data_4KOM # _entry.id 4KOM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4KOM RCSB RCSB079599 WWPDB D_1000079599 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4KOL . unspecified PDB 4KON . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4KOM _pdbx_database_status.recvd_initial_deposition_date 2013-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, Y.' 1 'Zhang, W.' 2 'Wang, F.' 3 'Qi, J.' 4 'Song, H.' 5 'Wu, Y.' 6 'Gao, F.' 7 'Zhang, Y.' 8 'Fan, Z.' 9 'Gong, W.' 10 'Wang, D.' 11 'Shu, Y.' 12 'Wang, Y.' 13 'Yan, J.' 14 'Gao, G.F.' 15 # _citation.id primary _citation.title 'Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses.' _citation.journal_abbrev Science _citation.journal_volume 342 _citation.page_first 243 _citation.page_last 247 _citation.year 2013 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24009358 _citation.pdbx_database_id_DOI 10.1126/science.1242917 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, Y.' 1 ? primary 'Zhang, W.' 2 ? primary 'Wang, F.' 3 ? primary 'Qi, J.' 4 ? primary 'Wu, Y.' 5 ? primary 'Song, H.' 6 ? primary 'Gao, F.' 7 ? primary 'Bi, Y.' 8 ? primary 'Zhang, Y.' 9 ? primary 'Fan, Z.' 10 ? primary 'Qin, C.' 11 ? primary 'Sun, H.' 12 ? primary 'Liu, J.' 13 ? primary 'Haywood, J.' 14 ? primary 'Liu, W.' 15 ? primary 'Gong, W.' 16 ? primary 'Wang, D.' 17 ? primary 'Shu, Y.' 18 ? primary 'Wang, Y.' 19 ? primary 'Yan, J.' 20 ? primary 'Gao, G.F.' 21 ? # _cell.entry_id 4KOM _cell.length_a 117.060 _cell.length_b 117.060 _cell.length_c 296.429 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4KOM _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hemagglutinin HA1' 34195.594 1 ? ? ? ? 2 polymer man 'Hemagglutinin HA2' 19490.309 1 ? ? ? ? 3 branched man ;N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose ; 836.744 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 5 water nat water 18.015 85 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERRE GSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNT RKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAF IAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPE ; ;ICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERRE GSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNT RKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAF IAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPE ; A ? 2 'polypeptide(L)' no no ;GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNV INWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHS KYREEAMQN ; ;GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNV INWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHS KYREEAMQN ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 CYS n 1 3 LEU n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 ALA n 1 8 VAL n 1 9 SER n 1 10 ASN n 1 11 GLY n 1 12 THR n 1 13 LYS n 1 14 VAL n 1 15 ASN n 1 16 THR n 1 17 LEU n 1 18 THR n 1 19 GLU n 1 20 ARG n 1 21 GLY n 1 22 VAL n 1 23 GLU n 1 24 VAL n 1 25 VAL n 1 26 ASN n 1 27 ALA n 1 28 THR n 1 29 GLU n 1 30 THR n 1 31 VAL n 1 32 GLU n 1 33 ARG n 1 34 THR n 1 35 ASN n 1 36 ILE n 1 37 PRO n 1 38 ARG n 1 39 ILE n 1 40 CYS n 1 41 SER n 1 42 LYS n 1 43 GLY n 1 44 LYS n 1 45 ARG n 1 46 THR n 1 47 VAL n 1 48 ASP n 1 49 LEU n 1 50 GLY n 1 51 GLN n 1 52 CYS n 1 53 GLY n 1 54 LEU n 1 55 LEU n 1 56 GLY n 1 57 THR n 1 58 ILE n 1 59 THR n 1 60 GLY n 1 61 PRO n 1 62 PRO n 1 63 GLN n 1 64 CYS n 1 65 ASP n 1 66 GLN n 1 67 PHE n 1 68 LEU n 1 69 GLU n 1 70 PHE n 1 71 SER n 1 72 ALA n 1 73 ASP n 1 74 LEU n 1 75 ILE n 1 76 ILE n 1 77 GLU n 1 78 ARG n 1 79 ARG n 1 80 GLU n 1 81 GLY n 1 82 SER n 1 83 ASP n 1 84 VAL n 1 85 CYS n 1 86 TYR n 1 87 PRO n 1 88 GLY n 1 89 LYS n 1 90 PHE n 1 91 VAL n 1 92 ASN n 1 93 GLU n 1 94 GLU n 1 95 ALA n 1 96 LEU n 1 97 ARG n 1 98 GLN n 1 99 ILE n 1 100 LEU n 1 101 ARG n 1 102 GLU n 1 103 SER n 1 104 GLY n 1 105 GLY n 1 106 ILE n 1 107 ASP n 1 108 LYS n 1 109 GLU n 1 110 ALA n 1 111 MET n 1 112 GLY n 1 113 PHE n 1 114 THR n 1 115 TYR n 1 116 SER n 1 117 GLY n 1 118 ILE n 1 119 ARG n 1 120 THR n 1 121 ASN n 1 122 GLY n 1 123 ALA n 1 124 THR n 1 125 SER n 1 126 ALA n 1 127 CYS n 1 128 ARG n 1 129 ARG n 1 130 SER n 1 131 GLY n 1 132 SER n 1 133 SER n 1 134 PHE n 1 135 TYR n 1 136 ALA n 1 137 GLU n 1 138 MET n 1 139 LYS n 1 140 TRP n 1 141 LEU n 1 142 LEU n 1 143 SER n 1 144 ASN n 1 145 THR n 1 146 ASP n 1 147 ASN n 1 148 ALA n 1 149 ALA n 1 150 PHE n 1 151 PRO n 1 152 GLN n 1 153 MET n 1 154 THR n 1 155 LYS n 1 156 SER n 1 157 TYR n 1 158 LYS n 1 159 ASN n 1 160 THR n 1 161 ARG n 1 162 LYS n 1 163 SER n 1 164 PRO n 1 165 ALA n 1 166 LEU n 1 167 ILE n 1 168 VAL n 1 169 TRP n 1 170 GLY n 1 171 ILE n 1 172 HIS n 1 173 HIS n 1 174 SER n 1 175 VAL n 1 176 SER n 1 177 THR n 1 178 ALA n 1 179 GLU n 1 180 GLN n 1 181 THR n 1 182 LYS n 1 183 LEU n 1 184 TYR n 1 185 GLY n 1 186 SER n 1 187 GLY n 1 188 ASN n 1 189 LYS n 1 190 LEU n 1 191 VAL n 1 192 THR n 1 193 VAL n 1 194 GLY n 1 195 SER n 1 196 SER n 1 197 ASN n 1 198 TYR n 1 199 GLN n 1 200 GLN n 1 201 SER n 1 202 PHE n 1 203 VAL n 1 204 PRO n 1 205 SER n 1 206 PRO n 1 207 GLY n 1 208 ALA n 1 209 ARG n 1 210 PRO n 1 211 GLN n 1 212 VAL n 1 213 ASN n 1 214 GLY n 1 215 LEU n 1 216 SER n 1 217 GLY n 1 218 ARG n 1 219 ILE n 1 220 ASP n 1 221 PHE n 1 222 HIS n 1 223 TRP n 1 224 LEU n 1 225 MET n 1 226 LEU n 1 227 ASN n 1 228 PRO n 1 229 ASN n 1 230 ASP n 1 231 THR n 1 232 VAL n 1 233 THR n 1 234 PHE n 1 235 SER n 1 236 PHE n 1 237 ASN n 1 238 GLY n 1 239 ALA n 1 240 PHE n 1 241 ILE n 1 242 ALA n 1 243 PRO n 1 244 ASP n 1 245 ARG n 1 246 ALA n 1 247 SER n 1 248 PHE n 1 249 LEU n 1 250 ARG n 1 251 GLY n 1 252 LYS n 1 253 SER n 1 254 MET n 1 255 GLY n 1 256 ILE n 1 257 GLN n 1 258 SER n 1 259 GLY n 1 260 VAL n 1 261 GLN n 1 262 VAL n 1 263 ASP n 1 264 ALA n 1 265 ASN n 1 266 CYS n 1 267 GLU n 1 268 GLY n 1 269 ASP n 1 270 CYS n 1 271 TYR n 1 272 HIS n 1 273 SER n 1 274 GLY n 1 275 GLY n 1 276 THR n 1 277 ILE n 1 278 ILE n 1 279 SER n 1 280 ASN n 1 281 LEU n 1 282 PRO n 1 283 PHE n 1 284 GLN n 1 285 ASN n 1 286 ILE n 1 287 ASP n 1 288 SER n 1 289 ARG n 1 290 ALA n 1 291 VAL n 1 292 GLY n 1 293 LYS n 1 294 CYS n 1 295 PRO n 1 296 ARG n 1 297 TYR n 1 298 VAL n 1 299 LYS n 1 300 GLN n 1 301 ARG n 1 302 SER n 1 303 LEU n 1 304 LEU n 1 305 LEU n 1 306 ALA n 1 307 THR n 1 308 GLY n 1 309 MET n 1 310 LYS n 1 311 ASN n 1 312 VAL n 1 313 PRO n 1 314 GLU n 2 1 GLY n 2 2 LEU n 2 3 PHE n 2 4 GLY n 2 5 ALA n 2 6 ILE n 2 7 ALA n 2 8 GLY n 2 9 PHE n 2 10 ILE n 2 11 GLU n 2 12 ASN n 2 13 GLY n 2 14 TRP n 2 15 GLU n 2 16 GLY n 2 17 LEU n 2 18 ILE n 2 19 ASP n 2 20 GLY n 2 21 TRP n 2 22 TYR n 2 23 GLY n 2 24 PHE n 2 25 ARG n 2 26 HIS n 2 27 GLN n 2 28 ASN n 2 29 ALA n 2 30 GLN n 2 31 GLY n 2 32 GLU n 2 33 GLY n 2 34 THR n 2 35 ALA n 2 36 ALA n 2 37 ASP n 2 38 TYR n 2 39 LYS n 2 40 SER n 2 41 THR n 2 42 GLN n 2 43 SER n 2 44 ALA n 2 45 ILE n 2 46 ASP n 2 47 GLN n 2 48 ILE n 2 49 THR n 2 50 GLY n 2 51 LYS n 2 52 LEU n 2 53 ASN n 2 54 ARG n 2 55 LEU n 2 56 ILE n 2 57 GLU n 2 58 LYS n 2 59 THR n 2 60 ASN n 2 61 GLN n 2 62 GLN n 2 63 PHE n 2 64 GLU n 2 65 LEU n 2 66 ILE n 2 67 ASP n 2 68 ASN n 2 69 GLU n 2 70 PHE n 2 71 ASN n 2 72 GLU n 2 73 VAL n 2 74 GLU n 2 75 LYS n 2 76 GLN n 2 77 ILE n 2 78 GLY n 2 79 ASN n 2 80 VAL n 2 81 ILE n 2 82 ASN n 2 83 TRP n 2 84 THR n 2 85 ARG n 2 86 ASP n 2 87 SER n 2 88 ILE n 2 89 THR n 2 90 GLU n 2 91 VAL n 2 92 TRP n 2 93 SER n 2 94 TYR n 2 95 ASN n 2 96 ALA n 2 97 GLU n 2 98 LEU n 2 99 LEU n 2 100 VAL n 2 101 ALA n 2 102 MET n 2 103 GLU n 2 104 ASN n 2 105 GLN n 2 106 HIS n 2 107 THR n 2 108 ILE n 2 109 ASP n 2 110 LEU n 2 111 ALA n 2 112 ASP n 2 113 SER n 2 114 GLU n 2 115 MET n 2 116 ASP n 2 117 LYS n 2 118 LEU n 2 119 TYR n 2 120 GLU n 2 121 ARG n 2 122 VAL n 2 123 LYS n 2 124 ARG n 2 125 GLN n 2 126 LEU n 2 127 ARG n 2 128 GLU n 2 129 ASN n 2 130 ALA n 2 131 GLU n 2 132 GLU n 2 133 ASP n 2 134 GLY n 2 135 THR n 2 136 GLY n 2 137 CYS n 2 138 PHE n 2 139 GLU n 2 140 ILE n 2 141 PHE n 2 142 HIS n 2 143 LYS n 2 144 CYS n 2 145 ASP n 2 146 ASP n 2 147 ASP n 2 148 CYS n 2 149 MET n 2 150 ALA n 2 151 SER n 2 152 ILE n 2 153 ARG n 2 154 ASN n 2 155 ASN n 2 156 THR n 2 157 TYR n 2 158 ASP n 2 159 HIS n 2 160 SER n 2 161 LYS n 2 162 TYR n 2 163 ARG n 2 164 GLU n 2 165 GLU n 2 166 ALA n 2 167 MET n 2 168 GLN n 2 169 ASN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? HA ? 'A/Anhui/1/2013 (H7N9)' ? ? ? ? 'Influenza A virus' 11320 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? pFastbac1 ? ? 2 1 sample ? ? ? ? ? HA ? 'A/Anhui/1/2013 (H7N9)' ? ? ? ? 'Influenza A virus' 11320 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? pFastbac1 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 4KOM 4KOM 1 ? ? ? 2 PDB 4KOM 4KOM 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4KOM A 1 ? 314 ? 4KOM 3 ? 316 ? 3 316 2 2 4KOM B 1 ? 169 ? 4KOM 322 ? 490 ? 322 490 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' ? 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4KOM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.64 _exptl_crystal.density_percent_sol 66.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '16% w/v PEG 3350, 0.2 M lithium sulfate, 0.1 M Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details ? _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-04-30 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.60 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI ? _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4KOM _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all ? _reflns.d_resolution_low 50.00 _reflns.pdbx_redundancy ? _reflns.number_obs 24232 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.10 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4KOM _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.42 _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] -8.4003 _refine.solvent_model_param_ksol 0.283 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 4.2001 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.2253 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.98 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1235 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.34 _refine.ls_percent_reflns_obs 99.53 _refine.ls_R_factor_R_work 0.2229 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.604 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.2253 _refine.aniso_B[2][2] 4.2001 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 39.075 _refine.pdbx_overall_phase_error 26.03 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] -0.0000 _refine.ls_R_factor_R_free 0.2720 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 24232 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 24232 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol 45.228 _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3739 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 99 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 3923 _refine_hist.d_res_high 2.604 _refine_hist.d_res_low 39.075 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.003 ? ? 3919 ? 'X-RAY DIFFRACTION' f_angle_d 0.917 ? ? 5294 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 19.154 ? ? 1458 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.118 ? ? 587 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 690 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.6039 2.7081 2504 0.3026 99.00 0.3409 . . 126 . . . . 'X-RAY DIFFRACTION' . 2.7081 2.8313 2539 0.2819 100.00 0.3606 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.8313 2.9806 2525 0.2667 100.00 0.2975 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.9806 3.1672 2547 0.2481 100.00 0.2935 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.1672 3.4116 2541 0.2544 100.00 0.2900 . . 126 . . . . 'X-RAY DIFFRACTION' . 3.4116 3.7547 2538 0.2308 100.00 0.2816 . . 148 . . . . 'X-RAY DIFFRACTION' . 3.7547 4.2974 2583 0.2000 100.00 0.2680 . . 124 . . . . 'X-RAY DIFFRACTION' . 4.2974 5.4120 2557 0.1789 99.00 0.2154 . . 133 . . . . 'X-RAY DIFFRACTION' . 5.4120 39.0793 2663 0.2185 99.00 0.2698 . . 152 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4KOM _struct.title ;The structure of hemagglutinin from avian-origin H7N9 influenza virus in complex with avian receptor analog 3'SLNLN (NeuAcα2-3Galβ1-4GlcNAcβ1-3Galβ1-4Glc) ; _struct.pdbx_descriptor Hemagglutinin _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KOM _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'homotrimer, virus attachment and membrane fusion, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 55 ? GLY A 60 ? LEU A 57 GLY A 62 1 ? 6 HELX_P HELX_P2 2 PRO A 61 ? LEU A 68 ? PRO A 63 LEU A 70 5 ? 8 HELX_P HELX_P3 3 ASN A 92 ? GLU A 102 ? ASN A 94 GLU A 104 1 ? 11 HELX_P HELX_P4 4 SER A 176 ? GLY A 185 ? SER A 178 GLY A 187 1 ? 10 HELX_P HELX_P5 5 ASP B 37 ? ILE B 56 ? ASP B 358 ILE B 377 1 ? 20 HELX_P HELX_P6 6 GLU B 74 ? LEU B 126 ? GLU B 395 LEU B 447 1 ? 53 HELX_P HELX_P7 7 ASP B 145 ? ASN B 154 ? ASP B 466 ASN B 475 1 ? 10 HELX_P HELX_P8 8 TYR B 162 ? ASN B 169 ? TYR B 483 ASN B 490 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 B CYS 137 SG ? ? A CYS 4 B CYS 458 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 266 SG ? ? A CYS 42 A CYS 268 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf3 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 54 A CYS 66 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf4 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 87 A CYS 129 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? A CYS 270 SG ? ? ? 1_555 A CYS 294 SG ? ? A CYS 272 A CYS 296 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf6 disulf ? ? B CYS 144 SG ? ? ? 1_555 B CYS 148 SG ? ? B CYS 465 B CYS 469 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? A ASN 26 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 28 A NAG 601 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale2 covale one ? A ASN 229 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 231 A NAG 602 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale3 covale one ? B ASN 82 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 403 B NAG 501 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale4 covale both ? C GAL . O3 ? ? ? 1_555 C NAG . C1 ? ? C GAL 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C GAL . C1 ? ? C NAG 2 C GAL 3 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale6 covale both ? C GAL . O3 ? ? ? 1_555 C SIA . C2 ? ? C GAL 3 C SIA 4 1_555 ? ? ? ? ? ? ? 1.432 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 2 ? D ? 3 ? E ? 2 ? F ? 3 ? G ? 5 ? H ? 2 ? I ? 2 ? J ? 4 ? K ? 3 ? L ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel E 1 2 ? parallel F 1 2 ? parallel F 2 3 ? parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel L 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 2 ? HIS A 5 ? CYS A 4 HIS A 7 A 2 TYR B 22 ? ASN B 28 ? TYR B 343 ASN B 349 A 3 GLY B 31 ? THR B 34 ? GLY B 352 THR B 355 B 1 THR A 12 ? ASN A 15 ? THR A 14 ASN A 17 B 2 ARG A 20 ? VAL A 24 ? ARG A 22 VAL A 26 C 1 ALA A 27 ? THR A 28 ? ALA A 29 THR A 30 C 2 LEU A 305 ? ALA A 306 ? LEU A 307 ALA A 308 D 1 VAL A 31 ? GLU A 32 ? VAL A 33 GLU A 34 D 2 PHE A 283 ? GLN A 284 ? PHE A 285 GLN A 286 D 3 ARG A 296 ? TYR A 297 ? ARG A 298 TYR A 299 E 1 ILE A 39 ? CYS A 40 ? ILE A 41 CYS A 42 E 2 VAL A 262 ? ASP A 263 ? VAL A 264 ASP A 265 F 1 THR A 46 ? ASP A 48 ? THR A 48 ASP A 50 F 2 LEU A 74 ? GLU A 77 ? LEU A 76 GLU A 79 F 3 MET A 254 ? GLN A 257 ? MET A 256 GLN A 259 G 1 GLY A 88 ? PHE A 90 ? GLY A 90 PHE A 92 G 2 ARG A 218 ? LEU A 226 ? ARG A 220 LEU A 228 G 3 ALA A 165 ? HIS A 173 ? ALA A 167 HIS A 175 G 4 PHE A 240 ? PRO A 243 ? PHE A 242 PRO A 245 G 5 MET A 138 ? TRP A 140 ? MET A 140 TRP A 142 H 1 ILE A 106 ? ALA A 110 ? ILE A 108 ALA A 112 H 2 ARG A 245 ? LEU A 249 ? ARG A 247 LEU A 251 I 1 THR A 124 ? ARG A 128 ? THR A 126 ARG A 130 I 2 SER A 132 ? SER A 133 ? SER A 134 SER A 135 J 1 MET A 153 ? LYS A 158 ? MET A 155 LYS A 160 J 2 THR A 231 ? PHE A 236 ? THR A 233 PHE A 238 J 3 VAL A 191 ? GLY A 194 ? VAL A 193 GLY A 196 J 4 GLN A 199 ? PHE A 202 ? GLN A 201 PHE A 204 K 1 GLY A 275 ? THR A 276 ? GLY A 277 THR A 278 K 2 CYS A 270 ? HIS A 272 ? CYS A 272 HIS A 274 K 3 VAL A 291 ? GLY A 292 ? VAL A 293 GLY A 294 L 1 ALA B 130 ? GLU B 132 ? ALA B 451 GLU B 453 L 2 PHE B 138 ? ILE B 140 ? PHE B 459 ILE B 461 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 2 ? N CYS A 4 O ARG B 25 ? O ARG B 346 A 2 3 N ASN B 28 ? N ASN B 349 O GLY B 31 ? O GLY B 352 B 1 2 N VAL A 14 ? N VAL A 16 O VAL A 22 ? O VAL A 24 C 1 2 N THR A 28 ? N THR A 30 O LEU A 305 ? O LEU A 307 D 1 2 N GLU A 32 ? N GLU A 34 O PHE A 283 ? O PHE A 285 D 2 3 N GLN A 284 ? N GLN A 286 O ARG A 296 ? O ARG A 298 E 1 2 N ILE A 39 ? N ILE A 41 O ASP A 263 ? O ASP A 265 F 1 2 N VAL A 47 ? N VAL A 49 O LEU A 74 ? O LEU A 76 F 2 3 N ILE A 75 ? N ILE A 77 O ILE A 256 ? O ILE A 258 G 1 2 N LYS A 89 ? N LYS A 91 O PHE A 221 ? O PHE A 223 G 2 3 O LEU A 226 ? O LEU A 228 N ALA A 165 ? N ALA A 167 G 3 4 N GLY A 170 ? N GLY A 172 O ILE A 241 ? O ILE A 243 G 4 5 O ALA A 242 ? O ALA A 244 N LYS A 139 ? N LYS A 141 H 1 2 N GLU A 109 ? N GLU A 111 O ALA A 246 ? O ALA A 248 I 1 2 N CYS A 127 ? N CYS A 129 O SER A 133 ? O SER A 135 J 1 2 N LYS A 155 ? N LYS A 157 O PHE A 234 ? O PHE A 236 J 2 3 O SER A 235 ? O SER A 237 N THR A 192 ? N THR A 194 J 3 4 N VAL A 191 ? N VAL A 193 O PHE A 202 ? O PHE A 204 K 1 2 O GLY A 275 ? O GLY A 277 N HIS A 272 ? N HIS A 274 K 2 3 N TYR A 271 ? N TYR A 273 O VAL A 291 ? O VAL A 293 L 1 2 N GLU B 131 ? N GLU B 452 O GLU B 139 ? O GLU B 460 # _database_PDB_matrix.entry_id 4KOM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4KOM _atom_sites.fract_transf_matrix[1][1] 0.008543 _atom_sites.fract_transf_matrix[1][2] 0.004932 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009864 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003373 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 3 3 ILE ILE A . n A 1 2 CYS 2 4 4 CYS CYS A . n A 1 3 LEU 3 5 5 LEU LEU A . n A 1 4 GLY 4 6 6 GLY GLY A . n A 1 5 HIS 5 7 7 HIS HIS A . n A 1 6 HIS 6 8 8 HIS HIS A . n A 1 7 ALA 7 9 9 ALA ALA A . n A 1 8 VAL 8 10 10 VAL VAL A . n A 1 9 SER 9 11 11 SER SER A . n A 1 10 ASN 10 12 12 ASN ASN A . n A 1 11 GLY 11 13 13 GLY GLY A . n A 1 12 THR 12 14 14 THR THR A . n A 1 13 LYS 13 15 15 LYS LYS A . n A 1 14 VAL 14 16 16 VAL VAL A . n A 1 15 ASN 15 17 17 ASN ASN A . n A 1 16 THR 16 18 18 THR THR A . n A 1 17 LEU 17 19 19 LEU LEU A . n A 1 18 THR 18 20 20 THR THR A . n A 1 19 GLU 19 21 21 GLU GLU A . n A 1 20 ARG 20 22 22 ARG ARG A . n A 1 21 GLY 21 23 23 GLY GLY A . n A 1 22 VAL 22 24 24 VAL VAL A . n A 1 23 GLU 23 25 25 GLU GLU A . n A 1 24 VAL 24 26 26 VAL VAL A . n A 1 25 VAL 25 27 27 VAL VAL A . n A 1 26 ASN 26 28 28 ASN ASN A . n A 1 27 ALA 27 29 29 ALA ALA A . n A 1 28 THR 28 30 30 THR THR A . n A 1 29 GLU 29 31 31 GLU GLU A . n A 1 30 THR 30 32 32 THR THR A . n A 1 31 VAL 31 33 33 VAL VAL A . n A 1 32 GLU 32 34 34 GLU GLU A . n A 1 33 ARG 33 35 35 ARG ARG A . n A 1 34 THR 34 36 36 THR THR A . n A 1 35 ASN 35 37 37 ASN ASN A . n A 1 36 ILE 36 38 38 ILE ILE A . n A 1 37 PRO 37 39 39 PRO PRO A . n A 1 38 ARG 38 40 40 ARG ARG A . n A 1 39 ILE 39 41 41 ILE ILE A . n A 1 40 CYS 40 42 42 CYS CYS A . n A 1 41 SER 41 43 43 SER SER A . n A 1 42 LYS 42 44 44 LYS LYS A . n A 1 43 GLY 43 45 45 GLY GLY A . n A 1 44 LYS 44 46 46 LYS LYS A . n A 1 45 ARG 45 47 47 ARG ARG A . n A 1 46 THR 46 48 48 THR THR A . n A 1 47 VAL 47 49 49 VAL VAL A . n A 1 48 ASP 48 50 50 ASP ASP A . n A 1 49 LEU 49 51 51 LEU LEU A . n A 1 50 GLY 50 52 52 GLY GLY A . n A 1 51 GLN 51 53 53 GLN GLN A . n A 1 52 CYS 52 54 54 CYS CYS A . n A 1 53 GLY 53 55 55 GLY GLY A . n A 1 54 LEU 54 56 56 LEU LEU A . n A 1 55 LEU 55 57 57 LEU LEU A . n A 1 56 GLY 56 58 58 GLY GLY A . n A 1 57 THR 57 59 59 THR THR A . n A 1 58 ILE 58 60 60 ILE ILE A . n A 1 59 THR 59 61 61 THR THR A . n A 1 60 GLY 60 62 62 GLY GLY A . n A 1 61 PRO 61 63 63 PRO PRO A . n A 1 62 PRO 62 64 64 PRO PRO A . n A 1 63 GLN 63 65 65 GLN GLN A . n A 1 64 CYS 64 66 66 CYS CYS A . n A 1 65 ASP 65 67 67 ASP ASP A . n A 1 66 GLN 66 68 68 GLN GLN A . n A 1 67 PHE 67 69 69 PHE PHE A . n A 1 68 LEU 68 70 70 LEU LEU A . n A 1 69 GLU 69 71 71 GLU GLU A . n A 1 70 PHE 70 72 72 PHE PHE A . n A 1 71 SER 71 73 73 SER SER A . n A 1 72 ALA 72 74 74 ALA ALA A . n A 1 73 ASP 73 75 75 ASP ASP A . n A 1 74 LEU 74 76 76 LEU LEU A . n A 1 75 ILE 75 77 77 ILE ILE A . n A 1 76 ILE 76 78 78 ILE ILE A . n A 1 77 GLU 77 79 79 GLU GLU A . n A 1 78 ARG 78 80 80 ARG ARG A . n A 1 79 ARG 79 81 81 ARG ARG A . n A 1 80 GLU 80 82 82 GLU GLU A . n A 1 81 GLY 81 83 83 GLY GLY A . n A 1 82 SER 82 84 84 SER SER A . n A 1 83 ASP 83 85 85 ASP ASP A . n A 1 84 VAL 84 86 86 VAL VAL A . n A 1 85 CYS 85 87 87 CYS CYS A . n A 1 86 TYR 86 88 88 TYR TYR A . n A 1 87 PRO 87 89 89 PRO PRO A . n A 1 88 GLY 88 90 90 GLY GLY A . n A 1 89 LYS 89 91 91 LYS LYS A . n A 1 90 PHE 90 92 92 PHE PHE A . n A 1 91 VAL 91 93 93 VAL VAL A . n A 1 92 ASN 92 94 94 ASN ASN A . n A 1 93 GLU 93 95 95 GLU GLU A . n A 1 94 GLU 94 96 96 GLU GLU A . n A 1 95 ALA 95 97 97 ALA ALA A . n A 1 96 LEU 96 98 98 LEU LEU A . n A 1 97 ARG 97 99 99 ARG ARG A . n A 1 98 GLN 98 100 100 GLN GLN A . n A 1 99 ILE 99 101 101 ILE ILE A . n A 1 100 LEU 100 102 102 LEU LEU A . n A 1 101 ARG 101 103 103 ARG ARG A . n A 1 102 GLU 102 104 104 GLU GLU A . n A 1 103 SER 103 105 105 SER SER A . n A 1 104 GLY 104 106 106 GLY GLY A . n A 1 105 GLY 105 107 107 GLY GLY A . n A 1 106 ILE 106 108 108 ILE ILE A . n A 1 107 ASP 107 109 109 ASP ASP A . n A 1 108 LYS 108 110 110 LYS LYS A . n A 1 109 GLU 109 111 111 GLU GLU A . n A 1 110 ALA 110 112 112 ALA ALA A . n A 1 111 MET 111 113 113 MET MET A . n A 1 112 GLY 112 114 114 GLY GLY A . n A 1 113 PHE 113 115 115 PHE PHE A . n A 1 114 THR 114 116 116 THR THR A . n A 1 115 TYR 115 117 117 TYR TYR A . n A 1 116 SER 116 118 118 SER SER A . n A 1 117 GLY 117 119 119 GLY GLY A . n A 1 118 ILE 118 120 120 ILE ILE A . n A 1 119 ARG 119 121 121 ARG ARG A . n A 1 120 THR 120 122 122 THR THR A . n A 1 121 ASN 121 123 123 ASN ASN A . n A 1 122 GLY 122 124 124 GLY GLY A . n A 1 123 ALA 123 125 125 ALA ALA A . n A 1 124 THR 124 126 126 THR THR A . n A 1 125 SER 125 127 127 SER SER A . n A 1 126 ALA 126 128 128 ALA ALA A . n A 1 127 CYS 127 129 129 CYS CYS A . n A 1 128 ARG 128 130 130 ARG ARG A . n A 1 129 ARG 129 131 131 ARG ARG A . n A 1 130 SER 130 132 132 SER SER A . n A 1 131 GLY 131 133 133 GLY GLY A . n A 1 132 SER 132 134 134 SER SER A . n A 1 133 SER 133 135 135 SER SER A . n A 1 134 PHE 134 136 136 PHE PHE A . n A 1 135 TYR 135 137 137 TYR TYR A . n A 1 136 ALA 136 138 138 ALA ALA A . n A 1 137 GLU 137 139 139 GLU GLU A . n A 1 138 MET 138 140 140 MET MET A . n A 1 139 LYS 139 141 141 LYS LYS A . n A 1 140 TRP 140 142 142 TRP TRP A . n A 1 141 LEU 141 143 143 LEU LEU A . n A 1 142 LEU 142 144 144 LEU LEU A . n A 1 143 SER 143 145 145 SER SER A . n A 1 144 ASN 144 146 146 ASN ASN A . n A 1 145 THR 145 147 147 THR THR A . n A 1 146 ASP 146 148 148 ASP ASP A . n A 1 147 ASN 147 149 149 ASN ASN A . n A 1 148 ALA 148 150 150 ALA ALA A . n A 1 149 ALA 149 151 151 ALA ALA A . n A 1 150 PHE 150 152 152 PHE PHE A . n A 1 151 PRO 151 153 153 PRO PRO A . n A 1 152 GLN 152 154 154 GLN GLN A . n A 1 153 MET 153 155 155 MET MET A . n A 1 154 THR 154 156 156 THR THR A . n A 1 155 LYS 155 157 157 LYS LYS A . n A 1 156 SER 156 158 158 SER SER A . n A 1 157 TYR 157 159 159 TYR TYR A . n A 1 158 LYS 158 160 160 LYS LYS A . n A 1 159 ASN 159 161 161 ASN ASN A . n A 1 160 THR 160 162 162 THR THR A . n A 1 161 ARG 161 163 163 ARG ARG A . n A 1 162 LYS 162 164 164 LYS LYS A . n A 1 163 SER 163 165 165 SER SER A . n A 1 164 PRO 164 166 166 PRO PRO A . n A 1 165 ALA 165 167 167 ALA ALA A . n A 1 166 LEU 166 168 168 LEU LEU A . n A 1 167 ILE 167 169 169 ILE ILE A . n A 1 168 VAL 168 170 170 VAL VAL A . n A 1 169 TRP 169 171 171 TRP TRP A . n A 1 170 GLY 170 172 172 GLY GLY A . n A 1 171 ILE 171 173 173 ILE ILE A . n A 1 172 HIS 172 174 174 HIS HIS A . n A 1 173 HIS 173 175 175 HIS HIS A . n A 1 174 SER 174 176 176 SER SER A . n A 1 175 VAL 175 177 177 VAL VAL A . n A 1 176 SER 176 178 178 SER SER A . n A 1 177 THR 177 179 179 THR THR A . n A 1 178 ALA 178 180 180 ALA ALA A . n A 1 179 GLU 179 181 181 GLU GLU A . n A 1 180 GLN 180 182 182 GLN GLN A . n A 1 181 THR 181 183 183 THR THR A . n A 1 182 LYS 182 184 184 LYS LYS A . n A 1 183 LEU 183 185 185 LEU LEU A . n A 1 184 TYR 184 186 186 TYR TYR A . n A 1 185 GLY 185 187 187 GLY GLY A . n A 1 186 SER 186 188 188 SER SER A . n A 1 187 GLY 187 189 189 GLY GLY A . n A 1 188 ASN 188 190 190 ASN ASN A . n A 1 189 LYS 189 191 191 LYS LYS A . n A 1 190 LEU 190 192 192 LEU LEU A . n A 1 191 VAL 191 193 193 VAL VAL A . n A 1 192 THR 192 194 194 THR THR A . n A 1 193 VAL 193 195 195 VAL VAL A . n A 1 194 GLY 194 196 196 GLY GLY A . n A 1 195 SER 195 197 197 SER SER A . n A 1 196 SER 196 198 198 SER SER A . n A 1 197 ASN 197 199 199 ASN ASN A . n A 1 198 TYR 198 200 200 TYR TYR A . n A 1 199 GLN 199 201 201 GLN GLN A . n A 1 200 GLN 200 202 202 GLN GLN A . n A 1 201 SER 201 203 203 SER SER A . n A 1 202 PHE 202 204 204 PHE PHE A . n A 1 203 VAL 203 205 205 VAL VAL A . n A 1 204 PRO 204 206 206 PRO PRO A . n A 1 205 SER 205 207 207 SER SER A . n A 1 206 PRO 206 208 208 PRO PRO A . n A 1 207 GLY 207 209 209 GLY GLY A . n A 1 208 ALA 208 210 210 ALA ALA A . n A 1 209 ARG 209 211 211 ARG ARG A . n A 1 210 PRO 210 212 212 PRO PRO A . n A 1 211 GLN 211 213 213 GLN GLN A . n A 1 212 VAL 212 214 214 VAL VAL A . n A 1 213 ASN 213 215 215 ASN ASN A . n A 1 214 GLY 214 216 216 GLY GLY A . n A 1 215 LEU 215 217 217 LEU LEU A . n A 1 216 SER 216 218 218 SER SER A . n A 1 217 GLY 217 219 219 GLY GLY A . n A 1 218 ARG 218 220 220 ARG ARG A . n A 1 219 ILE 219 221 221 ILE ILE A . n A 1 220 ASP 220 222 222 ASP ASP A . n A 1 221 PHE 221 223 223 PHE PHE A . n A 1 222 HIS 222 224 224 HIS HIS A . n A 1 223 TRP 223 225 225 TRP TRP A . n A 1 224 LEU 224 226 226 LEU LEU A . n A 1 225 MET 225 227 227 MET MET A . n A 1 226 LEU 226 228 228 LEU LEU A . n A 1 227 ASN 227 229 229 ASN ASN A . n A 1 228 PRO 228 230 230 PRO PRO A . n A 1 229 ASN 229 231 231 ASN ASN A . n A 1 230 ASP 230 232 232 ASP ASP A . n A 1 231 THR 231 233 233 THR THR A . n A 1 232 VAL 232 234 234 VAL VAL A . n A 1 233 THR 233 235 235 THR THR A . n A 1 234 PHE 234 236 236 PHE PHE A . n A 1 235 SER 235 237 237 SER SER A . n A 1 236 PHE 236 238 238 PHE PHE A . n A 1 237 ASN 237 239 239 ASN ASN A . n A 1 238 GLY 238 240 240 GLY GLY A . n A 1 239 ALA 239 241 241 ALA ALA A . n A 1 240 PHE 240 242 242 PHE PHE A . n A 1 241 ILE 241 243 243 ILE ILE A . n A 1 242 ALA 242 244 244 ALA ALA A . n A 1 243 PRO 243 245 245 PRO PRO A . n A 1 244 ASP 244 246 246 ASP ASP A . n A 1 245 ARG 245 247 247 ARG ARG A . n A 1 246 ALA 246 248 248 ALA ALA A . n A 1 247 SER 247 249 249 SER SER A . n A 1 248 PHE 248 250 250 PHE PHE A . n A 1 249 LEU 249 251 251 LEU LEU A . n A 1 250 ARG 250 252 252 ARG ARG A . n A 1 251 GLY 251 253 253 GLY GLY A . n A 1 252 LYS 252 254 254 LYS LYS A . n A 1 253 SER 253 255 255 SER SER A . n A 1 254 MET 254 256 256 MET MET A . n A 1 255 GLY 255 257 257 GLY GLY A . n A 1 256 ILE 256 258 258 ILE ILE A . n A 1 257 GLN 257 259 259 GLN GLN A . n A 1 258 SER 258 260 260 SER SER A . n A 1 259 GLY 259 261 261 GLY GLY A . n A 1 260 VAL 260 262 262 VAL VAL A . n A 1 261 GLN 261 263 263 GLN GLN A . n A 1 262 VAL 262 264 264 VAL VAL A . n A 1 263 ASP 263 265 265 ASP ASP A . n A 1 264 ALA 264 266 266 ALA ALA A . n A 1 265 ASN 265 267 267 ASN ASN A . n A 1 266 CYS 266 268 268 CYS CYS A . n A 1 267 GLU 267 269 269 GLU GLU A . n A 1 268 GLY 268 270 270 GLY GLY A . n A 1 269 ASP 269 271 271 ASP ASP A . n A 1 270 CYS 270 272 272 CYS CYS A . n A 1 271 TYR 271 273 273 TYR TYR A . n A 1 272 HIS 272 274 274 HIS HIS A . n A 1 273 SER 273 275 275 SER SER A . n A 1 274 GLY 274 276 276 GLY GLY A . n A 1 275 GLY 275 277 277 GLY GLY A . n A 1 276 THR 276 278 278 THR THR A . n A 1 277 ILE 277 279 279 ILE ILE A . n A 1 278 ILE 278 280 280 ILE ILE A . n A 1 279 SER 279 281 281 SER SER A . n A 1 280 ASN 280 282 282 ASN ASN A . n A 1 281 LEU 281 283 283 LEU LEU A . n A 1 282 PRO 282 284 284 PRO PRO A . n A 1 283 PHE 283 285 285 PHE PHE A . n A 1 284 GLN 284 286 286 GLN GLN A . n A 1 285 ASN 285 287 287 ASN ASN A . n A 1 286 ILE 286 288 288 ILE ILE A . n A 1 287 ASP 287 289 289 ASP ASP A . n A 1 288 SER 288 290 290 SER SER A . n A 1 289 ARG 289 291 291 ARG ARG A . n A 1 290 ALA 290 292 292 ALA ALA A . n A 1 291 VAL 291 293 293 VAL VAL A . n A 1 292 GLY 292 294 294 GLY GLY A . n A 1 293 LYS 293 295 295 LYS LYS A . n A 1 294 CYS 294 296 296 CYS CYS A . n A 1 295 PRO 295 297 297 PRO PRO A . n A 1 296 ARG 296 298 298 ARG ARG A . n A 1 297 TYR 297 299 299 TYR TYR A . n A 1 298 VAL 298 300 300 VAL VAL A . n A 1 299 LYS 299 301 301 LYS LYS A . n A 1 300 GLN 300 302 302 GLN GLN A . n A 1 301 ARG 301 303 303 ARG ARG A . n A 1 302 SER 302 304 304 SER SER A . n A 1 303 LEU 303 305 305 LEU LEU A . n A 1 304 LEU 304 306 306 LEU LEU A . n A 1 305 LEU 305 307 307 LEU LEU A . n A 1 306 ALA 306 308 308 ALA ALA A . n A 1 307 THR 307 309 309 THR THR A . n A 1 308 GLY 308 310 310 GLY GLY A . n A 1 309 MET 309 311 311 MET MET A . n A 1 310 LYS 310 312 312 LYS LYS A . n A 1 311 ASN 311 313 313 ASN ASN A . n A 1 312 VAL 312 314 314 VAL VAL A . n A 1 313 PRO 313 315 315 PRO PRO A . n A 1 314 GLU 314 316 316 GLU GLU A . n B 2 1 GLY 1 322 ? ? ? B . n B 2 2 LEU 2 323 ? ? ? B . n B 2 3 PHE 3 324 ? ? ? B . n B 2 4 GLY 4 325 325 GLY GLY B . n B 2 5 ALA 5 326 326 ALA ALA B . n B 2 6 ILE 6 327 327 ILE ILE B . n B 2 7 ALA 7 328 328 ALA ALA B . n B 2 8 GLY 8 329 329 GLY GLY B . n B 2 9 PHE 9 330 330 PHE PHE B . n B 2 10 ILE 10 331 331 ILE ILE B . n B 2 11 GLU 11 332 332 GLU GLU B . n B 2 12 ASN 12 333 333 ASN ASN B . n B 2 13 GLY 13 334 334 GLY GLY B . n B 2 14 TRP 14 335 335 TRP TRP B . n B 2 15 GLU 15 336 336 GLU GLU B . n B 2 16 GLY 16 337 337 GLY GLY B . n B 2 17 LEU 17 338 338 LEU LEU B . n B 2 18 ILE 18 339 339 ILE ILE B . n B 2 19 ASP 19 340 340 ASP ASP B . n B 2 20 GLY 20 341 341 GLY GLY B . n B 2 21 TRP 21 342 342 TRP TRP B . n B 2 22 TYR 22 343 343 TYR TYR B . n B 2 23 GLY 23 344 344 GLY GLY B . n B 2 24 PHE 24 345 345 PHE PHE B . n B 2 25 ARG 25 346 346 ARG ARG B . n B 2 26 HIS 26 347 347 HIS HIS B . n B 2 27 GLN 27 348 348 GLN GLN B . n B 2 28 ASN 28 349 349 ASN ASN B . n B 2 29 ALA 29 350 350 ALA ALA B . n B 2 30 GLN 30 351 351 GLN GLN B . n B 2 31 GLY 31 352 352 GLY GLY B . n B 2 32 GLU 32 353 353 GLU GLU B . n B 2 33 GLY 33 354 354 GLY GLY B . n B 2 34 THR 34 355 355 THR THR B . n B 2 35 ALA 35 356 356 ALA ALA B . n B 2 36 ALA 36 357 357 ALA ALA B . n B 2 37 ASP 37 358 358 ASP ASP B . n B 2 38 TYR 38 359 359 TYR TYR B . n B 2 39 LYS 39 360 360 LYS LYS B . n B 2 40 SER 40 361 361 SER SER B . n B 2 41 THR 41 362 362 THR THR B . n B 2 42 GLN 42 363 363 GLN GLN B . n B 2 43 SER 43 364 364 SER SER B . n B 2 44 ALA 44 365 365 ALA ALA B . n B 2 45 ILE 45 366 366 ILE ILE B . n B 2 46 ASP 46 367 367 ASP ASP B . n B 2 47 GLN 47 368 368 GLN GLN B . n B 2 48 ILE 48 369 369 ILE ILE B . n B 2 49 THR 49 370 370 THR THR B . n B 2 50 GLY 50 371 371 GLY GLY B . n B 2 51 LYS 51 372 372 LYS LYS B . n B 2 52 LEU 52 373 373 LEU LEU B . n B 2 53 ASN 53 374 374 ASN ASN B . n B 2 54 ARG 54 375 375 ARG ARG B . n B 2 55 LEU 55 376 376 LEU LEU B . n B 2 56 ILE 56 377 377 ILE ILE B . n B 2 57 GLU 57 378 378 GLU GLU B . n B 2 58 LYS 58 379 379 LYS LYS B . n B 2 59 THR 59 380 380 THR THR B . n B 2 60 ASN 60 381 381 ASN ASN B . n B 2 61 GLN 61 382 382 GLN GLN B . n B 2 62 GLN 62 383 383 GLN GLN B . n B 2 63 PHE 63 384 384 PHE PHE B . n B 2 64 GLU 64 385 385 GLU GLU B . n B 2 65 LEU 65 386 386 LEU LEU B . n B 2 66 ILE 66 387 387 ILE ILE B . n B 2 67 ASP 67 388 388 ASP ASP B . n B 2 68 ASN 68 389 389 ASN ASN B . n B 2 69 GLU 69 390 390 GLU GLU B . n B 2 70 PHE 70 391 391 PHE PHE B . n B 2 71 ASN 71 392 392 ASN ASN B . n B 2 72 GLU 72 393 393 GLU GLU B . n B 2 73 VAL 73 394 394 VAL VAL B . n B 2 74 GLU 74 395 395 GLU GLU B . n B 2 75 LYS 75 396 396 LYS LYS B . n B 2 76 GLN 76 397 397 GLN GLN B . n B 2 77 ILE 77 398 398 ILE ILE B . n B 2 78 GLY 78 399 399 GLY GLY B . n B 2 79 ASN 79 400 400 ASN ASN B . n B 2 80 VAL 80 401 401 VAL VAL B . n B 2 81 ILE 81 402 402 ILE ILE B . n B 2 82 ASN 82 403 403 ASN ASN B . n B 2 83 TRP 83 404 404 TRP TRP B . n B 2 84 THR 84 405 405 THR THR B . n B 2 85 ARG 85 406 406 ARG ARG B . n B 2 86 ASP 86 407 407 ASP ASP B . n B 2 87 SER 87 408 408 SER SER B . n B 2 88 ILE 88 409 409 ILE ILE B . n B 2 89 THR 89 410 410 THR THR B . n B 2 90 GLU 90 411 411 GLU GLU B . n B 2 91 VAL 91 412 412 VAL VAL B . n B 2 92 TRP 92 413 413 TRP TRP B . n B 2 93 SER 93 414 414 SER SER B . n B 2 94 TYR 94 415 415 TYR TYR B . n B 2 95 ASN 95 416 416 ASN ASN B . n B 2 96 ALA 96 417 417 ALA ALA B . n B 2 97 GLU 97 418 418 GLU GLU B . n B 2 98 LEU 98 419 419 LEU LEU B . n B 2 99 LEU 99 420 420 LEU LEU B . n B 2 100 VAL 100 421 421 VAL VAL B . n B 2 101 ALA 101 422 422 ALA ALA B . n B 2 102 MET 102 423 423 MET MET B . n B 2 103 GLU 103 424 424 GLU GLU B . n B 2 104 ASN 104 425 425 ASN ASN B . n B 2 105 GLN 105 426 426 GLN GLN B . n B 2 106 HIS 106 427 427 HIS HIS B . n B 2 107 THR 107 428 428 THR THR B . n B 2 108 ILE 108 429 429 ILE ILE B . n B 2 109 ASP 109 430 430 ASP ASP B . n B 2 110 LEU 110 431 431 LEU LEU B . n B 2 111 ALA 111 432 432 ALA ALA B . n B 2 112 ASP 112 433 433 ASP ASP B . n B 2 113 SER 113 434 434 SER SER B . n B 2 114 GLU 114 435 435 GLU GLU B . n B 2 115 MET 115 436 436 MET MET B . n B 2 116 ASP 116 437 437 ASP ASP B . n B 2 117 LYS 117 438 438 LYS LYS B . n B 2 118 LEU 118 439 439 LEU LEU B . n B 2 119 TYR 119 440 440 TYR TYR B . n B 2 120 GLU 120 441 441 GLU GLU B . n B 2 121 ARG 121 442 442 ARG ARG B . n B 2 122 VAL 122 443 443 VAL VAL B . n B 2 123 LYS 123 444 444 LYS LYS B . n B 2 124 ARG 124 445 445 ARG ARG B . n B 2 125 GLN 125 446 446 GLN GLN B . n B 2 126 LEU 126 447 447 LEU LEU B . n B 2 127 ARG 127 448 448 ARG ARG B . n B 2 128 GLU 128 449 449 GLU GLU B . n B 2 129 ASN 129 450 450 ASN ASN B . n B 2 130 ALA 130 451 451 ALA ALA B . n B 2 131 GLU 131 452 452 GLU GLU B . n B 2 132 GLU 132 453 453 GLU GLU B . n B 2 133 ASP 133 454 454 ASP ASP B . n B 2 134 GLY 134 455 455 GLY GLY B . n B 2 135 THR 135 456 456 THR THR B . n B 2 136 GLY 136 457 457 GLY GLY B . n B 2 137 CYS 137 458 458 CYS CYS B . n B 2 138 PHE 138 459 459 PHE PHE B . n B 2 139 GLU 139 460 460 GLU GLU B . n B 2 140 ILE 140 461 461 ILE ILE B . n B 2 141 PHE 141 462 462 PHE PHE B . n B 2 142 HIS 142 463 463 HIS HIS B . n B 2 143 LYS 143 464 464 LYS LYS B . n B 2 144 CYS 144 465 465 CYS CYS B . n B 2 145 ASP 145 466 466 ASP ASP B . n B 2 146 ASP 146 467 467 ASP ASP B . n B 2 147 ASP 147 468 468 ASP ASP B . n B 2 148 CYS 148 469 469 CYS CYS B . n B 2 149 MET 149 470 470 MET MET B . n B 2 150 ALA 150 471 471 ALA ALA B . n B 2 151 SER 151 472 472 SER SER B . n B 2 152 ILE 152 473 473 ILE ILE B . n B 2 153 ARG 153 474 474 ARG ARG B . n B 2 154 ASN 154 475 475 ASN ASN B . n B 2 155 ASN 155 476 476 ASN ASN B . n B 2 156 THR 156 477 477 THR THR B . n B 2 157 TYR 157 478 478 TYR TYR B . n B 2 158 ASP 158 479 479 ASP ASP B . n B 2 159 HIS 159 480 480 HIS HIS B . n B 2 160 SER 160 481 481 SER SER B . n B 2 161 LYS 161 482 482 LYS LYS B . n B 2 162 TYR 162 483 483 TYR TYR B . n B 2 163 ARG 163 484 484 ARG ARG B . n B 2 164 GLU 164 485 485 GLU GLU B . n B 2 165 GLU 165 486 486 GLU GLU B . n B 2 166 ALA 166 487 487 ALA ALA B . n B 2 167 MET 167 488 488 MET MET B . n B 2 168 GLN 168 489 489 GLN GLN B . n B 2 169 ASN 169 490 490 ASN ASN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 601 601 NAG NAG A . E 4 NAG 1 602 602 NAG NAG A . F 4 NAG 1 501 603 NAG NAG B . G 5 HOH 1 701 3 HOH HOH A . G 5 HOH 2 702 4 HOH HOH A . G 5 HOH 3 703 5 HOH HOH A . G 5 HOH 4 704 8 HOH HOH A . G 5 HOH 5 705 9 HOH HOH A . G 5 HOH 6 706 10 HOH HOH A . G 5 HOH 7 707 11 HOH HOH A . G 5 HOH 8 708 12 HOH HOH A . G 5 HOH 9 709 13 HOH HOH A . G 5 HOH 10 710 15 HOH HOH A . G 5 HOH 11 711 17 HOH HOH A . G 5 HOH 12 712 18 HOH HOH A . G 5 HOH 13 713 19 HOH HOH A . G 5 HOH 14 714 20 HOH HOH A . G 5 HOH 15 715 21 HOH HOH A . G 5 HOH 16 716 22 HOH HOH A . G 5 HOH 17 717 25 HOH HOH A . G 5 HOH 18 718 26 HOH HOH A . G 5 HOH 19 719 27 HOH HOH A . G 5 HOH 20 720 29 HOH HOH A . G 5 HOH 21 721 30 HOH HOH A . G 5 HOH 22 722 31 HOH HOH A . G 5 HOH 23 723 32 HOH HOH A . G 5 HOH 24 724 33 HOH HOH A . G 5 HOH 25 725 34 HOH HOH A . G 5 HOH 26 726 36 HOH HOH A . G 5 HOH 27 727 37 HOH HOH A . G 5 HOH 28 728 38 HOH HOH A . G 5 HOH 29 729 39 HOH HOH A . G 5 HOH 30 730 40 HOH HOH A . G 5 HOH 31 731 42 HOH HOH A . G 5 HOH 32 732 44 HOH HOH A . G 5 HOH 33 733 46 HOH HOH A . G 5 HOH 34 734 49 HOH HOH A . G 5 HOH 35 735 50 HOH HOH A . G 5 HOH 36 736 51 HOH HOH A . G 5 HOH 37 737 52 HOH HOH A . G 5 HOH 38 738 53 HOH HOH A . G 5 HOH 39 739 56 HOH HOH A . G 5 HOH 40 740 57 HOH HOH A . G 5 HOH 41 741 58 HOH HOH A . G 5 HOH 42 742 59 HOH HOH A . G 5 HOH 43 743 60 HOH HOH A . G 5 HOH 44 744 62 HOH HOH A . G 5 HOH 45 745 63 HOH HOH A . G 5 HOH 46 746 65 HOH HOH A . G 5 HOH 47 747 66 HOH HOH A . G 5 HOH 48 748 68 HOH HOH A . G 5 HOH 49 749 69 HOH HOH A . G 5 HOH 50 750 74 HOH HOH A . G 5 HOH 51 751 75 HOH HOH A . G 5 HOH 52 752 77 HOH HOH A . G 5 HOH 53 753 81 HOH HOH A . G 5 HOH 54 754 82 HOH HOH A . G 5 HOH 55 755 83 HOH HOH A . G 5 HOH 56 756 84 HOH HOH A . G 5 HOH 57 757 85 HOH HOH A . G 5 HOH 58 758 86 HOH HOH A . H 5 HOH 1 601 1 HOH HOH B . H 5 HOH 2 602 2 HOH HOH B . H 5 HOH 3 603 6 HOH HOH B . H 5 HOH 4 604 7 HOH HOH B . H 5 HOH 5 605 14 HOH HOH B . H 5 HOH 6 606 16 HOH HOH B . H 5 HOH 7 607 23 HOH HOH B . H 5 HOH 8 608 24 HOH HOH B . H 5 HOH 9 609 35 HOH HOH B . H 5 HOH 10 610 41 HOH HOH B . H 5 HOH 11 611 43 HOH HOH B . H 5 HOH 12 612 45 HOH HOH B . H 5 HOH 13 613 47 HOH HOH B . H 5 HOH 14 614 48 HOH HOH B . H 5 HOH 15 615 55 HOH HOH B . H 5 HOH 16 616 61 HOH HOH B . H 5 HOH 17 617 64 HOH HOH B . H 5 HOH 18 618 67 HOH HOH B . H 5 HOH 19 619 70 HOH HOH B . H 5 HOH 20 620 71 HOH HOH B . H 5 HOH 21 621 72 HOH HOH B . H 5 HOH 22 622 73 HOH HOH B . H 5 HOH 23 623 76 HOH HOH B . H 5 HOH 24 624 78 HOH HOH B . H 5 HOH 25 625 79 HOH HOH B . H 5 HOH 26 626 80 HOH HOH B . H 5 HOH 27 627 87 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 229 A ASN 231 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 26 A ASN 28 ? ASN 'GLYCOSYLATION SITE' 3 B ASN 82 B ASN 403 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 37090 ? 1 MORE -87 ? 1 'SSA (A^2)' 57220 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 58.5300000000 0.8660254038 -0.5000000000 0.0000000000 -101.3769337670 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 117.0600000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 729 ? G HOH . 2 1 B HOH 602 ? H HOH . 3 1 B HOH 613 ? H HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' chem_comp 4 2 'Structure model' entity 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_nonpoly_scheme 13 2 'Structure model' pdbx_struct_assembly_gen 14 2 'Structure model' pdbx_struct_special_symmetry 15 2 'Structure model' pdbx_validate_close_contact 16 2 'Structure model' struct_asym 17 2 'Structure model' struct_conn 18 2 'Structure model' struct_site 19 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 2 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 2 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 2 'Structure model' '_atom_site_anisotrop.type_symbol' 28 2 'Structure model' '_chem_comp.name' 29 2 'Structure model' '_chem_comp.type' 30 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 31 2 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 32 2 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 33 2 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 34 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 35 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 36 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_1' 37 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 38 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 39 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 40 2 'Structure model' '_struct_conn.pdbx_dist_value' 41 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 42 2 'Structure model' '_struct_conn.pdbx_role' 43 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 44 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 45 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 46 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 47 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 48 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 49 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 50 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 51 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 52 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 53 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 54 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 55 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 28 ? ? C2 A NAG 601 ? ? 2.00 2 1 O3 C GAL 3 ? ? C3 C SIA 4 ? ? 2.12 3 1 ND2 B ASN 403 ? ? C2 B NAG 501 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 39 ? ? -80.78 43.75 2 1 THR A 122 ? ? -156.04 1.61 3 1 ARG A 131 ? ? -131.05 -108.00 4 1 SER A 135 ? ? -129.65 -155.85 5 1 LEU A 144 ? ? -113.19 -163.91 6 1 ASP A 148 ? ? -57.41 -7.53 7 1 ASN A 149 ? ? -141.57 -112.13 8 1 ALA A 150 ? ? 62.88 -178.34 9 1 GLN A 154 ? ? -59.64 97.12 10 1 SER A 197 ? ? -129.87 -160.95 11 1 ASN A 199 ? ? -163.67 -14.40 12 1 GLN A 201 ? ? -162.33 96.25 13 1 SER A 207 ? ? -150.05 79.75 14 1 ASN A 231 ? ? 68.16 -7.85 15 1 ASN A 239 ? ? -143.97 21.41 16 1 ALA B 326 ? ? -90.47 -103.20 17 1 ILE B 327 ? ? 44.41 -146.29 18 1 ALA B 328 ? ? -54.32 70.68 19 1 ASN B 349 ? ? -150.39 -151.80 20 1 ALA B 356 ? ? -124.13 -163.38 21 1 ILE B 377 ? ? -65.98 95.73 22 1 LEU B 447 ? ? -101.24 -145.58 23 1 ARG B 448 ? ? -152.19 -125.10 24 1 HIS B 463 ? ? -147.53 16.22 25 1 LYS B 464 ? ? 49.83 83.31 26 1 HIS B 480 ? ? -86.12 38.06 27 1 SER B 481 ? ? -160.59 -29.14 28 1 LYS B 482 ? ? -89.68 31.92 29 1 TYR B 483 ? ? -156.73 -8.45 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id VAL _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 170 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CG2 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id VAL _pdbx_unobs_or_zero_occ_atoms.label_seq_id 168 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 322 ? B GLY 1 2 1 Y 1 B LEU 323 ? B LEU 2 3 1 Y 1 B PHE 324 ? B PHE 3 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 GAL 1 C GAL 1 A GAL 804 n C 3 NAG 2 C NAG 2 A NAG 803 n C 3 GAL 3 C GAL 3 A GAL 802 n C 3 SIA 4 C SIA 4 A SIA 801 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-3DGalpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,4,3/[a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-1-3/a3-b1_b4-c1_c3-d2' WURCS PDB2Glycan 1.1.0 3 3 '[][b-D-Galp]{[(3+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 GAL O3 HO3 sing ? 2 3 3 GAL C1 O1 2 NAG O4 HO4 sing ? 3 3 4 SIA C2 O2 3 GAL O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 GAL 1 n 3 NAG 2 n 3 GAL 3 n 3 SIA 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH #