HEADER CELL CYCLE/INHIBITOR 24-APR-13 4KCX TITLE BRDT IN COMPLEX WITH DINACICLIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN TESTIS-SPECIFIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FIRST BROMODOMAIN, UNP RESIDUES 21-137; COMPND 5 SYNONYM: CANCER/TESTIS ANTIGEN 9, CT9, RING3-LIKE PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRDT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS BRDT, BROMODOMAIN CONTAINING PROTEIN TESTIS SPECIFIC, CELL CYCLE- KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.P.MARTIN,E.SCHONBRUNN REVDAT 3 20-SEP-23 4KCX 1 REMARK REVDAT 2 25-DEC-13 4KCX 1 JRNL REVDAT 1 18-SEP-13 4KCX 0 JRNL AUTH M.P.MARTIN,S.H.OLESEN,G.I.GEORG,E.SCHONBRUNN JRNL TITL CYCLIN-DEPENDENT KINASE INHIBITOR DINACICLIB INTERACTS WITH JRNL TITL 2 THE ACETYL-LYSINE RECOGNITION SITE OF BROMODOMAINS. JRNL REF ACS CHEM.BIOL. V. 8 2360 2013 JRNL REFN ISSN 1554-8929 JRNL PMID 24007471 JRNL DOI 10.1021/CB4003283 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 18535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8123 - 3.8180 0.96 2555 135 0.1801 0.2042 REMARK 3 2 3.8180 - 3.0340 0.96 2494 131 0.1834 0.2385 REMARK 3 3 3.0340 - 2.6515 0.98 2525 133 0.2150 0.2735 REMARK 3 4 2.6515 - 2.4095 0.99 2533 133 0.2230 0.2859 REMARK 3 5 2.4095 - 2.2371 0.99 2523 133 0.2301 0.3035 REMARK 3 6 2.2371 - 2.1053 0.99 2500 132 0.2578 0.2853 REMARK 3 7 2.1053 - 2.0000 0.98 2478 130 0.3140 0.3673 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 43.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.66940 REMARK 3 B22 (A**2) : -12.23600 REMARK 3 B33 (A**2) : -3.43340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.36800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1889 REMARK 3 ANGLE : 1.189 2555 REMARK 3 CHIRALITY : 0.088 267 REMARK 3 PLANARITY : 0.005 314 REMARK 3 DIHEDRAL : 19.019 741 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 29:52) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7026 -24.9887 2.5745 REMARK 3 T TENSOR REMARK 3 T11: 0.3932 T22: 0.2430 REMARK 3 T33: 0.6705 T12: 0.0278 REMARK 3 T13: -0.1248 T23: -0.0686 REMARK 3 L TENSOR REMARK 3 L11: 4.8259 L22: 4.4417 REMARK 3 L33: 3.6872 L12: 4.0396 REMARK 3 L13: -1.4911 L23: -2.1393 REMARK 3 S TENSOR REMARK 3 S11: -0.1206 S12: 0.1072 S13: 0.4528 REMARK 3 S21: -0.3600 S22: 0.1487 S23: 1.6767 REMARK 3 S31: -0.2868 S32: -0.7237 S33: -0.0177 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 53:65) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8827 -28.9907 0.6270 REMARK 3 T TENSOR REMARK 3 T11: 0.5618 T22: 0.1043 REMARK 3 T33: 0.1373 T12: -0.0016 REMARK 3 T13: -0.0536 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 3.3581 L22: 5.1522 REMARK 3 L33: 0.8588 L12: -2.8513 REMARK 3 L13: -0.8799 L23: 1.1510 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.2274 S13: 0.1419 REMARK 3 S21: -0.2603 S22: -0.1211 S23: -0.0377 REMARK 3 S31: -0.1394 S32: -0.0561 S33: 0.0239 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 66:75) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9362 -36.2523 6.8546 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.1471 REMARK 3 T33: 0.1944 T12: 0.0752 REMARK 3 T13: -0.1301 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 6.1663 L22: 2.5572 REMARK 3 L33: 3.0506 L12: -0.5343 REMARK 3 L13: -0.7544 L23: -0.2159 REMARK 3 S TENSOR REMARK 3 S11: 0.1232 S12: -0.1430 S13: -0.3879 REMARK 3 S21: -0.0256 S22: 0.0064 S23: 0.1633 REMARK 3 S31: 0.1772 S32: -0.0393 S33: -0.0566 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 76:90) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9135 -36.2043 -0.5664 REMARK 3 T TENSOR REMARK 3 T11: 0.5200 T22: 0.2765 REMARK 3 T33: 0.5532 T12: -0.0472 REMARK 3 T13: -0.1935 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 3.6309 L22: 1.5084 REMARK 3 L33: 2.6103 L12: 1.9665 REMARK 3 L13: 0.9248 L23: 1.5262 REMARK 3 S TENSOR REMARK 3 S11: -0.4449 S12: 0.5812 S13: -0.4842 REMARK 3 S21: -1.0252 S22: 0.3010 S23: 0.8018 REMARK 3 S31: 0.4821 S32: -0.5371 S33: 0.1231 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 91:108) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5772 -32.6860 10.7093 REMARK 3 T TENSOR REMARK 3 T11: 0.3824 T22: 0.1537 REMARK 3 T33: 0.1497 T12: -0.0149 REMARK 3 T13: -0.0088 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 8.3134 L22: 5.7493 REMARK 3 L33: 4.0029 L12: 2.6050 REMARK 3 L13: 3.5871 L23: 1.4409 REMARK 3 S TENSOR REMARK 3 S11: 0.0565 S12: 0.0022 S13: -0.0545 REMARK 3 S21: -0.3932 S22: -0.2545 S23: 0.7797 REMARK 3 S31: 0.1292 S32: -0.3522 S33: 0.2366 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 109:113) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0026 -22.9334 15.6904 REMARK 3 T TENSOR REMARK 3 T11: 0.5987 T22: 0.2698 REMARK 3 T33: 0.1325 T12: -0.0467 REMARK 3 T13: -0.0352 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 1.1435 L22: 1.1735 REMARK 3 L33: 4.5689 L12: -1.1584 REMARK 3 L13: -2.2861 L23: 2.3155 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: -0.2029 S13: 0.1635 REMARK 3 S21: 0.0416 S22: 0.3931 S23: -0.2491 REMARK 3 S31: -0.2482 S32: 1.0442 S33: -0.3660 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 114:134) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8342 -22.8558 11.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.4851 T22: 0.2065 REMARK 3 T33: 0.4507 T12: 0.1353 REMARK 3 T13: -0.0457 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 4.4408 L22: 4.7644 REMARK 3 L33: 3.9963 L12: 2.2966 REMARK 3 L13: -1.5600 L23: -0.9579 REMARK 3 S TENSOR REMARK 3 S11: 0.3834 S12: 0.1865 S13: 0.6155 REMARK 3 S21: 0.0765 S22: -0.1382 S23: 1.2730 REMARK 3 S31: -0.5758 S32: -0.5057 S33: -0.1635 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 29:52) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6736 -34.1244 30.1931 REMARK 3 T TENSOR REMARK 3 T11: 0.7538 T22: 0.2497 REMARK 3 T33: 0.5486 T12: -0.0235 REMARK 3 T13: 0.1333 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 6.4968 L22: 5.4221 REMARK 3 L33: 2.7866 L12: -5.5017 REMARK 3 L13: 3.1056 L23: -2.7683 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: -0.3479 S13: -0.5612 REMARK 3 S21: 0.6220 S22: 0.0564 S23: 1.4982 REMARK 3 S31: 0.1280 S32: -0.4786 S33: -0.2063 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 53:90) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4265 -25.1559 32.5380 REMARK 3 T TENSOR REMARK 3 T11: 0.5975 T22: 0.1166 REMARK 3 T33: 0.1385 T12: -0.0130 REMARK 3 T13: 0.1106 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 5.4922 L22: 3.5797 REMARK 3 L33: 1.7107 L12: -0.5309 REMARK 3 L13: 1.2556 L23: 0.2630 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: -0.1736 S13: 0.0863 REMARK 3 S21: 0.2735 S22: -0.0411 S23: 0.4106 REMARK 3 S31: -0.1485 S32: -0.1928 S33: 0.0650 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 91:108) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5994 -26.4199 23.1814 REMARK 3 T TENSOR REMARK 3 T11: 0.5582 T22: 0.2158 REMARK 3 T33: 0.2656 T12: 0.0088 REMARK 3 T13: 0.0570 T23: -0.0618 REMARK 3 L TENSOR REMARK 3 L11: 2.3498 L22: 3.0498 REMARK 3 L33: 2.5275 L12: -1.9568 REMARK 3 L13: -1.4586 L23: 0.0302 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: -0.0217 S13: 0.1911 REMARK 3 S21: 0.3784 S22: -0.1192 S23: 0.5429 REMARK 3 S31: -0.0987 S32: -0.3091 S33: 0.1007 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 109:113) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7218 -36.1200 20.0720 REMARK 3 T TENSOR REMARK 3 T11: 0.7648 T22: 0.2321 REMARK 3 T33: 0.1627 T12: 0.0336 REMARK 3 T13: 0.0152 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.4206 L22: 0.0515 REMARK 3 L33: 5.1935 L12: 0.1472 REMARK 3 L13: 1.4783 L23: 0.5171 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: -0.0110 S13: -0.0381 REMARK 3 S21: -0.1265 S22: -0.1751 S23: -0.0732 REMARK 3 S31: 0.0193 S32: 0.8872 S33: 0.1658 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 114:134) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9300 -36.3650 21.2449 REMARK 3 T TENSOR REMARK 3 T11: 0.5471 T22: 0.1734 REMARK 3 T33: 0.3120 T12: -0.0939 REMARK 3 T13: 0.0144 T23: -0.0545 REMARK 3 L TENSOR REMARK 3 L11: 4.0737 L22: 7.5000 REMARK 3 L33: 4.7329 L12: -5.0301 REMARK 3 L13: 3.1514 L23: -2.1697 REMARK 3 S TENSOR REMARK 3 S11: 0.3314 S12: -0.1894 S13: -1.0029 REMARK 3 S21: -0.0440 S22: -0.1001 S23: 1.2094 REMARK 3 S31: 0.4587 S32: -0.4475 S33: -0.2741 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KCX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000079180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18535 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : 0.12700 REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : 0.62400 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4FLP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MM HEPES PH 7.5, 0.1M NACL, 1MM DTT REMARK 280 0.1M KSCN, 7% PEG3350, 5% ETGLY, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 14.97500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAIN A AND B FORM HOMODIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 ASN A 25 REMARK 465 GLY A 26 REMARK 465 ARG A 27 REMARK 465 LEU A 28 REMARK 465 GLN A 135 REMARK 465 GLU A 136 REMARK 465 GLU A 137 REMARK 465 ASN B 21 REMARK 465 THR B 22 REMARK 465 LYS B 23 REMARK 465 LYS B 24 REMARK 465 ASN B 25 REMARK 465 GLY B 26 REMARK 465 ARG B 27 REMARK 465 LEU B 28 REMARK 465 GLN B 135 REMARK 465 GLU B 136 REMARK 465 GLU B 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 63 72.12 -114.48 REMARK 500 ASN A 109 -155.40 -97.67 REMARK 500 ASN B 72 75.04 -117.88 REMARK 500 ASN B 109 -160.77 -100.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1QK A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1QK B 201 DBREF 4KCX A 21 137 UNP Q58F21 BRDT_HUMAN 21 137 DBREF 4KCX B 21 137 UNP Q58F21 BRDT_HUMAN 21 137 SEQRES 1 A 117 ASN THR LYS LYS ASN GLY ARG LEU THR ASN GLN LEU GLN SEQRES 2 A 117 TYR LEU GLN LYS VAL VAL LEU LYS ASP LEU TRP LYS HIS SEQRES 3 A 117 SER PHE SER TRP PRO PHE GLN ARG PRO VAL ASP ALA VAL SEQRES 4 A 117 LYS LEU GLN LEU PRO ASP TYR TYR THR ILE ILE LYS ASN SEQRES 5 A 117 PRO MET ASP LEU ASN THR ILE LYS LYS ARG LEU GLU ASN SEQRES 6 A 117 LYS TYR TYR ALA LYS ALA SER GLU CYS ILE GLU ASP PHE SEQRES 7 A 117 ASN THR MET PHE SER ASN CYS TYR LEU TYR ASN LYS PRO SEQRES 8 A 117 GLY ASP ASP ILE VAL LEU MET ALA GLN ALA LEU GLU LYS SEQRES 9 A 117 LEU PHE MET GLN LYS LEU SER GLN MET PRO GLN GLU GLU SEQRES 1 B 117 ASN THR LYS LYS ASN GLY ARG LEU THR ASN GLN LEU GLN SEQRES 2 B 117 TYR LEU GLN LYS VAL VAL LEU LYS ASP LEU TRP LYS HIS SEQRES 3 B 117 SER PHE SER TRP PRO PHE GLN ARG PRO VAL ASP ALA VAL SEQRES 4 B 117 LYS LEU GLN LEU PRO ASP TYR TYR THR ILE ILE LYS ASN SEQRES 5 B 117 PRO MET ASP LEU ASN THR ILE LYS LYS ARG LEU GLU ASN SEQRES 6 B 117 LYS TYR TYR ALA LYS ALA SER GLU CYS ILE GLU ASP PHE SEQRES 7 B 117 ASN THR MET PHE SER ASN CYS TYR LEU TYR ASN LYS PRO SEQRES 8 B 117 GLY ASP ASP ILE VAL LEU MET ALA GLN ALA LEU GLU LYS SEQRES 9 B 117 LEU PHE MET GLN LYS LEU SER GLN MET PRO GLN GLU GLU HET 1QK A 201 29 HET CL A 202 1 HET 1QK B 201 29 HETNAM 1QK 3-[({3-ETHYL-5-[(2S)-2-(2-HYDROXYETHYL)PIPERIDIN-1- HETNAM 2 1QK YL]PYRAZOLO[1,5-A]PYRIMIDIN-7-YL}AMINO)METHYL]-1- HETNAM 3 1QK HYDROXYPYRIDINIUM HETNAM CL CHLORIDE ION HETSYN 1QK DINACICLIB FORMUL 3 1QK 2(C21 H29 N6 O2 1+) FORMUL 4 CL CL 1- FORMUL 6 HOH *137(H2 O) HELIX 1 1 THR A 29 VAL A 38 1 10 HELIX 2 2 VAL A 38 LYS A 45 1 8 HELIX 3 3 HIS A 46 GLN A 53 5 8 HELIX 4 4 ASP A 65 ILE A 70 1 6 HELIX 5 5 ASP A 75 ASN A 85 1 11 HELIX 6 6 LYS A 90 ASN A 109 1 20 HELIX 7 7 ASP A 113 SER A 131 1 19 HELIX 8 8 ASN B 30 VAL B 38 1 9 HELIX 9 9 VAL B 38 HIS B 46 1 9 HELIX 10 10 SER B 47 GLN B 53 5 7 HELIX 11 11 ASP B 65 ILE B 70 1 6 HELIX 12 12 ASP B 75 ASN B 85 1 11 HELIX 13 13 LYS B 90 ASN B 109 1 20 HELIX 14 14 ASP B 113 SER B 131 1 19 SITE 1 AC1 10 TRP A 50 PRO A 51 PHE A 52 LEU A 61 SITE 2 AC1 10 LEU A 63 ASN A 109 ASP A 114 ILE A 115 SITE 3 AC1 10 HOH A 301 HOH A 302 SITE 1 AC2 7 TYR A 106 LEU A 107 ASN A 109 TYR B 106 SITE 2 AC2 7 LEU B 107 ASN B 109 HOH B 354 SITE 1 AC3 10 TRP B 50 PRO B 51 PHE B 52 LEU B 61 SITE 2 AC3 10 LEU B 63 ASN B 109 ASP B 114 HOH B 301 SITE 3 AC3 10 HOH B 306 HOH B 352 CRYST1 64.720 29.950 71.380 90.00 94.12 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015451 0.000000 0.001113 0.00000 SCALE2 0.000000 0.033389 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014046 0.00000