data_4L8M # _entry.id 4L8M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L8M pdb_00004l8m 10.2210/pdb4l8m/pdb RCSB RCSB080318 ? ? WWPDB D_1000080318 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3QUD . unspecified PDB 3QUE . unspecified # _pdbx_database_status.entry_id 4L8M _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Richters, A.' 1 'Mayer-Wrangowski, S.C.' 2 'Gruetter, C.' 3 'Rauh, D.' 4 # _citation.id primary _citation.title ;Metabolically Stable Dibenzo[b,e]oxepin-11(6H)-ones as Highly Selective p38 MAP Kinase Inhibitors: Optimizing Anti-Cytokine Activity in Human Whole Blood. ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 56 _citation.page_first 8561 _citation.page_last 8578 _citation.year 2013 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24131218 _citation.pdbx_database_id_DOI 10.1021/jm401276h # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Baur, B.' 1 ? primary 'Storch, K.' 2 ? primary 'Martz, K.E.' 3 ? primary 'Goettert, M.I.' 4 ? primary 'Richters, A.' 5 ? primary 'Rauh, D.' 6 ? primary 'Laufer, S.A.' 7 ? # _cell.length_a 64.616 _cell.length_b 72.949 _cell.length_c 76.916 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4L8M _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4L8M _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mitogen-activated protein kinase 14' 41269.055 1 2.7.11.24 ? 'p38 MAP Kinase' ? 2 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ? 3 non-polymer syn 'N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide' 567.607 1 ? ? ? ? 4 water nat water 18.015 43 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;MAP kinase 14, MAPK 14, Cytokine suppressive anti-inflammatory drug-binding protein, CSAID-binding protein, CSBP, MAP kinase MXI2, MAX-interacting protein 2, Mitogen-activated protein kinase p38 alpha, MAP kinase p38 alpha, Stress-activated protein kinase 2a, SAPK2a ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA DPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES ; _entity_poly.pdbx_seq_one_letter_code_can ;GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA DPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 GLU n 1 5 ARG n 1 6 PRO n 1 7 THR n 1 8 PHE n 1 9 TYR n 1 10 ARG n 1 11 GLN n 1 12 GLU n 1 13 LEU n 1 14 ASN n 1 15 LYS n 1 16 THR n 1 17 ILE n 1 18 TRP n 1 19 GLU n 1 20 VAL n 1 21 PRO n 1 22 GLU n 1 23 ARG n 1 24 TYR n 1 25 GLN n 1 26 ASN n 1 27 LEU n 1 28 SER n 1 29 PRO n 1 30 VAL n 1 31 GLY n 1 32 SER n 1 33 GLY n 1 34 ALA n 1 35 TYR n 1 36 GLY n 1 37 SER n 1 38 VAL n 1 39 CYS n 1 40 ALA n 1 41 ALA n 1 42 PHE n 1 43 ASP n 1 44 THR n 1 45 LYS n 1 46 THR n 1 47 GLY n 1 48 LEU n 1 49 ARG n 1 50 VAL n 1 51 ALA n 1 52 VAL n 1 53 LYS n 1 54 LYS n 1 55 LEU n 1 56 SER n 1 57 ARG n 1 58 PRO n 1 59 PHE n 1 60 GLN n 1 61 SER n 1 62 ILE n 1 63 ILE n 1 64 HIS n 1 65 ALA n 1 66 LYS n 1 67 ARG n 1 68 THR n 1 69 TYR n 1 70 ARG n 1 71 GLU n 1 72 LEU n 1 73 ARG n 1 74 LEU n 1 75 LEU n 1 76 LYS n 1 77 HIS n 1 78 MET n 1 79 LYS n 1 80 HIS n 1 81 GLU n 1 82 ASN n 1 83 VAL n 1 84 ILE n 1 85 GLY n 1 86 LEU n 1 87 LEU n 1 88 ASP n 1 89 VAL n 1 90 PHE n 1 91 THR n 1 92 PRO n 1 93 ALA n 1 94 ARG n 1 95 SER n 1 96 LEU n 1 97 GLU n 1 98 GLU n 1 99 PHE n 1 100 ASN n 1 101 ASP n 1 102 VAL n 1 103 TYR n 1 104 LEU n 1 105 VAL n 1 106 THR n 1 107 HIS n 1 108 LEU n 1 109 MET n 1 110 GLY n 1 111 ALA n 1 112 ASP n 1 113 LEU n 1 114 ASN n 1 115 ASN n 1 116 ILE n 1 117 VAL n 1 118 LYS n 1 119 CYS n 1 120 GLN n 1 121 LYS n 1 122 LEU n 1 123 THR n 1 124 ASP n 1 125 ASP n 1 126 HIS n 1 127 VAL n 1 128 GLN n 1 129 PHE n 1 130 LEU n 1 131 ILE n 1 132 TYR n 1 133 GLN n 1 134 ILE n 1 135 LEU n 1 136 ARG n 1 137 GLY n 1 138 LEU n 1 139 LYS n 1 140 TYR n 1 141 ILE n 1 142 HIS n 1 143 SER n 1 144 ALA n 1 145 ASP n 1 146 ILE n 1 147 ILE n 1 148 HIS n 1 149 ARG n 1 150 ASP n 1 151 LEU n 1 152 LYS n 1 153 PRO n 1 154 SER n 1 155 ASN n 1 156 LEU n 1 157 ALA n 1 158 VAL n 1 159 ASN n 1 160 GLU n 1 161 ASP n 1 162 CYS n 1 163 GLU n 1 164 LEU n 1 165 LYS n 1 166 ILE n 1 167 LEU n 1 168 ASP n 1 169 PHE n 1 170 GLY n 1 171 LEU n 1 172 ALA n 1 173 ARG n 1 174 HIS n 1 175 THR n 1 176 ASP n 1 177 ASP n 1 178 GLU n 1 179 MET n 1 180 THR n 1 181 GLY n 1 182 TYR n 1 183 VAL n 1 184 ALA n 1 185 THR n 1 186 ARG n 1 187 TRP n 1 188 TYR n 1 189 ARG n 1 190 ALA n 1 191 PRO n 1 192 GLU n 1 193 ILE n 1 194 MET n 1 195 LEU n 1 196 ASN n 1 197 TRP n 1 198 MET n 1 199 HIS n 1 200 TYR n 1 201 ASN n 1 202 GLN n 1 203 THR n 1 204 VAL n 1 205 ASP n 1 206 ILE n 1 207 TRP n 1 208 SER n 1 209 VAL n 1 210 GLY n 1 211 CYS n 1 212 ILE n 1 213 MET n 1 214 ALA n 1 215 GLU n 1 216 LEU n 1 217 LEU n 1 218 THR n 1 219 GLY n 1 220 ARG n 1 221 THR n 1 222 LEU n 1 223 PHE n 1 224 PRO n 1 225 GLY n 1 226 THR n 1 227 ASP n 1 228 HIS n 1 229 ILE n 1 230 ASP n 1 231 GLN n 1 232 LEU n 1 233 LYS n 1 234 LEU n 1 235 ILE n 1 236 LEU n 1 237 ARG n 1 238 LEU n 1 239 VAL n 1 240 GLY n 1 241 THR n 1 242 PRO n 1 243 GLY n 1 244 ALA n 1 245 GLU n 1 246 LEU n 1 247 LEU n 1 248 LYS n 1 249 LYS n 1 250 ILE n 1 251 SER n 1 252 SER n 1 253 GLU n 1 254 SER n 1 255 ALA n 1 256 ARG n 1 257 ASN n 1 258 TYR n 1 259 ILE n 1 260 GLN n 1 261 SER n 1 262 LEU n 1 263 THR n 1 264 GLN n 1 265 MET n 1 266 PRO n 1 267 LYS n 1 268 MET n 1 269 ASN n 1 270 PHE n 1 271 ALA n 1 272 ASN n 1 273 VAL n 1 274 PHE n 1 275 ILE n 1 276 GLY n 1 277 ALA n 1 278 ASN n 1 279 PRO n 1 280 LEU n 1 281 ALA n 1 282 VAL n 1 283 ASP n 1 284 LEU n 1 285 LEU n 1 286 GLU n 1 287 LYS n 1 288 MET n 1 289 LEU n 1 290 VAL n 1 291 LEU n 1 292 ASP n 1 293 SER n 1 294 ASP n 1 295 LYS n 1 296 ARG n 1 297 ILE n 1 298 THR n 1 299 ALA n 1 300 ALA n 1 301 GLN n 1 302 ALA n 1 303 LEU n 1 304 ALA n 1 305 HIS n 1 306 ALA n 1 307 TYR n 1 308 PHE n 1 309 ALA n 1 310 GLN n 1 311 TYR n 1 312 HIS n 1 313 ASP n 1 314 PRO n 1 315 ASP n 1 316 ASP n 1 317 GLU n 1 318 PRO n 1 319 VAL n 1 320 ALA n 1 321 ASP n 1 322 PRO n 1 323 TYR n 1 324 ASP n 1 325 GLN n 1 326 SER n 1 327 PHE n 1 328 GLU n 1 329 SER n 1 330 ARG n 1 331 ASP n 1 332 LEU n 1 333 LEU n 1 334 ILE n 1 335 ASP n 1 336 GLU n 1 337 TRP n 1 338 LYS n 1 339 SER n 1 340 LEU n 1 341 THR n 1 342 TYR n 1 343 ASP n 1 344 GLU n 1 345 VAL n 1 346 ILE n 1 347 SER n 1 348 PHE n 1 349 VAL n 1 350 PRO n 1 351 PRO n 1 352 PRO n 1 353 LEU n 1 354 ASP n 1 355 GLN n 1 356 GLU n 1 357 GLU n 1 358 MET n 1 359 GLU n 1 360 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MAPK14, CSBP, CSBP1, CSBP2, CSPB1, MXI2, SAPK2A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pGEX 6P-1' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MK14_HUMAN _struct_ref.pdbx_db_accession Q16539 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4L8M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 360 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q16539 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 360 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 360 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4L8M _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q16539 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F46 non-polymer . 'N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide' ? 'C33 H30 F N3 O5' 567.607 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4L8M _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.1 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '100 mM MES, 22% PEG4000, 50 mM n-BOG, pH 6.1, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-02-14 _diffrn_detector.details 'Dynamic bendable mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978600 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978600 _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA # _reflns.entry_id 4L8M _reflns.d_resolution_high 2.100 _reflns.number_obs 21490 _reflns.pdbx_Rmerge_I_obs 0.029 _reflns.pdbx_netI_over_sigmaI 25.810 _reflns.percent_possible_obs 98.400 _reflns.B_iso_Wilson_estimate 49.781 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.37 _reflns.number_all 21839 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 4.22 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.100 2.200 11645 ? 2728 0.306 5.170 ? ? 4.27 ? 2792 97.700 1 1 2.200 2.300 10233 ? 2285 0.211 7.530 ? ? ? ? ? 97.700 2 1 2.300 2.400 8648 ? 1936 0.149 10.610 ? ? ? ? ? 98.800 3 1 2.400 2.500 7251 ? 1650 0.113 13.360 ? ? ? ? ? 98.900 4 1 2.500 2.600 5976 ? 1393 0.084 16.740 ? ? ? ? ? 98.700 5 1 2.600 3.000 16297 ? 3939 0.050 23.880 ? ? ? ? ? 99.000 6 1 3.000 3.620 13333 ? 3201 0.030 37.820 ? ? ? ? ? 98.400 7 1 3.620 4.420 7369 ? 1914 0.022 48.320 ? ? ? ? ? 98.200 8 1 4.420 6.200 6460 ? 1525 0.020 59.610 ? ? ? ? ? 98.500 9 1 6.200 8.000 1743 ? 474 0.018 57.670 ? ? ? ? ? 98.100 10 1 8.000 12.000 1202 ? 300 0.015 73.710 ? ? ? ? ? 96.800 11 1 12.000 16.000 321 ? 82 0.015 70.000 ? ? ? ? ? 100.000 12 1 16.000 48.37 208 ? 63 0.020 59.670 ? ? ? ? ? 95.500 13 1 # _refine.entry_id 4L8M _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 48.3700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.4000 _refine.ls_number_reflns_obs 21489 _refine.ls_number_reflns_all 21839 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all 0.2288 _refine.ls_R_factor_obs 0.2234 _refine.ls_R_factor_R_work 0.2211 _refine.ls_wR_factor_R_work 0.2288 _refine.ls_R_factor_R_free 0.2794 _refine.ls_wR_factor_R_free 0.2904 _refine.ls_percent_reflns_R_free 4.0000 _refine.ls_number_reflns_R_free 860 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 49.0157 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.3800 _refine.aniso_B[2][2] -0.9200 _refine.aniso_B[3][3] 0.5400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9510 _refine.correlation_coeff_Fo_to_Fc_free 0.9300 _refine.overall_SU_R_Cruickshank_DPI 0.2650 _refine.overall_SU_R_free 0.2230 _refine.pdbx_overall_ESU_R 0.2650 _refine.pdbx_overall_ESU_R_Free 0.2230 _refine.overall_SU_ML 0.1810 _refine.overall_SU_B 6.9850 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdb entry 3QUD' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7715 _refine.B_iso_max 130.240 _refine.B_iso_min 20.200 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2725 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 82 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 2850 _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 48.3700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2897 0.012 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3935 1.488 1.997 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 342 6.230 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 133 36.111 23.835 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 486 18.146 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19 19.977 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 441 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2167 0.007 0.021 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.1000 _refine_ls_shell.d_res_low 2.1550 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.6900 _refine_ls_shell.number_reflns_R_work 1379 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3050 _refine_ls_shell.R_factor_R_free 0.4000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 57 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1436 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4L8M _struct.title 'Human p38 MAP kinase in complex with a Dibenzoxepinone' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L8M _struct_keywords.pdbx_keywords 'transferase/transferase inhibitor' _struct_keywords.text ;protein kinase, selective p38 inhibitor, SAR, Dibenzoxepinone derivative, Dibenzoxepinone, transferase-transferase inhibitor complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 61 ? MET A 78 ? SER A 61 MET A 78 1 ? 18 HELX_P HELX_P2 2 SER A 95 ? PHE A 99 ? SER A 95 PHE A 99 5 ? 5 HELX_P HELX_P3 3 ASN A 114 ? ILE A 116 ? ASN A 114 ILE A 116 5 ? 3 HELX_P HELX_P4 4 THR A 123 ? ALA A 144 ? THR A 123 ALA A 144 1 ? 22 HELX_P HELX_P5 5 LYS A 152 ? SER A 154 ? LYS A 152 SER A 154 5 ? 3 HELX_P HELX_P6 6 THR A 185 ? ARG A 189 ? THR A 185 ARG A 189 5 ? 5 HELX_P HELX_P7 7 ALA A 190 ? LEU A 195 ? ALA A 190 LEU A 195 1 ? 6 HELX_P HELX_P8 8 THR A 203 ? GLY A 219 ? THR A 203 GLY A 219 1 ? 17 HELX_P HELX_P9 9 ASP A 227 ? GLY A 240 ? ASP A 227 GLY A 240 1 ? 14 HELX_P HELX_P10 10 GLY A 243 ? LYS A 248 ? GLY A 243 LYS A 248 1 ? 6 HELX_P HELX_P11 11 SER A 252 ? GLN A 260 ? SER A 252 GLN A 260 1 ? 9 HELX_P HELX_P12 12 ASN A 269 ? PHE A 274 ? ASN A 269 PHE A 274 1 ? 6 HELX_P HELX_P13 13 ASN A 278 ? LEU A 289 ? ASN A 278 LEU A 289 1 ? 12 HELX_P HELX_P14 14 ASP A 292 ? ARG A 296 ? ASP A 292 ARG A 296 5 ? 5 HELX_P HELX_P15 15 THR A 298 ? HIS A 305 ? THR A 298 HIS A 305 1 ? 8 HELX_P HELX_P16 16 ALA A 306 ? ALA A 309 ? ALA A 306 ALA A 309 5 ? 4 HELX_P HELX_P17 17 GLN A 325 ? ARG A 330 ? GLN A 325 ARG A 330 5 ? 6 HELX_P HELX_P18 18 LEU A 333 ? SER A 347 ? LEU A 333 SER A 347 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 6 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 8 ? TYR A 9 ? PHE A 8 TYR A 9 A 2 VAL A 20 ? PRO A 21 ? VAL A 20 PRO A 21 B 1 GLU A 12 ? LEU A 13 ? GLU A 12 LEU A 13 B 2 THR A 16 ? ILE A 17 ? THR A 16 ILE A 17 C 1 ASP A 88 ? PHE A 90 ? ASP A 88 PHE A 90 C 2 TYR A 103 ? HIS A 107 ? TYR A 103 HIS A 107 C 3 ARG A 49 ? LEU A 55 ? ARG A 49 LEU A 55 C 4 GLY A 36 ? ASP A 43 ? GLY A 36 ASP A 43 C 5 TYR A 24 ? GLY A 33 ? TYR A 24 GLY A 33 C 6 ARG A 173 ? HIS A 174 ? ARG A 173 HIS A 174 D 1 ALA A 111 ? ASP A 112 ? ALA A 111 ASP A 112 D 2 LEU A 156 ? VAL A 158 ? LEU A 156 VAL A 158 D 3 LEU A 164 ? ILE A 166 ? LEU A 164 ILE A 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 9 ? N TYR A 9 O VAL A 20 ? O VAL A 20 B 1 2 N LEU A 13 ? N LEU A 13 O THR A 16 ? O THR A 16 C 1 2 N ASP A 88 ? N ASP A 88 O VAL A 105 ? O VAL A 105 C 2 3 O LEU A 104 ? O LEU A 104 N LYS A 53 ? N LYS A 53 C 3 4 O VAL A 52 ? O VAL A 52 N CYS A 39 ? N CYS A 39 C 4 5 O ALA A 40 ? O ALA A 40 N SER A 28 ? N SER A 28 C 5 6 N SER A 32 ? N SER A 32 O ARG A 173 ? O ARG A 173 D 1 2 N ALA A 111 ? N ALA A 111 O VAL A 158 ? O VAL A 158 D 2 3 N ALA A 157 ? N ALA A 157 O LYS A 165 ? O LYS A 165 # _atom_sites.entry_id 4L8M _atom_sites.fract_transf_matrix[1][1] 0.015476 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013708 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013001 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 MET 78 78 78 MET MET A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 CYS 119 119 ? ? ? A . n A 1 120 GLN 120 120 ? ? ? A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 ASP 125 125 125 ASP ASP A . n A 1 126 HIS 126 126 126 HIS HIS A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 HIS 142 142 142 HIS HIS A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 CYS 162 162 162 CYS CYS A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 HIS 174 174 174 HIS HIS A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 ASP 176 176 ? ? ? A . n A 1 177 ASP 177 177 ? ? ? A . n A 1 178 GLU 178 178 ? ? ? A . n A 1 179 MET 179 179 ? ? ? A . n A 1 180 THR 180 180 ? ? ? A . n A 1 181 GLY 181 181 ? ? ? A . n A 1 182 TYR 182 182 ? ? ? A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 TRP 187 187 187 TRP TRP A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 MET 194 194 194 MET MET A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 TRP 197 197 197 TRP TRP A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 HIS 199 199 199 HIS HIS A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 ASN 201 201 201 ASN ASN A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 TRP 207 207 207 TRP TRP A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 CYS 211 211 211 CYS CYS A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 MET 213 213 213 MET MET A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 GLN 231 231 231 GLN GLN A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 ILE 250 250 250 ILE ILE A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 SER 252 252 252 SER SER A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 SER 261 261 261 SER SER A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 MET 265 265 265 MET MET A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 MET 268 268 268 MET MET A . n A 1 269 ASN 269 269 269 ASN ASN A . n A 1 270 PHE 270 270 270 PHE PHE A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 ASN 272 272 272 ASN ASN A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 PHE 274 274 274 PHE PHE A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 ASP 283 283 283 ASP ASP A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 GLU 286 286 286 GLU GLU A . n A 1 287 LYS 287 287 287 LYS LYS A . n A 1 288 MET 288 288 288 MET MET A . n A 1 289 LEU 289 289 289 LEU LEU A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 LEU 291 291 291 LEU LEU A . n A 1 292 ASP 292 292 292 ASP ASP A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 ARG 296 296 296 ARG ARG A . n A 1 297 ILE 297 297 297 ILE ILE A . n A 1 298 THR 298 298 298 THR THR A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 GLN 301 301 301 GLN GLN A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 ALA 304 304 304 ALA ALA A . n A 1 305 HIS 305 305 305 HIS HIS A . n A 1 306 ALA 306 306 306 ALA ALA A . n A 1 307 TYR 307 307 307 TYR TYR A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 GLN 310 310 310 GLN GLN A . n A 1 311 TYR 311 311 311 TYR TYR A . n A 1 312 HIS 312 312 312 HIS HIS A . n A 1 313 ASP 313 313 313 ASP ASP A . n A 1 314 PRO 314 314 314 PRO PRO A . n A 1 315 ASP 315 315 315 ASP ASP A . n A 1 316 ASP 316 316 316 ASP ASP A . n A 1 317 GLU 317 317 317 GLU GLU A . n A 1 318 PRO 318 318 318 PRO PRO A . n A 1 319 VAL 319 319 319 VAL VAL A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 PRO 322 322 322 PRO PRO A . n A 1 323 TYR 323 323 323 TYR TYR A . n A 1 324 ASP 324 324 324 ASP ASP A . n A 1 325 GLN 325 325 325 GLN GLN A . n A 1 326 SER 326 326 326 SER SER A . n A 1 327 PHE 327 327 327 PHE PHE A . n A 1 328 GLU 328 328 328 GLU GLU A . n A 1 329 SER 329 329 329 SER SER A . n A 1 330 ARG 330 330 330 ARG ARG A . n A 1 331 ASP 331 331 331 ASP ASP A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 ILE 334 334 334 ILE ILE A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 GLU 336 336 336 GLU GLU A . n A 1 337 TRP 337 337 337 TRP TRP A . n A 1 338 LYS 338 338 338 LYS LYS A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 LEU 340 340 340 LEU LEU A . n A 1 341 THR 341 341 341 THR THR A . n A 1 342 TYR 342 342 342 TYR TYR A . n A 1 343 ASP 343 343 343 ASP ASP A . n A 1 344 GLU 344 344 344 GLU GLU A . n A 1 345 VAL 345 345 345 VAL VAL A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 SER 347 347 347 SER SER A . n A 1 348 PHE 348 348 348 PHE PHE A . n A 1 349 VAL 349 349 349 VAL VAL A . n A 1 350 PRO 350 350 350 PRO PRO A . n A 1 351 PRO 351 351 351 PRO PRO A . n A 1 352 PRO 352 352 352 PRO PRO A . n A 1 353 LEU 353 353 ? ? ? A . n A 1 354 ASP 354 354 ? ? ? A . n A 1 355 GLN 355 355 ? ? ? A . n A 1 356 GLU 356 356 ? ? ? A . n A 1 357 GLU 357 357 ? ? ? A . n A 1 358 MET 358 358 ? ? ? A . n A 1 359 GLU 359 359 ? ? ? A . n A 1 360 SER 360 360 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG 1 401 1000 BOG BOG A . C 2 BOG 1 402 1000 BOG BOG A . D 3 F46 1 403 1 F46 DRG A . E 4 HOH 1 501 1 HOH HOH A . E 4 HOH 2 502 2 HOH HOH A . E 4 HOH 3 503 3 HOH HOH A . E 4 HOH 4 504 4 HOH HOH A . E 4 HOH 5 505 5 HOH HOH A . E 4 HOH 6 506 6 HOH HOH A . E 4 HOH 7 507 7 HOH HOH A . E 4 HOH 8 508 8 HOH HOH A . E 4 HOH 9 509 9 HOH HOH A . E 4 HOH 10 510 10 HOH HOH A . E 4 HOH 11 511 11 HOH HOH A . E 4 HOH 12 512 12 HOH HOH A . E 4 HOH 13 513 13 HOH HOH A . E 4 HOH 14 514 14 HOH HOH A . E 4 HOH 15 515 15 HOH HOH A . E 4 HOH 16 516 16 HOH HOH A . E 4 HOH 17 517 17 HOH HOH A . E 4 HOH 18 518 18 HOH HOH A . E 4 HOH 19 519 19 HOH HOH A . E 4 HOH 20 520 20 HOH HOH A . E 4 HOH 21 521 21 HOH HOH A . E 4 HOH 22 522 22 HOH HOH A . E 4 HOH 23 523 23 HOH HOH A . E 4 HOH 24 524 25 HOH HOH A . E 4 HOH 25 525 26 HOH HOH A . E 4 HOH 26 526 27 HOH HOH A . E 4 HOH 27 527 28 HOH HOH A . E 4 HOH 28 528 29 HOH HOH A . E 4 HOH 29 529 30 HOH HOH A . E 4 HOH 30 530 31 HOH HOH A . E 4 HOH 31 531 32 HOH HOH A . E 4 HOH 32 532 34 HOH HOH A . E 4 HOH 33 533 35 HOH HOH A . E 4 HOH 34 534 36 HOH HOH A . E 4 HOH 35 535 38 HOH HOH A . E 4 HOH 36 536 39 HOH HOH A . E 4 HOH 37 537 40 HOH HOH A . E 4 HOH 38 538 41 HOH HOH A . E 4 HOH 39 539 42 HOH HOH A . E 4 HOH 40 540 43 HOH HOH A . E 4 HOH 41 541 44 HOH HOH A . E 4 HOH 42 542 45 HOH HOH A . E 4 HOH 43 543 46 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-30 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.mon_nstd_flag' 2 3 'Structure model' '_chem_comp.name' 3 3 'Structure model' '_chem_comp.type' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_chem_comp.pdbx_synonyms' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 4L8M _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 44.790 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.100 _pdbx_phasing_MR.d_res_low_rotation 40.950 _pdbx_phasing_MR.d_res_high_translation 2.100 _pdbx_phasing_MR.d_res_low_translation 40.950 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 132 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 317 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 11 ? ? -173.47 125.16 2 1 ASN A 14 ? ? 70.54 -125.64 3 1 ARG A 23 ? ? -30.71 -36.45 4 1 SER A 32 ? ? -167.03 -153.31 5 1 TYR A 35 ? ? 84.24 13.58 6 1 ALA A 93 ? ? -39.37 124.74 7 1 ARG A 149 ? ? 80.79 -19.29 8 1 LEU A 195 ? ? -69.54 12.66 9 1 MET A 198 ? ? -58.68 -70.41 10 1 PRO A 224 ? ? -84.10 39.76 11 1 PHE A 274 ? ? -100.76 52.16 12 1 LEU A 289 ? ? -101.12 46.16 13 1 PRO A 350 ? ? -44.88 155.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 117 ? CG1 ? A VAL 117 CG1 2 1 Y 1 A VAL 117 ? CG2 ? A VAL 117 CG2 3 1 Y 1 A LYS 118 ? CG ? A LYS 118 CG 4 1 Y 1 A LYS 118 ? CD ? A LYS 118 CD 5 1 Y 1 A LYS 118 ? CE ? A LYS 118 CE 6 1 Y 1 A LYS 118 ? NZ ? A LYS 118 NZ 7 1 Y 1 A ARG 173 ? CG ? A ARG 173 CG 8 1 Y 1 A ARG 173 ? CD ? A ARG 173 CD 9 1 Y 1 A ARG 173 ? NE ? A ARG 173 NE 10 1 Y 1 A ARG 173 ? CZ ? A ARG 173 CZ 11 1 Y 1 A ARG 173 ? NH1 ? A ARG 173 NH1 12 1 Y 1 A ARG 173 ? NH2 ? A ARG 173 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A GLU 4 ? A GLU 4 5 1 Y 1 A CYS 119 ? A CYS 119 6 1 Y 1 A GLN 120 ? A GLN 120 7 1 Y 1 A ASP 176 ? A ASP 176 8 1 Y 1 A ASP 177 ? A ASP 177 9 1 Y 1 A GLU 178 ? A GLU 178 10 1 Y 1 A MET 179 ? A MET 179 11 1 Y 1 A THR 180 ? A THR 180 12 1 Y 1 A GLY 181 ? A GLY 181 13 1 Y 1 A TYR 182 ? A TYR 182 14 1 Y 1 A LEU 353 ? A LEU 353 15 1 Y 1 A ASP 354 ? A ASP 354 16 1 Y 1 A GLN 355 ? A GLN 355 17 1 Y 1 A GLU 356 ? A GLU 356 18 1 Y 1 A GLU 357 ? A GLU 357 19 1 Y 1 A MET 358 ? A MET 358 20 1 Y 1 A GLU 359 ? A GLU 359 21 1 Y 1 A SER 360 ? A SER 360 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BOG C1 C N R 74 BOG O1 O N N 75 BOG C2 C N R 76 BOG O2 O N N 77 BOG C3 C N S 78 BOG O3 O N N 79 BOG C4 C N S 80 BOG O4 O N N 81 BOG C5 C N R 82 BOG O5 O N N 83 BOG C6 C N N 84 BOG O6 O N N 85 BOG "C1'" C N N 86 BOG "C2'" C N N 87 BOG "C3'" C N N 88 BOG "C4'" C N N 89 BOG "C5'" C N N 90 BOG "C6'" C N N 91 BOG "C7'" C N N 92 BOG "C8'" C N N 93 BOG H1 H N N 94 BOG H2 H N N 95 BOG HO2 H N N 96 BOG H3 H N N 97 BOG HO3 H N N 98 BOG H4 H N N 99 BOG HO4 H N N 100 BOG H5 H N N 101 BOG H61 H N N 102 BOG H62 H N N 103 BOG HO6 H N N 104 BOG "H1'1" H N N 105 BOG "H1'2" H N N 106 BOG "H2'1" H N N 107 BOG "H2'2" H N N 108 BOG "H3'1" H N N 109 BOG "H3'2" H N N 110 BOG "H4'1" H N N 111 BOG "H4'2" H N N 112 BOG "H5'1" H N N 113 BOG "H5'2" H N N 114 BOG "H6'1" H N N 115 BOG "H6'2" H N N 116 BOG "H7'1" H N N 117 BOG "H7'2" H N N 118 BOG "H8'1" H N N 119 BOG "H8'2" H N N 120 BOG "H8'3" H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 F46 OAA O N N 136 F46 OAB O N N 137 F46 FAC F N N 138 F46 CAD C Y N 139 F46 CAE C Y N 140 F46 CAF C Y N 141 F46 CAG C Y N 142 F46 CAH C Y N 143 F46 CAI C Y N 144 F46 CAJ C Y N 145 F46 CAK C Y N 146 F46 CAL C Y N 147 F46 CAM C Y N 148 F46 CAN C Y N 149 F46 CAO C Y N 150 F46 CAP C Y N 151 F46 CAQ C Y N 152 F46 CAR C N N 153 F46 CAS C N N 154 F46 CAT C N N 155 F46 CAU C N N 156 F46 CAV C N N 157 F46 CAW C N N 158 F46 CAX C N N 159 F46 NAY N N N 160 F46 NAZ N N N 161 F46 OBA O N N 162 F46 OBB O N N 163 F46 OBC O N N 164 F46 CBD C N N 165 F46 CBE C N N 166 F46 CBF C Y N 167 F46 CBG C Y N 168 F46 CBH C Y N 169 F46 CBI C Y N 170 F46 CBJ C Y N 171 F46 CBK C Y N 172 F46 CBL C Y N 173 F46 CBM C Y N 174 F46 CBN C Y N 175 F46 CBO C Y N 176 F46 NBP N N N 177 F46 HAD H N N 178 F46 HAE H N N 179 F46 HAF H N N 180 F46 HAG H N N 181 F46 HAH H N N 182 F46 HAI H N N 183 F46 HAJ H N N 184 F46 HAK H N N 185 F46 HAL H N N 186 F46 HAM H N N 187 F46 HAN H N N 188 F46 HAO H N N 189 F46 HAP H N N 190 F46 HAQ H N N 191 F46 HAR H N N 192 F46 HARA H N N 193 F46 HAS H N N 194 F46 HASA H N N 195 F46 HAT H N N 196 F46 HATA H N N 197 F46 HAU H N N 198 F46 HAUA H N N 199 F46 HAV H N N 200 F46 HAVA H N N 201 F46 HAW H N N 202 F46 HAWA H N N 203 F46 HAX H N N 204 F46 HAXA H N N 205 F46 HNAY H N N 206 F46 HNAZ H N N 207 GLN N N N N 208 GLN CA C N S 209 GLN C C N N 210 GLN O O N N 211 GLN CB C N N 212 GLN CG C N N 213 GLN CD C N N 214 GLN OE1 O N N 215 GLN NE2 N N N 216 GLN OXT O N N 217 GLN H H N N 218 GLN H2 H N N 219 GLN HA H N N 220 GLN HB2 H N N 221 GLN HB3 H N N 222 GLN HG2 H N N 223 GLN HG3 H N N 224 GLN HE21 H N N 225 GLN HE22 H N N 226 GLN HXT H N N 227 GLU N N N N 228 GLU CA C N S 229 GLU C C N N 230 GLU O O N N 231 GLU CB C N N 232 GLU CG C N N 233 GLU CD C N N 234 GLU OE1 O N N 235 GLU OE2 O N N 236 GLU OXT O N N 237 GLU H H N N 238 GLU H2 H N N 239 GLU HA H N N 240 GLU HB2 H N N 241 GLU HB3 H N N 242 GLU HG2 H N N 243 GLU HG3 H N N 244 GLU HE2 H N N 245 GLU HXT H N N 246 GLY N N N N 247 GLY CA C N N 248 GLY C C N N 249 GLY O O N N 250 GLY OXT O N N 251 GLY H H N N 252 GLY H2 H N N 253 GLY HA2 H N N 254 GLY HA3 H N N 255 GLY HXT H N N 256 HIS N N N N 257 HIS CA C N S 258 HIS C C N N 259 HIS O O N N 260 HIS CB C N N 261 HIS CG C Y N 262 HIS ND1 N Y N 263 HIS CD2 C Y N 264 HIS CE1 C Y N 265 HIS NE2 N Y N 266 HIS OXT O N N 267 HIS H H N N 268 HIS H2 H N N 269 HIS HA H N N 270 HIS HB2 H N N 271 HIS HB3 H N N 272 HIS HD1 H N N 273 HIS HD2 H N N 274 HIS HE1 H N N 275 HIS HE2 H N N 276 HIS HXT H N N 277 HOH O O N N 278 HOH H1 H N N 279 HOH H2 H N N 280 ILE N N N N 281 ILE CA C N S 282 ILE C C N N 283 ILE O O N N 284 ILE CB C N S 285 ILE CG1 C N N 286 ILE CG2 C N N 287 ILE CD1 C N N 288 ILE OXT O N N 289 ILE H H N N 290 ILE H2 H N N 291 ILE HA H N N 292 ILE HB H N N 293 ILE HG12 H N N 294 ILE HG13 H N N 295 ILE HG21 H N N 296 ILE HG22 H N N 297 ILE HG23 H N N 298 ILE HD11 H N N 299 ILE HD12 H N N 300 ILE HD13 H N N 301 ILE HXT H N N 302 LEU N N N N 303 LEU CA C N S 304 LEU C C N N 305 LEU O O N N 306 LEU CB C N N 307 LEU CG C N N 308 LEU CD1 C N N 309 LEU CD2 C N N 310 LEU OXT O N N 311 LEU H H N N 312 LEU H2 H N N 313 LEU HA H N N 314 LEU HB2 H N N 315 LEU HB3 H N N 316 LEU HG H N N 317 LEU HD11 H N N 318 LEU HD12 H N N 319 LEU HD13 H N N 320 LEU HD21 H N N 321 LEU HD22 H N N 322 LEU HD23 H N N 323 LEU HXT H N N 324 LYS N N N N 325 LYS CA C N S 326 LYS C C N N 327 LYS O O N N 328 LYS CB C N N 329 LYS CG C N N 330 LYS CD C N N 331 LYS CE C N N 332 LYS NZ N N N 333 LYS OXT O N N 334 LYS H H N N 335 LYS H2 H N N 336 LYS HA H N N 337 LYS HB2 H N N 338 LYS HB3 H N N 339 LYS HG2 H N N 340 LYS HG3 H N N 341 LYS HD2 H N N 342 LYS HD3 H N N 343 LYS HE2 H N N 344 LYS HE3 H N N 345 LYS HZ1 H N N 346 LYS HZ2 H N N 347 LYS HZ3 H N N 348 LYS HXT H N N 349 MET N N N N 350 MET CA C N S 351 MET C C N N 352 MET O O N N 353 MET CB C N N 354 MET CG C N N 355 MET SD S N N 356 MET CE C N N 357 MET OXT O N N 358 MET H H N N 359 MET H2 H N N 360 MET HA H N N 361 MET HB2 H N N 362 MET HB3 H N N 363 MET HG2 H N N 364 MET HG3 H N N 365 MET HE1 H N N 366 MET HE2 H N N 367 MET HE3 H N N 368 MET HXT H N N 369 PHE N N N N 370 PHE CA C N S 371 PHE C C N N 372 PHE O O N N 373 PHE CB C N N 374 PHE CG C Y N 375 PHE CD1 C Y N 376 PHE CD2 C Y N 377 PHE CE1 C Y N 378 PHE CE2 C Y N 379 PHE CZ C Y N 380 PHE OXT O N N 381 PHE H H N N 382 PHE H2 H N N 383 PHE HA H N N 384 PHE HB2 H N N 385 PHE HB3 H N N 386 PHE HD1 H N N 387 PHE HD2 H N N 388 PHE HE1 H N N 389 PHE HE2 H N N 390 PHE HZ H N N 391 PHE HXT H N N 392 PRO N N N N 393 PRO CA C N S 394 PRO C C N N 395 PRO O O N N 396 PRO CB C N N 397 PRO CG C N N 398 PRO CD C N N 399 PRO OXT O N N 400 PRO H H N N 401 PRO HA H N N 402 PRO HB2 H N N 403 PRO HB3 H N N 404 PRO HG2 H N N 405 PRO HG3 H N N 406 PRO HD2 H N N 407 PRO HD3 H N N 408 PRO HXT H N N 409 SER N N N N 410 SER CA C N S 411 SER C C N N 412 SER O O N N 413 SER CB C N N 414 SER OG O N N 415 SER OXT O N N 416 SER H H N N 417 SER H2 H N N 418 SER HA H N N 419 SER HB2 H N N 420 SER HB3 H N N 421 SER HG H N N 422 SER HXT H N N 423 THR N N N N 424 THR CA C N S 425 THR C C N N 426 THR O O N N 427 THR CB C N R 428 THR OG1 O N N 429 THR CG2 C N N 430 THR OXT O N N 431 THR H H N N 432 THR H2 H N N 433 THR HA H N N 434 THR HB H N N 435 THR HG1 H N N 436 THR HG21 H N N 437 THR HG22 H N N 438 THR HG23 H N N 439 THR HXT H N N 440 TRP N N N N 441 TRP CA C N S 442 TRP C C N N 443 TRP O O N N 444 TRP CB C N N 445 TRP CG C Y N 446 TRP CD1 C Y N 447 TRP CD2 C Y N 448 TRP NE1 N Y N 449 TRP CE2 C Y N 450 TRP CE3 C Y N 451 TRP CZ2 C Y N 452 TRP CZ3 C Y N 453 TRP CH2 C Y N 454 TRP OXT O N N 455 TRP H H N N 456 TRP H2 H N N 457 TRP HA H N N 458 TRP HB2 H N N 459 TRP HB3 H N N 460 TRP HD1 H N N 461 TRP HE1 H N N 462 TRP HE3 H N N 463 TRP HZ2 H N N 464 TRP HZ3 H N N 465 TRP HH2 H N N 466 TRP HXT H N N 467 TYR N N N N 468 TYR CA C N S 469 TYR C C N N 470 TYR O O N N 471 TYR CB C N N 472 TYR CG C Y N 473 TYR CD1 C Y N 474 TYR CD2 C Y N 475 TYR CE1 C Y N 476 TYR CE2 C Y N 477 TYR CZ C Y N 478 TYR OH O N N 479 TYR OXT O N N 480 TYR H H N N 481 TYR H2 H N N 482 TYR HA H N N 483 TYR HB2 H N N 484 TYR HB3 H N N 485 TYR HD1 H N N 486 TYR HD2 H N N 487 TYR HE1 H N N 488 TYR HE2 H N N 489 TYR HH H N N 490 TYR HXT H N N 491 VAL N N N N 492 VAL CA C N S 493 VAL C C N N 494 VAL O O N N 495 VAL CB C N N 496 VAL CG1 C N N 497 VAL CG2 C N N 498 VAL OXT O N N 499 VAL H H N N 500 VAL H2 H N N 501 VAL HA H N N 502 VAL HB H N N 503 VAL HG11 H N N 504 VAL HG12 H N N 505 VAL HG13 H N N 506 VAL HG21 H N N 507 VAL HG22 H N N 508 VAL HG23 H N N 509 VAL HXT H N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BOG C1 O1 sing N N 70 BOG C1 C2 sing N N 71 BOG C1 O5 sing N N 72 BOG C1 H1 sing N N 73 BOG O1 "C1'" sing N N 74 BOG C2 O2 sing N N 75 BOG C2 C3 sing N N 76 BOG C2 H2 sing N N 77 BOG O2 HO2 sing N N 78 BOG C3 O3 sing N N 79 BOG C3 C4 sing N N 80 BOG C3 H3 sing N N 81 BOG O3 HO3 sing N N 82 BOG C4 O4 sing N N 83 BOG C4 C5 sing N N 84 BOG C4 H4 sing N N 85 BOG O4 HO4 sing N N 86 BOG C5 O5 sing N N 87 BOG C5 C6 sing N N 88 BOG C5 H5 sing N N 89 BOG C6 O6 sing N N 90 BOG C6 H61 sing N N 91 BOG C6 H62 sing N N 92 BOG O6 HO6 sing N N 93 BOG "C1'" "C2'" sing N N 94 BOG "C1'" "H1'1" sing N N 95 BOG "C1'" "H1'2" sing N N 96 BOG "C2'" "C3'" sing N N 97 BOG "C2'" "H2'1" sing N N 98 BOG "C2'" "H2'2" sing N N 99 BOG "C3'" "C4'" sing N N 100 BOG "C3'" "H3'1" sing N N 101 BOG "C3'" "H3'2" sing N N 102 BOG "C4'" "C5'" sing N N 103 BOG "C4'" "H4'1" sing N N 104 BOG "C4'" "H4'2" sing N N 105 BOG "C5'" "C6'" sing N N 106 BOG "C5'" "H5'1" sing N N 107 BOG "C5'" "H5'2" sing N N 108 BOG "C6'" "C7'" sing N N 109 BOG "C6'" "H6'1" sing N N 110 BOG "C6'" "H6'2" sing N N 111 BOG "C7'" "C8'" sing N N 112 BOG "C7'" "H7'1" sing N N 113 BOG "C7'" "H7'2" sing N N 114 BOG "C8'" "H8'1" sing N N 115 BOG "C8'" "H8'2" sing N N 116 BOG "C8'" "H8'3" sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 F46 OAA CBD doub N N 131 F46 OAB CBE doub N N 132 F46 FAC CBH sing N N 133 F46 CAD CAE doub Y N 134 F46 CAD CAF sing Y N 135 F46 CAE CAG sing Y N 136 F46 CAF CAH doub Y N 137 F46 CAG CBJ doub Y N 138 F46 CAH CBJ sing Y N 139 F46 CAI CAK doub Y N 140 F46 CAI CBF sing Y N 141 F46 CAJ CAN sing Y N 142 F46 CAJ CBG doub Y N 143 F46 CAK CBH sing Y N 144 F46 CAL CAM doub Y N 145 F46 CAL CBI sing Y N 146 F46 CAM CBK sing Y N 147 F46 CAN CBN doub Y N 148 F46 CAO CBF doub Y N 149 F46 CAO CBL sing Y N 150 F46 CAP CBG sing Y N 151 F46 CAP CBM doub Y N 152 F46 CAQ CBI doub Y N 153 F46 CAQ CBO sing Y N 154 F46 CAR CAU sing N N 155 F46 CAR OBA sing N N 156 F46 CAS CAV sing N N 157 F46 CAS OBA sing N N 158 F46 CAT CAW sing N N 159 F46 CAT OBB sing N N 160 F46 CAU NBP sing N N 161 F46 CAV NBP sing N N 162 F46 CAW NBP sing N N 163 F46 CAX OBC sing N N 164 F46 CAX CBK sing N N 165 F46 NAY CBD sing N N 166 F46 NAY CBL sing N N 167 F46 NAZ CBF sing N N 168 F46 NAZ CBG sing N N 169 F46 OBB CBI sing N N 170 F46 OBC CBM sing N N 171 F46 CBD CBJ sing N N 172 F46 CBE CBN sing N N 173 F46 CBE CBO sing N N 174 F46 CBH CBL doub Y N 175 F46 CBK CBO doub Y N 176 F46 CBM CBN sing Y N 177 F46 CAD HAD sing N N 178 F46 CAE HAE sing N N 179 F46 CAF HAF sing N N 180 F46 CAG HAG sing N N 181 F46 CAH HAH sing N N 182 F46 CAI HAI sing N N 183 F46 CAJ HAJ sing N N 184 F46 CAK HAK sing N N 185 F46 CAL HAL sing N N 186 F46 CAM HAM sing N N 187 F46 CAN HAN sing N N 188 F46 CAO HAO sing N N 189 F46 CAP HAP sing N N 190 F46 CAQ HAQ sing N N 191 F46 CAR HAR sing N N 192 F46 CAR HARA sing N N 193 F46 CAS HAS sing N N 194 F46 CAS HASA sing N N 195 F46 CAT HAT sing N N 196 F46 CAT HATA sing N N 197 F46 CAU HAU sing N N 198 F46 CAU HAUA sing N N 199 F46 CAV HAV sing N N 200 F46 CAV HAVA sing N N 201 F46 CAW HAW sing N N 202 F46 CAW HAWA sing N N 203 F46 CAX HAX sing N N 204 F46 CAX HAXA sing N N 205 F46 NAY HNAY sing N N 206 F46 NAZ HNAZ sing N N 207 GLN N CA sing N N 208 GLN N H sing N N 209 GLN N H2 sing N N 210 GLN CA C sing N N 211 GLN CA CB sing N N 212 GLN CA HA sing N N 213 GLN C O doub N N 214 GLN C OXT sing N N 215 GLN CB CG sing N N 216 GLN CB HB2 sing N N 217 GLN CB HB3 sing N N 218 GLN CG CD sing N N 219 GLN CG HG2 sing N N 220 GLN CG HG3 sing N N 221 GLN CD OE1 doub N N 222 GLN CD NE2 sing N N 223 GLN NE2 HE21 sing N N 224 GLN NE2 HE22 sing N N 225 GLN OXT HXT sing N N 226 GLU N CA sing N N 227 GLU N H sing N N 228 GLU N H2 sing N N 229 GLU CA C sing N N 230 GLU CA CB sing N N 231 GLU CA HA sing N N 232 GLU C O doub N N 233 GLU C OXT sing N N 234 GLU CB CG sing N N 235 GLU CB HB2 sing N N 236 GLU CB HB3 sing N N 237 GLU CG CD sing N N 238 GLU CG HG2 sing N N 239 GLU CG HG3 sing N N 240 GLU CD OE1 doub N N 241 GLU CD OE2 sing N N 242 GLU OE2 HE2 sing N N 243 GLU OXT HXT sing N N 244 GLY N CA sing N N 245 GLY N H sing N N 246 GLY N H2 sing N N 247 GLY CA C sing N N 248 GLY CA HA2 sing N N 249 GLY CA HA3 sing N N 250 GLY C O doub N N 251 GLY C OXT sing N N 252 GLY OXT HXT sing N N 253 HIS N CA sing N N 254 HIS N H sing N N 255 HIS N H2 sing N N 256 HIS CA C sing N N 257 HIS CA CB sing N N 258 HIS CA HA sing N N 259 HIS C O doub N N 260 HIS C OXT sing N N 261 HIS CB CG sing N N 262 HIS CB HB2 sing N N 263 HIS CB HB3 sing N N 264 HIS CG ND1 sing Y N 265 HIS CG CD2 doub Y N 266 HIS ND1 CE1 doub Y N 267 HIS ND1 HD1 sing N N 268 HIS CD2 NE2 sing Y N 269 HIS CD2 HD2 sing N N 270 HIS CE1 NE2 sing Y N 271 HIS CE1 HE1 sing N N 272 HIS NE2 HE2 sing N N 273 HIS OXT HXT sing N N 274 HOH O H1 sing N N 275 HOH O H2 sing N N 276 ILE N CA sing N N 277 ILE N H sing N N 278 ILE N H2 sing N N 279 ILE CA C sing N N 280 ILE CA CB sing N N 281 ILE CA HA sing N N 282 ILE C O doub N N 283 ILE C OXT sing N N 284 ILE CB CG1 sing N N 285 ILE CB CG2 sing N N 286 ILE CB HB sing N N 287 ILE CG1 CD1 sing N N 288 ILE CG1 HG12 sing N N 289 ILE CG1 HG13 sing N N 290 ILE CG2 HG21 sing N N 291 ILE CG2 HG22 sing N N 292 ILE CG2 HG23 sing N N 293 ILE CD1 HD11 sing N N 294 ILE CD1 HD12 sing N N 295 ILE CD1 HD13 sing N N 296 ILE OXT HXT sing N N 297 LEU N CA sing N N 298 LEU N H sing N N 299 LEU N H2 sing N N 300 LEU CA C sing N N 301 LEU CA CB sing N N 302 LEU CA HA sing N N 303 LEU C O doub N N 304 LEU C OXT sing N N 305 LEU CB CG sing N N 306 LEU CB HB2 sing N N 307 LEU CB HB3 sing N N 308 LEU CG CD1 sing N N 309 LEU CG CD2 sing N N 310 LEU CG HG sing N N 311 LEU CD1 HD11 sing N N 312 LEU CD1 HD12 sing N N 313 LEU CD1 HD13 sing N N 314 LEU CD2 HD21 sing N N 315 LEU CD2 HD22 sing N N 316 LEU CD2 HD23 sing N N 317 LEU OXT HXT sing N N 318 LYS N CA sing N N 319 LYS N H sing N N 320 LYS N H2 sing N N 321 LYS CA C sing N N 322 LYS CA CB sing N N 323 LYS CA HA sing N N 324 LYS C O doub N N 325 LYS C OXT sing N N 326 LYS CB CG sing N N 327 LYS CB HB2 sing N N 328 LYS CB HB3 sing N N 329 LYS CG CD sing N N 330 LYS CG HG2 sing N N 331 LYS CG HG3 sing N N 332 LYS CD CE sing N N 333 LYS CD HD2 sing N N 334 LYS CD HD3 sing N N 335 LYS CE NZ sing N N 336 LYS CE HE2 sing N N 337 LYS CE HE3 sing N N 338 LYS NZ HZ1 sing N N 339 LYS NZ HZ2 sing N N 340 LYS NZ HZ3 sing N N 341 LYS OXT HXT sing N N 342 MET N CA sing N N 343 MET N H sing N N 344 MET N H2 sing N N 345 MET CA C sing N N 346 MET CA CB sing N N 347 MET CA HA sing N N 348 MET C O doub N N 349 MET C OXT sing N N 350 MET CB CG sing N N 351 MET CB HB2 sing N N 352 MET CB HB3 sing N N 353 MET CG SD sing N N 354 MET CG HG2 sing N N 355 MET CG HG3 sing N N 356 MET SD CE sing N N 357 MET CE HE1 sing N N 358 MET CE HE2 sing N N 359 MET CE HE3 sing N N 360 MET OXT HXT sing N N 361 PHE N CA sing N N 362 PHE N H sing N N 363 PHE N H2 sing N N 364 PHE CA C sing N N 365 PHE CA CB sing N N 366 PHE CA HA sing N N 367 PHE C O doub N N 368 PHE C OXT sing N N 369 PHE CB CG sing N N 370 PHE CB HB2 sing N N 371 PHE CB HB3 sing N N 372 PHE CG CD1 doub Y N 373 PHE CG CD2 sing Y N 374 PHE CD1 CE1 sing Y N 375 PHE CD1 HD1 sing N N 376 PHE CD2 CE2 doub Y N 377 PHE CD2 HD2 sing N N 378 PHE CE1 CZ doub Y N 379 PHE CE1 HE1 sing N N 380 PHE CE2 CZ sing Y N 381 PHE CE2 HE2 sing N N 382 PHE CZ HZ sing N N 383 PHE OXT HXT sing N N 384 PRO N CA sing N N 385 PRO N CD sing N N 386 PRO N H sing N N 387 PRO CA C sing N N 388 PRO CA CB sing N N 389 PRO CA HA sing N N 390 PRO C O doub N N 391 PRO C OXT sing N N 392 PRO CB CG sing N N 393 PRO CB HB2 sing N N 394 PRO CB HB3 sing N N 395 PRO CG CD sing N N 396 PRO CG HG2 sing N N 397 PRO CG HG3 sing N N 398 PRO CD HD2 sing N N 399 PRO CD HD3 sing N N 400 PRO OXT HXT sing N N 401 SER N CA sing N N 402 SER N H sing N N 403 SER N H2 sing N N 404 SER CA C sing N N 405 SER CA CB sing N N 406 SER CA HA sing N N 407 SER C O doub N N 408 SER C OXT sing N N 409 SER CB OG sing N N 410 SER CB HB2 sing N N 411 SER CB HB3 sing N N 412 SER OG HG sing N N 413 SER OXT HXT sing N N 414 THR N CA sing N N 415 THR N H sing N N 416 THR N H2 sing N N 417 THR CA C sing N N 418 THR CA CB sing N N 419 THR CA HA sing N N 420 THR C O doub N N 421 THR C OXT sing N N 422 THR CB OG1 sing N N 423 THR CB CG2 sing N N 424 THR CB HB sing N N 425 THR OG1 HG1 sing N N 426 THR CG2 HG21 sing N N 427 THR CG2 HG22 sing N N 428 THR CG2 HG23 sing N N 429 THR OXT HXT sing N N 430 TRP N CA sing N N 431 TRP N H sing N N 432 TRP N H2 sing N N 433 TRP CA C sing N N 434 TRP CA CB sing N N 435 TRP CA HA sing N N 436 TRP C O doub N N 437 TRP C OXT sing N N 438 TRP CB CG sing N N 439 TRP CB HB2 sing N N 440 TRP CB HB3 sing N N 441 TRP CG CD1 doub Y N 442 TRP CG CD2 sing Y N 443 TRP CD1 NE1 sing Y N 444 TRP CD1 HD1 sing N N 445 TRP CD2 CE2 doub Y N 446 TRP CD2 CE3 sing Y N 447 TRP NE1 CE2 sing Y N 448 TRP NE1 HE1 sing N N 449 TRP CE2 CZ2 sing Y N 450 TRP CE3 CZ3 doub Y N 451 TRP CE3 HE3 sing N N 452 TRP CZ2 CH2 doub Y N 453 TRP CZ2 HZ2 sing N N 454 TRP CZ3 CH2 sing Y N 455 TRP CZ3 HZ3 sing N N 456 TRP CH2 HH2 sing N N 457 TRP OXT HXT sing N N 458 TYR N CA sing N N 459 TYR N H sing N N 460 TYR N H2 sing N N 461 TYR CA C sing N N 462 TYR CA CB sing N N 463 TYR CA HA sing N N 464 TYR C O doub N N 465 TYR C OXT sing N N 466 TYR CB CG sing N N 467 TYR CB HB2 sing N N 468 TYR CB HB3 sing N N 469 TYR CG CD1 doub Y N 470 TYR CG CD2 sing Y N 471 TYR CD1 CE1 sing Y N 472 TYR CD1 HD1 sing N N 473 TYR CD2 CE2 doub Y N 474 TYR CD2 HD2 sing N N 475 TYR CE1 CZ doub Y N 476 TYR CE1 HE1 sing N N 477 TYR CE2 CZ sing Y N 478 TYR CE2 HE2 sing N N 479 TYR CZ OH sing N N 480 TYR OH HH sing N N 481 TYR OXT HXT sing N N 482 VAL N CA sing N N 483 VAL N H sing N N 484 VAL N H2 sing N N 485 VAL CA C sing N N 486 VAL CA CB sing N N 487 VAL CA HA sing N N 488 VAL C O doub N N 489 VAL C OXT sing N N 490 VAL CB CG1 sing N N 491 VAL CB CG2 sing N N 492 VAL CB HB sing N N 493 VAL CG1 HG11 sing N N 494 VAL CG1 HG12 sing N N 495 VAL CG1 HG13 sing N N 496 VAL CG2 HG21 sing N N 497 VAL CG2 HG22 sing N N 498 VAL CG2 HG23 sing N N 499 VAL OXT HXT sing N N 500 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'octyl beta-D-glucopyranoside' BOG 3 'N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide' F46 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3QUD _pdbx_initial_refinement_model.details 'pdb entry 3QUD' #