HEADER TRANSFERASE 26-APR-13 4KF9 TITLE CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER FROM TITLE 2 RALSTONIA SOLANACEARUM, TARGET EFI-501780, WITH BOUND GSH COORDINATED TITLE 3 TO A ZINC ION, ORDERED ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; SOURCE 3 ORGANISM_TAXID: 564066; SOURCE 4 GENE: GSTG, RSIPO_01298; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS GLUTATHIONE S-TRANSFERASE FOLD, ENZYME FUNCTION INITIATIVE, EFI, KEYWDS 2 STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS, AUTHOR 3 J.HAMMONDS,B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT, AUTHOR 4 R.N.ARMSTRONG,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 2 20-SEP-23 4KF9 1 REMARK LINK REVDAT 1 22-MAY-13 4KF9 0 JRNL AUTH M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,J.HAMMONDS,B.HILLERICH,J.LOVE, JRNL AUTH 4 R.D.SEIDEL,H.J.IMKER,J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO, JRNL AUTH 5 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER JRNL TITL 2 FROM RALSTONIA SOLANACEARUM, TARGET EFI-501780, WITH BOUND JRNL TITL 3 GSH COORDINATED TO A ZINC ION, ORDERED ACTIVE SITE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31979 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3032 - 5.2639 0.99 2667 136 0.1768 0.2172 REMARK 3 2 5.2639 - 4.1788 1.00 2565 146 0.1406 0.1529 REMARK 3 3 4.1788 - 3.6508 1.00 2540 141 0.1379 0.1679 REMARK 3 4 3.6508 - 3.3171 1.00 2525 133 0.1489 0.1614 REMARK 3 5 3.3171 - 3.0794 1.00 2529 128 0.1600 0.1795 REMARK 3 6 3.0794 - 2.8979 1.00 2524 138 0.1607 0.1996 REMARK 3 7 2.8979 - 2.7527 1.00 2498 126 0.1566 0.1842 REMARK 3 8 2.7527 - 2.6329 1.00 2524 144 0.1569 0.2123 REMARK 3 9 2.6329 - 2.5316 1.00 2478 134 0.1679 0.1778 REMARK 3 10 2.5316 - 2.4442 1.00 2510 122 0.1876 0.2138 REMARK 3 11 2.4442 - 2.3678 1.00 2476 142 0.2037 0.2599 REMARK 3 12 2.3678 - 2.3001 1.00 2527 126 0.2273 0.2442 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 2581 REMARK 3 ANGLE : 1.081 3524 REMARK 3 CHIRALITY : 0.065 389 REMARK 3 PLANARITY : 0.005 461 REMARK 3 DIHEDRAL : 13.381 928 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7327 -24.9382 -17.0493 REMARK 3 T TENSOR REMARK 3 T11: 0.2533 T22: 0.1641 REMARK 3 T33: 0.2360 T12: -0.0719 REMARK 3 T13: 0.0246 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 0.2181 L22: 0.2202 REMARK 3 L33: 0.3476 L12: 0.0030 REMARK 3 L13: -0.2075 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: 0.0542 S12: 0.0231 S13: -0.2002 REMARK 3 S21: -0.0354 S22: -0.2170 S23: -0.0191 REMARK 3 S31: 0.2900 S32: -0.1771 S33: -0.0250 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.6024 -23.6424 -21.6095 REMARK 3 T TENSOR REMARK 3 T11: 0.2434 T22: 0.1984 REMARK 3 T33: 0.2477 T12: 0.0358 REMARK 3 T13: 0.0156 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.1363 L22: 0.0953 REMARK 3 L33: 0.0690 L12: 0.0020 REMARK 3 L13: -0.1129 L23: 0.0270 REMARK 3 S TENSOR REMARK 3 S11: 0.1589 S12: -0.0245 S13: -0.0774 REMARK 3 S21: -0.0227 S22: -0.2032 S23: 0.0279 REMARK 3 S31: 0.3577 S32: -0.0110 S33: -0.0003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3462 -16.3480 -24.0238 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.2135 REMARK 3 T33: 0.2178 T12: -0.0213 REMARK 3 T13: -0.0060 T23: -0.0855 REMARK 3 L TENSOR REMARK 3 L11: 0.3218 L22: 0.3778 REMARK 3 L33: 0.3779 L12: -0.3284 REMARK 3 L13: 0.3326 L23: -0.3782 REMARK 3 S TENSOR REMARK 3 S11: 0.0353 S12: 0.0788 S13: 0.2878 REMARK 3 S21: -0.2154 S22: -0.2361 S23: 0.2886 REMARK 3 S31: 0.0846 S32: -0.2053 S33: -0.0973 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.6477 -9.1279 -8.0957 REMARK 3 T TENSOR REMARK 3 T11: 0.1750 T22: 0.1644 REMARK 3 T33: 0.1221 T12: -0.0737 REMARK 3 T13: 0.0148 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.4436 L22: 0.5429 REMARK 3 L33: 0.7419 L12: 0.1916 REMARK 3 L13: -0.1980 L23: 0.0537 REMARK 3 S TENSOR REMARK 3 S11: 0.0850 S12: -0.1888 S13: 0.1464 REMARK 3 S21: 0.0989 S22: -0.3504 S23: 0.0620 REMARK 3 S31: 0.2806 S32: -0.2173 S33: -0.3386 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.7930 -14.1172 -8.2920 REMARK 3 T TENSOR REMARK 3 T11: 0.1488 T22: 0.2731 REMARK 3 T33: 0.2490 T12: -0.0382 REMARK 3 T13: -0.0293 T23: 0.0773 REMARK 3 L TENSOR REMARK 3 L11: 0.0659 L22: 0.6548 REMARK 3 L33: 0.8590 L12: -0.1505 REMARK 3 L13: -0.0913 L23: -0.1588 REMARK 3 S TENSOR REMARK 3 S11: -0.1004 S12: -0.1953 S13: 0.2364 REMARK 3 S21: 0.0112 S22: -0.0515 S23: -0.3315 REMARK 3 S31: 0.1983 S32: 0.3484 S33: -0.0162 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4208 -7.9836 -4.7368 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.1998 REMARK 3 T33: 0.1922 T12: -0.0748 REMARK 3 T13: 0.0544 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 0.1578 L22: 0.5062 REMARK 3 L33: 0.4162 L12: -0.2400 REMARK 3 L13: 0.0248 L23: 0.0154 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: -0.0644 S13: 0.0263 REMARK 3 S21: 0.2733 S22: -0.2063 S23: 0.2299 REMARK 3 S31: 0.1011 S32: -0.1715 S33: -0.0376 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.3968 -33.8995 -21.6480 REMARK 3 T TENSOR REMARK 3 T11: 0.4661 T22: 0.0249 REMARK 3 T33: 0.2922 T12: 0.0362 REMARK 3 T13: 0.0502 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 0.5883 L22: 0.7451 REMARK 3 L33: 0.8821 L12: -0.1707 REMARK 3 L13: 0.4768 L23: 0.4817 REMARK 3 S TENSOR REMARK 3 S11: 0.2121 S12: -0.1337 S13: -0.2901 REMARK 3 S21: -0.0498 S22: -0.2297 S23: 0.3189 REMARK 3 S31: 0.7003 S32: -0.2314 S33: 0.0618 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 242 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.6117 -16.3500 -34.3713 REMARK 3 T TENSOR REMARK 3 T11: 0.2365 T22: 0.1799 REMARK 3 T33: 0.1541 T12: 0.0811 REMARK 3 T13: 0.0621 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 0.3150 L22: 0.4512 REMARK 3 L33: 0.6883 L12: 0.1051 REMARK 3 L13: 0.0363 L23: 0.1887 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: 0.1816 S13: 0.0689 REMARK 3 S21: -0.2001 S22: -0.1716 S23: -0.0811 REMARK 3 S31: 0.0415 S32: 0.1656 S33: -0.1251 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KF9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000079264. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX 225 HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32015 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 96.585 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : 0.12400 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.80200 REMARK 200 R SYM FOR SHELL (I) : 0.80200 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3IC8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 5 MM REMARK 280 GSH), RESERVOIR (0.2 M ZINC ACETATE, 0.1 M SODIUM ACETATE PH 4.5, REMARK 280 10 %(W/V) PEG 3000), CRYOPROTECTION (RESERVOIR + 20% GLYCEROL), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.99233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.98467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.98467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.99233 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -217.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -32.99233 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 622 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 715 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 320 REMARK 465 ALA A 321 REMARK 465 GLY A 322 REMARK 465 ALA A 323 REMARK 465 GLU A 324 REMARK 465 ASN A 325 REMARK 465 LEU A 326 REMARK 465 TYR A 327 REMARK 465 PHE A 328 REMARK 465 GLN A 329 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 67 130.35 79.42 REMARK 500 THR A 102 -88.82 -117.11 REMARK 500 ARG A 148 42.27 -141.65 REMARK 500 ALA A 225 -147.21 55.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE2 REMARK 620 2 GLU A 18 OE1 58.9 REMARK 620 3 HIS A 224 NE2 103.1 86.4 REMARK 620 4 ACT A 407 O 86.8 141.3 84.6 REMARK 620 5 ACT A 407 OXT 90.5 133.6 137.4 55.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GSH A 405 SG2 REMARK 620 2 ACT A 406 OXT 115.7 REMARK 620 3 ACT A 408 O 115.5 89.1 REMARK 620 4 HOH A 501 O 128.9 94.8 104.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-501780 RELATED DB: TARGETTRACK DBREF 4KF9 A 1 329 PDB 4KF9 4KF9 1 329 SEQRES 1 A 329 MET VAL MET THR GLU LEU ILE LEU HIS HIS TYR ALA THR SEQRES 2 A 329 SER PRO PHE SER GLU LYS ALA ARG LEU ILE LEU GLY TYR SEQRES 3 A 329 LYS ASP GLN PRO TRP LYS SER VAL THR VAL PRO VAL ILE SEQRES 4 A 329 LEU PRO LYS PRO ASP VAL MET PRO LEU THR GLY GLY TYR SEQRES 5 A 329 ARG ARG THR PRO PHE LEU GLN ILE GLY ALA ASP ILE TYR SEQRES 6 A 329 CYS ASP THR ALA LEU ILE ALA GLN VAL LEU GLU SER ILE SEQRES 7 A 329 HIS PRO VAL PRO THR LEU TYR PRO ALA ASP ARG ALA ALA SEQRES 8 A 329 ALA ALA PHE ALA MET ALA GLN TRP ALA ASP THR THR LEU SEQRES 9 A 329 PHE TRP ALA ALA ALA SER PHE VAL GLY GLN PRO GLU GLY SEQRES 10 A 329 PHE LYS SER LEU MET ALA GLY LEU PRO GLU ASP PHE VAL SEQRES 11 A 329 LYS ALA PHE VAL GLU ASP ARG LYS ALA MET ARG ALA GLY SEQRES 12 A 329 GLY THR GLY LEU ARG THR PRO LEU PRO GLU ALA VAL ALA SEQRES 13 A 329 THR LEU GLN VAL PHE LEU ALA GLN LEU GLU ARG GLN PHE SEQRES 14 A 329 ALA THR GLY GLU HIS ILE PHE LEU PHE GLY GLU GLN PRO SEQRES 15 A 329 THR ILE ALA ASP PHE SER VAL TYR HIS ALA LEU TRP PHE SEQRES 16 A 329 ILE ARG ARG ALA THR ALA VAL ALA GLY ILE LEU ASP ALA SEQRES 17 A 329 HIS PRO GLU VAL VAL ALA TRP MET HIS ARG MET ALA GLY SEQRES 18 A 329 PHE GLY HIS ALA GLN ALA GLN PRO MET THR PRO ALA GLU SEQRES 19 A 329 ALA LEU ALA ILE ALA ARG ALA ALA THR PRO ARG ALA LEU SEQRES 20 A 329 THR ASP ALA GLY ALA GLY ALA ASP PHE ASP ALA ARG TYR SEQRES 21 A 329 GLY LEU PRO LYS GLY THR ARG VAL THR VAL ALA ALA THR SEQRES 22 A 329 ASP TYR ALA VAL ASP PRO VAL GLU GLY ASP LEU VAL VAL SEQRES 23 A 329 SER THR ARG ASP ALA VAL GLY VAL LEU ARG GLU ASP PRO SEQRES 24 A 329 ARG VAL GLY GLN VAL VAL VAL HIS PHE PRO ARG VAL GLY SEQRES 25 A 329 TYR ALA VAL ARG LYS VAL GLU PRO ALA GLY ALA GLU ASN SEQRES 26 A 329 LEU TYR PHE GLN HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET GSH A 405 20 HET ACT A 406 4 HET ACT A 407 4 HET ACT A 408 4 HETNAM ZN ZINC ION HETNAM GSH GLUTATHIONE HETNAM ACT ACETATE ION FORMUL 2 ZN 4(ZN 2+) FORMUL 6 GSH C10 H17 N3 O6 S FORMUL 7 ACT 3(C2 H3 O2 1-) FORMUL 10 HOH *252(H2 O) HELIX 1 1 SER A 14 LYS A 27 1 14 HELIX 2 2 VAL A 45 GLY A 50 1 6 HELIX 3 3 ASP A 67 HIS A 79 1 13 HELIX 4 4 PRO A 86 ASP A 88 5 3 HELIX 5 5 ARG A 89 THR A 102 1 14 HELIX 6 6 THR A 102 GLN A 114 1 13 HELIX 7 7 GLN A 114 MET A 122 1 9 HELIX 8 8 PRO A 126 ARG A 141 1 16 HELIX 9 9 PRO A 150 THR A 171 1 22 HELIX 10 10 THR A 183 ALA A 199 1 17 HELIX 11 11 THR A 200 VAL A 202 5 3 HELIX 12 12 ALA A 203 ALA A 208 1 6 HELIX 13 13 HIS A 209 GLY A 221 1 13 HELIX 14 14 THR A 231 ALA A 242 1 12 HELIX 15 15 PRO A 244 THR A 248 5 5 HELIX 16 16 ALA A 250 ALA A 254 5 5 SHEET 1 A10 ALA A 227 PRO A 229 0 SHEET 2 A10 TRP A 31 THR A 35 1 N SER A 33 O GLN A 228 SHEET 3 A10 ILE A 7 HIS A 10 1 N LEU A 8 O VAL A 34 SHEET 4 A10 PHE A 57 ILE A 60 -1 O GLN A 59 N ILE A 7 SHEET 5 A10 ASP A 63 CYS A 66 -1 O TYR A 65 N LEU A 58 SHEET 6 A10 GLY A 302 PRO A 309 1 O HIS A 307 N ILE A 64 SHEET 7 A10 ALA A 291 ASP A 298 -1 N ARG A 296 O VAL A 304 SHEET 8 A10 VAL A 280 SER A 287 -1 N ASP A 283 O LEU A 295 SHEET 9 A10 ARG A 267 ALA A 272 -1 N VAL A 268 O GLY A 282 SHEET 10 A10 TYR A 313 LYS A 317 -1 O ARG A 316 N THR A 269 LINK OE2 GLU A 18 ZN ZN A 401 1555 1555 2.18 LINK OE1 GLU A 18 ZN ZN A 401 1555 1555 2.23 LINK NE2 HIS A 79 ZN ZN A 403 1555 1555 2.06 LINK NE2 HIS A 224 ZN ZN A 401 1555 1555 2.07 LINK OE1 GLU A 234 ZN ZN A 404 1555 1555 2.06 LINK ZN ZN A 401 O ACT A 407 1555 1555 1.81 LINK ZN ZN A 401 OXT ACT A 407 1555 1555 2.48 LINK ZN ZN A 402 SG2 GSH A 405 1555 1555 2.33 LINK ZN ZN A 402 OXT ACT A 406 1555 1555 2.08 LINK ZN ZN A 402 O ACT A 408 1555 1555 2.01 LINK ZN ZN A 402 O HOH A 501 1555 1555 2.11 CISPEP 1 LEU A 40 PRO A 41 0 2.91 CISPEP 2 THR A 55 PRO A 56 0 4.39 CISPEP 3 VAL A 81 PRO A 82 0 0.84 SITE 1 AC1 4 GLU A 18 HIS A 224 GLU A 297 ACT A 407 SITE 1 AC2 5 PRO A 15 GSH A 405 ACT A 406 ACT A 408 SITE 2 AC2 5 HOH A 501 SITE 1 AC3 1 HIS A 79 SITE 1 AC4 2 GLU A 234 ASP A 249 SITE 1 AC5 20 TYR A 11 SER A 14 PRO A 15 PHE A 16 SITE 2 AC5 20 VAL A 38 LYS A 42 ARG A 53 ARG A 54 SITE 3 AC5 20 THR A 55 ASP A 67 THR A 68 ARG A 137 SITE 4 AC5 20 MET A 140 TYR A 275 ZN A 402 ACT A 406 SITE 5 AC5 20 ACT A 408 HOH A 502 HOH A 504 HOH A 599 SITE 1 AC6 7 ARG A 137 MET A 140 ZN A 402 GSH A 405 SITE 2 AC6 7 ACT A 408 HOH A 501 HOH A 696 SITE 1 AC7 6 GLU A 18 ARG A 21 HIS A 224 GLU A 297 SITE 2 AC7 6 GLN A 303 ZN A 401 SITE 1 AC8 9 TYR A 11 THR A 13 PHE A 133 ARG A 137 SITE 2 AC8 9 PHE A 195 ZN A 402 GSH A 405 ACT A 406 SITE 3 AC8 9 HOH A 501 CRYST1 111.527 111.527 98.977 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008966 0.005177 0.000000 0.00000 SCALE2 0.000000 0.010354 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010103 0.00000