data_4KMN # _entry.id 4KMN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4KMN pdb_00004kmn 10.2210/pdb4kmn/pdb RCSB RCSB079528 ? ? WWPDB D_1000079528 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4KMP _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4KMN _pdbx_database_status.recvd_initial_deposition_date 2013-05-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, X.' 1 'Wang, J.' 2 'Condon, S.M.' 3 'Shi, Y.' 4 # _citation.id primary _citation.title 'Structure of cIAP1-BIR3 and inhibitor' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, X.' 1 ? primary 'Wang, J.' 2 ? primary 'Condon, S.M.' 3 ? primary 'Shi, Y.' 4 ? # _cell.entry_id 4KMN _cell.length_a 67.714 _cell.length_b 67.714 _cell.length_c 66.913 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4KMN _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Baculoviral IAP repeat-containing protein 2' 11822.384 1 6.3.2.- ? 'UNP residues 260-357' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn ;(2S)-N-{(2R)-1-[(2R,4S)-2-{[6,6'-difluoro-3'-({(2R,4S)-4-hydroxy-1-[(2S)-2-{[(2S)-2-(methylamino)propanoyl]amino}butanoyl]pyrrolidin-2-yl}methyl)-1H,1'H-2,2'-biindol-3-yl]methyl}-4-hydroxypyrrolidin-1-yl]-1-oxobutan-2-yl}-2-(methylamino)propanamide ; 806.941 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 water nat water 18.015 120 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;C-IAP1, IAP homolog B, Inhibitor of apoptosis protein 2, IAP-2, hIAP-2, hIAP2, RING finger protein 48, TNFR2-TRAF-signaling complex protein 2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAASISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFL IRMKGQEFVDEIQGRYPHLLEAA ; _entity_poly.pdbx_seq_one_letter_code_can ;AAASISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFL IRMKGQEFVDEIQGRYPHLLEAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 ALA n 1 4 SER n 1 5 ILE n 1 6 SER n 1 7 ASN n 1 8 LEU n 1 9 SER n 1 10 MET n 1 11 GLN n 1 12 THR n 1 13 HIS n 1 14 ALA n 1 15 ALA n 1 16 ARG n 1 17 MET n 1 18 ARG n 1 19 THR n 1 20 PHE n 1 21 MET n 1 22 TYR n 1 23 TRP n 1 24 PRO n 1 25 SER n 1 26 SER n 1 27 VAL n 1 28 PRO n 1 29 VAL n 1 30 GLN n 1 31 PRO n 1 32 GLU n 1 33 GLN n 1 34 LEU n 1 35 ALA n 1 36 SER n 1 37 ALA n 1 38 GLY n 1 39 PHE n 1 40 TYR n 1 41 TYR n 1 42 VAL n 1 43 GLY n 1 44 ARG n 1 45 ASN n 1 46 ASP n 1 47 ASP n 1 48 VAL n 1 49 LYS n 1 50 CYS n 1 51 PHE n 1 52 CYS n 1 53 CYS n 1 54 ASP n 1 55 GLY n 1 56 GLY n 1 57 LEU n 1 58 ARG n 1 59 CYS n 1 60 TRP n 1 61 GLU n 1 62 SER n 1 63 GLY n 1 64 ASP n 1 65 ASP n 1 66 PRO n 1 67 TRP n 1 68 VAL n 1 69 GLU n 1 70 HIS n 1 71 ALA n 1 72 LYS n 1 73 TRP n 1 74 PHE n 1 75 PRO n 1 76 ARG n 1 77 CYS n 1 78 GLU n 1 79 PHE n 1 80 LEU n 1 81 ILE n 1 82 ARG n 1 83 MET n 1 84 LYS n 1 85 GLY n 1 86 GLN n 1 87 GLU n 1 88 PHE n 1 89 VAL n 1 90 ASP n 1 91 GLU n 1 92 ILE n 1 93 GLN n 1 94 GLY n 1 95 ARG n 1 96 TYR n 1 97 PRO n 1 98 HIS n 1 99 LEU n 1 100 LEU n 1 101 GLU n 1 102 ALA n 1 103 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BIRC2, API1, IAP2, MIHB, RNF48' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BIRC2_HUMAN _struct_ref.pdbx_db_accession Q13490 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRM KGQEFVDEIQGRYPHLLE ; _struct_ref.pdbx_align_begin 260 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4KMN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13490 _struct_ref_seq.db_align_beg 260 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 357 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 254 _struct_ref_seq.pdbx_auth_seq_align_end 351 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4KMN ALA A 1 ? UNP Q13490 ? ? 'expression tag' 251 1 1 4KMN ALA A 2 ? UNP Q13490 ? ? 'expression tag' 252 2 1 4KMN ALA A 3 ? UNP Q13490 ? ? 'expression tag' 253 3 1 4KMN ALA A 102 ? UNP Q13490 ? ? 'expression tag' 352 4 1 4KMN ALA A 103 ? UNP Q13490 ? ? 'expression tag' 353 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 436 non-polymer . ;(2S)-N-{(2R)-1-[(2R,4S)-2-{[6,6'-difluoro-3'-({(2R,4S)-4-hydroxy-1-[(2S)-2-{[(2S)-2-(methylamino)propanoyl]amino}butanoyl]pyrrolidin-2-yl}methyl)-1H,1'H-2,2'-biindol-3-yl]methyl}-4-hydroxypyrrolidin-1-yl]-1-oxobutan-2-yl}-2-(methylamino)propanamide ; ? 'C42 H56 F2 N8 O6' 806.941 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4KMN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.75 _exptl_crystal.density_percent_sol 67.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details '1M Na/K phosphate pH6.9, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2010-01-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 4KMN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.21 _reflns.d_resolution_high 1.52 _reflns.number_obs 26150 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4KMN _refine.ls_number_reflns_obs 26069 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.210 _refine.ls_d_res_high 1.523 _refine.ls_percent_reflns_obs 94.48 _refine.ls_R_factor_obs 0.1613 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1595 _refine.ls_R_factor_R_free 0.1991 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 1321 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 35.0843 _refine.aniso_B[1][1] 2.0985 _refine.aniso_B[2][2] 2.0985 _refine.aniso_B[3][3] -4.1971 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.457 _refine.solvent_model_param_bsol 60.162 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 1G73 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.15 _refine.overall_FOM_work_R_set 0.8701 _refine.B_iso_max 78.460 _refine.B_iso_min 17.640 _refine.pdbx_overall_phase_error 19.3800 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 828 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 64 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 1012 _refine_hist.d_res_high 1.523 _refine_hist.d_res_low 30.210 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 921 ? 'X-RAY DIFFRACTION' f_angle_d 1.558 ? ? 1255 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.328 ? ? 327 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.069 ? ? 121 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 160 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 9 1.5228 1.5838 1831 0.2666 64.00 0.3121 . . 96 . . . . 'X-RAY DIFFRACTION' 9 1.5838 1.6559 2564 0.2340 91.00 0.3088 . . 168 . . . . 'X-RAY DIFFRACTION' 9 1.6559 1.7431 2854 0.1800 99.00 0.2092 . . 159 . . . . 'X-RAY DIFFRACTION' 9 1.7431 1.8523 2867 0.1412 100.00 0.1841 . . 148 . . . . 'X-RAY DIFFRACTION' 9 1.8523 1.9953 2893 0.1314 100.00 0.1644 . . 151 . . . . 'X-RAY DIFFRACTION' 9 1.9953 2.1961 2898 0.1244 100.00 0.1605 . . 154 . . . . 'X-RAY DIFFRACTION' 9 2.1961 2.5137 2922 0.1267 100.00 0.1748 . . 153 . . . . 'X-RAY DIFFRACTION' 9 2.5137 3.1665 2941 0.1395 100.00 0.2020 . . 148 . . . . 'X-RAY DIFFRACTION' 9 3.1665 30.2159 2978 0.1776 97.00 0.1998 . . 144 . . . . # _struct.entry_id 4KMN _struct.title 'Structure of cIAP1-BIR3 and inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KMN _struct_keywords.pdbx_keywords 'LIGASE/LIGASE INHIBITOR' _struct_keywords.text 'apoptosis, cIAP1-BIR3, LIGASE-LIGASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 7 ? GLN A 11 ? ASN A 257 GLN A 261 5 ? 5 HELX_P HELX_P2 2 THR A 12 ? THR A 19 ? THR A 262 THR A 269 1 ? 8 HELX_P HELX_P3 3 PHE A 20 ? TRP A 23 ? PHE A 270 TRP A 273 5 ? 4 HELX_P HELX_P4 4 GLN A 30 ? ALA A 37 ? GLN A 280 ALA A 287 1 ? 8 HELX_P HELX_P5 5 ASP A 65 ? PHE A 74 ? ASP A 315 PHE A 324 1 ? 10 HELX_P HELX_P6 6 CYS A 77 ? GLY A 85 ? CYS A 327 GLY A 335 1 ? 9 HELX_P HELX_P7 7 GLY A 85 ? TYR A 96 ? GLY A 335 TYR A 346 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 50 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 300 A ZN 501 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc2 metalc ? ? A CYS 53 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 303 A ZN 501 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc3 metalc ? ? A HIS 70 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 320 A ZN 501 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc4 metalc ? ? A CYS 77 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 327 A ZN 501 1_555 ? ? ? ? ? ? ? 2.263 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 96 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 346 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 97 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 347 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.89 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 39 ? TYR A 41 ? PHE A 289 TYR A 291 A 2 VAL A 48 ? CYS A 50 ? VAL A 298 CYS A 300 A 3 GLY A 56 ? LEU A 57 ? GLY A 306 LEU A 307 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 40 ? N TYR A 290 O LYS A 49 ? O LYS A 299 A 2 3 N VAL A 48 ? N VAL A 298 O LEU A 57 ? O LEU A 307 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software A 436 502 ? 15 'BINDING SITE FOR RESIDUE 436 A 502' AC3 Software A PO4 503 ? 5 'BINDING SITE FOR RESIDUE PO4 A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 50 ? CYS A 300 . ? 1_555 ? 2 AC1 4 CYS A 53 ? CYS A 303 . ? 1_555 ? 3 AC1 4 HIS A 70 ? HIS A 320 . ? 1_555 ? 4 AC1 4 CYS A 77 ? CYS A 327 . ? 1_555 ? 5 AC2 15 ARG A 44 ? ARG A 294 . ? 1_555 ? 6 AC2 15 LYS A 49 ? LYS A 299 . ? 1_555 ? 7 AC2 15 GLY A 56 ? GLY A 306 . ? 1_555 ? 8 AC2 15 LEU A 57 ? LEU A 307 . ? 1_555 ? 9 AC2 15 ARG A 58 ? ARG A 308 . ? 1_555 ? 10 AC2 15 CYS A 59 ? CYS A 309 . ? 1_555 ? 11 AC2 15 ASP A 64 ? ASP A 314 . ? 1_555 ? 12 AC2 15 GLU A 69 ? GLU A 319 . ? 1_555 ? 13 AC2 15 LYS A 72 ? LYS A 322 . ? 5_675 ? 14 AC2 15 TRP A 73 ? TRP A 323 . ? 5_675 ? 15 AC2 15 TRP A 73 ? TRP A 323 . ? 1_555 ? 16 AC2 15 PHE A 74 ? PHE A 324 . ? 5_675 ? 17 AC2 15 PO4 D . ? PO4 A 503 . ? 1_555 ? 18 AC2 15 HOH E . ? HOH A 686 . ? 1_555 ? 19 AC2 15 HOH E . ? HOH A 714 . ? 1_555 ? 20 AC3 5 ARG A 44 ? ARG A 294 . ? 1_555 ? 21 AC3 5 LYS A 49 ? LYS A 299 . ? 1_555 ? 22 AC3 5 436 C . ? 436 A 502 . ? 1_555 ? 23 AC3 5 HOH E . ? HOH A 674 . ? 1_555 ? 24 AC3 5 HOH E . ? HOH A 680 . ? 1_555 ? # _database_PDB_matrix.entry_id 4KMN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4KMN _atom_sites.fract_transf_matrix[1][1] 0.014768 _atom_sites.fract_transf_matrix[1][2] 0.008526 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017053 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014945 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F H N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 251 251 ALA ALA A . n A 1 2 ALA 2 252 252 ALA ALA A . n A 1 3 ALA 3 253 253 ALA ALA A . n A 1 4 SER 4 254 254 SER SER A . n A 1 5 ILE 5 255 255 ILE ILE A . n A 1 6 SER 6 256 256 SER SER A . n A 1 7 ASN 7 257 257 ASN ASN A . n A 1 8 LEU 8 258 258 LEU LEU A . n A 1 9 SER 9 259 259 SER SER A . n A 1 10 MET 10 260 260 MET MET A . n A 1 11 GLN 11 261 261 GLN GLN A . n A 1 12 THR 12 262 262 THR THR A . n A 1 13 HIS 13 263 263 HIS HIS A . n A 1 14 ALA 14 264 264 ALA ALA A . n A 1 15 ALA 15 265 265 ALA ALA A . n A 1 16 ARG 16 266 266 ARG ARG A . n A 1 17 MET 17 267 267 MET MET A . n A 1 18 ARG 18 268 268 ARG ARG A . n A 1 19 THR 19 269 269 THR THR A . n A 1 20 PHE 20 270 270 PHE PHE A . n A 1 21 MET 21 271 271 MET MET A . n A 1 22 TYR 22 272 272 TYR TYR A . n A 1 23 TRP 23 273 273 TRP TRP A . n A 1 24 PRO 24 274 274 PRO PRO A . n A 1 25 SER 25 275 275 SER SER A . n A 1 26 SER 26 276 276 SER SER A . n A 1 27 VAL 27 277 277 VAL VAL A . n A 1 28 PRO 28 278 278 PRO PRO A . n A 1 29 VAL 29 279 279 VAL VAL A . n A 1 30 GLN 30 280 280 GLN GLN A . n A 1 31 PRO 31 281 281 PRO PRO A . n A 1 32 GLU 32 282 282 GLU GLU A . n A 1 33 GLN 33 283 283 GLN GLN A . n A 1 34 LEU 34 284 284 LEU LEU A . n A 1 35 ALA 35 285 285 ALA ALA A . n A 1 36 SER 36 286 286 SER SER A . n A 1 37 ALA 37 287 287 ALA ALA A . n A 1 38 GLY 38 288 288 GLY GLY A . n A 1 39 PHE 39 289 289 PHE PHE A . n A 1 40 TYR 40 290 290 TYR TYR A . n A 1 41 TYR 41 291 291 TYR TYR A . n A 1 42 VAL 42 292 292 VAL VAL A . n A 1 43 GLY 43 293 293 GLY GLY A . n A 1 44 ARG 44 294 294 ARG ARG A . n A 1 45 ASN 45 295 295 ASN ASN A . n A 1 46 ASP 46 296 296 ASP ASP A . n A 1 47 ASP 47 297 297 ASP ASP A . n A 1 48 VAL 48 298 298 VAL VAL A . n A 1 49 LYS 49 299 299 LYS LYS A . n A 1 50 CYS 50 300 300 CYS CYS A . n A 1 51 PHE 51 301 301 PHE PHE A . n A 1 52 CYS 52 302 302 CYS CYS A . n A 1 53 CYS 53 303 303 CYS CYS A . n A 1 54 ASP 54 304 304 ASP ASP A . n A 1 55 GLY 55 305 305 GLY GLY A . n A 1 56 GLY 56 306 306 GLY GLY A . n A 1 57 LEU 57 307 307 LEU LEU A . n A 1 58 ARG 58 308 308 ARG ARG A . n A 1 59 CYS 59 309 309 CYS CYS A . n A 1 60 TRP 60 310 310 TRP TRP A . n A 1 61 GLU 61 311 311 GLU GLU A . n A 1 62 SER 62 312 312 SER SER A . n A 1 63 GLY 63 313 313 GLY GLY A . n A 1 64 ASP 64 314 314 ASP ASP A . n A 1 65 ASP 65 315 315 ASP ASP A . n A 1 66 PRO 66 316 316 PRO PRO A . n A 1 67 TRP 67 317 317 TRP TRP A . n A 1 68 VAL 68 318 318 VAL VAL A . n A 1 69 GLU 69 319 319 GLU GLU A . n A 1 70 HIS 70 320 320 HIS HIS A . n A 1 71 ALA 71 321 321 ALA ALA A . n A 1 72 LYS 72 322 322 LYS LYS A . n A 1 73 TRP 73 323 323 TRP TRP A . n A 1 74 PHE 74 324 324 PHE PHE A . n A 1 75 PRO 75 325 325 PRO PRO A . n A 1 76 ARG 76 326 326 ARG ARG A . n A 1 77 CYS 77 327 327 CYS CYS A . n A 1 78 GLU 78 328 328 GLU GLU A . n A 1 79 PHE 79 329 329 PHE PHE A . n A 1 80 LEU 80 330 330 LEU LEU A . n A 1 81 ILE 81 331 331 ILE ILE A . n A 1 82 ARG 82 332 332 ARG ARG A . n A 1 83 MET 83 333 333 MET MET A . n A 1 84 LYS 84 334 334 LYS LYS A . n A 1 85 GLY 85 335 335 GLY GLY A . n A 1 86 GLN 86 336 336 GLN GLN A . n A 1 87 GLU 87 337 337 GLU GLU A . n A 1 88 PHE 88 338 338 PHE PHE A . n A 1 89 VAL 89 339 339 VAL VAL A . n A 1 90 ASP 90 340 340 ASP ASP A . n A 1 91 GLU 91 341 341 GLU GLU A . n A 1 92 ILE 92 342 342 ILE ILE A . n A 1 93 GLN 93 343 343 GLN GLN A . n A 1 94 GLY 94 344 344 GLY GLY A . n A 1 95 ARG 95 345 345 ARG ARG A . n A 1 96 TYR 96 346 346 TYR TYR A . n A 1 97 PRO 97 347 347 PRO PRO A . n A 1 98 HIS 98 348 348 HIS HIS A . n A 1 99 LEU 99 349 349 LEU LEU A . n A 1 100 LEU 100 350 350 LEU LEU A . n A 1 101 GLU 101 351 351 GLU GLU A . n A 1 102 ALA 102 352 352 ALA ALA A . n A 1 103 ALA 103 353 353 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 501 ZN ZN A . C 3 436 1 502 1 436 436 A . D 4 PO4 1 503 1 PO4 PO4 A . E 5 HOH 1 601 1 HOH HOH A . E 5 HOH 2 602 2 HOH HOH A . E 5 HOH 3 603 3 HOH HOH A . E 5 HOH 4 604 4 HOH HOH A . E 5 HOH 5 605 5 HOH HOH A . E 5 HOH 6 606 6 HOH HOH A . E 5 HOH 7 607 7 HOH HOH A . E 5 HOH 8 608 8 HOH HOH A . E 5 HOH 9 609 9 HOH HOH A . E 5 HOH 10 610 10 HOH HOH A . E 5 HOH 11 611 11 HOH HOH A . E 5 HOH 12 612 12 HOH HOH A . E 5 HOH 13 613 13 HOH HOH A . E 5 HOH 14 614 14 HOH HOH A . E 5 HOH 15 615 15 HOH HOH A . E 5 HOH 16 616 16 HOH HOH A . E 5 HOH 17 617 17 HOH HOH A . E 5 HOH 18 618 18 HOH HOH A . E 5 HOH 19 619 19 HOH HOH A . E 5 HOH 20 620 20 HOH HOH A . E 5 HOH 21 621 21 HOH HOH A . E 5 HOH 22 622 22 HOH HOH A . E 5 HOH 23 623 23 HOH HOH A . E 5 HOH 24 624 24 HOH HOH A . E 5 HOH 25 625 25 HOH HOH A . E 5 HOH 26 626 26 HOH HOH A . E 5 HOH 27 627 27 HOH HOH A . E 5 HOH 28 628 28 HOH HOH A . E 5 HOH 29 629 29 HOH HOH A . E 5 HOH 30 630 30 HOH HOH A . E 5 HOH 31 631 31 HOH HOH A . E 5 HOH 32 632 32 HOH HOH A . E 5 HOH 33 633 33 HOH HOH A . E 5 HOH 34 634 34 HOH HOH A . E 5 HOH 35 635 35 HOH HOH A . E 5 HOH 36 636 36 HOH HOH A . E 5 HOH 37 637 37 HOH HOH A . E 5 HOH 38 638 38 HOH HOH A . E 5 HOH 39 639 39 HOH HOH A . E 5 HOH 40 640 40 HOH HOH A . E 5 HOH 41 641 41 HOH HOH A . E 5 HOH 42 642 42 HOH HOH A . E 5 HOH 43 643 43 HOH HOH A . E 5 HOH 44 644 44 HOH HOH A . E 5 HOH 45 645 45 HOH HOH A . E 5 HOH 46 646 46 HOH HOH A . E 5 HOH 47 647 47 HOH HOH A . E 5 HOH 48 648 48 HOH HOH A . E 5 HOH 49 649 49 HOH HOH A . E 5 HOH 50 650 50 HOH HOH A . E 5 HOH 51 651 51 HOH HOH A . E 5 HOH 52 652 52 HOH HOH A . E 5 HOH 53 653 53 HOH HOH A . E 5 HOH 54 654 54 HOH HOH A . E 5 HOH 55 655 55 HOH HOH A . E 5 HOH 56 656 56 HOH HOH A . E 5 HOH 57 657 57 HOH HOH A . E 5 HOH 58 658 58 HOH HOH A . E 5 HOH 59 659 59 HOH HOH A . E 5 HOH 60 660 60 HOH HOH A . E 5 HOH 61 661 61 HOH HOH A . E 5 HOH 62 662 62 HOH HOH A . E 5 HOH 63 663 63 HOH HOH A . E 5 HOH 64 664 64 HOH HOH A . E 5 HOH 65 665 65 HOH HOH A . E 5 HOH 66 666 66 HOH HOH A . E 5 HOH 67 667 67 HOH HOH A . E 5 HOH 68 668 68 HOH HOH A . E 5 HOH 69 669 69 HOH HOH A . E 5 HOH 70 670 70 HOH HOH A . E 5 HOH 71 671 71 HOH HOH A . E 5 HOH 72 672 72 HOH HOH A . E 5 HOH 73 673 73 HOH HOH A . E 5 HOH 74 674 74 HOH HOH A . E 5 HOH 75 675 75 HOH HOH A . E 5 HOH 76 676 76 HOH HOH A . E 5 HOH 77 677 77 HOH HOH A . E 5 HOH 78 678 78 HOH HOH A . E 5 HOH 79 679 79 HOH HOH A . E 5 HOH 80 680 80 HOH HOH A . E 5 HOH 81 681 81 HOH HOH A . E 5 HOH 82 682 82 HOH HOH A . E 5 HOH 83 683 83 HOH HOH A . E 5 HOH 84 684 84 HOH HOH A . E 5 HOH 85 685 85 HOH HOH A . E 5 HOH 86 686 86 HOH HOH A . E 5 HOH 87 687 87 HOH HOH A . E 5 HOH 88 688 88 HOH HOH A . E 5 HOH 89 689 89 HOH HOH A . E 5 HOH 90 690 90 HOH HOH A . E 5 HOH 91 691 91 HOH HOH A . E 5 HOH 92 692 92 HOH HOH A . E 5 HOH 93 693 93 HOH HOH A . E 5 HOH 94 694 94 HOH HOH A . E 5 HOH 95 695 95 HOH HOH A . E 5 HOH 96 696 96 HOH HOH A . E 5 HOH 97 697 97 HOH HOH A . E 5 HOH 98 698 98 HOH HOH A . E 5 HOH 99 699 99 HOH HOH A . E 5 HOH 100 700 100 HOH HOH A . E 5 HOH 101 701 101 HOH HOH A . E 5 HOH 102 702 102 HOH HOH A . E 5 HOH 103 703 103 HOH HOH A . E 5 HOH 104 704 104 HOH HOH A . E 5 HOH 105 705 105 HOH HOH A . E 5 HOH 106 706 106 HOH HOH A . E 5 HOH 107 707 107 HOH HOH A . E 5 HOH 108 708 108 HOH HOH A . E 5 HOH 109 709 109 HOH HOH A . E 5 HOH 110 710 110 HOH HOH A . E 5 HOH 111 711 111 HOH HOH A . E 5 HOH 112 712 112 HOH HOH A . E 5 HOH 113 713 113 HOH HOH A . E 5 HOH 114 714 114 HOH HOH A . E 5 HOH 115 715 115 HOH HOH A . E 5 HOH 116 716 116 HOH HOH A . E 5 HOH 117 717 117 HOH HOH A . E 5 HOH 118 718 118 HOH HOH A . E 5 HOH 119 719 119 HOH HOH A . E 5 HOH 120 720 120 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 50 ? A CYS 300 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 53 ? A CYS 303 ? 1_555 108.4 ? 2 SG ? A CYS 50 ? A CYS 300 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 70 ? A HIS 320 ? 1_555 99.5 ? 3 SG ? A CYS 53 ? A CYS 303 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 70 ? A HIS 320 ? 1_555 116.5 ? 4 SG ? A CYS 50 ? A CYS 300 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 77 ? A CYS 327 ? 1_555 114.8 ? 5 SG ? A CYS 53 ? A CYS 303 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 77 ? A CYS 327 ? 1_555 111.0 ? 6 NE2 ? A HIS 70 ? A HIS 320 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 77 ? A CYS 327 ? 1_555 106.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-14 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.value' 14 2 'Structure model' '_struct_conn.pdbx_dist_value' 15 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 2 'Structure model' '_struct_ref_seq_dif.details' 21 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _software.name PHENIX _software.classification refinement _software.version '(phenix.refine: 1.5_2)' _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 295 ? ? 43.74 -126.05 2 1 ALA A 352 ? ? 159.62 -45.95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 436 C0 C N N 1 436 N1 N N N 2 436 CA1 C N S 3 436 C1 C N N 4 436 N2 N N N 5 436 CA2 C N S 6 436 C2 C N N 7 436 N3 N N N 8 436 O1 O N N 9 436 O2 O N N 10 436 CD3 C N N 11 436 CG3 C N S 12 436 CB3 C N N 13 436 CA3 C N R 14 436 CB4 C N N 15 436 CG4 C Y N 16 436 CD2 C Y N 17 436 CE2 C Y N 18 436 NE1 N Y N 19 436 CD1 C Y N 20 436 CZ2 C Y N 21 436 CH2 C Y N 22 436 CZ3 C Y N 23 436 CE3 C Y N 24 436 F F N N 25 436 CB1 C N N 26 436 CB2 C N N 27 436 CG2 C N N 28 436 OG3 O N N 29 436 C5 C N N 30 436 N6 N N N 31 436 CA6 C N S 32 436 C6 C N N 33 436 N7 N N N 34 436 CA7 C N R 35 436 C7 C N N 36 436 N8 N N N 37 436 O6 O N N 38 436 O7 O N N 39 436 CD8 C N N 40 436 CG8 C N S 41 436 CB8 C N N 42 436 CA8 C N R 43 436 CB9 C N N 44 436 CG9 C Y N 45 436 CD7 C Y N 46 436 CE7 C Y N 47 436 NE6 N Y N 48 436 CD6 C Y N 49 436 CZ7 C Y N 50 436 CH7 C Y N 51 436 CZ8 C Y N 52 436 CE8 C Y N 53 436 F5 F N N 54 436 CB6 C N N 55 436 CB7 C N N 56 436 CG7 C N N 57 436 OG8 O N N 58 436 H1 H N N 59 436 H2 H N N 60 436 H3 H N N 61 436 H4 H N N 62 436 H6 H N N 63 436 H7 H N N 64 436 H8 H N N 65 436 H9 H N N 66 436 H10 H N N 67 436 H11 H N N 68 436 H12 H N N 69 436 H13 H N N 70 436 H14 H N N 71 436 H15 H N N 72 436 H16 H N N 73 436 H17 H N N 74 436 H18 H N N 75 436 H19 H N N 76 436 H20 H N N 77 436 H21 H N N 78 436 H22 H N N 79 436 H23 H N N 80 436 H24 H N N 81 436 H25 H N N 82 436 H26 H N N 83 436 H27 H N N 84 436 H28 H N N 85 436 H29 H N N 86 436 H30 H N N 87 436 H31 H N N 88 436 H32 H N N 89 436 H33 H N N 90 436 H35 H N N 91 436 H36 H N N 92 436 H37 H N N 93 436 H38 H N N 94 436 H39 H N N 95 436 H40 H N N 96 436 H41 H N N 97 436 H42 H N N 98 436 H43 H N N 99 436 H44 H N N 100 436 H45 H N N 101 436 H46 H N N 102 436 H47 H N N 103 436 H48 H N N 104 436 H49 H N N 105 436 H50 H N N 106 436 H51 H N N 107 436 H52 H N N 108 436 H53 H N N 109 436 H54 H N N 110 436 H55 H N N 111 436 H56 H N N 112 436 H57 H N N 113 436 H58 H N N 114 ALA N N N N 115 ALA CA C N S 116 ALA C C N N 117 ALA O O N N 118 ALA CB C N N 119 ALA OXT O N N 120 ALA H H N N 121 ALA H2 H N N 122 ALA HA H N N 123 ALA HB1 H N N 124 ALA HB2 H N N 125 ALA HB3 H N N 126 ALA HXT H N N 127 ARG N N N N 128 ARG CA C N S 129 ARG C C N N 130 ARG O O N N 131 ARG CB C N N 132 ARG CG C N N 133 ARG CD C N N 134 ARG NE N N N 135 ARG CZ C N N 136 ARG NH1 N N N 137 ARG NH2 N N N 138 ARG OXT O N N 139 ARG H H N N 140 ARG H2 H N N 141 ARG HA H N N 142 ARG HB2 H N N 143 ARG HB3 H N N 144 ARG HG2 H N N 145 ARG HG3 H N N 146 ARG HD2 H N N 147 ARG HD3 H N N 148 ARG HE H N N 149 ARG HH11 H N N 150 ARG HH12 H N N 151 ARG HH21 H N N 152 ARG HH22 H N N 153 ARG HXT H N N 154 ASN N N N N 155 ASN CA C N S 156 ASN C C N N 157 ASN O O N N 158 ASN CB C N N 159 ASN CG C N N 160 ASN OD1 O N N 161 ASN ND2 N N N 162 ASN OXT O N N 163 ASN H H N N 164 ASN H2 H N N 165 ASN HA H N N 166 ASN HB2 H N N 167 ASN HB3 H N N 168 ASN HD21 H N N 169 ASN HD22 H N N 170 ASN HXT H N N 171 ASP N N N N 172 ASP CA C N S 173 ASP C C N N 174 ASP O O N N 175 ASP CB C N N 176 ASP CG C N N 177 ASP OD1 O N N 178 ASP OD2 O N N 179 ASP OXT O N N 180 ASP H H N N 181 ASP H2 H N N 182 ASP HA H N N 183 ASP HB2 H N N 184 ASP HB3 H N N 185 ASP HD2 H N N 186 ASP HXT H N N 187 CYS N N N N 188 CYS CA C N R 189 CYS C C N N 190 CYS O O N N 191 CYS CB C N N 192 CYS SG S N N 193 CYS OXT O N N 194 CYS H H N N 195 CYS H2 H N N 196 CYS HA H N N 197 CYS HB2 H N N 198 CYS HB3 H N N 199 CYS HG H N N 200 CYS HXT H N N 201 GLN N N N N 202 GLN CA C N S 203 GLN C C N N 204 GLN O O N N 205 GLN CB C N N 206 GLN CG C N N 207 GLN CD C N N 208 GLN OE1 O N N 209 GLN NE2 N N N 210 GLN OXT O N N 211 GLN H H N N 212 GLN H2 H N N 213 GLN HA H N N 214 GLN HB2 H N N 215 GLN HB3 H N N 216 GLN HG2 H N N 217 GLN HG3 H N N 218 GLN HE21 H N N 219 GLN HE22 H N N 220 GLN HXT H N N 221 GLU N N N N 222 GLU CA C N S 223 GLU C C N N 224 GLU O O N N 225 GLU CB C N N 226 GLU CG C N N 227 GLU CD C N N 228 GLU OE1 O N N 229 GLU OE2 O N N 230 GLU OXT O N N 231 GLU H H N N 232 GLU H2 H N N 233 GLU HA H N N 234 GLU HB2 H N N 235 GLU HB3 H N N 236 GLU HG2 H N N 237 GLU HG3 H N N 238 GLU HE2 H N N 239 GLU HXT H N N 240 GLY N N N N 241 GLY CA C N N 242 GLY C C N N 243 GLY O O N N 244 GLY OXT O N N 245 GLY H H N N 246 GLY H2 H N N 247 GLY HA2 H N N 248 GLY HA3 H N N 249 GLY HXT H N N 250 HIS N N N N 251 HIS CA C N S 252 HIS C C N N 253 HIS O O N N 254 HIS CB C N N 255 HIS CG C Y N 256 HIS ND1 N Y N 257 HIS CD2 C Y N 258 HIS CE1 C Y N 259 HIS NE2 N Y N 260 HIS OXT O N N 261 HIS H H N N 262 HIS H2 H N N 263 HIS HA H N N 264 HIS HB2 H N N 265 HIS HB3 H N N 266 HIS HD1 H N N 267 HIS HD2 H N N 268 HIS HE1 H N N 269 HIS HE2 H N N 270 HIS HXT H N N 271 HOH O O N N 272 HOH H1 H N N 273 HOH H2 H N N 274 ILE N N N N 275 ILE CA C N S 276 ILE C C N N 277 ILE O O N N 278 ILE CB C N S 279 ILE CG1 C N N 280 ILE CG2 C N N 281 ILE CD1 C N N 282 ILE OXT O N N 283 ILE H H N N 284 ILE H2 H N N 285 ILE HA H N N 286 ILE HB H N N 287 ILE HG12 H N N 288 ILE HG13 H N N 289 ILE HG21 H N N 290 ILE HG22 H N N 291 ILE HG23 H N N 292 ILE HD11 H N N 293 ILE HD12 H N N 294 ILE HD13 H N N 295 ILE HXT H N N 296 LEU N N N N 297 LEU CA C N S 298 LEU C C N N 299 LEU O O N N 300 LEU CB C N N 301 LEU CG C N N 302 LEU CD1 C N N 303 LEU CD2 C N N 304 LEU OXT O N N 305 LEU H H N N 306 LEU H2 H N N 307 LEU HA H N N 308 LEU HB2 H N N 309 LEU HB3 H N N 310 LEU HG H N N 311 LEU HD11 H N N 312 LEU HD12 H N N 313 LEU HD13 H N N 314 LEU HD21 H N N 315 LEU HD22 H N N 316 LEU HD23 H N N 317 LEU HXT H N N 318 LYS N N N N 319 LYS CA C N S 320 LYS C C N N 321 LYS O O N N 322 LYS CB C N N 323 LYS CG C N N 324 LYS CD C N N 325 LYS CE C N N 326 LYS NZ N N N 327 LYS OXT O N N 328 LYS H H N N 329 LYS H2 H N N 330 LYS HA H N N 331 LYS HB2 H N N 332 LYS HB3 H N N 333 LYS HG2 H N N 334 LYS HG3 H N N 335 LYS HD2 H N N 336 LYS HD3 H N N 337 LYS HE2 H N N 338 LYS HE3 H N N 339 LYS HZ1 H N N 340 LYS HZ2 H N N 341 LYS HZ3 H N N 342 LYS HXT H N N 343 MET N N N N 344 MET CA C N S 345 MET C C N N 346 MET O O N N 347 MET CB C N N 348 MET CG C N N 349 MET SD S N N 350 MET CE C N N 351 MET OXT O N N 352 MET H H N N 353 MET H2 H N N 354 MET HA H N N 355 MET HB2 H N N 356 MET HB3 H N N 357 MET HG2 H N N 358 MET HG3 H N N 359 MET HE1 H N N 360 MET HE2 H N N 361 MET HE3 H N N 362 MET HXT H N N 363 PHE N N N N 364 PHE CA C N S 365 PHE C C N N 366 PHE O O N N 367 PHE CB C N N 368 PHE CG C Y N 369 PHE CD1 C Y N 370 PHE CD2 C Y N 371 PHE CE1 C Y N 372 PHE CE2 C Y N 373 PHE CZ C Y N 374 PHE OXT O N N 375 PHE H H N N 376 PHE H2 H N N 377 PHE HA H N N 378 PHE HB2 H N N 379 PHE HB3 H N N 380 PHE HD1 H N N 381 PHE HD2 H N N 382 PHE HE1 H N N 383 PHE HE2 H N N 384 PHE HZ H N N 385 PHE HXT H N N 386 PO4 P P N N 387 PO4 O1 O N N 388 PO4 O2 O N N 389 PO4 O3 O N N 390 PO4 O4 O N N 391 PRO N N N N 392 PRO CA C N S 393 PRO C C N N 394 PRO O O N N 395 PRO CB C N N 396 PRO CG C N N 397 PRO CD C N N 398 PRO OXT O N N 399 PRO H H N N 400 PRO HA H N N 401 PRO HB2 H N N 402 PRO HB3 H N N 403 PRO HG2 H N N 404 PRO HG3 H N N 405 PRO HD2 H N N 406 PRO HD3 H N N 407 PRO HXT H N N 408 SER N N N N 409 SER CA C N S 410 SER C C N N 411 SER O O N N 412 SER CB C N N 413 SER OG O N N 414 SER OXT O N N 415 SER H H N N 416 SER H2 H N N 417 SER HA H N N 418 SER HB2 H N N 419 SER HB3 H N N 420 SER HG H N N 421 SER HXT H N N 422 THR N N N N 423 THR CA C N S 424 THR C C N N 425 THR O O N N 426 THR CB C N R 427 THR OG1 O N N 428 THR CG2 C N N 429 THR OXT O N N 430 THR H H N N 431 THR H2 H N N 432 THR HA H N N 433 THR HB H N N 434 THR HG1 H N N 435 THR HG21 H N N 436 THR HG22 H N N 437 THR HG23 H N N 438 THR HXT H N N 439 TRP N N N N 440 TRP CA C N S 441 TRP C C N N 442 TRP O O N N 443 TRP CB C N N 444 TRP CG C Y N 445 TRP CD1 C Y N 446 TRP CD2 C Y N 447 TRP NE1 N Y N 448 TRP CE2 C Y N 449 TRP CE3 C Y N 450 TRP CZ2 C Y N 451 TRP CZ3 C Y N 452 TRP CH2 C Y N 453 TRP OXT O N N 454 TRP H H N N 455 TRP H2 H N N 456 TRP HA H N N 457 TRP HB2 H N N 458 TRP HB3 H N N 459 TRP HD1 H N N 460 TRP HE1 H N N 461 TRP HE3 H N N 462 TRP HZ2 H N N 463 TRP HZ3 H N N 464 TRP HH2 H N N 465 TRP HXT H N N 466 TYR N N N N 467 TYR CA C N S 468 TYR C C N N 469 TYR O O N N 470 TYR CB C N N 471 TYR CG C Y N 472 TYR CD1 C Y N 473 TYR CD2 C Y N 474 TYR CE1 C Y N 475 TYR CE2 C Y N 476 TYR CZ C Y N 477 TYR OH O N N 478 TYR OXT O N N 479 TYR H H N N 480 TYR H2 H N N 481 TYR HA H N N 482 TYR HB2 H N N 483 TYR HB3 H N N 484 TYR HD1 H N N 485 TYR HD2 H N N 486 TYR HE1 H N N 487 TYR HE2 H N N 488 TYR HH H N N 489 TYR HXT H N N 490 VAL N N N N 491 VAL CA C N S 492 VAL C C N N 493 VAL O O N N 494 VAL CB C N N 495 VAL CG1 C N N 496 VAL CG2 C N N 497 VAL OXT O N N 498 VAL H H N N 499 VAL H2 H N N 500 VAL HA H N N 501 VAL HB H N N 502 VAL HG11 H N N 503 VAL HG12 H N N 504 VAL HG13 H N N 505 VAL HG21 H N N 506 VAL HG22 H N N 507 VAL HG23 H N N 508 VAL HXT H N N 509 ZN ZN ZN N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 436 N1 C0 sing N N 1 436 N1 CA1 sing N N 2 436 O1 C1 doub N N 3 436 CB1 CA1 sing N N 4 436 CA1 C1 sing N N 5 436 C1 N2 sing N N 6 436 CD3 CG3 sing N N 7 436 CD3 N3 sing N N 8 436 N2 CA2 sing N N 9 436 CG3 CB3 sing N N 10 436 CG3 OG3 sing N N 11 436 CA2 C2 sing N N 12 436 CA2 CB2 sing N N 13 436 CB3 CA3 sing N N 14 436 N3 C2 sing N N 15 436 N3 CA3 sing N N 16 436 C2 O2 doub N N 17 436 CB2 CG2 sing N N 18 436 CA3 CB4 sing N N 19 436 F5 CH7 sing N N 20 436 CZ7 CH7 doub Y N 21 436 CZ7 CE7 sing Y N 22 436 CB4 CG4 sing N N 23 436 NE6 CE7 sing Y N 24 436 NE6 CD6 sing Y N 25 436 CH7 CZ8 sing Y N 26 436 CE7 CD7 doub Y N 27 436 CE3 CD2 doub Y N 28 436 CE3 CZ3 sing Y N 29 436 CG4 CD2 sing Y N 30 436 CG4 CD1 doub Y N 31 436 CD2 CE2 sing Y N 32 436 CZ3 CH2 doub Y N 33 436 CD1 CD6 sing N N 34 436 CD1 NE1 sing Y N 35 436 CD6 CG9 doub Y N 36 436 CE2 NE1 sing Y N 37 436 CE2 CZ2 doub Y N 38 436 CH2 CZ2 sing Y N 39 436 CH2 F sing N N 40 436 CZ8 CE8 doub Y N 41 436 CD7 CG9 sing Y N 42 436 CD7 CE8 sing Y N 43 436 CG9 CB9 sing N N 44 436 CB9 CA8 sing N N 45 436 CA8 CB8 sing N N 46 436 CA8 N8 sing N N 47 436 CB8 CG8 sing N N 48 436 C5 N6 sing N N 49 436 O7 C7 doub N N 50 436 N8 C7 sing N N 51 436 N8 CD8 sing N N 52 436 OG8 CG8 sing N N 53 436 C7 CA7 sing N N 54 436 CG8 CD8 sing N N 55 436 N6 CA6 sing N N 56 436 O6 C6 doub N N 57 436 CA7 N7 sing N N 58 436 CA7 CB7 sing N N 59 436 CA6 C6 sing N N 60 436 CA6 CB6 sing N N 61 436 C6 N7 sing N N 62 436 CB7 CG7 sing N N 63 436 C0 H1 sing N N 64 436 C0 H2 sing N N 65 436 C0 H3 sing N N 66 436 N1 H4 sing N N 67 436 CA1 H6 sing N N 68 436 N2 H7 sing N N 69 436 CA2 H8 sing N N 70 436 CD3 H9 sing N N 71 436 CD3 H10 sing N N 72 436 CG3 H11 sing N N 73 436 CB3 H12 sing N N 74 436 CB3 H13 sing N N 75 436 CA3 H14 sing N N 76 436 CB4 H15 sing N N 77 436 CB4 H16 sing N N 78 436 NE1 H17 sing N N 79 436 CZ2 H18 sing N N 80 436 CZ3 H19 sing N N 81 436 CE3 H20 sing N N 82 436 CB1 H21 sing N N 83 436 CB1 H22 sing N N 84 436 CB1 H23 sing N N 85 436 CB2 H24 sing N N 86 436 CB2 H25 sing N N 87 436 CG2 H26 sing N N 88 436 CG2 H27 sing N N 89 436 CG2 H28 sing N N 90 436 OG3 H29 sing N N 91 436 C5 H30 sing N N 92 436 C5 H31 sing N N 93 436 C5 H32 sing N N 94 436 N6 H33 sing N N 95 436 CA6 H35 sing N N 96 436 N7 H36 sing N N 97 436 CA7 H37 sing N N 98 436 CD8 H38 sing N N 99 436 CD8 H39 sing N N 100 436 CG8 H40 sing N N 101 436 CB8 H41 sing N N 102 436 CB8 H42 sing N N 103 436 CA8 H43 sing N N 104 436 CB9 H44 sing N N 105 436 CB9 H45 sing N N 106 436 NE6 H46 sing N N 107 436 CZ7 H47 sing N N 108 436 CZ8 H48 sing N N 109 436 CE8 H49 sing N N 110 436 CB6 H50 sing N N 111 436 CB6 H51 sing N N 112 436 CB6 H52 sing N N 113 436 CB7 H53 sing N N 114 436 CB7 H54 sing N N 115 436 CG7 H55 sing N N 116 436 CG7 H56 sing N N 117 436 CG7 H57 sing N N 118 436 OG8 H58 sing N N 119 ALA N CA sing N N 120 ALA N H sing N N 121 ALA N H2 sing N N 122 ALA CA C sing N N 123 ALA CA CB sing N N 124 ALA CA HA sing N N 125 ALA C O doub N N 126 ALA C OXT sing N N 127 ALA CB HB1 sing N N 128 ALA CB HB2 sing N N 129 ALA CB HB3 sing N N 130 ALA OXT HXT sing N N 131 ARG N CA sing N N 132 ARG N H sing N N 133 ARG N H2 sing N N 134 ARG CA C sing N N 135 ARG CA CB sing N N 136 ARG CA HA sing N N 137 ARG C O doub N N 138 ARG C OXT sing N N 139 ARG CB CG sing N N 140 ARG CB HB2 sing N N 141 ARG CB HB3 sing N N 142 ARG CG CD sing N N 143 ARG CG HG2 sing N N 144 ARG CG HG3 sing N N 145 ARG CD NE sing N N 146 ARG CD HD2 sing N N 147 ARG CD HD3 sing N N 148 ARG NE CZ sing N N 149 ARG NE HE sing N N 150 ARG CZ NH1 sing N N 151 ARG CZ NH2 doub N N 152 ARG NH1 HH11 sing N N 153 ARG NH1 HH12 sing N N 154 ARG NH2 HH21 sing N N 155 ARG NH2 HH22 sing N N 156 ARG OXT HXT sing N N 157 ASN N CA sing N N 158 ASN N H sing N N 159 ASN N H2 sing N N 160 ASN CA C sing N N 161 ASN CA CB sing N N 162 ASN CA HA sing N N 163 ASN C O doub N N 164 ASN C OXT sing N N 165 ASN CB CG sing N N 166 ASN CB HB2 sing N N 167 ASN CB HB3 sing N N 168 ASN CG OD1 doub N N 169 ASN CG ND2 sing N N 170 ASN ND2 HD21 sing N N 171 ASN ND2 HD22 sing N N 172 ASN OXT HXT sing N N 173 ASP N CA sing N N 174 ASP N H sing N N 175 ASP N H2 sing N N 176 ASP CA C sing N N 177 ASP CA CB sing N N 178 ASP CA HA sing N N 179 ASP C O doub N N 180 ASP C OXT sing N N 181 ASP CB CG sing N N 182 ASP CB HB2 sing N N 183 ASP CB HB3 sing N N 184 ASP CG OD1 doub N N 185 ASP CG OD2 sing N N 186 ASP OD2 HD2 sing N N 187 ASP OXT HXT sing N N 188 CYS N CA sing N N 189 CYS N H sing N N 190 CYS N H2 sing N N 191 CYS CA C sing N N 192 CYS CA CB sing N N 193 CYS CA HA sing N N 194 CYS C O doub N N 195 CYS C OXT sing N N 196 CYS CB SG sing N N 197 CYS CB HB2 sing N N 198 CYS CB HB3 sing N N 199 CYS SG HG sing N N 200 CYS OXT HXT sing N N 201 GLN N CA sing N N 202 GLN N H sing N N 203 GLN N H2 sing N N 204 GLN CA C sing N N 205 GLN CA CB sing N N 206 GLN CA HA sing N N 207 GLN C O doub N N 208 GLN C OXT sing N N 209 GLN CB CG sing N N 210 GLN CB HB2 sing N N 211 GLN CB HB3 sing N N 212 GLN CG CD sing N N 213 GLN CG HG2 sing N N 214 GLN CG HG3 sing N N 215 GLN CD OE1 doub N N 216 GLN CD NE2 sing N N 217 GLN NE2 HE21 sing N N 218 GLN NE2 HE22 sing N N 219 GLN OXT HXT sing N N 220 GLU N CA sing N N 221 GLU N H sing N N 222 GLU N H2 sing N N 223 GLU CA C sing N N 224 GLU CA CB sing N N 225 GLU CA HA sing N N 226 GLU C O doub N N 227 GLU C OXT sing N N 228 GLU CB CG sing N N 229 GLU CB HB2 sing N N 230 GLU CB HB3 sing N N 231 GLU CG CD sing N N 232 GLU CG HG2 sing N N 233 GLU CG HG3 sing N N 234 GLU CD OE1 doub N N 235 GLU CD OE2 sing N N 236 GLU OE2 HE2 sing N N 237 GLU OXT HXT sing N N 238 GLY N CA sing N N 239 GLY N H sing N N 240 GLY N H2 sing N N 241 GLY CA C sing N N 242 GLY CA HA2 sing N N 243 GLY CA HA3 sing N N 244 GLY C O doub N N 245 GLY C OXT sing N N 246 GLY OXT HXT sing N N 247 HIS N CA sing N N 248 HIS N H sing N N 249 HIS N H2 sing N N 250 HIS CA C sing N N 251 HIS CA CB sing N N 252 HIS CA HA sing N N 253 HIS C O doub N N 254 HIS C OXT sing N N 255 HIS CB CG sing N N 256 HIS CB HB2 sing N N 257 HIS CB HB3 sing N N 258 HIS CG ND1 sing Y N 259 HIS CG CD2 doub Y N 260 HIS ND1 CE1 doub Y N 261 HIS ND1 HD1 sing N N 262 HIS CD2 NE2 sing Y N 263 HIS CD2 HD2 sing N N 264 HIS CE1 NE2 sing Y N 265 HIS CE1 HE1 sing N N 266 HIS NE2 HE2 sing N N 267 HIS OXT HXT sing N N 268 HOH O H1 sing N N 269 HOH O H2 sing N N 270 ILE N CA sing N N 271 ILE N H sing N N 272 ILE N H2 sing N N 273 ILE CA C sing N N 274 ILE CA CB sing N N 275 ILE CA HA sing N N 276 ILE C O doub N N 277 ILE C OXT sing N N 278 ILE CB CG1 sing N N 279 ILE CB CG2 sing N N 280 ILE CB HB sing N N 281 ILE CG1 CD1 sing N N 282 ILE CG1 HG12 sing N N 283 ILE CG1 HG13 sing N N 284 ILE CG2 HG21 sing N N 285 ILE CG2 HG22 sing N N 286 ILE CG2 HG23 sing N N 287 ILE CD1 HD11 sing N N 288 ILE CD1 HD12 sing N N 289 ILE CD1 HD13 sing N N 290 ILE OXT HXT sing N N 291 LEU N CA sing N N 292 LEU N H sing N N 293 LEU N H2 sing N N 294 LEU CA C sing N N 295 LEU CA CB sing N N 296 LEU CA HA sing N N 297 LEU C O doub N N 298 LEU C OXT sing N N 299 LEU CB CG sing N N 300 LEU CB HB2 sing N N 301 LEU CB HB3 sing N N 302 LEU CG CD1 sing N N 303 LEU CG CD2 sing N N 304 LEU CG HG sing N N 305 LEU CD1 HD11 sing N N 306 LEU CD1 HD12 sing N N 307 LEU CD1 HD13 sing N N 308 LEU CD2 HD21 sing N N 309 LEU CD2 HD22 sing N N 310 LEU CD2 HD23 sing N N 311 LEU OXT HXT sing N N 312 LYS N CA sing N N 313 LYS N H sing N N 314 LYS N H2 sing N N 315 LYS CA C sing N N 316 LYS CA CB sing N N 317 LYS CA HA sing N N 318 LYS C O doub N N 319 LYS C OXT sing N N 320 LYS CB CG sing N N 321 LYS CB HB2 sing N N 322 LYS CB HB3 sing N N 323 LYS CG CD sing N N 324 LYS CG HG2 sing N N 325 LYS CG HG3 sing N N 326 LYS CD CE sing N N 327 LYS CD HD2 sing N N 328 LYS CD HD3 sing N N 329 LYS CE NZ sing N N 330 LYS CE HE2 sing N N 331 LYS CE HE3 sing N N 332 LYS NZ HZ1 sing N N 333 LYS NZ HZ2 sing N N 334 LYS NZ HZ3 sing N N 335 LYS OXT HXT sing N N 336 MET N CA sing N N 337 MET N H sing N N 338 MET N H2 sing N N 339 MET CA C sing N N 340 MET CA CB sing N N 341 MET CA HA sing N N 342 MET C O doub N N 343 MET C OXT sing N N 344 MET CB CG sing N N 345 MET CB HB2 sing N N 346 MET CB HB3 sing N N 347 MET CG SD sing N N 348 MET CG HG2 sing N N 349 MET CG HG3 sing N N 350 MET SD CE sing N N 351 MET CE HE1 sing N N 352 MET CE HE2 sing N N 353 MET CE HE3 sing N N 354 MET OXT HXT sing N N 355 PHE N CA sing N N 356 PHE N H sing N N 357 PHE N H2 sing N N 358 PHE CA C sing N N 359 PHE CA CB sing N N 360 PHE CA HA sing N N 361 PHE C O doub N N 362 PHE C OXT sing N N 363 PHE CB CG sing N N 364 PHE CB HB2 sing N N 365 PHE CB HB3 sing N N 366 PHE CG CD1 doub Y N 367 PHE CG CD2 sing Y N 368 PHE CD1 CE1 sing Y N 369 PHE CD1 HD1 sing N N 370 PHE CD2 CE2 doub Y N 371 PHE CD2 HD2 sing N N 372 PHE CE1 CZ doub Y N 373 PHE CE1 HE1 sing N N 374 PHE CE2 CZ sing Y N 375 PHE CE2 HE2 sing N N 376 PHE CZ HZ sing N N 377 PHE OXT HXT sing N N 378 PO4 P O1 doub N N 379 PO4 P O2 sing N N 380 PO4 P O3 sing N N 381 PO4 P O4 sing N N 382 PRO N CA sing N N 383 PRO N CD sing N N 384 PRO N H sing N N 385 PRO CA C sing N N 386 PRO CA CB sing N N 387 PRO CA HA sing N N 388 PRO C O doub N N 389 PRO C OXT sing N N 390 PRO CB CG sing N N 391 PRO CB HB2 sing N N 392 PRO CB HB3 sing N N 393 PRO CG CD sing N N 394 PRO CG HG2 sing N N 395 PRO CG HG3 sing N N 396 PRO CD HD2 sing N N 397 PRO CD HD3 sing N N 398 PRO OXT HXT sing N N 399 SER N CA sing N N 400 SER N H sing N N 401 SER N H2 sing N N 402 SER CA C sing N N 403 SER CA CB sing N N 404 SER CA HA sing N N 405 SER C O doub N N 406 SER C OXT sing N N 407 SER CB OG sing N N 408 SER CB HB2 sing N N 409 SER CB HB3 sing N N 410 SER OG HG sing N N 411 SER OXT HXT sing N N 412 THR N CA sing N N 413 THR N H sing N N 414 THR N H2 sing N N 415 THR CA C sing N N 416 THR CA CB sing N N 417 THR CA HA sing N N 418 THR C O doub N N 419 THR C OXT sing N N 420 THR CB OG1 sing N N 421 THR CB CG2 sing N N 422 THR CB HB sing N N 423 THR OG1 HG1 sing N N 424 THR CG2 HG21 sing N N 425 THR CG2 HG22 sing N N 426 THR CG2 HG23 sing N N 427 THR OXT HXT sing N N 428 TRP N CA sing N N 429 TRP N H sing N N 430 TRP N H2 sing N N 431 TRP CA C sing N N 432 TRP CA CB sing N N 433 TRP CA HA sing N N 434 TRP C O doub N N 435 TRP C OXT sing N N 436 TRP CB CG sing N N 437 TRP CB HB2 sing N N 438 TRP CB HB3 sing N N 439 TRP CG CD1 doub Y N 440 TRP CG CD2 sing Y N 441 TRP CD1 NE1 sing Y N 442 TRP CD1 HD1 sing N N 443 TRP CD2 CE2 doub Y N 444 TRP CD2 CE3 sing Y N 445 TRP NE1 CE2 sing Y N 446 TRP NE1 HE1 sing N N 447 TRP CE2 CZ2 sing Y N 448 TRP CE3 CZ3 doub Y N 449 TRP CE3 HE3 sing N N 450 TRP CZ2 CH2 doub Y N 451 TRP CZ2 HZ2 sing N N 452 TRP CZ3 CH2 sing Y N 453 TRP CZ3 HZ3 sing N N 454 TRP CH2 HH2 sing N N 455 TRP OXT HXT sing N N 456 TYR N CA sing N N 457 TYR N H sing N N 458 TYR N H2 sing N N 459 TYR CA C sing N N 460 TYR CA CB sing N N 461 TYR CA HA sing N N 462 TYR C O doub N N 463 TYR C OXT sing N N 464 TYR CB CG sing N N 465 TYR CB HB2 sing N N 466 TYR CB HB3 sing N N 467 TYR CG CD1 doub Y N 468 TYR CG CD2 sing Y N 469 TYR CD1 CE1 sing Y N 470 TYR CD1 HD1 sing N N 471 TYR CD2 CE2 doub Y N 472 TYR CD2 HD2 sing N N 473 TYR CE1 CZ doub Y N 474 TYR CE1 HE1 sing N N 475 TYR CE2 CZ sing Y N 476 TYR CE2 HE2 sing N N 477 TYR CZ OH sing N N 478 TYR OH HH sing N N 479 TYR OXT HXT sing N N 480 VAL N CA sing N N 481 VAL N H sing N N 482 VAL N H2 sing N N 483 VAL CA C sing N N 484 VAL CA CB sing N N 485 VAL CA HA sing N N 486 VAL C O doub N N 487 VAL C OXT sing N N 488 VAL CB CG1 sing N N 489 VAL CB CG2 sing N N 490 VAL CB HB sing N N 491 VAL CG1 HG11 sing N N 492 VAL CG1 HG12 sing N N 493 VAL CG1 HG13 sing N N 494 VAL CG2 HG21 sing N N 495 VAL CG2 HG22 sing N N 496 VAL CG2 HG23 sing N N 497 VAL OXT HXT sing N N 498 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 ;(2S)-N-{(2R)-1-[(2R,4S)-2-{[6,6'-difluoro-3'-({(2R,4S)-4-hydroxy-1-[(2S)-2-{[(2S)-2-(methylamino)propanoyl]amino}butanoyl]pyrrolidin-2-yl}methyl)-1H,1'H-2,2'-biindol-3-yl]methyl}-4-hydroxypyrrolidin-1-yl]-1-oxobutan-2-yl}-2-(methylamino)propanamide ; 436 4 'PHOSPHATE ION' PO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1G73 _pdbx_initial_refinement_model.details ? #