HEADER TRANSCRIPTION/RNA 16-MAY-13 4KRE TITLE STRUCTURE OF HUMAN ARGONAUTE-1 BOUND TO ENDOGENOUS SF9 RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGONAUTE-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARGONAUTE1, HAGO1, EUKARYOTIC TRANSLATION INITIATION FACTOR COMPND 5 2C 1, EIF-2C 1, EIF2C 1, PUTATIVE RNA-BINDING PROTEIN Q99; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'- COMPND 9 R(P*AP*AP*UP*AP*UP*UP*AP*AP*A*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'); COMPND 10 CHAIN: R; COMPND 11 OTHER_DETAILS: ENDOGENOUS SF9 RNA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AGO1, EIF2C1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MULTI-BAC, PFL; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SPODOPTERA FRUGIPERDA; SOURCE 13 ORGANISM_TAXID: 7108; SOURCE 14 OTHER_DETAILS: MIXTURE OF CO-PURIFIED ENDOGENOUS SF9 RNA KEYWDS EUKARYOTIC ARGONAUTE, GENE REGULATION, RNAI, SLICER, TRANSCRIPTION- KEYWDS 2 RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.R.FAEHNLE,E.ELKAYAM,L.JOSHUA-TOR REVDAT 3 28-FEB-24 4KRE 1 SEQADV REVDAT 2 17-JUL-13 4KRE 1 JRNL REVDAT 1 19-JUN-13 4KRE 0 JRNL AUTH C.R.FAEHNLE,E.ELKAYAM,A.D.HAASE,G.J.HANNON,L.JOSHUA-TOR JRNL TITL THE MAKING OF A SLICER: ACTIVATION OF HUMAN ARGONAUTE-1. JRNL REF CELL REP V. 3 1901 2013 JRNL REFN ESSN 2211-1247 JRNL PMID 23746446 JRNL DOI 10.1016/J.CELREP.2013.05.033 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 91605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9260 - 5.4426 0.93 2832 150 0.1834 0.2125 REMARK 3 2 5.4426 - 4.3230 0.98 2946 155 0.1542 0.1654 REMARK 3 3 4.3230 - 3.7775 0.98 2927 154 0.1500 0.1735 REMARK 3 4 3.7775 - 3.4325 0.99 2938 154 0.1669 0.2101 REMARK 3 5 3.4325 - 3.1867 0.99 2911 154 0.1800 0.1847 REMARK 3 6 3.1867 - 2.9989 0.99 2968 156 0.1739 0.2143 REMARK 3 7 2.9989 - 2.8488 0.99 2914 153 0.1832 0.2188 REMARK 3 8 2.8488 - 2.7249 0.99 2928 154 0.1749 0.1960 REMARK 3 9 2.7249 - 2.6200 0.99 2926 154 0.1749 0.1960 REMARK 3 10 2.6200 - 2.5297 0.99 2935 155 0.1641 0.1992 REMARK 3 11 2.5297 - 2.4506 1.00 2956 155 0.1628 0.2129 REMARK 3 12 2.4506 - 2.3806 1.00 2949 156 0.1623 0.2074 REMARK 3 13 2.3806 - 2.3179 1.00 2961 155 0.1585 0.2047 REMARK 3 14 2.3179 - 2.2614 1.00 2925 154 0.1589 0.1911 REMARK 3 15 2.2614 - 2.2100 1.00 2928 154 0.1590 0.1945 REMARK 3 16 2.2100 - 2.1629 1.00 2960 156 0.1587 0.1931 REMARK 3 17 2.1629 - 2.1197 1.00 2937 155 0.1633 0.2237 REMARK 3 18 2.1197 - 2.0797 1.00 2934 154 0.1636 0.1943 REMARK 3 19 2.0797 - 2.0426 1.00 2967 156 0.1669 0.2063 REMARK 3 20 2.0426 - 2.0079 1.00 2946 155 0.1668 0.2099 REMARK 3 21 2.0079 - 1.9756 1.00 2913 154 0.1773 0.2154 REMARK 3 22 1.9756 - 1.9452 1.00 2967 156 0.1745 0.2219 REMARK 3 23 1.9452 - 1.9166 1.00 2921 154 0.1811 0.2163 REMARK 3 24 1.9166 - 1.8896 1.00 2945 155 0.1818 0.2065 REMARK 3 25 1.8896 - 1.8640 1.00 2941 155 0.1855 0.2457 REMARK 3 26 1.8640 - 1.8398 1.00 2956 155 0.1881 0.2101 REMARK 3 27 1.8398 - 1.8168 0.99 2934 155 0.2098 0.2657 REMARK 3 28 1.8168 - 1.7949 0.96 2819 148 0.2245 0.3084 REMARK 3 29 1.7949 - 1.7741 0.93 2734 144 0.2405 0.2582 REMARK 3 30 1.7741 - 1.7540 0.75 2206 116 0.2751 0.3005 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6898 REMARK 3 ANGLE : 1.184 9407 REMARK 3 CHIRALITY : 0.083 1051 REMARK 3 PLANARITY : 0.006 1166 REMARK 3 DIHEDRAL : 12.455 2649 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 19:43) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7428 10.1550 -36.5776 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.1924 REMARK 3 T33: 0.1494 T12: 0.0093 REMARK 3 T13: -0.0102 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 1.9850 L22: 1.1514 REMARK 3 L33: 2.8224 L12: 0.0374 REMARK 3 L13: -0.6882 L23: 1.3795 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: -0.2103 S13: 0.1929 REMARK 3 S21: -0.0992 S22: -0.0415 S23: -0.0433 REMARK 3 S31: -0.2769 S32: 0.2453 S33: 0.0232 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 44:169) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4628 26.9769 -63.5532 REMARK 3 T TENSOR REMARK 3 T11: 0.3874 T22: 0.1417 REMARK 3 T33: 0.1435 T12: 0.0014 REMARK 3 T13: 0.0432 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.8477 L22: 2.8198 REMARK 3 L33: 2.6306 L12: -0.3015 REMARK 3 L13: -0.0546 L23: -0.4219 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: 0.0411 S13: 0.2107 REMARK 3 S21: -0.4448 S22: -0.0602 S23: -0.0175 REMARK 3 S31: -0.5997 S32: 0.0611 S33: 0.0596 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 170:301) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9898 12.5012 -70.3629 REMARK 3 T TENSOR REMARK 3 T11: 0.2479 T22: 0.3826 REMARK 3 T33: 0.2553 T12: 0.0040 REMARK 3 T13: -0.0671 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 1.3760 L22: -0.0790 REMARK 3 L33: 2.0175 L12: -0.6054 REMARK 3 L13: 1.6092 L23: -0.9498 REMARK 3 S TENSOR REMARK 3 S11: 0.0605 S12: -0.2700 S13: -0.2160 REMARK 3 S21: -0.0412 S22: 0.1918 S23: 0.1065 REMARK 3 S31: 0.0995 S32: -0.5028 S33: -0.1727 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 302:362) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5564 14.8241 -78.7238 REMARK 3 T TENSOR REMARK 3 T11: 0.1721 T22: 0.3405 REMARK 3 T33: 0.1924 T12: -0.0055 REMARK 3 T13: -0.0716 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 2.2525 L22: 1.9265 REMARK 3 L33: 2.4155 L12: -0.1226 REMARK 3 L13: 0.9169 L23: -0.9636 REMARK 3 S TENSOR REMARK 3 S11: -0.0833 S12: -0.1701 S13: 0.0535 REMARK 3 S21: -0.0039 S22: 0.2215 S23: 0.0386 REMARK 3 S31: -0.0887 S32: -0.4129 S33: -0.0781 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 363:411) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7869 3.1289 -55.6692 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.1645 REMARK 3 T33: 0.2042 T12: 0.0408 REMARK 3 T13: 0.0431 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.3081 L22: 2.3920 REMARK 3 L33: 2.3007 L12: 1.3290 REMARK 3 L13: -1.7287 L23: -1.9033 REMARK 3 S TENSOR REMARK 3 S11: -0.2549 S12: 0.1074 S13: -0.1973 REMARK 3 S21: -0.5369 S22: 0.1101 S23: -0.0799 REMARK 3 S31: 0.3154 S32: 0.0568 S33: 0.1722 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 412:578) REMARK 3 ORIGIN FOR THE GROUP (A): -18.8360 -3.2604 -31.9817 REMARK 3 T TENSOR REMARK 3 T11: 0.1535 T22: 0.2544 REMARK 3 T33: 0.3555 T12: -0.0377 REMARK 3 T13: 0.0013 T23: 0.0648 REMARK 3 L TENSOR REMARK 3 L11: 1.2466 L22: 1.0395 REMARK 3 L33: 1.5522 L12: -0.4980 REMARK 3 L13: 0.7503 L23: -0.5882 REMARK 3 S TENSOR REMARK 3 S11: 0.0333 S12: -0.2745 S13: -0.4653 REMARK 3 S21: -0.0506 S22: 0.1658 S23: 0.4804 REMARK 3 S31: 0.1673 S32: -0.4487 S33: -0.0626 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 579:697) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1216 20.3705 -29.9743 REMARK 3 T TENSOR REMARK 3 T11: 0.1576 T22: 0.1022 REMARK 3 T33: 0.1557 T12: -0.0124 REMARK 3 T13: 0.0577 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.9400 L22: 2.0146 REMARK 3 L33: 2.3025 L12: -0.1255 REMARK 3 L13: 0.2357 L23: 0.0787 REMARK 3 S TENSOR REMARK 3 S11: 0.1174 S12: 0.0409 S13: 0.1731 REMARK 3 S21: -0.0875 S22: -0.0083 S23: 0.0417 REMARK 3 S31: -0.2298 S32: 0.0728 S33: -0.0563 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 698:803) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7484 5.7072 -36.3584 REMARK 3 T TENSOR REMARK 3 T11: 0.0915 T22: 0.0836 REMARK 3 T33: 0.0980 T12: 0.0083 REMARK 3 T13: 0.0040 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.8283 L22: 0.4790 REMARK 3 L33: 1.2717 L12: -0.2795 REMARK 3 L13: -0.6597 L23: -0.1402 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: -0.1266 S13: -0.0221 REMARK 3 S21: -0.0218 S22: -0.0369 S23: -0.0418 REMARK 3 S31: 0.0488 S32: 0.1387 S33: -0.0051 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 804:857) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0701 16.2340 -37.8093 REMARK 3 T TENSOR REMARK 3 T11: 0.1869 T22: 0.1615 REMARK 3 T33: 0.1836 T12: 0.0762 REMARK 3 T13: -0.0063 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 4.1250 L22: 4.9859 REMARK 3 L33: 1.8285 L12: -0.3094 REMARK 3 L13: 0.2439 L23: -1.4519 REMARK 3 S TENSOR REMARK 3 S11: 0.0412 S12: -0.1419 S13: 0.2443 REMARK 3 S21: -0.1866 S22: 0.0256 S23: 0.2769 REMARK 3 S31: -0.3849 S32: -0.4584 S33: -0.0530 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN R AND RESID 1:9) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5337 1.2350 -45.9817 REMARK 3 T TENSOR REMARK 3 T11: 0.3172 T22: 0.2524 REMARK 3 T33: 0.2764 T12: -0.0263 REMARK 3 T13: 0.0236 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 1.9769 L22: 2.4935 REMARK 3 L33: 2.5422 L12: -0.7606 REMARK 3 L13: 1.4016 L23: 1.3867 REMARK 3 S TENSOR REMARK 3 S11: 0.1252 S12: 0.8479 S13: 0.6298 REMARK 3 S21: -0.7043 S22: 0.0252 S23: -0.0441 REMARK 3 S31: -0.4889 S32: 0.1092 S33: -0.1389 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN R AND RESID 19:20) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9272 26.9915 -86.8925 REMARK 3 T TENSOR REMARK 3 T11: 0.4003 T22: 0.7022 REMARK 3 T33: 0.5200 T12: -0.1995 REMARK 3 T13: -0.1738 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 5.8673 L22: 4.7554 REMARK 3 L33: 1.8380 L12: -3.9400 REMARK 3 L13: -1.9910 L23: -0.2297 REMARK 3 S TENSOR REMARK 3 S11: -0.1950 S12: -0.0424 S13: 0.4988 REMARK 3 S21: 0.3827 S22: 0.5688 S23: -1.4441 REMARK 3 S31: -0.4557 S32: 0.6820 S33: -0.4159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079699. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : CRYOGENICALLY COOLED DOUBLE REMARK 200 CRYSTAL MONOCHROMETER WITH REMARK 200 HORIZONTAL FOCUSING SAGITTAL REMARK 200 BEND SECOND MONO CRYSTAL WITH 4: REMARK 200 1 MAGNIFICATION RATIO AND REMARK 200 VERTICALLY FOCUSING MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91609 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350, 9% ISO-PROPANOL, 0.1M REMARK 280 TRIS PH 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K, REMARK 280 VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.31500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 TYR A 13 REMARK 465 LEU A 14 REMARK 465 PRO A 15 REMARK 465 PRO A 16 REMARK 465 LEU A 17 REMARK 465 PRO A 82 REMARK 465 GLN A 83 REMARK 465 ASN A 108 REMARK 465 ILE A 117 REMARK 465 PRO A 118 REMARK 465 GLY A 119 REMARK 465 GLU A 120 REMARK 465 GLY A 121 REMARK 465 LYS A 122 REMARK 465 ASP A 123 REMARK 465 ASN A 240 REMARK 465 ILE A 241 REMARK 465 ASP A 242 REMARK 465 GLU A 243 REMARK 465 GLN A 272 REMARK 465 MET A 273 REMARK 465 GLN A 330 REMARK 465 GLU A 331 REMARK 465 GLN A 332 REMARK 465 LYS A 333 REMARK 465 ALA A 601 REMARK 465 GLY A 602 REMARK 465 ASP A 603 REMARK 465 GLY A 604 REMARK 465 LYS A 818 REMARK 465 GLU A 819 REMARK 465 HIS A 820 REMARK 465 ASP A 821 REMARK 465 SER A 822 REMARK 465 GLY A 823 REMARK 465 GLU A 824 REMARK 465 GLY A 825 REMARK 465 SER A 826 REMARK 465 HIS A 827 REMARK 465 ILE A 828 REMARK 465 SER A 829 REMARK 465 GLY A 830 REMARK 465 GLN A 831 REMARK 465 SER A 832 REMARK 465 ASN A 833 REMARK 465 GLY A 834 REMARK 465 A R 21 REMARK 465 A R 22 REMARK 465 A R 23 REMARK 465 A R 24 REMARK 465 A R 25 REMARK 465 A R 26 REMARK 465 A R 27 REMARK 465 A R 28 REMARK 465 A R 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A R 19 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 A R 1 P A R 1 OP3 -0.106 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 A R 2 N1 - C6 - N6 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 95 -106.86 -126.25 REMARK 500 PRO A 105 53.40 -67.52 REMARK 500 TRP A 209 -46.12 76.76 REMARK 500 CYS A 460 75.03 -150.42 REMARK 500 SER A 621 -55.53 -124.98 REMARK 500 SER A 621 -57.26 -124.12 REMARK 500 ARG A 633 -1.16 77.39 REMARK 500 ASN A 737 -47.24 70.09 REMARK 500 PHE A 742 -15.49 -145.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KRF RELATED DB: PDB DBREF 4KRE A 1 857 UNP Q9UL18 AGO1_HUMAN 1 857 DBREF 4KRE R 1 29 PDB 4KRE 4KRE 1 29 SEQADV 4KRE ALA A 0 UNP Q9UL18 EXPRESSION TAG SEQRES 1 A 858 ALA MET GLU ALA GLY PRO SER GLY ALA ALA ALA GLY ALA SEQRES 2 A 858 TYR LEU PRO PRO LEU GLN GLN VAL PHE GLN ALA PRO ARG SEQRES 3 A 858 ARG PRO GLY ILE GLY THR VAL GLY LYS PRO ILE LYS LEU SEQRES 4 A 858 LEU ALA ASN TYR PHE GLU VAL ASP ILE PRO LYS ILE ASP SEQRES 5 A 858 VAL TYR HIS TYR GLU VAL ASP ILE LYS PRO ASP LYS CYS SEQRES 6 A 858 PRO ARG ARG VAL ASN ARG GLU VAL VAL GLU TYR MET VAL SEQRES 7 A 858 GLN HIS PHE LYS PRO GLN ILE PHE GLY ASP ARG LYS PRO SEQRES 8 A 858 VAL TYR ASP GLY LYS LYS ASN ILE TYR THR VAL THR ALA SEQRES 9 A 858 LEU PRO ILE GLY ASN GLU ARG VAL ASP PHE GLU VAL THR SEQRES 10 A 858 ILE PRO GLY GLU GLY LYS ASP ARG ILE PHE LYS VAL SER SEQRES 11 A 858 ILE LYS TRP LEU ALA ILE VAL SER TRP ARG MET LEU HIS SEQRES 12 A 858 GLU ALA LEU VAL SER GLY GLN ILE PRO VAL PRO LEU GLU SEQRES 13 A 858 SER VAL GLN ALA LEU ASP VAL ALA MET ARG HIS LEU ALA SEQRES 14 A 858 SER MET ARG TYR THR PRO VAL GLY ARG SER PHE PHE SER SEQRES 15 A 858 PRO PRO GLU GLY TYR TYR HIS PRO LEU GLY GLY GLY ARG SEQRES 16 A 858 GLU VAL TRP PHE GLY PHE HIS GLN SER VAL ARG PRO ALA SEQRES 17 A 858 MET TRP LYS MET MET LEU ASN ILE ASP VAL SER ALA THR SEQRES 18 A 858 ALA PHE TYR LYS ALA GLN PRO VAL ILE GLU PHE MET CYS SEQRES 19 A 858 GLU VAL LEU ASP ILE ARG ASN ILE ASP GLU GLN PRO LYS SEQRES 20 A 858 PRO LEU THR ASP SER GLN ARG VAL ARG PHE THR LYS GLU SEQRES 21 A 858 ILE LYS GLY LEU LYS VAL GLU VAL THR HIS CYS GLY GLN SEQRES 22 A 858 MET LYS ARG LYS TYR ARG VAL CYS ASN VAL THR ARG ARG SEQRES 23 A 858 PRO ALA SER HIS GLN THR PHE PRO LEU GLN LEU GLU SER SEQRES 24 A 858 GLY GLN THR VAL GLU CYS THR VAL ALA GLN TYR PHE LYS SEQRES 25 A 858 GLN LYS TYR ASN LEU GLN LEU LYS TYR PRO HIS LEU PRO SEQRES 26 A 858 CYS LEU GLN VAL GLY GLN GLU GLN LYS HIS THR TYR LEU SEQRES 27 A 858 PRO LEU GLU VAL CYS ASN ILE VAL ALA GLY GLN ARG CYS SEQRES 28 A 858 ILE LYS LYS LEU THR ASP ASN GLN THR SER THR MET ILE SEQRES 29 A 858 LYS ALA THR ALA ARG SER ALA PRO ASP ARG GLN GLU GLU SEQRES 30 A 858 ILE SER ARG LEU MET LYS ASN ALA SER TYR ASN LEU ASP SEQRES 31 A 858 PRO TYR ILE GLN GLU PHE GLY ILE LYS VAL LYS ASP ASP SEQRES 32 A 858 MET THR GLU VAL THR GLY ARG VAL LEU PRO ALA PRO ILE SEQRES 33 A 858 LEU GLN TYR GLY GLY ARG ASN ARG ALA ILE ALA THR PRO SEQRES 34 A 858 ASN GLN GLY VAL TRP ASP MET ARG GLY LYS GLN PHE TYR SEQRES 35 A 858 ASN GLY ILE GLU ILE LYS VAL TRP ALA ILE ALA CYS PHE SEQRES 36 A 858 ALA PRO GLN LYS GLN CYS ARG GLU GLU VAL LEU LYS ASN SEQRES 37 A 858 PHE THR ASP GLN LEU ARG LYS ILE SER LYS ASP ALA GLY SEQRES 38 A 858 MET PRO ILE GLN GLY GLN PRO CYS PHE CYS LYS TYR ALA SEQRES 39 A 858 GLN GLY ALA ASP SER VAL GLU PRO MET PHE ARG HIS LEU SEQRES 40 A 858 LYS ASN THR TYR SER GLY LEU GLN LEU ILE ILE VAL ILE SEQRES 41 A 858 LEU PRO GLY LYS THR PRO VAL TYR ALA GLU VAL LYS ARG SEQRES 42 A 858 VAL GLY ASP THR LEU LEU GLY MET ALA THR GLN CYS VAL SEQRES 43 A 858 GLN VAL LYS ASN VAL VAL LYS THR SER PRO GLN THR LEU SEQRES 44 A 858 SER ASN LEU CYS LEU LYS ILE ASN VAL LYS LEU GLY GLY SEQRES 45 A 858 ILE ASN ASN ILE LEU VAL PRO HIS GLN ARG SER ALA VAL SEQRES 46 A 858 PHE GLN GLN PRO VAL ILE PHE LEU GLY ALA ASP VAL THR SEQRES 47 A 858 HIS PRO PRO ALA GLY ASP GLY LYS LYS PRO SER ILE THR SEQRES 48 A 858 ALA VAL VAL GLY SER MET ASP ALA HIS PRO SER ARG TYR SEQRES 49 A 858 CYS ALA THR VAL ARG VAL GLN ARG PRO ARG GLN GLU ILE SEQRES 50 A 858 ILE GLU ASP LEU SER TYR MET VAL ARG GLU LEU LEU ILE SEQRES 51 A 858 GLN PHE TYR LYS SER THR ARG PHE LYS PRO THR ARG ILE SEQRES 52 A 858 ILE PHE TYR ARG ASP GLY VAL PRO GLU GLY GLN LEU PRO SEQRES 53 A 858 GLN ILE LEU HIS TYR GLU LEU LEU ALA ILE ARG ASP ALA SEQRES 54 A 858 CYS ILE LYS LEU GLU LYS ASP TYR GLN PRO GLY ILE THR SEQRES 55 A 858 TYR ILE VAL VAL GLN LYS ARG HIS HIS THR ARG LEU PHE SEQRES 56 A 858 CYS ALA ASP LYS ASN GLU ARG ILE GLY LYS SER GLY ASN SEQRES 57 A 858 ILE PRO ALA GLY THR THR VAL ASP THR ASN ILE THR HIS SEQRES 58 A 858 PRO PHE GLU PHE ASP PHE TYR LEU CYS SER HIS ALA GLY SEQRES 59 A 858 ILE GLN GLY THR SER ARG PRO SER HIS TYR TYR VAL LEU SEQRES 60 A 858 TRP ASP ASP ASN ARG PHE THR ALA ASP GLU LEU GLN ILE SEQRES 61 A 858 LEU THR TYR GLN LEU CYS HIS THR TYR VAL ARG CYS THR SEQRES 62 A 858 ARG SER VAL SER ILE PRO ALA PRO ALA TYR TYR ALA ARG SEQRES 63 A 858 LEU VAL ALA PHE ARG ALA ARG TYR HIS LEU VAL ASP LYS SEQRES 64 A 858 GLU HIS ASP SER GLY GLU GLY SER HIS ILE SER GLY GLN SEQRES 65 A 858 SER ASN GLY ARG ASP PRO GLN ALA LEU ALA LYS ALA VAL SEQRES 66 A 858 GLN VAL HIS GLN ASP THR LEU ARG THR MET TYR PHE ALA SEQRES 1 R 20 A A U A U U A A A A A A A SEQRES 2 R 20 A A A A A A A FORMUL 3 HOH *470(H2 O) HELIX 1 1 PRO A 65 PHE A 80 1 16 HELIX 2 2 LYS A 81 LYS A 81 5 1 HELIX 3 3 ILE A 84 GLY A 86 5 3 HELIX 4 4 TRP A 138 GLY A 148 1 11 HELIX 5 5 PRO A 153 TYR A 172 1 20 HELIX 6 6 PRO A 227 ASP A 237 1 11 HELIX 7 7 THR A 249 LYS A 261 1 13 HELIX 8 8 VAL A 306 ASN A 315 1 10 HELIX 9 9 THR A 355 ALA A 367 1 13 HELIX 10 10 SER A 369 SER A 385 1 17 HELIX 11 11 TYR A 386 LEU A 388 5 3 HELIX 12 12 ASP A 389 PHE A 395 1 7 HELIX 13 13 ARG A 461 ALA A 479 1 19 HELIX 14 14 GLY A 495 ASP A 497 5 3 HELIX 15 15 SER A 498 TYR A 510 1 13 HELIX 16 16 PRO A 525 THR A 536 1 12 HELIX 17 17 VAL A 547 LYS A 552 1 6 HELIX 18 18 SER A 554 LEU A 569 1 16 HELIX 19 19 PRO A 578 ARG A 581 5 4 HELIX 20 20 SER A 582 GLN A 587 5 6 HELIX 21 21 ASP A 639 ARG A 656 1 18 HELIX 22 22 GLN A 673 GLU A 693 1 21 HELIX 23 23 ASP A 717 ARG A 721 5 5 HELIX 24 24 THR A 773 CYS A 785 1 13 HELIX 25 25 PRO A 798 LEU A 815 1 18 HELIX 26 26 ASP A 836 VAL A 844 1 9 HELIX 27 27 HIS A 847 ARG A 852 1 6 SHEET 1 A11 TYR A 623 GLN A 630 0 SHEET 2 A11 SER A 608 SER A 615 -1 N SER A 608 O GLN A 630 SHEET 3 A11 VAL A 589 THR A 597 -1 N THR A 597 O ILE A 609 SHEET 4 A11 ARG A 661 ARG A 666 1 O ILE A 663 N LEU A 592 SHEET 5 A11 GLY A 699 GLN A 706 1 O ILE A 703 N PHE A 664 SHEET 6 A11 SER A 761 ASP A 768 -1 O HIS A 762 N GLN A 706 SHEET 7 A11 ASP A 745 CYS A 749 -1 N PHE A 746 O TYR A 763 SHEET 8 A11 THR A 732 VAL A 734 -1 N THR A 732 O CYS A 749 SHEET 9 A11 THR A 404 VAL A 410 -1 N ARG A 409 O THR A 733 SHEET 10 A11 LYS A 34 ALA A 40 -1 N LYS A 34 O VAL A 410 SHEET 11 A11 LEU A 713 CYS A 715 -1 O PHE A 714 N LEU A 39 SHEET 1 B 4 THR A 173 VAL A 175 0 SHEET 2 B 4 SER A 178 PHE A 180 -1 O PHE A 180 N THR A 173 SHEET 3 B 4 ARG A 194 PRO A 206 -1 O PHE A 200 N PHE A 179 SHEET 4 B 4 PRO A 189 GLY A 191 -1 N LEU A 190 O ARG A 194 SHEET 1 C 6 THR A 173 VAL A 175 0 SHEET 2 C 6 SER A 178 PHE A 180 -1 O PHE A 180 N THR A 173 SHEET 3 C 6 ARG A 194 PRO A 206 -1 O PHE A 200 N PHE A 179 SHEET 4 C 6 MET A 211 TYR A 223 -1 O ASN A 214 N SER A 203 SHEET 5 C 6 TYR A 42 ASP A 46 -1 N VAL A 45 O MET A 211 SHEET 6 C 6 LYS A 398 VAL A 399 -1 O LYS A 398 N ASP A 46 SHEET 1 D 5 VAL A 91 TYR A 92 0 SHEET 2 D 5 ASN A 97 THR A 100 -1 O TYR A 99 N VAL A 91 SHEET 3 D 5 ASP A 51 LYS A 60 -1 N TYR A 55 O ILE A 98 SHEET 4 D 5 PHE A 126 SER A 137 -1 O LYS A 127 N LYS A 60 SHEET 5 D 5 ARG A 110 GLU A 114 -1 N ASP A 112 O VAL A 128 SHEET 1 E 5 THR A 335 PRO A 338 0 SHEET 2 E 5 PRO A 324 VAL A 328 -1 N LEU A 326 O LEU A 337 SHEET 3 E 5 LYS A 276 PRO A 286 -1 N CYS A 280 O GLN A 327 SHEET 4 E 5 LYS A 264 VAL A 267 -1 N VAL A 265 O TYR A 277 SHEET 5 E 5 CYS A 342 ILE A 344 -1 O ASN A 343 N GLU A 266 SHEET 1 F 2 THR A 291 GLN A 295 0 SHEET 2 F 2 THR A 301 THR A 305 -1 O VAL A 302 N LEU A 294 SHEET 1 G 3 ILE A 425 ALA A 426 0 SHEET 2 G 3 LEU A 416 GLN A 417 -1 N LEU A 416 O ALA A 426 SHEET 3 G 3 ILE A 575 LEU A 576 -1 O ILE A 575 N GLN A 417 SHEET 1 H 4 PHE A 489 TYR A 492 0 SHEET 2 H 4 TRP A 449 CYS A 453 1 N CYS A 453 O LYS A 491 SHEET 3 H 4 LEU A 515 LEU A 520 1 O ILE A 517 N ALA A 452 SHEET 4 H 4 THR A 542 GLN A 546 1 O GLN A 543 N VAL A 518 CISPEP 1 LYS A 60 PRO A 61 0 4.83 CISPEP 2 HIS A 619 PRO A 620 0 -10.24 CRYST1 70.470 98.630 73.210 90.00 110.96 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014190 0.000000 0.005435 0.00000 SCALE2 0.000000 0.010139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014627 0.00000