data_4K3F # _entry.id 4K3F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4K3F pdb_00004k3f 10.2210/pdb4k3f/pdb RCSB RCSB078841 ? ? WWPDB D_1000078841 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417287 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4K3F _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-04-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4K3F _cell.length_a 99.577 _cell.length_b 40.509 _cell.length_c 60.813 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4K3F _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable TonB-dependent receptor' 26221.766 1 ? ? ? ? 2 non-polymer syn SELENOMETHIONINE 196.106 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 6 water nat water 18.015 257 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGV HIEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPR VLTQVD(MSE)ALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDA(MSE)QKLAKALHSAEIKQFIQEKY KGAVVPAF ; _entity_poly.pdbx_seq_one_letter_code_can ;GAESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGV HIEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPR VLTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDAMQKLAKALHSAEIKQFIQEKYKGAVVPAF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-417287 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 GLU n 1 4 SER n 1 5 LEU n 1 6 THR n 1 7 VAL n 1 8 ALA n 1 9 ALA n 1 10 THR n 1 11 PRO n 1 12 VAL n 1 13 PRO n 1 14 HIS n 1 15 ALA n 1 16 GLU n 1 17 ILE n 1 18 LEU n 1 19 ASN n 1 20 VAL n 1 21 VAL n 1 22 LYS n 1 23 PRO n 1 24 LEU n 1 25 LEU n 1 26 ALA n 1 27 LYS n 1 28 GLU n 1 29 GLY n 1 30 VAL n 1 31 ASP n 1 32 LEU n 1 33 LYS n 1 34 ILE n 1 35 LYS n 1 36 GLU n 1 37 PHE n 1 38 THR n 1 39 ASP n 1 40 TYR n 1 41 VAL n 1 42 GLN n 1 43 PRO n 1 44 ASN n 1 45 VAL n 1 46 GLN n 1 47 VAL n 1 48 SER n 1 49 GLU n 1 50 LYS n 1 51 ARG n 1 52 LEU n 1 53 ASP n 1 54 ALA n 1 55 ASN n 1 56 PHE n 1 57 PHE n 1 58 GLN n 1 59 HIS n 1 60 GLN n 1 61 PRO n 1 62 TYR n 1 63 LEU n 1 64 ASP n 1 65 GLU n 1 66 PHE n 1 67 ASN n 1 68 LYS n 1 69 ALA n 1 70 LYS n 1 71 GLY n 1 72 THR n 1 73 ASP n 1 74 LEU n 1 75 VAL n 1 76 ALA n 1 77 VAL n 1 78 THR n 1 79 GLY n 1 80 VAL n 1 81 HIS n 1 82 ILE n 1 83 GLU n 1 84 PRO n 1 85 LEU n 1 86 GLY n 1 87 ALA n 1 88 TYR n 1 89 SER n 1 90 SER n 1 91 LYS n 1 92 TYR n 1 93 LYS n 1 94 LYS n 1 95 LEU n 1 96 ASP n 1 97 GLU n 1 98 LEU n 1 99 PRO n 1 100 SER n 1 101 GLY n 1 102 ALA n 1 103 THR n 1 104 VAL n 1 105 VAL n 1 106 ILE n 1 107 PRO n 1 108 ASN n 1 109 ASP n 1 110 ALA n 1 111 THR n 1 112 ASN n 1 113 GLY n 1 114 GLY n 1 115 ARG n 1 116 ALA n 1 117 LEU n 1 118 LEU n 1 119 LEU n 1 120 LEU n 1 121 ASP n 1 122 LYS n 1 123 ALA n 1 124 GLY n 1 125 VAL n 1 126 ILE n 1 127 LYS n 1 128 LEU n 1 129 LYS n 1 130 ASP n 1 131 ASN n 1 132 LYS n 1 133 SER n 1 134 ILE n 1 135 THR n 1 136 ALA n 1 137 THR n 1 138 PRO n 1 139 LYS n 1 140 ASP n 1 141 ILE n 1 142 VAL n 1 143 ASP n 1 144 ASN n 1 145 PRO n 1 146 LYS n 1 147 ASN n 1 148 ILE n 1 149 LYS n 1 150 ILE n 1 151 ARG n 1 152 GLU n 1 153 LEU n 1 154 GLU n 1 155 ALA n 1 156 ALA n 1 157 THR n 1 158 LEU n 1 159 PRO n 1 160 ARG n 1 161 VAL n 1 162 LEU n 1 163 THR n 1 164 GLN n 1 165 VAL n 1 166 ASP n 1 167 MSE n 1 168 ALA n 1 169 LEU n 1 170 ILE n 1 171 ASN n 1 172 THR n 1 173 ASN n 1 174 TYR n 1 175 ALA n 1 176 LEU n 1 177 GLU n 1 178 ALA n 1 179 LYS n 1 180 LEU n 1 181 ASN n 1 182 PRO n 1 183 THR n 1 184 LYS n 1 185 ASP n 1 186 ALA n 1 187 LEU n 1 188 ALA n 1 189 ILE n 1 190 GLU n 1 191 GLY n 1 192 SER n 1 193 ASP n 1 194 SER n 1 195 PRO n 1 196 TYR n 1 197 VAL n 1 198 ASN n 1 199 ILE n 1 200 LEU n 1 201 VAL n 1 202 ALA n 1 203 ARG n 1 204 PRO n 1 205 ASP n 1 206 ASN n 1 207 LYS n 1 208 ASP n 1 209 SER n 1 210 ASP n 1 211 ALA n 1 212 MSE n 1 213 GLN n 1 214 LYS n 1 215 LEU n 1 216 ALA n 1 217 LYS n 1 218 ALA n 1 219 LEU n 1 220 HIS n 1 221 SER n 1 222 ALA n 1 223 GLU n 1 224 ILE n 1 225 LYS n 1 226 GLN n 1 227 PHE n 1 228 ILE n 1 229 GLN n 1 230 GLU n 1 231 LYS n 1 232 TYR n 1 233 LYS n 1 234 GLY n 1 235 ALA n 1 236 VAL n 1 237 VAL n 1 238 PRO n 1 239 ALA n 1 240 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PA5505 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HT68_PSEAE _struct_ref.pdbx_db_accession Q9HT68 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGVH IEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPRV LTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDAMQKLAKALHSAEIKQFIQEKYKGAVVPAF ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4K3F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 240 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HT68 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 260 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 260 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4K3F _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9HT68 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4K3F # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '3.20M ammonium sulfate, 0.7% n-Butanol, 0.1M HEPES pH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Rhodium-coated vertical and horizontal focusing mirrors; liquid-nitrogen cooled double crystal Si(111) monochromator' _diffrn_detector.pdbx_collection_date 2013-04-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.8265 1.0 2 0.9794 1.0 3 0.9792 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_wavelength_list 0.8265,0.9794,0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4K3F _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 29.135 _reflns.number_obs 32359 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_netI_over_sigmaI 9.160 _reflns.percent_possible_obs 92.400 _reflns.B_iso_Wilson_estimate 19.747 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.600 1.660 11216 ? 6048 0.467 1.9 ? ? ? ? ? 92.100 1 1 1.660 1.720 9814 ? 5320 0.396 2.3 ? ? ? ? ? 93.300 2 1 1.720 1.800 10914 ? 6029 0.298 3.0 ? ? ? ? ? 93.400 3 1 1.800 1.900 10830 ? 6052 0.231 3.9 ? ? ? ? ? 91.600 4 1 1.900 2.020 11279 ? 5967 0.159 5.6 ? ? ? ? ? 94.500 5 1 2.020 2.170 10712 ? 5667 0.105 8.2 ? ? ? ? ? 93.800 6 1 2.170 2.390 10417 ? 5811 0.074 10.3 ? ? ? ? ? 91.600 7 1 2.390 2.730 11324 ? 5838 0.059 13.0 ? ? ? ? ? 94.000 8 1 2.730 3.440 10814 ? 5764 0.040 17.8 ? ? ? ? ? 91.000 9 1 3.440 ? 11142 ? 5655 0.025 26.4 ? ? ? ? ? 88.900 10 1 # _refine.entry_id 4K3F _refine.ls_d_res_high 1.6000 _refine.ls_d_res_low 29.135 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.0700 _refine.ls_number_reflns_obs 32319 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. SULFATE ION (SO4) AND GLYCEROL (GOL) MOLECULES FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE MODELED. 7. A SELENOMETHIONINE AMINO ACID IS BOUND TO THE PROTEIN. ANOMALOUS DIFFERENCE FOURIER MAP CONFIRMS THIS METHIONINE TO BE SELENOMETHIONINE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1523 _refine.ls_R_factor_R_work 0.1506 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1847 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1641 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.2558 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.9500 _refine.aniso_B[2][2] -0.6800 _refine.aniso_B[3][3] -0.2800 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9740 _refine.correlation_coeff_Fo_to_Fc_free 0.9650 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0790 _refine.pdbx_overall_ESU_R_Free 0.0820 _refine.overall_SU_ML 0.0550 _refine.overall_SU_B 2.9450 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 93.630 _refine.B_iso_min 9.350 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1832 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 257 _refine_hist.number_atoms_total 2139 _refine_hist.d_res_high 1.6000 _refine_hist.d_res_low 29.135 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2004 0.012 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 2013 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2729 1.536 2.013 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4669 0.812 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 261 5.903 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 79 42.163 26.329 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 354 13.063 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 6 15.994 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 326 0.097 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2248 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 386 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1007 1.826 3.077 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1006 1.827 3.078 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1269 2.415 5.766 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.6000 _refine_ls_shell.d_res_low 1.6410 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.3800 _refine_ls_shell.number_reflns_R_work 2242 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2770 _refine_ls_shell.R_factor_R_free 0.3590 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2371 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4K3F _struct.title 'Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Periplasmic methionine binding protein, NLPA lipoprotein, PF03180 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.entry_id 4K3F # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 13 ? LYS A 27 ? PRO A 33 LYS A 47 1 ? 15 HELX_P HELX_P2 2 VAL A 41 ? GLU A 49 ? VAL A 61 GLU A 69 1 ? 9 HELX_P HELX_P3 3 GLN A 60 ? GLY A 71 ? GLN A 80 GLY A 91 1 ? 12 HELX_P HELX_P4 4 LYS A 94 ? LEU A 98 ? LYS A 114 LEU A 118 5 ? 5 HELX_P HELX_P5 5 ASP A 109 ? ALA A 123 ? ASP A 129 ALA A 143 1 ? 15 HELX_P HELX_P6 6 THR A 137 ? LYS A 139 ? THR A 157 LYS A 159 5 ? 3 HELX_P HELX_P7 7 GLU A 154 ? ALA A 156 ? GLU A 174 ALA A 176 5 ? 3 HELX_P HELX_P8 8 THR A 157 ? LEU A 162 ? THR A 177 LEU A 182 1 ? 6 HELX_P HELX_P9 9 THR A 163 ? VAL A 165 ? THR A 183 VAL A 185 5 ? 3 HELX_P HELX_P10 10 ASN A 171 ? ALA A 178 ? ASN A 191 ALA A 198 1 ? 8 HELX_P HELX_P11 11 ASN A 181 ? ALA A 186 ? ASN A 201 ALA A 206 1 ? 6 HELX_P HELX_P12 12 SER A 209 ? LEU A 219 ? SER A 229 LEU A 239 1 ? 11 HELX_P HELX_P13 13 SER A 221 ? LYS A 233 ? SER A 241 LYS A 253 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 166 C ? ? ? 1_555 A MSE 167 N ? ? A ASP 186 A MSE 187 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale2 covale both ? A MSE 167 C ? ? ? 1_555 A ALA 168 N ? ? A MSE 187 A ALA 188 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A ALA 211 C ? ? ? 1_555 A MSE 212 N ? ? A ALA 231 A MSE 232 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale4 covale both ? A MSE 212 C ? ? ? 1_555 A GLN 213 N ? ? A MSE 232 A GLN 233 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 12 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 32 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 13 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 33 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 30 ? GLU A 36 ? VAL A 50 GLU A 56 A 2 GLU A 3 ? ALA A 9 ? GLU A 23 ALA A 29 A 3 ALA A 54 ? HIS A 59 ? ALA A 74 HIS A 79 A 4 ASN A 198 ? ALA A 202 ? ASN A 218 ALA A 222 A 5 VAL A 75 ? ILE A 82 ? VAL A 95 ILE A 102 A 6 VAL A 237 ? PRO A 238 ? VAL A 257 PRO A 258 B 1 LYS A 149 ? LEU A 153 ? LYS A 169 LEU A 173 B 2 THR A 103 ? PRO A 107 ? THR A 123 PRO A 127 B 3 MSE A 167 ? ILE A 170 ? MSE A 187 ILE A 190 B 4 GLY A 86 ? TYR A 88 ? GLY A 106 TYR A 108 B 5 ALA A 188 ? ILE A 189 ? ALA A 208 ILE A 209 C 1 LYS A 127 ? LEU A 128 ? LYS A 147 LEU A 148 C 2 ILE A 141 ? ASP A 143 ? ILE A 161 ASP A 163 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 31 ? O ASP A 51 N GLU A 3 ? N GLU A 23 A 2 3 N ALA A 8 ? N ALA A 28 O PHE A 56 ? O PHE A 76 A 3 4 N ASN A 55 ? N ASN A 75 O VAL A 201 ? O VAL A 221 A 4 5 O ASN A 198 ? O ASN A 218 N HIS A 81 ? N HIS A 101 A 5 6 N ILE A 82 ? N ILE A 102 O VAL A 237 ? O VAL A 257 B 1 2 O ARG A 151 ? O ARG A 171 N VAL A 104 ? N VAL A 124 B 2 3 N VAL A 105 ? N VAL A 125 O MSE A 167 ? O MSE A 187 B 3 4 O ALA A 168 ? O ALA A 188 N TYR A 88 ? N TYR A 108 B 4 5 N ALA A 87 ? N ALA A 107 O ALA A 188 ? O ALA A 208 C 1 2 N LYS A 127 ? N LYS A 147 O VAL A 142 ? O VAL A 162 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 301 ? 5 'BINDING SITE FOR RESIDUE CL A 301' AC2 Software A SO4 302 ? 8 'BINDING SITE FOR RESIDUE SO4 A 302' AC3 Software A SO4 303 ? 3 'BINDING SITE FOR RESIDUE SO4 A 303' AC4 Software A GOL 304 ? 9 'BINDING SITE FOR RESIDUE GOL A 304' AC5 Software A GOL 305 ? 9 'BINDING SITE FOR RESIDUE GOL A 305' AC6 Software A GOL 306 ? 5 'BINDING SITE FOR RESIDUE GOL A 306' AC7 Software A GOL 307 ? 5 'BINDING SITE FOR RESIDUE GOL A 307' AC8 Software A GOL 308 ? 3 'BINDING SITE FOR RESIDUE GOL A 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 48 ? SER A 68 . ? 1_555 ? 2 AC1 5 THR A 72 ? THR A 92 . ? 1_555 ? 3 AC1 5 ASP A 73 ? ASP A 93 . ? 1_555 ? 4 AC1 5 HOH K . ? HOH A 524 . ? 1_555 ? 5 AC1 5 HOH K . ? HOH A 635 . ? 1_555 ? 6 AC2 8 LYS A 129 ? LYS A 149 . ? 3_546 ? 7 AC2 8 ASP A 130 ? ASP A 150 . ? 3_546 ? 8 AC2 8 ARG A 151 ? ARG A 171 . ? 1_555 ? 9 AC2 8 HOH K . ? HOH A 439 . ? 3_546 ? 10 AC2 8 HOH K . ? HOH A 479 . ? 3_546 ? 11 AC2 8 HOH K . ? HOH A 480 . ? 1_555 ? 12 AC2 8 HOH K . ? HOH A 498 . ? 1_555 ? 13 AC2 8 HOH K . ? HOH A 628 . ? 1_555 ? 14 AC3 3 LYS A 127 ? LYS A 147 . ? 3_546 ? 15 AC3 3 LYS A 149 ? LYS A 169 . ? 1_555 ? 16 AC3 3 ARG A 151 ? ARG A 171 . ? 1_555 ? 17 AC4 9 LYS A 122 ? LYS A 142 . ? 1_555 ? 18 AC4 9 GLU A 190 ? GLU A 210 . ? 1_555 ? 19 AC4 9 GLY A 191 ? GLY A 211 . ? 1_555 ? 20 AC4 9 ASP A 193 ? ASP A 213 . ? 1_555 ? 21 AC4 9 SER A 194 ? SER A 214 . ? 1_555 ? 22 AC4 9 PRO A 195 ? PRO A 215 . ? 1_555 ? 23 AC4 9 HOH K . ? HOH A 434 . ? 1_555 ? 24 AC4 9 HOH K . ? HOH A 620 . ? 1_555 ? 25 AC4 9 HOH K . ? HOH A 621 . ? 1_555 ? 26 AC5 9 SER A 4 ? SER A 24 . ? 3_555 ? 27 AC5 9 LEU A 5 ? LEU A 25 . ? 3_555 ? 28 AC5 9 ASP A 64 ? ASP A 84 . ? 1_555 ? 29 AC5 9 SER A 209 ? SER A 229 . ? 3_555 ? 30 AC5 9 MSE A 212 ? MSE A 232 . ? 3_555 ? 31 AC5 9 HOH K . ? HOH A 435 . ? 3_555 ? 32 AC5 9 HOH K . ? HOH A 597 . ? 1_555 ? 33 AC5 9 HOH K . ? HOH A 614 . ? 1_555 ? 34 AC5 9 HOH K . ? HOH A 641 . ? 1_555 ? 35 AC6 5 GLU A 16 ? GLU A 36 . ? 1_555 ? 36 AC6 5 GLU A 16 ? GLU A 36 . ? 2_555 ? 37 AC6 5 ASN A 19 ? ASN A 39 . ? 2_555 ? 38 AC6 5 ASN A 19 ? ASN A 39 . ? 1_555 ? 39 AC6 5 LYS A 231 ? LYS A 251 . ? 1_555 ? 40 AC7 5 ASN A 19 ? ASN A 39 . ? 1_555 ? 41 AC7 5 ILE A 34 ? ILE A 54 . ? 1_555 ? 42 AC7 5 GLU A 36 ? GLU A 56 . ? 1_555 ? 43 AC7 5 GLU A 230 ? GLU A 250 . ? 2_555 ? 44 AC7 5 HOH K . ? HOH A 583 . ? 2_555 ? 45 AC8 3 HIS A 220 ? HIS A 240 . ? 1_555 ? 46 AC8 3 HOH K . ? HOH A 547 . ? 1_555 ? 47 AC8 3 HOH K . ? HOH A 595 . ? 1_555 ? # _atom_sites.entry_id 4K3F _atom_sites.fract_transf_matrix[1][1] 0.010042 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024686 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016444 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 ALA 2 22 22 ALA ALA A . n A 1 3 GLU 3 23 23 GLU GLU A . n A 1 4 SER 4 24 24 SER SER A . n A 1 5 LEU 5 25 25 LEU LEU A . n A 1 6 THR 6 26 26 THR THR A . n A 1 7 VAL 7 27 27 VAL VAL A . n A 1 8 ALA 8 28 28 ALA ALA A . n A 1 9 ALA 9 29 29 ALA ALA A . n A 1 10 THR 10 30 30 THR THR A . n A 1 11 PRO 11 31 31 PRO PRO A . n A 1 12 VAL 12 32 32 VAL VAL A . n A 1 13 PRO 13 33 33 PRO PRO A . n A 1 14 HIS 14 34 34 HIS HIS A . n A 1 15 ALA 15 35 35 ALA ALA A . n A 1 16 GLU 16 36 36 GLU GLU A . n A 1 17 ILE 17 37 37 ILE ILE A . n A 1 18 LEU 18 38 38 LEU LEU A . n A 1 19 ASN 19 39 39 ASN ASN A . n A 1 20 VAL 20 40 40 VAL VAL A . n A 1 21 VAL 21 41 41 VAL VAL A . n A 1 22 LYS 22 42 42 LYS LYS A . n A 1 23 PRO 23 43 43 PRO PRO A . n A 1 24 LEU 24 44 44 LEU LEU A . n A 1 25 LEU 25 45 45 LEU LEU A . n A 1 26 ALA 26 46 46 ALA ALA A . n A 1 27 LYS 27 47 47 LYS LYS A . n A 1 28 GLU 28 48 48 GLU GLU A . n A 1 29 GLY 29 49 49 GLY GLY A . n A 1 30 VAL 30 50 50 VAL VAL A . n A 1 31 ASP 31 51 51 ASP ASP A . n A 1 32 LEU 32 52 52 LEU LEU A . n A 1 33 LYS 33 53 53 LYS LYS A . n A 1 34 ILE 34 54 54 ILE ILE A . n A 1 35 LYS 35 55 55 LYS LYS A . n A 1 36 GLU 36 56 56 GLU GLU A . n A 1 37 PHE 37 57 57 PHE PHE A . n A 1 38 THR 38 58 58 THR THR A . n A 1 39 ASP 39 59 59 ASP ASP A . n A 1 40 TYR 40 60 60 TYR TYR A . n A 1 41 VAL 41 61 61 VAL VAL A . n A 1 42 GLN 42 62 62 GLN GLN A . n A 1 43 PRO 43 63 63 PRO PRO A . n A 1 44 ASN 44 64 64 ASN ASN A . n A 1 45 VAL 45 65 65 VAL VAL A . n A 1 46 GLN 46 66 66 GLN GLN A . n A 1 47 VAL 47 67 67 VAL VAL A . n A 1 48 SER 48 68 68 SER SER A . n A 1 49 GLU 49 69 69 GLU GLU A . n A 1 50 LYS 50 70 70 LYS LYS A . n A 1 51 ARG 51 71 71 ARG ARG A . n A 1 52 LEU 52 72 72 LEU LEU A . n A 1 53 ASP 53 73 73 ASP ASP A . n A 1 54 ALA 54 74 74 ALA ALA A . n A 1 55 ASN 55 75 75 ASN ASN A . n A 1 56 PHE 56 76 76 PHE PHE A . n A 1 57 PHE 57 77 77 PHE PHE A . n A 1 58 GLN 58 78 78 GLN GLN A . n A 1 59 HIS 59 79 79 HIS HIS A . n A 1 60 GLN 60 80 80 GLN GLN A . n A 1 61 PRO 61 81 81 PRO PRO A . n A 1 62 TYR 62 82 82 TYR TYR A . n A 1 63 LEU 63 83 83 LEU LEU A . n A 1 64 ASP 64 84 84 ASP ASP A . n A 1 65 GLU 65 85 85 GLU GLU A . n A 1 66 PHE 66 86 86 PHE PHE A . n A 1 67 ASN 67 87 87 ASN ASN A . n A 1 68 LYS 68 88 88 LYS LYS A . n A 1 69 ALA 69 89 89 ALA ALA A . n A 1 70 LYS 70 90 90 LYS LYS A . n A 1 71 GLY 71 91 91 GLY GLY A . n A 1 72 THR 72 92 92 THR THR A . n A 1 73 ASP 73 93 93 ASP ASP A . n A 1 74 LEU 74 94 94 LEU LEU A . n A 1 75 VAL 75 95 95 VAL VAL A . n A 1 76 ALA 76 96 96 ALA ALA A . n A 1 77 VAL 77 97 97 VAL VAL A . n A 1 78 THR 78 98 98 THR THR A . n A 1 79 GLY 79 99 99 GLY GLY A . n A 1 80 VAL 80 100 100 VAL VAL A . n A 1 81 HIS 81 101 101 HIS HIS A . n A 1 82 ILE 82 102 102 ILE ILE A . n A 1 83 GLU 83 103 103 GLU GLU A . n A 1 84 PRO 84 104 104 PRO PRO A . n A 1 85 LEU 85 105 105 LEU LEU A . n A 1 86 GLY 86 106 106 GLY GLY A . n A 1 87 ALA 87 107 107 ALA ALA A . n A 1 88 TYR 88 108 108 TYR TYR A . n A 1 89 SER 89 109 109 SER SER A . n A 1 90 SER 90 110 110 SER SER A . n A 1 91 LYS 91 111 111 LYS LYS A . n A 1 92 TYR 92 112 112 TYR TYR A . n A 1 93 LYS 93 113 113 LYS LYS A . n A 1 94 LYS 94 114 114 LYS LYS A . n A 1 95 LEU 95 115 115 LEU LEU A . n A 1 96 ASP 96 116 116 ASP ASP A . n A 1 97 GLU 97 117 117 GLU GLU A . n A 1 98 LEU 98 118 118 LEU LEU A . n A 1 99 PRO 99 119 119 PRO PRO A . n A 1 100 SER 100 120 120 SER SER A . n A 1 101 GLY 101 121 121 GLY GLY A . n A 1 102 ALA 102 122 122 ALA ALA A . n A 1 103 THR 103 123 123 THR THR A . n A 1 104 VAL 104 124 124 VAL VAL A . n A 1 105 VAL 105 125 125 VAL VAL A . n A 1 106 ILE 106 126 126 ILE ILE A . n A 1 107 PRO 107 127 127 PRO PRO A . n A 1 108 ASN 108 128 128 ASN ASN A . n A 1 109 ASP 109 129 129 ASP ASP A . n A 1 110 ALA 110 130 130 ALA ALA A . n A 1 111 THR 111 131 131 THR THR A . n A 1 112 ASN 112 132 132 ASN ASN A . n A 1 113 GLY 113 133 133 GLY GLY A . n A 1 114 GLY 114 134 134 GLY GLY A . n A 1 115 ARG 115 135 135 ARG ARG A . n A 1 116 ALA 116 136 136 ALA ALA A . n A 1 117 LEU 117 137 137 LEU LEU A . n A 1 118 LEU 118 138 138 LEU LEU A . n A 1 119 LEU 119 139 139 LEU LEU A . n A 1 120 LEU 120 140 140 LEU LEU A . n A 1 121 ASP 121 141 141 ASP ASP A . n A 1 122 LYS 122 142 142 LYS LYS A . n A 1 123 ALA 123 143 143 ALA ALA A . n A 1 124 GLY 124 144 144 GLY GLY A . n A 1 125 VAL 125 145 145 VAL VAL A . n A 1 126 ILE 126 146 146 ILE ILE A . n A 1 127 LYS 127 147 147 LYS LYS A . n A 1 128 LEU 128 148 148 LEU LEU A . n A 1 129 LYS 129 149 149 LYS LYS A . n A 1 130 ASP 130 150 150 ASP ASP A . n A 1 131 ASN 131 151 151 ASN ASN A . n A 1 132 LYS 132 152 152 LYS LYS A . n A 1 133 SER 133 153 153 SER SER A . n A 1 134 ILE 134 154 154 ILE ILE A . n A 1 135 THR 135 155 155 THR THR A . n A 1 136 ALA 136 156 156 ALA ALA A . n A 1 137 THR 137 157 157 THR THR A . n A 1 138 PRO 138 158 158 PRO PRO A . n A 1 139 LYS 139 159 159 LYS LYS A . n A 1 140 ASP 140 160 160 ASP ASP A . n A 1 141 ILE 141 161 161 ILE ILE A . n A 1 142 VAL 142 162 162 VAL VAL A . n A 1 143 ASP 143 163 163 ASP ASP A . n A 1 144 ASN 144 164 164 ASN ASN A . n A 1 145 PRO 145 165 165 PRO PRO A . n A 1 146 LYS 146 166 166 LYS LYS A . n A 1 147 ASN 147 167 167 ASN ASN A . n A 1 148 ILE 148 168 168 ILE ILE A . n A 1 149 LYS 149 169 169 LYS LYS A . n A 1 150 ILE 150 170 170 ILE ILE A . n A 1 151 ARG 151 171 171 ARG ARG A . n A 1 152 GLU 152 172 172 GLU GLU A . n A 1 153 LEU 153 173 173 LEU LEU A . n A 1 154 GLU 154 174 174 GLU GLU A . n A 1 155 ALA 155 175 175 ALA ALA A . n A 1 156 ALA 156 176 176 ALA ALA A . n A 1 157 THR 157 177 177 THR THR A . n A 1 158 LEU 158 178 178 LEU LEU A . n A 1 159 PRO 159 179 179 PRO PRO A . n A 1 160 ARG 160 180 180 ARG ARG A . n A 1 161 VAL 161 181 181 VAL VAL A . n A 1 162 LEU 162 182 182 LEU LEU A . n A 1 163 THR 163 183 183 THR THR A . n A 1 164 GLN 164 184 184 GLN GLN A . n A 1 165 VAL 165 185 185 VAL VAL A . n A 1 166 ASP 166 186 186 ASP ASP A . n A 1 167 MSE 167 187 187 MSE MSE A . n A 1 168 ALA 168 188 188 ALA ALA A . n A 1 169 LEU 169 189 189 LEU LEU A . n A 1 170 ILE 170 190 190 ILE ILE A . n A 1 171 ASN 171 191 191 ASN ASN A . n A 1 172 THR 172 192 192 THR THR A . n A 1 173 ASN 173 193 193 ASN ASN A . n A 1 174 TYR 174 194 194 TYR TYR A . n A 1 175 ALA 175 195 195 ALA ALA A . n A 1 176 LEU 176 196 196 LEU LEU A . n A 1 177 GLU 177 197 197 GLU GLU A . n A 1 178 ALA 178 198 198 ALA ALA A . n A 1 179 LYS 179 199 199 LYS LYS A . n A 1 180 LEU 180 200 200 LEU LEU A . n A 1 181 ASN 181 201 201 ASN ASN A . n A 1 182 PRO 182 202 202 PRO PRO A . n A 1 183 THR 183 203 203 THR THR A . n A 1 184 LYS 184 204 204 LYS LYS A . n A 1 185 ASP 185 205 205 ASP ASP A . n A 1 186 ALA 186 206 206 ALA ALA A . n A 1 187 LEU 187 207 207 LEU LEU A . n A 1 188 ALA 188 208 208 ALA ALA A . n A 1 189 ILE 189 209 209 ILE ILE A . n A 1 190 GLU 190 210 210 GLU GLU A . n A 1 191 GLY 191 211 211 GLY GLY A . n A 1 192 SER 192 212 212 SER SER A . n A 1 193 ASP 193 213 213 ASP ASP A . n A 1 194 SER 194 214 214 SER SER A . n A 1 195 PRO 195 215 215 PRO PRO A . n A 1 196 TYR 196 216 216 TYR TYR A . n A 1 197 VAL 197 217 217 VAL VAL A . n A 1 198 ASN 198 218 218 ASN ASN A . n A 1 199 ILE 199 219 219 ILE ILE A . n A 1 200 LEU 200 220 220 LEU LEU A . n A 1 201 VAL 201 221 221 VAL VAL A . n A 1 202 ALA 202 222 222 ALA ALA A . n A 1 203 ARG 203 223 223 ARG ARG A . n A 1 204 PRO 204 224 224 PRO PRO A . n A 1 205 ASP 205 225 225 ASP ASP A . n A 1 206 ASN 206 226 226 ASN ASN A . n A 1 207 LYS 207 227 227 LYS LYS A . n A 1 208 ASP 208 228 228 ASP ASP A . n A 1 209 SER 209 229 229 SER SER A . n A 1 210 ASP 210 230 230 ASP ASP A . n A 1 211 ALA 211 231 231 ALA ALA A . n A 1 212 MSE 212 232 232 MSE MSE A . n A 1 213 GLN 213 233 233 GLN GLN A . n A 1 214 LYS 214 234 234 LYS LYS A . n A 1 215 LEU 215 235 235 LEU LEU A . n A 1 216 ALA 216 236 236 ALA ALA A . n A 1 217 LYS 217 237 237 LYS LYS A . n A 1 218 ALA 218 238 238 ALA ALA A . n A 1 219 LEU 219 239 239 LEU LEU A . n A 1 220 HIS 220 240 240 HIS HIS A . n A 1 221 SER 221 241 241 SER SER A . n A 1 222 ALA 222 242 242 ALA ALA A . n A 1 223 GLU 223 243 243 GLU GLU A . n A 1 224 ILE 224 244 244 ILE ILE A . n A 1 225 LYS 225 245 245 LYS LYS A . n A 1 226 GLN 226 246 246 GLN GLN A . n A 1 227 PHE 227 247 247 PHE PHE A . n A 1 228 ILE 228 248 248 ILE ILE A . n A 1 229 GLN 229 249 249 GLN GLN A . n A 1 230 GLU 230 250 250 GLU GLU A . n A 1 231 LYS 231 251 251 LYS LYS A . n A 1 232 TYR 232 252 252 TYR TYR A . n A 1 233 LYS 233 253 253 LYS LYS A . n A 1 234 GLY 234 254 254 GLY GLY A . n A 1 235 ALA 235 255 255 ALA ALA A . n A 1 236 VAL 236 256 256 VAL VAL A . n A 1 237 VAL 237 257 257 VAL VAL A . n A 1 238 PRO 238 258 258 PRO PRO A . n A 1 239 ALA 239 259 259 ALA ALA A . n A 1 240 PHE 240 260 260 PHE PHE A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MSE 1 300 300 MSE MSE A . C 3 CL 1 301 301 CL CL A . D 4 SO4 1 302 302 SO4 SO4 A . E 4 SO4 1 303 303 SO4 SO4 A . F 5 GOL 1 304 304 GOL GOL A . G 5 GOL 1 305 305 GOL GOL A . H 5 GOL 1 306 306 GOL GOL A . I 5 GOL 1 307 307 GOL GOL A . J 5 GOL 1 308 308 GOL GOL A . K 6 HOH 1 401 309 HOH HOH A . K 6 HOH 2 402 310 HOH HOH A . K 6 HOH 3 403 311 HOH HOH A . K 6 HOH 4 404 312 HOH HOH A . K 6 HOH 5 405 313 HOH HOH A . K 6 HOH 6 406 314 HOH HOH A . K 6 HOH 7 407 315 HOH HOH A . K 6 HOH 8 408 316 HOH HOH A . K 6 HOH 9 409 317 HOH HOH A . K 6 HOH 10 410 318 HOH HOH A . K 6 HOH 11 411 319 HOH HOH A . K 6 HOH 12 412 320 HOH HOH A . K 6 HOH 13 413 321 HOH HOH A . K 6 HOH 14 414 322 HOH HOH A . K 6 HOH 15 415 323 HOH HOH A . K 6 HOH 16 416 324 HOH HOH A . K 6 HOH 17 417 325 HOH HOH A . K 6 HOH 18 418 326 HOH HOH A . K 6 HOH 19 419 327 HOH HOH A . K 6 HOH 20 420 328 HOH HOH A . K 6 HOH 21 421 329 HOH HOH A . K 6 HOH 22 422 330 HOH HOH A . K 6 HOH 23 423 331 HOH HOH A . K 6 HOH 24 424 332 HOH HOH A . K 6 HOH 25 425 333 HOH HOH A . K 6 HOH 26 426 334 HOH HOH A . K 6 HOH 27 427 335 HOH HOH A . K 6 HOH 28 428 336 HOH HOH A . K 6 HOH 29 429 337 HOH HOH A . K 6 HOH 30 430 338 HOH HOH A . K 6 HOH 31 431 339 HOH HOH A . K 6 HOH 32 432 340 HOH HOH A . K 6 HOH 33 433 341 HOH HOH A . K 6 HOH 34 434 342 HOH HOH A . K 6 HOH 35 435 343 HOH HOH A . K 6 HOH 36 436 344 HOH HOH A . K 6 HOH 37 437 345 HOH HOH A . K 6 HOH 38 438 346 HOH HOH A . K 6 HOH 39 439 347 HOH HOH A . K 6 HOH 40 440 348 HOH HOH A . K 6 HOH 41 441 349 HOH HOH A . K 6 HOH 42 442 350 HOH HOH A . K 6 HOH 43 443 351 HOH HOH A . K 6 HOH 44 444 352 HOH HOH A . K 6 HOH 45 445 353 HOH HOH A . K 6 HOH 46 446 354 HOH HOH A . K 6 HOH 47 447 355 HOH HOH A . K 6 HOH 48 448 356 HOH HOH A . K 6 HOH 49 449 357 HOH HOH A . K 6 HOH 50 450 358 HOH HOH A . K 6 HOH 51 451 359 HOH HOH A . K 6 HOH 52 452 360 HOH HOH A . K 6 HOH 53 453 361 HOH HOH A . K 6 HOH 54 454 362 HOH HOH A . K 6 HOH 55 455 363 HOH HOH A . K 6 HOH 56 456 364 HOH HOH A . K 6 HOH 57 457 365 HOH HOH A . K 6 HOH 58 458 366 HOH HOH A . K 6 HOH 59 459 367 HOH HOH A . K 6 HOH 60 460 368 HOH HOH A . K 6 HOH 61 461 369 HOH HOH A . K 6 HOH 62 462 370 HOH HOH A . K 6 HOH 63 463 371 HOH HOH A . K 6 HOH 64 464 372 HOH HOH A . K 6 HOH 65 465 373 HOH HOH A . K 6 HOH 66 466 374 HOH HOH A . K 6 HOH 67 467 375 HOH HOH A . K 6 HOH 68 468 376 HOH HOH A . K 6 HOH 69 469 377 HOH HOH A . K 6 HOH 70 470 378 HOH HOH A . K 6 HOH 71 471 379 HOH HOH A . K 6 HOH 72 472 380 HOH HOH A . K 6 HOH 73 473 381 HOH HOH A . K 6 HOH 74 474 382 HOH HOH A . K 6 HOH 75 475 383 HOH HOH A . K 6 HOH 76 476 384 HOH HOH A . K 6 HOH 77 477 385 HOH HOH A . K 6 HOH 78 478 386 HOH HOH A . K 6 HOH 79 479 387 HOH HOH A . K 6 HOH 80 480 388 HOH HOH A . K 6 HOH 81 481 389 HOH HOH A . K 6 HOH 82 482 390 HOH HOH A . K 6 HOH 83 483 391 HOH HOH A . K 6 HOH 84 484 392 HOH HOH A . K 6 HOH 85 485 393 HOH HOH A . K 6 HOH 86 486 394 HOH HOH A . K 6 HOH 87 487 395 HOH HOH A . K 6 HOH 88 488 396 HOH HOH A . K 6 HOH 89 489 397 HOH HOH A . K 6 HOH 90 490 398 HOH HOH A . K 6 HOH 91 491 399 HOH HOH A . K 6 HOH 92 492 400 HOH HOH A . K 6 HOH 93 493 401 HOH HOH A . K 6 HOH 94 494 402 HOH HOH A . K 6 HOH 95 495 403 HOH HOH A . K 6 HOH 96 496 404 HOH HOH A . K 6 HOH 97 497 405 HOH HOH A . K 6 HOH 98 498 406 HOH HOH A . K 6 HOH 99 499 407 HOH HOH A . K 6 HOH 100 500 408 HOH HOH A . K 6 HOH 101 501 409 HOH HOH A . K 6 HOH 102 502 410 HOH HOH A . K 6 HOH 103 503 411 HOH HOH A . K 6 HOH 104 504 412 HOH HOH A . K 6 HOH 105 505 413 HOH HOH A . K 6 HOH 106 506 414 HOH HOH A . K 6 HOH 107 507 415 HOH HOH A . K 6 HOH 108 508 416 HOH HOH A . K 6 HOH 109 509 417 HOH HOH A . K 6 HOH 110 510 418 HOH HOH A . K 6 HOH 111 511 419 HOH HOH A . K 6 HOH 112 512 420 HOH HOH A . K 6 HOH 113 513 421 HOH HOH A . K 6 HOH 114 514 422 HOH HOH A . K 6 HOH 115 515 423 HOH HOH A . K 6 HOH 116 516 424 HOH HOH A . K 6 HOH 117 517 425 HOH HOH A . K 6 HOH 118 518 426 HOH HOH A . K 6 HOH 119 519 427 HOH HOH A . K 6 HOH 120 520 428 HOH HOH A . K 6 HOH 121 521 429 HOH HOH A . K 6 HOH 122 522 430 HOH HOH A . K 6 HOH 123 523 431 HOH HOH A . K 6 HOH 124 524 432 HOH HOH A . K 6 HOH 125 525 433 HOH HOH A . K 6 HOH 126 526 434 HOH HOH A . K 6 HOH 127 527 435 HOH HOH A . K 6 HOH 128 528 436 HOH HOH A . K 6 HOH 129 529 437 HOH HOH A . K 6 HOH 130 530 438 HOH HOH A . K 6 HOH 131 531 439 HOH HOH A . K 6 HOH 132 532 440 HOH HOH A . K 6 HOH 133 533 441 HOH HOH A . K 6 HOH 134 534 442 HOH HOH A . K 6 HOH 135 535 443 HOH HOH A . K 6 HOH 136 536 444 HOH HOH A . K 6 HOH 137 537 445 HOH HOH A . K 6 HOH 138 538 446 HOH HOH A . K 6 HOH 139 539 447 HOH HOH A . K 6 HOH 140 540 448 HOH HOH A . K 6 HOH 141 541 449 HOH HOH A . K 6 HOH 142 542 450 HOH HOH A . K 6 HOH 143 543 451 HOH HOH A . K 6 HOH 144 544 452 HOH HOH A . K 6 HOH 145 545 453 HOH HOH A . K 6 HOH 146 546 454 HOH HOH A . K 6 HOH 147 547 455 HOH HOH A . K 6 HOH 148 548 456 HOH HOH A . K 6 HOH 149 549 457 HOH HOH A . K 6 HOH 150 550 458 HOH HOH A . K 6 HOH 151 551 459 HOH HOH A . K 6 HOH 152 552 460 HOH HOH A . K 6 HOH 153 553 461 HOH HOH A . K 6 HOH 154 554 462 HOH HOH A . K 6 HOH 155 555 463 HOH HOH A . K 6 HOH 156 556 464 HOH HOH A . K 6 HOH 157 557 465 HOH HOH A . K 6 HOH 158 558 466 HOH HOH A . K 6 HOH 159 559 467 HOH HOH A . K 6 HOH 160 560 468 HOH HOH A . K 6 HOH 161 561 469 HOH HOH A . K 6 HOH 162 562 470 HOH HOH A . K 6 HOH 163 563 471 HOH HOH A . K 6 HOH 164 564 472 HOH HOH A . K 6 HOH 165 565 473 HOH HOH A . K 6 HOH 166 566 474 HOH HOH A . K 6 HOH 167 567 475 HOH HOH A . K 6 HOH 168 568 476 HOH HOH A . K 6 HOH 169 569 477 HOH HOH A . K 6 HOH 170 570 478 HOH HOH A . K 6 HOH 171 571 479 HOH HOH A . K 6 HOH 172 572 480 HOH HOH A . K 6 HOH 173 573 481 HOH HOH A . K 6 HOH 174 574 482 HOH HOH A . K 6 HOH 175 575 483 HOH HOH A . K 6 HOH 176 576 484 HOH HOH A . K 6 HOH 177 577 485 HOH HOH A . K 6 HOH 178 578 486 HOH HOH A . K 6 HOH 179 579 487 HOH HOH A . K 6 HOH 180 580 488 HOH HOH A . K 6 HOH 181 581 489 HOH HOH A . K 6 HOH 182 582 490 HOH HOH A . K 6 HOH 183 583 491 HOH HOH A . K 6 HOH 184 584 492 HOH HOH A . K 6 HOH 185 585 493 HOH HOH A . K 6 HOH 186 586 494 HOH HOH A . K 6 HOH 187 587 495 HOH HOH A . K 6 HOH 188 588 496 HOH HOH A . K 6 HOH 189 589 497 HOH HOH A . K 6 HOH 190 590 498 HOH HOH A . K 6 HOH 191 591 499 HOH HOH A . K 6 HOH 192 592 500 HOH HOH A . K 6 HOH 193 593 501 HOH HOH A . K 6 HOH 194 594 502 HOH HOH A . K 6 HOH 195 595 503 HOH HOH A . K 6 HOH 196 596 504 HOH HOH A . K 6 HOH 197 597 505 HOH HOH A . K 6 HOH 198 598 506 HOH HOH A . K 6 HOH 199 599 507 HOH HOH A . K 6 HOH 200 600 508 HOH HOH A . K 6 HOH 201 601 509 HOH HOH A . K 6 HOH 202 602 510 HOH HOH A . K 6 HOH 203 603 511 HOH HOH A . K 6 HOH 204 604 512 HOH HOH A . K 6 HOH 205 605 513 HOH HOH A . K 6 HOH 206 606 514 HOH HOH A . K 6 HOH 207 607 515 HOH HOH A . K 6 HOH 208 608 516 HOH HOH A . K 6 HOH 209 609 517 HOH HOH A . K 6 HOH 210 610 518 HOH HOH A . K 6 HOH 211 611 519 HOH HOH A . K 6 HOH 212 612 520 HOH HOH A . K 6 HOH 213 613 521 HOH HOH A . K 6 HOH 214 614 522 HOH HOH A . K 6 HOH 215 615 523 HOH HOH A . K 6 HOH 216 616 524 HOH HOH A . K 6 HOH 217 617 525 HOH HOH A . K 6 HOH 218 618 526 HOH HOH A . K 6 HOH 219 619 527 HOH HOH A . K 6 HOH 220 620 528 HOH HOH A . K 6 HOH 221 621 529 HOH HOH A . K 6 HOH 222 622 530 HOH HOH A . K 6 HOH 223 623 531 HOH HOH A . K 6 HOH 224 624 532 HOH HOH A . K 6 HOH 225 625 533 HOH HOH A . K 6 HOH 226 626 534 HOH HOH A . K 6 HOH 227 627 535 HOH HOH A . K 6 HOH 228 628 536 HOH HOH A . K 6 HOH 229 629 537 HOH HOH A . K 6 HOH 230 630 538 HOH HOH A . K 6 HOH 231 631 539 HOH HOH A . K 6 HOH 232 632 540 HOH HOH A . K 6 HOH 233 633 541 HOH HOH A . K 6 HOH 234 634 542 HOH HOH A . K 6 HOH 235 635 543 HOH HOH A . K 6 HOH 236 636 544 HOH HOH A . K 6 HOH 237 637 545 HOH HOH A . K 6 HOH 238 638 546 HOH HOH A . K 6 HOH 239 639 547 HOH HOH A . K 6 HOH 240 640 548 HOH HOH A . K 6 HOH 241 641 549 HOH HOH A . K 6 HOH 242 642 550 HOH HOH A . K 6 HOH 243 643 551 HOH HOH A . K 6 HOH 244 644 552 HOH HOH A . K 6 HOH 245 645 553 HOH HOH A . K 6 HOH 246 646 554 HOH HOH A . K 6 HOH 247 647 555 HOH HOH A . K 6 HOH 248 648 556 HOH HOH A . K 6 HOH 249 649 557 HOH HOH A . K 6 HOH 250 650 558 HOH HOH A . K 6 HOH 251 651 559 HOH HOH A . K 6 HOH 252 652 560 HOH HOH A . K 6 HOH 253 653 561 HOH HOH A . K 6 HOH 254 654 562 HOH HOH A . K 6 HOH 255 655 563 HOH HOH A . K 6 HOH 256 656 564 HOH HOH A . K 6 HOH 257 657 565 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 167 A MSE 187 ? MET SELENOMETHIONINE 2 A MSE 212 A MSE 232 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 499 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id K _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-24 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_citation_author.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 15.3590 _pdbx_refine_tls.origin_y 8.7600 _pdbx_refine_tls.origin_z 12.8430 _pdbx_refine_tls.T[1][1] 0.0138 _pdbx_refine_tls.T[2][2] 0.0096 _pdbx_refine_tls.T[3][3] 0.0107 _pdbx_refine_tls.T[1][2] 0.0084 _pdbx_refine_tls.T[1][3] 0.0088 _pdbx_refine_tls.T[2][3] 0.0021 _pdbx_refine_tls.L[1][1] 0.1378 _pdbx_refine_tls.L[2][2] 0.4739 _pdbx_refine_tls.L[3][3] 0.7150 _pdbx_refine_tls.L[1][2] 0.0644 _pdbx_refine_tls.L[1][3] 0.0397 _pdbx_refine_tls.L[2][3] 0.2792 _pdbx_refine_tls.S[1][1] -0.0001 _pdbx_refine_tls.S[2][2] -0.0199 _pdbx_refine_tls.S[3][3] 0.0200 _pdbx_refine_tls.S[1][2] -0.0080 _pdbx_refine_tls.S[1][3] -0.0068 _pdbx_refine_tls.S[2][3] 0.0453 _pdbx_refine_tls.S[2][1] 0.0321 _pdbx_refine_tls.S[3][1] -0.0216 _pdbx_refine_tls.S[3][2] -0.0580 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 260 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'July 4, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4K3F _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 22-260 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 568 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 636 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 77 ? ? -167.34 -16.68 2 1 VAL A 100 ? ? -120.74 -55.15 3 1 ALA A 222 ? ? -147.09 -151.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 113 ? CG ? A LYS 93 CG 2 1 Y 1 A LYS 113 ? CD ? A LYS 93 CD 3 1 Y 1 A LYS 113 ? CE ? A LYS 93 CE 4 1 Y 1 A LYS 113 ? NZ ? A LYS 93 NZ 5 1 Y 1 A LYS 159 ? CG ? A LYS 139 CG 6 1 Y 1 A LYS 159 ? CD ? A LYS 139 CD 7 1 Y 1 A LYS 159 ? CE ? A LYS 139 CE 8 1 Y 1 A LYS 159 ? NZ ? A LYS 139 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 SELENOMETHIONINE MSE 3 'CHLORIDE ION' CL 4 'SULFATE ION' SO4 5 GLYCEROL GOL 6 water HOH #