DOI 10.1016/j.str.2013.04.015 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Acharya, P.' 1 ? primary 'Luongo, T.S.' 2 ? primary 'Louder, M.K.' 3 ? primary 'McKee, K.' 4 ? primary 'Yang, Y.' 5 ? primary 'Do Kwon, Y.' 6 ? primary 'Mascola, J.R.' 7 ? primary 'Kessler, P.' 8 ? primary 'Martin, L.' 9 ? primary 'Kwong, P.D.' 10 ? # _cell.entry_id 4K0A _cell.length_a 65.521 _cell.length_b 164.657 _cell.length_c 78.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4K0A _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 YU2 gp120 glycoprotein' 41695.406 1 ? ? ? ? 2 polymer syn 'CD4-MIMETIC MINIPROTEIN M48U7' 3046.766 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 8 ? ? ? ? 4 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 4 ? ? ? ? 5 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 6 water nat water 18.015 151 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MPMGSLQPLATLYLLGMLVASVLAVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLENVTENFNMWKNN MVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIR PVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNGGSGSGGDIRQAHCNLSKTQWENTLEQIAIK LKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYA PPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE ; ;MPMGSLQPLATLYLLGMLVASVLAVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLENVTENFNMWKNN MVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIR PVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNGGSGSGGDIRQAHCNLSKTQWENTLEQIAIK LKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYA PPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE ; A ? 2 'polypeptide(L)' no yes '(MPT)NLHFCQLRCKSLGLLGRCA(DPR)T(1OP)CACV(NH2)' XNLHFCQLRCKSLGLLGRCAPTYCACVX R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 MET n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 GLN n 1 8 PRO n 1 9 LEU n 1 10 ALA n 1 11 THR n 1 12 LEU n 1 13 TYR n 1 14 LEU n 1 15 LEU n 1 16 GLY n 1 17 MET n 1 18 LEU n 1 19 VAL n 1 20 ALA n 1 21 SER n 1 22 VAL n 1 23 LEU n 1 24 ALA n 1 25 VAL n 1 26 TRP n 1 27 LYS n 1 28 GLU n 1 29 ALA n 1 30 THR n 1 31 THR n 1 32 THR n 1 33 LEU n 1 34 PHE n 1 35 CYS n 1 36 ALA n 1 37 SER n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 ALA n 1 42 TYR n 1 43 ASP n 1 44 THR n 1 45 GLU n 1 46 VAL n 1 47 HIS n 1 48 ASN n 1 49 VAL n 1 50 TRP n 1 51 ALA n 1 52 THR n 1 53 HIS n 1 54 ALA n 1 55 CYS n 1 56 VAL n 1 57 PRO n 1 58 THR n 1 59 ASP n 1 60 PRO n 1 61 ASN n 1 62 PRO n 1 63 GLN n 1 64 GLU n 1 65 VAL n 1 66 LYS n 1 67 LEU n 1 68 GLU n 1 69 ASN n 1 70 VAL n 1 71 THR n 1 72 GLU n 1 73 ASN n 1 74 PHE n 1 75 ASN n 1 76 MET n 1 77 TRP n 1 78 LYS n 1 79 ASN n 1 80 ASN n 1 81 MET n 1 82 VAL n 1 83 GLU n 1 84 GLN n 1 85 MET n 1 86 HIS n 1 87 GLU n 1 88 ASP n 1 89 ILE n 1 90 ILE n 1 91 SER n 1 92 LEU n 1 93 TRP n 1 94 ASP n 1 95 GLN n 1 96 SER n 1 97 LEU n 1 98 LYS n 1 99 PRO n 1 100 CYS n 1 101 VAL n 1 102 LYS n 1 103 LEU n 1 104 THR n 1 105 GLY n 1 106 GLY n 1 107 SER n 1 108 VAL n 1 109 ILE n 1 110 THR n 1 111 GLN n 1 112 ALA n 1 113 CYS n 1 114 PRO n 1 115 LYS n 1 116 VAL n 1 117 SER n 1 118 PHE n 1 119 GLU n 1 120 PRO n 1 121 ILE n 1 122 PRO n 1 123 ILE n 1 124 HIS n 1 125 TYR n 1 126 CYS n 1 127 ALA n 1 128 PRO n 1 129 ALA n 1 130 GLY n 1 131 PHE n 1 132 ALA n 1 133 ILE n 1 134 LEU n 1 135 LYS n 1 136 CYS n 1 137 ASN n 1 138 ASP n 1 139 LYS n 1 140 LYS n 1 141 PHE n 1 142 ASN n 1 143 GLY n 1 144 THR n 1 145 GLY n 1 146 PRO n 1 147 CYS n 1 148 THR n 1 149 ASN n 1 150 VAL n 1 151 SER n 1 152 THR n 1 153 VAL n 1 154 GLN n 1 155 CYS n 1 156 THR n 1 157 HIS n 1 158 GLY n 1 159 ILE n 1 160 ARG n 1 161 PRO n 1 162 VAL n 1 163 VAL n 1 164 SER n 1 165 THR n 1 166 GLN n 1 167 LEU n 1 168 LEU n 1 169 LEU n 1 170 ASN n 1 171 GLY n 1 172 SER n 1 173 LEU n 1 174 ALA n 1 175 GLU n 1 176 GLU n 1 177 GLU n 1 178 ILE n 1 179 VAL n 1 180 ILE n 1 181 ARG n 1 182 SER n 1 183 GLU n 1 184 ASN n 1 185 PHE n 1 186 THR n 1 187 ASN n 1 188 ASN n 1 189 ALA n 1 190 LYS n 1 191 THR n 1 192 ILE n 1 193 ILE n 1 194 VAL n 1 195 GLN n 1 196 LEU n 1 197 ASN n 1 198 GLU n 1 199 SER n 1 200 VAL n 1 201 VAL n 1 202 ILE n 1 203 ASN n 1 204 CYS n 1 205 THR n 1 206 ARG n 1 207 PRO n 1 208 ASN n 1 209 ASN n 1 210 GLY n 1 211 GLY n 1 212 SER n 1 213 GLY n 1 214 SER n 1 215 GLY n 1 216 GLY n 1 217 ASP n 1 218 ILE n 1 219 ARG n 1 220 GLN n 1 221 ALA n 1 222 HIS n 1 223 CYS n 1 224 ASN n 1 225 LEU n 1 226 SER n 1 227 LYS n 1 228 THR n 1 229 GLN n 1 230 TRP n 1 231 GLU n 1 232 ASN n 1 233 THR n 1 234 LEU n 1 235 GLU n 1 236 GLN n 1 237 ILE n 1 238 ALA n 1 239 ILE n 1 240 LYS n 1 241 LEU n 1 242 LYS n 1 243 GLU n 1 244 GLN n 1 245 PHE n 1 246 GLY n 1 247 ASN n 1 248 ASN n 1 249 LYS n 1 250 THR n 1 251 ILE n 1 252 ILE n 1 253 PHE n 1 254 ASN n 1 255 PRO n 1 256 SER n 1 257 SER n 1 258 GLY n 1 259 GLY n 1 260 ASP n 1 261 PRO n 1 262 GLU n 1 263 ILE n 1 264 VAL n 1 265 THR n 1 266 HIS n 1 267 SER n 1 268 PHE n 1 269 ASN n 1 270 CYS n 1 271 GLY n 1 272 GLY n 1 273 GLU n 1 274 PHE n 1 275 PHE n 1 276 TYR n 1 277 CYS n 1 278 ASN n 1 279 SER n 1 280 THR n 1 281 GLN n 1 282 LEU n 1 283 PHE n 1 284 THR n 1 285 TRP n 1 286 ASN n 1 287 ASP n 1 288 THR n 1 289 ARG n 1 290 LYS n 1 291 LEU n 1 292 ASN n 1 293 ASN n 1 294 THR n 1 295 GLY n 1 296 ARG n 1 297 ASN n 1 298 ILE n 1 299 THR n 1 300 LEU n 1 301 PRO n 1 302 CYS n 1 303 ARG n 1 304 ILE n 1 305 LYS n 1 306 GLN n 1 307 ILE n 1 308 ILE n 1 309 ASN n 1 310 MET n 1 311 TRP n 1 312 GLN n 1 313 GLU n 1 314 VAL n 1 315 GLY n 1 316 LYS n 1 317 ALA n 1 318 MET n 1 319 TYR n 1 320 ALA n 1 321 PRO n 1 322 PRO n 1 323 ILE n 1 324 ARG n 1 325 GLY n 1 326 GLN n 1 327 ILE n 1 328 ARG n 1 329 CYS n 1 330 SER n 1 331 SER n 1 332 ASN n 1 333 ILE n 1 334 THR n 1 335 GLY n 1 336 LEU n 1 337 LEU n 1 338 LEU n 1 339 THR n 1 340 ARG n 1 341 ASP n 1 342 GLY n 1 343 GLY n 1 344 LYS n 1 345 ASP n 1 346 THR n 1 347 ASN n 1 348 GLY n 1 349 THR n 1 350 GLU n 1 351 ILE n 1 352 PHE n 1 353 ARG n 1 354 PRO n 1 355 GLY n 1 356 GLY n 1 357 GLY n 1 358 ASP n 1 359 MET n 1 360 ARG n 1 361 ASP n 1 362 ASN n 1 363 TRP n 1 364 ARG n 1 365 SER n 1 366 GLU n 1 367 LEU n 1 368 TYR n 1 369 LYS n 1 370 TYR n 1 371 LYS n 1 372 VAL n 1 373 VAL n 1 374 LYS n 1 375 ILE n 1 376 GLU n 2 1 MPT n 2 2 ASN n 2 3 LEU n 2 4 HIS n 2 5 PHE n 2 6 CYS n 2 7 GLN n 2 8 LEU n 2 9 ARG n 2 10 CYS n 2 11 LYS n 2 12 SER n 2 13 LEU n 2 14 GLY n 2 15 LEU n 2 16 LEU n 2 17 GLY n 2 18 ARG n 2 19 CYS n 2 20 ALA n 2 21 DPR n 2 22 THR n 2 23 1OP n 2 24 CYS n 2 25 ALA n 2 26 CYS n 2 27 VAL n 2 28 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gp120 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain YU2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;M48U7 is a synthetic miniprotein DERIVED FROM SCYLLATOXIN (A SCORPION TOXIN) BY TRANSPLANTING THE GP120-INTERACTIVDERIVED FROM SCYLLATOXIN (A SCORPION TOXIN) BY TRANSPLANTING THE GP120-INTERACTIVE REGION OF CD4 ONTO THE SCYLLATOXIN SCAFFOLD,E REGION OF CD4 ONTO THE SCYLLATOXIN SCAFFOLD, ; # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 4K0A 4K0A 1 ? ? ? 2 PDB 4K0A 4K0A 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4K0A A 1 ? 376 ? 4K0A 20 ? 492 ? 20 492 2 2 4K0A R 1 ? 28 ? 4K0A 1 ? 28 ? 1 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1OP 'L-peptide linking' n 'O-(5-hydroxypentyl)-L-tyrosine' ? 'C14 H21 N O4' 267.321 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPT non-polymer . 'BETA-MERCAPTOPROPIONIC ACID' ? 'C3 H6 O2 S' 106.144 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4K0A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;9.0% PEG 4000, 14.0% isopropanol, 100 mM sodium citrate, pH 5.6, VAPOR DIFFUSION, temperature 298K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2012-06-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength 1.0000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4K0A _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.780 _reflns.number_obs 24108 _reflns.number_all ? _reflns.percent_possible_obs 58.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.12500 _reflns.pdbx_netI_over_sigmaI 12.3000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.89 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 51.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.54800 _reflns_shell.meanI_over_sigI_obs 1.300 _reflns_shell.pdbx_redundancy 1.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4K0A _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21350 _refine.ls_number_reflns_all 24163 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.41 _refine.ls_d_res_high 2.13 _refine.ls_percent_reflns_obs 88.4 _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.219 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.020 _refine.ls_number_reflns_R_free 1072 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.260 _refine.pdbx_overall_phase_error 22.330 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2846 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 141 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 3138 _refine_hist.d_res_high 2.13 _refine_hist.d_res_low 36.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 3151 'X-RAY DIFFRACTION' ? f_angle_d 0.861 ? ? 4256 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.246 ? ? 1172 'X-RAY DIFFRACTION' ? f_chiral_restr 0.044 ? ? 491 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 537 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1265 2.2233 1374 0.2398 49.00 0.2696 . . 90 . . . . 'X-RAY DIFFRACTION' . 2.2233 2.3405 2212 0.2341 78.00 0.2894 . . 114 . . . . 'X-RAY DIFFRACTION' . 2.3405 2.4871 2463 0.2316 87.00 0.2769 . . 124 . . . . 'X-RAY DIFFRACTION' . 2.4871 2.6791 2673 0.2246 94.00 0.2935 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.6791 2.9486 2765 0.2011 98.00 0.2322 . . 158 . . . . 'X-RAY DIFFRACTION' . 2.9486 3.3750 2868 0.1822 100.00 0.2393 . . 146 . . . . 'X-RAY DIFFRACTION' . 3.3750 4.2511 2906 0.1575 100.00 0.1948 . . 138 . . . . 'X-RAY DIFFRACTION' . 4.2511 36.4108 3017 0.1633 100.00 0.1832 . . 152 . . . . # _struct.entry_id 4K0A _struct.title 'Crystal structure of CD4-mimetic miniprotein M48U7 in complex with HIV-1 YU2 gp120' _struct.pdbx_descriptor 'HIV-1 YU2 gp120 glycoprotein, CD4-MIMETIC MINIPROTEIN M48U7' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4K0A _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/INHIBITOR' _struct_keywords.text 'HIV-1 attachment glycoprotein gp120, HIV-1 envelope, VIRAL PROTEIN-INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 6 ? Q N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 45 ? ALA A 54 ? GLU A 64 ALA A 73 1 ? 10 HELX_P HELX_P2 2 ASN A 79 ? LEU A 97 ? ASN A 98 LEU A 116 1 ? 19 HELX_P HELX_P3 3 LYS A 227 ? GLY A 246 ? LYS A 335 GLY A 354 1 ? 20 HELX_P HELX_P4 4 ASP A 260 ? THR A 265 ? ASP A 368 THR A 373 1 ? 6 HELX_P HELX_P5 5 THR A 280 ? THR A 284 ? THR A 388 THR A 392 5 ? 5 HELX_P HELX_P6 6 MET A 359 ? TYR A 368 ? MET A 475 TYR A 484 1 ? 10 HELX_P HELX_P7 7 ASN B 2 ? LYS B 11 ? ASN R 2 LYS R 11 1 ? 10 HELX_P HELX_P8 8 SER B 12 ? GLY B 14 ? SER R 12 GLY R 14 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 35 SG A ? ? 1_555 A CYS 55 SG ? ? A CYS 54 A CYS 74 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf2 disulf ? ? A CYS 100 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 119 A CYS 205 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 126 SG ? ? ? 1_555 A CYS 155 SG ? ? A CYS 218 A CYS 247 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? A CYS 136 SG ? ? ? 1_555 A CYS 147 SG ? ? A CYS 228 A CYS 239 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf5 disulf ? ? A CYS 204 SG ? ? ? 1_555 A CYS 223 SG ? ? A CYS 296 A CYS 331 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf6 disulf ? ? A CYS 270 SG ? ? ? 1_555 A CYS 329 SG A ? A CYS 378 A CYS 445 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf7 disulf ? ? A CYS 277 SG A ? ? 1_555 A CYS 302 SG ? ? A CYS 385 A CYS 418 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf8 disulf ? ? B MPT 1 SG ? ? ? 1_555 B CYS 19 SG ? ? R MPT 1 R CYS 19 1_555 ? ? ? ? ? ? ? 2.081 ? ? disulf9 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 24 SG ? ? R CYS 6 R CYS 24 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf10 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 26 SG ? ? R CYS 10 R CYS 26 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? A ASN 142 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 234 A NAG 502 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale2 covale one ? A ASN 149 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 241 A NAG 503 1_555 ? ? ? ? ? ? ? 1.455 ? N-Glycosylation covale3 covale one ? A ASN 170 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 262 A NAG 504 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale4 covale one ? A ASN 184 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 276 A NAG 501 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale5 covale one ? A ASN 197 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 289 A NAG 505 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale6 covale one ? A ASN 203 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 295 A NAG 506 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale7 covale one ? A ASN 278 ND2 ? ? ? 1_555 I NAG . C1 ? ? A ASN 386 A NAG 507 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale8 covale one ? A ASN 332 ND2 ? ? ? 1_555 J NAG . C1 ? ? A ASN 448 A NAG 508 1_555 ? ? ? ? ? ? ? 1.455 ? N-Glycosylation covale9 covale both ? B MPT 1 C ? ? ? 1_555 B ASN 2 N ? ? R MPT 1 R ASN 2 1_555 ? ? ? ? ? ? ? 1.330 sing ? covale10 covale none ? B MPT 1 SG ? ? ? 1_555 B CYS 19 SG ? ? R MPT 1 R CYS 19 1_555 ? ? ? ? ? ? ? 2.081 ? ? covale11 covale both ? B ALA 20 C ? ? ? 1_555 B DPR 21 N ? ? R ALA 20 R DPR 21 1_555 ? ? ? ? ? ? ? 1.349 sing ? covale12 covale both ? B DPR 21 C ? ? ? 1_555 B THR 22 N ? ? R DPR 21 R THR 22 1_555 ? ? ? ? ? ? ? 1.310 sing ? covale13 covale one ? B THR 22 C ? ? ? 1_555 B 1OP 23 N ? ? R THR 22 R 1OP 23 1_555 ? ? ? ? ? ? ? 1.358 sing ? covale14 covale both ? B 1OP 23 C ? ? ? 1_555 B CYS 24 N ? ? R 1OP 23 R CYS 24 1_555 ? ? ? ? ? ? ? 1.339 sing ? covale15 covale both ? B VAL 27 C ? ? ? 1_555 B NH2 28 N ? ? R VAL 27 R NH2 28 1_555 ? ? ? ? ? ? ? 1.377 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 2 ? D ? 4 ? E ? 7 ? F ? 6 ? G ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? parallel F 5 6 ? anti-parallel G 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 55 ? PRO A 57 ? CYS A 74 PRO A 76 A 2 PHE A 34 ? SER A 37 ? PHE A 53 SER A 56 A 3 HIS A 124 ? CYS A 126 ? HIS A 216 CYS A 218 B 1 VAL A 65 ? LEU A 67 ? VAL A 84 LEU A 86 B 2 VAL A 150 ? VAL A 153 ? VAL A 242 VAL A 245 B 3 PHE A 131 ? CYS A 136 ? PHE A 223 CYS A 228 B 4 TYR A 370 ? LYS A 374 ? TYR A 486 LYS A 490 C 1 GLU A 72 ? ASN A 75 ? GLU A 91 ASN A 94 C 2 THR A 144 ? CYS A 147 ? THR A 236 CYS A 239 D 1 SER A 107 ? THR A 110 ? SER A 199 THR A 202 D 2 VAL A 101 ? THR A 104 ? VAL A 120 THR A 123 D 3 LYS A 316 ? MET A 318 ? LYS A 432 MET A 434 D 4 ILE A 307 ? ASN A 309 ? ILE A 423 ASN A 425 E 1 LEU A 167 ? LEU A 169 ? LEU A 259 LEU A 261 E 2 ILE A 327 ? ARG A 340 ? ILE A 443 ARG A 456 E 3 ILE A 192 ? ARG A 206 ? ILE A 284 ARG A 298 E 4 GLN A 220 ? SER A 226 ? GLN A 328 SER A 334 E 5 ASN A 297 ? LYS A 305 ? ASN A 413 LYS A 421 E 6 GLU A 273 ? CYS A 277 ? GLU A 381 CYS A 385 E 7 HIS A 266 ? CYS A 270 ? HIS A 374 CYS A 378 F 1 VAL A 179 ? ARG A 181 ? VAL A 271 ARG A 273 F 2 ILE A 192 ? ARG A 206 ? ILE A 284 ARG A 298 F 3 ILE A 327 ? ARG A 340 ? ILE A 443 ARG A 456 F 4 THR A 349 ? PRO A 354 ? THR A 465 PRO A 470 F 5 THR A 250 ? PHE A 253 ? THR A 358 PHE A 361 F 6 TRP A 285 ? ASN A 286 ? TRP A 393 ASN A 394 G 1 LEU B 16 ? ALA B 20 ? LEU R 16 ALA R 20 G 2 1OP B 23 ? VAL B 27 ? 1OP R 23 VAL R 27 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 56 ? O VAL A 75 N CYS A 35 ? N CYS A 54 A 2 3 N ALA A 36 ? N ALA A 55 O HIS A 124 ? O HIS A 216 B 1 2 N VAL A 65 ? N VAL A 84 O THR A 152 ? O THR A 244 B 2 3 O SER A 151 ? O SER A 243 N LYS A 135 ? N LYS A 227 B 3 4 N LEU A 134 ? N LEU A 226 O LYS A 371 ? O LYS A 487 C 1 2 N PHE A 74 ? N PHE A 93 O GLY A 145 ? O GLY A 237 D 1 2 O SER A 107 ? O SER A 199 N THR A 104 ? N THR A 123 D 2 3 N LEU A 103 ? N LEU A 122 O LYS A 316 ? O LYS A 432 D 3 4 O ALA A 317 ? O ALA A 433 N ILE A 308 ? N ILE A 424 E 1 2 N LEU A 168 ? N LEU A 260 O GLY A 335 ? O GLY A 451 E 2 3 O LEU A 338 ? O LEU A 454 N ILE A 192 ? N ILE A 284 E 3 4 N ASN A 203 ? N ASN A 295 O ASN A 224 ? O ASN A 332 E 4 5 N LEU A 225 ? N LEU A 333 O ILE A 298 ? O ILE A 414 E 5 6 O ARG A 303 ? O ARG A 419 N TYR A 276 ? N TYR A 384 E 6 7 O PHE A 275 ? O PHE A 383 N PHE A 268 ? N PHE A 376 F 1 2 N ARG A 181 ? N ARG A 273 O ILE A 193 ? O ILE A 285 F 2 3 N ILE A 192 ? N ILE A 284 O LEU A 338 ? O LEU A 454 F 3 4 N THR A 339 ? N THR A 455 O ARG A 353 ? O ARG A 469 F 4 5 O PHE A 352 ? O PHE A 468 N ILE A 252 ? N ILE A 360 F 5 6 N PHE A 253 ? N PHE A 361 O TRP A 285 ? O TRP A 393 G 1 2 N LEU B 16 ? N LEU R 16 O VAL B 27 ? O VAL R 27 # _database_PDB_matrix.entry_id 4K0A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4K0A _atom_sites.fract_transf_matrix[1][1] 0.015262 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006073 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012821 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 20 ? ? ? A . n A 1 2 PRO 2 21 ? ? ? A . n A 1 3 MET 3 22 ? ? ? A . n A 1 4 GLY 4 23 ? ? ? A . n A 1 5 SER 5 24 ? ? ? A . n A 1 6 LEU 6 25 ? ? ? A . n A 1 7 GLN 7 26 ? ? ? A . n A 1 8 PRO 8 27 ? ? ? A . n A 1 9 LEU 9 28 ? ? ? A . n A 1 10 ALA 10 29 ? ? ? A . n A 1 11 THR 11 30 ? ? ? A . n A 1 12 LEU 12 31 ? ? ? A . n A 1 13 TYR 13 32 ? ? ? A . n A 1 14 LEU 14 33 ? ? ? A . n A 1 15 LEU 15 34 ? ? ? A . n A 1 16 GLY 16 35 ? ? ? A . n A 1 17 MET 17 36 ? ? ? A . n A 1 18 LEU 18 37 ? ? ? A . n A 1 19 VAL 19 38 ? ? ? A . n A 1 20 ALA 20 39 ? ? ? A . n A 1 21 SER 21 40 ? ? ? A . n A 1 22 VAL 22 41 ? ? ? A . n A 1 23 LEU 23 42 ? ? ? A . n A 1 24 ALA 24 43 ? ? ? A . n A 1 25 VAL 25 44 44 VAL VAL A . n A 1 26 TRP 26 45 45 TRP TRP A . n A 1 27 LYS 27 46 46 LYS LYS A . n A 1 28 GLU 28 47 47 GLU GLU A . n A 1 29 ALA 29 48 48 ALA ALA A . n A 1 30 THR 30 49 49 THR THR A . n A 1 31 THR 31 50 50 THR THR A . n A 1 32 THR 32 51 51 THR THR A . n A 1 33 LEU 33 52 52 LEU LEU A . n A 1 34 PHE 34 53 53 PHE PHE A . n A 1 35 CYS 35 54 54 CYS CYS A . n A 1 36 ALA 36 55 55 ALA ALA A . n A 1 37 SER 37 56 56 SER SER A . n A 1 38 ASP 38 57 57 ASP ASP A . n A 1 39 ALA 39 58 58 ALA ALA A . n A 1 40 LYS 40 59 59 LYS LYS A . n A 1 41 ALA 41 60 60 ALA ALA A . n A 1 42 TYR 42 61 61 TYR TYR A . n A 1 43 ASP 43 62 62 ASP ASP A . n A 1 44 THR 44 63 63 THR THR A . n A 1 45 GLU 45 64 64 GLU GLU A . n A 1 46 VAL 46 65 65 VAL VAL A . n A 1 47 HIS 47 66 66 HIS HIS A . n A 1 48 ASN 48 67 67 ASN ASN A . n A 1 49 VAL 49 68 68 VAL VAL A . n A 1 50 TRP 50 69 69 TRP TRP A . n A 1 51 ALA 51 70 70 ALA ALA A . n A 1 52 THR 52 71 71 THR THR A . n A 1 53 HIS 53 72 72 HIS HIS A . n A 1 54 ALA 54 73 73 ALA ALA A . n A 1 55 CYS 55 74 74 CYS CYS A . n A 1 56 VAL 56 75 75 VAL VAL A . n A 1 57 PRO 57 76 76 PRO PRO A . n A 1 58 THR 58 77 77 THR THR A . n A 1 59 ASP 59 78 78 ASP ASP A . n A 1 60 PRO 60 79 79 PRO PRO A . n A 1 61 ASN 61 80 80 ASN ASN A . n A 1 62 PRO 62 81 81 PRO PRO A . n A 1 63 GLN 63 82 82 GLN GLN A . n A 1 64 GLU 64 83 83 GLU GLU A . n A 1 65 VAL 65 84 84 VAL VAL A . n A 1 66 LYS 66 85 85 LYS LYS A . n A 1 67 LEU 67 86 86 LEU LEU A . n A 1 68 GLU 68 87 87 GLU GLU A . n A 1 69 ASN 69 88 88 ASN ASN A . n A 1 70 VAL 70 89 89 VAL VAL A . n A 1 71 THR 71 90 90 THR THR A . n A 1 72 GLU 72 91 91 GLU GLU A . n A 1 73 ASN 73 92 92 ASN ASN A . n A 1 74 PHE 74 93 93 PHE PHE A . n A 1 75 ASN 75 94 94 ASN ASN A . n A 1 76 MET 76 95 95 MET MET A . n A 1 77 TRP 77 96 96 TRP TRP A . n A 1 78 LYS 78 97 97 LYS LYS A . n A 1 79 ASN 79 98 98 ASN ASN A . n A 1 80 ASN 80 99 99 ASN ASN A . n A 1 81 MET 81 100 100 MET MET A . n A 1 82 VAL 82 101 101 VAL VAL A . n A 1 83 GLU 83 102 102 GLU GLU A . n A 1 84 GLN 84 103 103 GLN GLN A . n A 1 85 MET 85 104 104 MET MET A . n A 1 86 HIS 86 105 105 HIS HIS A . n A 1 87 GLU 87 106 106 GLU GLU A . n A 1 88 ASP 88 107 107 ASP ASP A . n A 1 89 ILE 89 108 108 ILE ILE A . n A 1 90 ILE 90 109 109 ILE ILE A . n A 1 91 SER 91 110 110 SER SER A . n A 1 92 LEU 92 111 111 LEU LEU A . n A 1 93 TRP 93 112 112 TRP TRP A . n A 1 94 ASP 94 113 113 ASP ASP A . n A 1 95 GLN 95 114 114 GLN GLN A . n A 1 96 SER 96 115 115 SER SER A . n A 1 97 LEU 97 116 116 LEU LEU A . n A 1 98 LYS 98 117 117 LYS LYS A . n A 1 99 PRO 99 118 118 PRO PRO A . n A 1 100 CYS 100 119 119 CYS CYS A . n A 1 101 VAL 101 120 120 VAL VAL A . n A 1 102 LYS 102 121 121 LYS LYS A . n A 1 103 LEU 103 122 122 LEU LEU A . n A 1 104 THR 104 123 123 THR THR A . n A 1 105 GLY 105 124 124 GLY GLY A . n A 1 106 GLY 106 198 198 GLY GLY A . n A 1 107 SER 107 199 199 SER SER A . n A 1 108 VAL 108 200 200 VAL VAL A . n A 1 109 ILE 109 201 201 ILE ILE A . n A 1 110 THR 110 202 202 THR THR A . n A 1 111 GLN 111 203 203 GLN GLN A . n A 1 112 ALA 112 204 204 ALA ALA A . n A 1 113 CYS 113 205 205 CYS CYS A . n A 1 114 PRO 114 206 206 PRO PRO A . n A 1 115 LYS 115 207 207 LYS LYS A . n A 1 116 VAL 116 208 208 VAL VAL A . n A 1 117 SER 117 209 209 SER SER A . n A 1 118 PHE 118 210 210 PHE PHE A . n A 1 119 GLU 119 211 211 GLU GLU A . n A 1 120 PRO 120 212 212 PRO PRO A . n A 1 121 ILE 121 213 213 ILE ILE A . n A 1 122 PRO 122 214 214 PRO PRO A . n A 1 123 ILE 123 215 215 ILE ILE A . n A 1 124 HIS 124 216 216 HIS HIS A . n A 1 125 TYR 125 217 217 TYR TYR A . n A 1 126 CYS 126 218 218 CYS CYS A . n A 1 127 ALA 127 219 219 ALA ALA A . n A 1 128 PRO 128 220 220 PRO PRO A . n A 1 129 ALA 129 221 221 ALA ALA A . n A 1 130 GLY 130 222 222 GLY GLY A . n A 1 131 PHE 131 223 223 PHE PHE A . n A 1 132 ALA 132 224 224 ALA ALA A . n A 1 133 ILE 133 225 225 ILE ILE A . n A 1 134 LEU 134 226 226 LEU LEU A . n A 1 135 LYS 135 227 227 LYS LYS A . n A 1 136 CYS 136 228 228 CYS CYS A . n A 1 137 ASN 137 229 229 ASN ASN A . n A 1 138 ASP 138 230 230 ASP ASP A . n A 1 139 LYS 139 231 231 LYS LYS A . n A 1 140 LYS 140 232 232 LYS LYS A . n A 1 141 PHE 141 233 233 PHE PHE A . n A 1 142 ASN 142 234 234 ASN ASN A . n A 1 143 GLY 143 235 235 GLY GLY A . n A 1 144 THR 144 236 236 THR THR A . n A 1 145 GLY 145 237 237 GLY GLY A . n A 1 146 PRO 146 238 238 PRO PRO A . n A 1 147 CYS 147 239 239 CYS CYS A . n A 1 148 THR 148 240 240 THR THR A . n A 1 149 ASN 149 241 241 ASN ASN A . n A 1 150 VAL 150 242 242 VAL VAL A . n A 1 151 SER 151 243 243 SER SER A . n A 1 152 THR 152 244 244 THR THR A . n A 1 153 VAL 153 245 245 VAL VAL A . n A 1 154 GLN 154 246 246 GLN GLN A . n A 1 155 CYS 155 247 247 CYS CYS A . n A 1 156 THR 156 248 248 THR THR A . n A 1 157 HIS 157 249 249 HIS HIS A . n A 1 158 GLY 158 250 250 GLY GLY A . n A 1 159 ILE 159 251 251 ILE ILE A . n A 1 160 ARG 160 252 252 ARG ARG A . n A 1 161 PRO 161 253 253 PRO PRO A . n A 1 162 VAL 162 254 254 VAL VAL A . n A 1 163 VAL 163 255 255 VAL VAL A . n A 1 164 SER 164 256 256 SER SER A . n A 1 165 THR 165 257 257 THR THR A . n A 1 166 GLN 166 258 258 GLN GLN A . n A 1 167 LEU 167 259 259 LEU LEU A . n A 1 168 LEU 168 260 260 LEU LEU A . n A 1 169 LEU 169 261 261 LEU LEU A . n A 1 170 ASN 170 262 262 ASN ASN A . n A 1 171 GLY 171 263 263 GLY GLY A . n A 1 172 SER 172 264 264 SER SER A . n A 1 173 LEU 173 265 265 LEU LEU A . n A 1 174 ALA 174 266 266 ALA ALA A . n A 1 175 GLU 175 267 267 GLU GLU A . n A 1 176 GLU 176 268 268 GLU GLU A . n A 1 177 GLU 177 269 269 GLU GLU A . n A 1 178 ILE 178 270 270 ILE ILE A . n A 1 179 VAL 179 271 271 VAL VAL A . n A 1 180 ILE 180 272 272 ILE ILE A . n A 1 181 ARG 181 273 273 ARG ARG A . n A 1 182 SER 182 274 274 SER SER A . n A 1 183 GLU 183 275 275 GLU GLU A . n A 1 184 ASN 184 276 276 ASN ASN A . n A 1 185 PHE 185 277 277 PHE PHE A . n A 1 186 THR 186 278 278 THR THR A . n A 1 187 ASN 187 279 279 ASN ASN A . n A 1 188 ASN 188 280 280 ASN ASN A . n A 1 189 ALA 189 281 281 ALA ALA A . n A 1 190 LYS 190 282 282 LYS LYS A . n A 1 191 THR 191 283 283 THR THR A . n A 1 192 ILE 192 284 284 ILE ILE A . n A 1 193 ILE 193 285 285 ILE ILE A . n A 1 194 VAL 194 286 286 VAL VAL A . n A 1 195 GLN 195 287 287 GLN GLN A . n A 1 196 LEU 196 288 288 LEU LEU A . n A 1 197 ASN 197 289 289 ASN ASN A . n A 1 198 GLU 198 290 290 GLU GLU A . n A 1 199 SER 199 291 291 SER SER A . n A 1 200 VAL 200 292 292 VAL VAL A . n A 1 201 VAL 201 293 293 VAL VAL A . n A 1 202 ILE 202 294 294 ILE ILE A . n A 1 203 ASN 203 295 295 ASN ASN A . n A 1 204 CYS 204 296 296 CYS CYS A . n A 1 205 THR 205 297 297 THR THR A . n A 1 206 ARG 206 298 298 ARG ARG A . n A 1 207 PRO 207 299 299 PRO PRO A . n A 1 208 ASN 208 300 300 ASN ASN A . n A 1 209 ASN 209 301 301 ASN ASN A . n A 1 210 GLY 210 318 ? ? ? A . n A 1 211 GLY 211 319 ? ? ? A . n A 1 212 SER 212 320 ? ? ? A . n A 1 213 GLY 213 321 ? ? ? A . n A 1 214 SER 214 322 ? ? ? A . n A 1 215 GLY 215 323 ? ? ? A . n A 1 216 GLY 216 324 ? ? ? A . n A 1 217 ASP 217 325 325 ASP ASP A . n A 1 218 ILE 218 326 326 ILE ILE A . n A 1 219 ARG 219 327 327 ARG ARG A . n A 1 220 GLN 220 328 328 GLN GLN A . n A 1 221 ALA 221 329 329 ALA ALA A . n A 1 222 HIS 222 330 330 HIS HIS A . n A 1 223 CYS 223 331 331 CYS CYS A . n A 1 224 ASN 224 332 332 ASN ASN A . n A 1 225 LEU 225 333 333 LEU LEU A . n A 1 226 SER 226 334 334 SER SER A . n A 1 227 LYS 227 335 335 LYS LYS A . n A 1 228 THR 228 336 336 THR THR A . n A 1 229 GLN 229 337 337 GLN GLN A . n A 1 230 TRP 230 338 338 TRP TRP A . n A 1 231 GLU 231 339 339 GLU GLU A . n A 1 232 ASN 232 340 340 ASN ASN A . n A 1 233 THR 233 341 341 THR THR A . n A 1 234 LEU 234 342 342 LEU LEU A . n A 1 235 GLU 235 343 343 GLU GLU A . n A 1 236 GLN 236 344 344 GLN GLN A . n A 1 237 ILE 237 345 345 ILE ILE A . n A 1 238 ALA 238 346 346 ALA ALA A . n A 1 239 ILE 239 347 347 ILE ILE A . n A 1 240 LYS 240 348 348 LYS LYS A . n A 1 241 LEU 241 349 349 LEU LEU A . n A 1 242 LYS 242 350 350 LYS LYS A . n A 1 243 GLU 243 351 351 GLU GLU A . n A 1 244 GLN 244 352 352 GLN GLN A . n A 1 245 PHE 245 353 353 PHE PHE A . n A 1 246 GLY 246 354 354 GLY GLY A . n A 1 247 ASN 247 355 355 ASN ASN A . n A 1 248 ASN 248 356 356 ASN ASN A . n A 1 249 LYS 249 357 357 LYS LYS A . n A 1 250 THR 250 358 358 THR THR A . n A 1 251 ILE 251 359 359 ILE ILE A . n A 1 252 ILE 252 360 360 ILE ILE A . n A 1 253 PHE 253 361 361 PHE PHE A . n A 1 254 ASN 254 362 362 ASN ASN A . n A 1 255 PRO 255 363 363 PRO PRO A . n A 1 256 SER 256 364 364 SER SER A . n A 1 257 SER 257 365 365 SER SER A . n A 1 258 GLY 258 366 366 GLY GLY A . n A 1 259 GLY 259 367 367 GLY GLY A . n A 1 260 ASP 260 368 368 ASP ASP A . n A 1 261 PRO 261 369 369 PRO PRO A . n A 1 262 GLU 262 370 370 GLU GLU A . n A 1 263 ILE 263 371 371 ILE ILE A . n A 1 264 VAL 264 372 372 VAL VAL A . n A 1 265 THR 265 373 373 THR THR A . n A 1 266 HIS 266 374 374 HIS HIS A . n A 1 267 SER 267 375 375 SER SER A . n A 1 268 PHE 268 376 376 PHE PHE A . n A 1 269 ASN 269 377 377 ASN ASN A . n A 1 270 CYS 270 378 378 CYS CYS A . n A 1 271 GLY 271 379 379 GLY GLY A . n A 1 272 GLY 272 380 380 GLY GLY A . n A 1 273 GLU 273 381 381 GLU GLU A . n A 1 274 PHE 274 382 382 PHE PHE A . n A 1 275 PHE 275 383 383 PHE PHE A . n A 1 276 TYR 276 384 384 TYR TYR A . n A 1 277 CYS 277 385 385 CYS CYS A . n A 1 278 ASN 278 386 386 ASN ASN A . n A 1 279 SER 279 387 387 SER SER A . n A 1 280 THR 280 388 388 THR THR A . n A 1 281 GLN 281 389 389 GLN GLN A . n A 1 282 LEU 282 390 390 LEU LEU A . n A 1 283 PHE 283 391 391 PHE PHE A . n A 1 284 THR 284 392 392 THR THR A . n A 1 285 TRP 285 393 393 TRP TRP A . n A 1 286 ASN 286 394 394 ASN ASN A . n A 1 287 ASP 287 395 395 ASP ASP A . n A 1 288 THR 288 396 396 THR THR A . n A 1 289 ARG 289 405 ? ? ? A . n A 1 290 LYS 290 406 ? ? ? A . n A 1 291 LEU 291 407 ? ? ? A . n A 1 292 ASN 292 408 ? ? ? A . n A 1 293 ASN 293 409 ? ? ? A . n A 1 294 THR 294 410 ? ? ? A . n A 1 295 GLY 295 411 411 GLY GLY A . n A 1 296 ARG 296 412 412 ARG ARG A . n A 1 297 ASN 297 413 413 ASN ASN A . n A 1 298 ILE 298 414 414 ILE ILE A . n A 1 299 THR 299 415 415 THR THR A . n A 1 300 LEU 300 416 416 LEU LEU A . n A 1 301 PRO 301 417 417 PRO PRO A . n A 1 302 CYS 302 418 418 CYS CYS A . n A 1 303 ARG 303 419 419 ARG ARG A . n A 1 304 ILE 304 420 420 ILE ILE A . n A 1 305 LYS 305 421 421 LYS LYS A . n A 1 306 GLN 306 422 422 GLN GLN A . n A 1 307 ILE 307 423 423 ILE ILE A . n A 1 308 ILE 308 424 424 ILE ILE A . n A 1 309 ASN 309 425 425 ASN ASN A . n A 1 310 MET 310 426 426 MET MET A . n A 1 311 TRP 311 427 427 TRP TRP A . n A 1 312 GLN 312 428 428 GLN GLN A . n A 1 313 GLU 313 429 429 GLU GLU A . n A 1 314 VAL 314 430 430 VAL VAL A . n A 1 315 GLY 315 431 431 GLY GLY A . n A 1 316 LYS 316 432 432 LYS LYS A . n A 1 317 ALA 317 433 433 ALA ALA A . n A 1 318 MET 318 434 434 MET MET A . n A 1 319 TYR 319 435 435 TYR TYR A . n A 1 320 ALA 320 436 436 ALA ALA A . n A 1 321 PRO 321 437 437 PRO PRO A . n A 1 322 PRO 322 438 438 PRO PRO A . n A 1 323 ILE 323 439 439 ILE ILE A . n A 1 324 ARG 324 440 440 ARG ARG A . n A 1 325 GLY 325 441 441 GLY GLY A . n A 1 326 GLN 326 442 442 GLN GLN A . n A 1 327 ILE 327 443 443 ILE ILE A . n A 1 328 ARG 328 444 444 ARG ARG A . n A 1 329 CYS 329 445 445 CYS CYS A . n A 1 330 SER 330 446 446 SER SER A . n A 1 331 SER 331 447 447 SER SER A . n A 1 332 ASN 332 448 448 ASN ASN A . n A 1 333 ILE 333 449 449 ILE ILE A . n A 1 334 THR 334 450 450 THR THR A . n A 1 335 GLY 335 451 451 GLY GLY A . n A 1 336 LEU 336 452 452 LEU LEU A . n A 1 337 LEU 337 453 453 LEU LEU A . n A 1 338 LEU 338 454 454 LEU LEU A . n A 1 339 THR 339 455 455 THR THR A . n A 1 340 ARG 340 456 456 ARG ARG A . n A 1 341 ASP 341 457 457 ASP ASP A . n A 1 342 GLY 342 458 458 GLY GLY A . n A 1 343 GLY 343 459 459 GLY GLY A . n A 1 344 LYS 344 460 460 LYS ALA A . n A 1 345 ASP 345 461 ? ? ? A . n A 1 346 THR 346 462 ? ? ? A . n A 1 347 ASN 347 463 463 ASN ASN A . n A 1 348 GLY 348 464 464 GLY GLY A . n A 1 349 THR 349 465 465 THR THR A . n A 1 350 GLU 350 466 466 GLU GLU A . n A 1 351 ILE 351 467 467 ILE ILE A . n A 1 352 PHE 352 468 468 PHE PHE A . n A 1 353 ARG 353 469 469 ARG ARG A . n A 1 354 PRO 354 470 470 PRO PRO A . n A 1 355 GLY 355 471 471 GLY GLY A . n A 1 356 GLY 356 472 472 GLY GLY A . n A 1 357 GLY 357 473 473 GLY GLY A . n A 1 358 ASP 358 474 474 ASP ASP A . n A 1 359 MET 359 475 475 MET MET A . n A 1 360 ARG 360 476 476 ARG ARG A . n A 1 361 ASP 361 477 477 ASP ASP A . n A 1 362 ASN 362 478 478 ASN ASN A . n A 1 363 TRP 363 479 479 TRP TRP A . n A 1 364 ARG 364 480 480 ARG ARG A . n A 1 365 SER 365 481 481 SER SER A . n A 1 366 GLU 366 482 482 GLU GLU A . n A 1 367 LEU 367 483 483 LEU LEU A . n A 1 368 TYR 368 484 484 TYR TYR A . n A 1 369 LYS 369 485 485 LYS LYS A . n A 1 370 TYR 370 486 486 TYR TYR A . n A 1 371 LYS 371 487 487 LYS LYS A . n A 1 372 VAL 372 488 488 VAL VAL A . n A 1 373 VAL 373 489 489 VAL VAL A . n A 1 374 LYS 374 490 490 LYS LYS A . n A 1 375 ILE 375 491 491 ILE ILE A . n A 1 376 GLU 376 492 492 GLU GLU A . n B 2 1 MPT 1 1 1 MPT MPT R . n B 2 2 ASN 2 2 2 ASN ASN R . n B 2 3 LEU 3 3 3 LEU LEU R . n B 2 4 HIS 4 4 4 HIS HIS R . n B 2 5 PHE 5 5 5 PHE PHE R . n B 2 6 CYS 6 6 6 CYS CYS R . n B 2 7 GLN 7 7 7 GLN GLN R . n B 2 8 LEU 8 8 8 LEU LEU R . n B 2 9 ARG 9 9 9 ARG ARG R . n B 2 10 CYS 10 10 10 CYS CYS R . n B 2 11 LYS 11 11 11 LYS LYS R . n B 2 12 SER 12 12 12 SER SER R . n B 2 13 LEU 13 13 13 LEU LEU R . n B 2 14 GLY 14 14 14 GLY GLY R . n B 2 15 LEU 15 15 15 LEU LEU R . n B 2 16 LEU 16 16 16 LEU LEU R . n B 2 17 GLY 17 17 17 GLY GLY R . n B 2 18 ARG 18 18 18 ARG ARG R . n B 2 19 CYS 19 19 19 CYS CYS R . n B 2 20 ALA 20 20 20 ALA ALA R . n B 2 21 DPR 21 21 21 DPR DPR R . n B 2 22 THR 22 22 22 THR THR R . n B 2 23 1OP 23 23 23 1OP 1OP R . n B 2 24 CYS 24 24 24 CYS CYS R . n B 2 25 ALA 25 25 25 ALA ALA R . n B 2 26 CYS 26 26 26 CYS CYS R . n B 2 27 VAL 27 27 27 VAL VAL R . n B 2 28 NH2 28 28 28 NH2 NH2 R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 501 501 NAG NAG A . D 3 NAG 1 502 502 NAG NAG A . E 3 NAG 1 503 503 NAG NAG A . F 3 NAG 1 504 504 NAG NAG A . G 3 NAG 1 505 505 NAG NAG A . H 3 NAG 1 506 506 NAG NAG A . I 3 NAG 1 507 507 NAG NAG A . J 3 NAG 1 508 509 NAG NAG A . K 4 IPA 1 509 4571 IPA IPA A . L 4 IPA 1 510 4572 IPA IPA A . M 4 IPA 1 511 4573 IPA IPA A . N 4 IPA 1 512 4574 IPA IPA A . O 5 FLC 1 513 3585 FLC FLC A . P 6 HOH 1 601 1 HOH HOH A . P 6 HOH 2 602 2 HOH HOH A . P 6 HOH 3 603 3 HOH HOH A . P 6 HOH 4 604 4 HOH HOH A . P 6 HOH 5 605 5 HOH HOH A . P 6 HOH 6 606 6 HOH HOH A . P 6 HOH 7 607 7 HOH HOH A . P 6 HOH 8 608 8 HOH HOH A . P 6 HOH 9 609 9 HOH HOH A . P 6 HOH 10 610 10 HOH HOH A . P 6 HOH 11 611 11 HOH HOH A . P 6 HOH 12 612 12 HOH HOH A . P 6 HOH 13 613 13 HOH HOH A . P 6 HOH 14 614 14 HOH HOH A . P 6 HOH 15 615 15 HOH HOH A . P 6 HOH 16 616 16 HOH HOH A . P 6 HOH 17 617 17 HOH HOH A . P 6 HOH 18 618 18 HOH HOH A . P 6 HOH 19 619 19 HOH HOH A . P 6 HOH 20 620 20 HOH HOH A . P 6 HOH 21 621 21 HOH HOH A . P 6 HOH 22 622 22 HOH HOH A . P 6 HOH 23 623 23 HOH HOH A . P 6 HOH 24 624 24 HOH HOH A . P 6 HOH 25 625 25 HOH HOH A . P 6 HOH 26 626 26 HOH HOH A . P 6 HOH 27 627 27 HOH HOH A . P 6 HOH 28 628 28 HOH HOH A . P 6 HOH 29 629 29 HOH HOH A . P 6 HOH 30 630 30 HOH HOH A . P 6 HOH 31 631 31 HOH HOH A . P 6 HOH 32 632 32 HOH HOH A . P 6 HOH 33 633 33 HOH HOH A . P 6 HOH 34 634 34 HOH HOH A . P 6 HOH 35 635 35 HOH HOH A . P 6 HOH 36 636 36 HOH HOH A . P 6 HOH 37 637 37 HOH HOH A . P 6 HOH 38 638 38 HOH HOH A . P 6 HOH 39 639 39 HOH HOH A . P 6 HOH 40 640 40 HOH HOH A . P 6 HOH 41 641 41 HOH HOH A . P 6 HOH 42 642 42 HOH HOH A . P 6 HOH 43 643 43 HOH HOH A . P 6 HOH 44 644 44 HOH HOH A . P 6 HOH 45 645 45 HOH HOH A . P 6 HOH 46 646 46 HOH HOH A . P 6 HOH 47 647 47 HOH HOH A . P 6 HOH 48 648 48 HOH HOH A . P 6 HOH 49 649 49 HOH HOH A . P 6 HOH 50 650 50 HOH HOH A . P 6 HOH 51 651 51 HOH HOH A . P 6 HOH 52 652 52 HOH HOH A . P 6 HOH 53 653 53 HOH HOH A . P 6 HOH 54 654 54 HOH HOH A . P 6 HOH 55 655 55 HOH HOH A . P 6 HOH 56 656 56 HOH HOH A . P 6 HOH 57 657 57 HOH HOH A . P 6 HOH 58 658 58 HOH HOH A . P 6 HOH 59 659 59 HOH HOH A . P 6 HOH 60 660 60 HOH HOH A . P 6 HOH 61 661 61 HOH HOH A . P 6 HOH 62 662 62 HOH HOH A . P 6 HOH 63 663 63 HOH HOH A . P 6 HOH 64 664 64 HOH HOH A . P 6 HOH 65 665 65 HOH HOH A . P 6 HOH 66 666 66 HOH HOH A . P 6 HOH 67 667 67 HOH HOH A . P 6 HOH 68 668 68 HOH HOH A . P 6 HOH 69 669 69 HOH HOH A . P 6 HOH 70 670 70 HOH HOH A . P 6 HOH 71 671 71 HOH HOH A . P 6 HOH 72 672 72 HOH HOH A . P 6 HOH 73 673 73 HOH HOH A . P 6 HOH 74 674 74 HOH HOH A . P 6 HOH 75 675 75 HOH HOH A . P 6 HOH 76 676 76 HOH HOH A . P 6 HOH 77 677 77 HOH HOH A . P 6 HOH 78 678 78 HOH HOH A . P 6 HOH 79 679 79 HOH HOH A . P 6 HOH 80 680 80 HOH HOH A . P 6 HOH 81 681 82 HOH HOH A . P 6 HOH 82 682 84 HOH HOH A . P 6 HOH 83 683 85 HOH HOH A . P 6 HOH 84 684 86 HOH HOH A . P 6 HOH 85 685 87 HOH HOH A . P 6 HOH 86 686 88 HOH HOH A . P 6 HOH 87 687 89 HOH HOH A . P 6 HOH 88 688 90 HOH HOH A . P 6 HOH 89 689 91 HOH HOH A . P 6 HOH 90 690 92 HOH HOH A . P 6 HOH 91 691 93 HOH HOH A . P 6 HOH 92 692 95 HOH HOH A . P 6 HOH 93 693 96 HOH HOH A . P 6 HOH 94 694 97 HOH HOH A . P 6 HOH 95 695 98 HOH HOH A . P 6 HOH 96 696 99 HOH HOH A . P 6 HOH 97 697 100 HOH HOH A . P 6 HOH 98 698 101 HOH HOH A . P 6 HOH 99 699 102 HOH HOH A . P 6 HOH 100 700 103 HOH HOH A . P 6 HOH 101 701 104 HOH HOH A . P 6 HOH 102 702 105 HOH HOH A . P 6 HOH 103 703 106 HOH HOH A . P 6 HOH 104 704 107 HOH HOH A . P 6 HOH 105 705 108 HOH HOH A . P 6 HOH 106 706 109 HOH HOH A . P 6 HOH 107 707 110 HOH HOH A . P 6 HOH 108 708 111 HOH HOH A . P 6 HOH 109 709 112 HOH HOH A . P 6 HOH 110 710 113 HOH HOH A . P 6 HOH 111 711 114 HOH HOH A . P 6 HOH 112 712 115 HOH HOH A . P 6 HOH 113 713 116 HOH HOH A . P 6 HOH 114 714 117 HOH HOH A . P 6 HOH 115 715 118 HOH HOH A . P 6 HOH 116 716 119 HOH HOH A . P 6 HOH 117 717 120 HOH HOH A . P 6 HOH 118 718 121 HOH HOH A . P 6 HOH 119 719 122 HOH HOH A . P 6 HOH 120 720 123 HOH HOH A . P 6 HOH 121 721 124 HOH HOH A . P 6 HOH 122 722 125 HOH HOH A . P 6 HOH 123 723 126 HOH HOH A . P 6 HOH 124 724 127 HOH HOH A . P 6 HOH 125 725 128 HOH HOH A . P 6 HOH 126 726 129 HOH HOH A . P 6 HOH 127 727 130 HOH HOH A . P 6 HOH 128 728 131 HOH HOH A . P 6 HOH 129 729 132 HOH HOH A . P 6 HOH 130 730 133 HOH HOH A . P 6 HOH 131 731 134 HOH HOH A . P 6 HOH 132 732 135 HOH HOH A . P 6 HOH 133 733 136 HOH HOH A . P 6 HOH 134 734 137 HOH HOH A . P 6 HOH 135 735 138 HOH HOH A . P 6 HOH 136 736 139 HOH HOH A . P 6 HOH 137 737 140 HOH HOH A . P 6 HOH 138 738 141 HOH HOH A . P 6 HOH 139 739 142 HOH HOH A . P 6 HOH 140 740 143 HOH HOH A . P 6 HOH 141 741 144 HOH HOH A . P 6 HOH 142 742 146 HOH HOH A . P 6 HOH 143 743 147 HOH HOH A . P 6 HOH 144 744 148 HOH HOH A . P 6 HOH 145 745 149 HOH HOH A . P 6 HOH 146 746 150 HOH HOH A . P 6 HOH 147 747 151 HOH HOH A . Q 6 HOH 1 101 81 HOH HOH R . Q 6 HOH 2 102 83 HOH HOH R . Q 6 HOH 3 103 94 HOH HOH R . Q 6 HOH 4 104 145 HOH HOH R . # _pdbx_molecule_features.prd_id PRD_001099 _pdbx_molecule_features.name 'CD4-MIMETIC MINIPROTEIN M48U7' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001099 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 203 A ASN 295 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 278 A ASN 386 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 197 A ASN 289 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 170 A ASN 262 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 184 A ASN 276 ? ASN 'GLYCOSYLATION SITE' 6 A ASN 142 A ASN 234 ? ASN 'GLYCOSYLATION SITE' 7 A ASN 332 A ASN 448 ? ASN 'GLYCOSYLATION SITE' 8 A ASN 149 A ASN 241 ? ASN 'GLYCOSYLATION SITE' 9 B 1OP 23 R 1OP 23 ? TYR 'O-(5-HYDROXYPENTYL)-L-TYROSINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-06-12 2 'Structure model' 1 1 2013-07-10 3 'Structure model' 1 2 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.pdbx_role' 8 3 'Structure model' '_struct_conn.pdbx_value_order' 9 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 10 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.5636 23.3944 -0.7992 0.3183 0.2693 0.2201 0.0038 0.0240 -0.0271 1.6289 1.4729 1.2515 -0.1126 0.1385 -0.3994 -0.0526 0.0336 -0.1234 -0.0367 0.0310 -0.0260 0.0665 -0.0753 0.0214 'X-RAY DIFFRACTION' 2 ? refined -21.8860 31.8320 15.1615 0.6729 0.8054 0.3820 0.1879 0.0478 -0.0305 5.8286 5.8996 5.6205 -1.0388 -3.0210 0.7746 -0.1038 -0.9419 0.5365 1.4589 0.1859 0.3687 -0.9641 -1.4642 -0.1095 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain R' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4K0A _pdbx_entry_details.compound_details ;THE CD4-MIMETIC MINIPROTEINS INHIBIT HIV-1 ENTRY AND ARE DERIVED FROM SCYLLATOXIN (A SCORPION TOXIN) BY TRANSPLANTING THE GP120-INTERACTIVE REGION OF CD4 ONTO THE SCYLLATOXIN SCAFFOLD, FOLLOWED BY MANY ROUNDS OF ITERATIVE OPTIMIZATION ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 234 ? ? O5 A NAG 502 ? ? 1.74 2 1 ND2 A ASN 241 ? ? O5 A NAG 503 ? ? 1.86 3 1 ND2 A ASN 386 ? ? O5 A NAG 507 ? ? 1.99 4 1 OG1 A THR 388 ? ? O A HOH 728 ? ? 2.01 5 1 NZ A LYS 485 ? ? O A HOH 724 ? ? 2.14 6 1 N A ASP 325 ? ? O A HOH 735 ? ? 2.17 7 1 CG A ASN 386 ? ? C1 A NAG 507 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 205 ? ? -119.62 65.98 2 1 GLN A 258 ? ? 68.55 -61.96 3 1 GLU A 268 ? ? -82.77 -73.99 4 1 ASN A 276 ? ? -162.06 99.77 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id MPT _pdbx_validate_main_chain_plane.auth_asym_id R _pdbx_validate_main_chain_plane.auth_seq_id 1 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 25.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 396 ? CB ? A THR 288 CB 2 1 Y 1 A THR 396 ? OG1 ? A THR 288 OG1 3 1 Y 1 A THR 396 ? CG2 ? A THR 288 CG2 4 1 Y 1 A LYS 460 ? CG ? A LYS 344 CG 5 1 Y 1 A LYS 460 ? CD ? A LYS 344 CD 6 1 Y 1 A LYS 460 ? CE ? A LYS 344 CE 7 1 Y 1 A LYS 460 ? NZ ? A LYS 344 NZ 8 1 Y 1 A ASN 463 ? CG ? A ASN 347 CG 9 1 Y 1 A ASN 463 ? OD1 ? A ASN 347 OD1 10 1 Y 1 A ASN 463 ? ND2 ? A ASN 347 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 20 ? A MET 1 2 1 Y 1 A PRO 21 ? A PRO 2 3 1 Y 1 A MET 22 ? A MET 3 4 1 Y 1 A GLY 23 ? A GLY 4 5 1 Y 1 A SER 24 ? A SER 5 6 1 Y 1 A LEU 25 ? A LEU 6 7 1 Y 1 A GLN 26 ? A GLN 7 8 1 Y 1 A PRO 27 ? A PRO 8 9 1 Y 1 A LEU 28 ? A LEU 9 10 1 Y 1 A ALA 29 ? A ALA 10 11 1 Y 1 A THR 30 ? A THR 11 12 1 Y 1 A LEU 31 ? A LEU 12 13 1 Y 1 A TYR 32 ? A TYR 13 14 1 Y 1 A LEU 33 ? A LEU 14 15 1 Y 1 A LEU 34 ? A LEU 15 16 1 Y 1 A GLY 35 ? A GLY 16 17 1 Y 1 A MET 36 ? A MET 17 18 1 Y 1 A LEU 37 ? A LEU 18 19 1 Y 1 A VAL 38 ? A VAL 19 20 1 Y 1 A ALA 39 ? A ALA 20 21 1 Y 1 A SER 40 ? A SER 21 22 1 Y 1 A VAL 41 ? A VAL 22 23 1 Y 1 A LEU 42 ? A LEU 23 24 1 Y 1 A ALA 43 ? A ALA 24 25 1 Y 1 A GLY 318 ? A GLY 210 26 1 Y 1 A GLY 319 ? A GLY 211 27 1 Y 1 A SER 320 ? A SER 212 28 1 Y 1 A GLY 321 ? A GLY 213 29 1 Y 1 A SER 322 ? A SER 214 30 1 Y 1 A GLY 323 ? A GLY 215 31 1 Y 1 A GLY 324 ? A GLY 216 32 1 Y 1 A ARG 405 ? A ARG 289 33 1 Y 1 A LYS 406 ? A LYS 290 34 1 Y 1 A LEU 407 ? A LEU 291 35 1 Y 1 A ASN 408 ? A ASN 292 36 1 Y 1 A ASN 409 ? A ASN 293 37 1 Y 1 A THR 410 ? A THR 294 38 1 Y 1 A ASP 461 ? A ASP 345 39 1 Y 1 A THR 462 ? A THR 346 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'ISOPROPYL ALCOHOL' IPA 5 'CITRATE ANION' FLC 6 water HOH #