data_4L9V # _entry.id 4L9V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4L9V RCSB RCSB080363 WWPDB D_1000080363 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4L9J . unspecified PDB 4L9N . unspecified PDB 4L9T . unspecified PDB 4LD5 . unspecified # _pdbx_database_status.entry_id 4L9V _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Birukou, I.' 1 'Brennan, R.G.' 2 # _citation.id primary _citation.title ;The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. ; _citation.journal_abbrev MBio _citation.journal_volume 4 _citation.page_first e00528 _citation.page_last e00513 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2150-7511 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23982071 _citation.pdbx_database_id_DOI 10.1128/mBio.00528-13 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Birukou, I.' 1 primary 'Tonthat, N.K.' 2 primary 'Seo, S.M.' 3 primary 'Schindler, B.D.' 4 primary 'Kaatz, G.W.' 5 primary 'Brennan, R.G.' 6 # _cell.length_a 120.767 _cell.length_b 120.767 _cell.length_c 54.476 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4L9V _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3 2' _symmetry.entry_id 4L9V _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 155 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man MepR 17268.537 1 ? F27L ? ? 2 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MarR family transcription repressor MepR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)EFTYSYLFR(MSE)ISHE(MSE)KQKADQKLEQLDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLL RNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDE(MSE)EQTLVSQLSEEENEQ(MSE)KANLTK(MSE)LS SLQHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEFTYSYLFRMISHEMKQKADQKLEQLDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRY VDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLU n 1 3 PHE n 1 4 THR n 1 5 TYR n 1 6 SER n 1 7 TYR n 1 8 LEU n 1 9 PHE n 1 10 ARG n 1 11 MSE n 1 12 ILE n 1 13 SER n 1 14 HIS n 1 15 GLU n 1 16 MSE n 1 17 LYS n 1 18 GLN n 1 19 LYS n 1 20 ALA n 1 21 ASP n 1 22 GLN n 1 23 LYS n 1 24 LEU n 1 25 GLU n 1 26 GLN n 1 27 LEU n 1 28 ASP n 1 29 ILE n 1 30 THR n 1 31 ASN n 1 32 GLU n 1 33 GLN n 1 34 GLY n 1 35 HIS n 1 36 THR n 1 37 LEU n 1 38 GLY n 1 39 TYR n 1 40 LEU n 1 41 TYR n 1 42 ALA n 1 43 HIS n 1 44 GLN n 1 45 GLN n 1 46 ASP n 1 47 GLY n 1 48 LEU n 1 49 THR n 1 50 GLN n 1 51 ASN n 1 52 ASP n 1 53 ILE n 1 54 ALA n 1 55 LYS n 1 56 ALA n 1 57 LEU n 1 58 GLN n 1 59 ARG n 1 60 THR n 1 61 GLY n 1 62 PRO n 1 63 THR n 1 64 VAL n 1 65 SER n 1 66 ASN n 1 67 LEU n 1 68 LEU n 1 69 ARG n 1 70 ASN n 1 71 LEU n 1 72 GLU n 1 73 ARG n 1 74 LYS n 1 75 LYS n 1 76 LEU n 1 77 ILE n 1 78 TYR n 1 79 ARG n 1 80 TYR n 1 81 VAL n 1 82 ASP n 1 83 ALA n 1 84 GLN n 1 85 ASP n 1 86 THR n 1 87 ARG n 1 88 ARG n 1 89 LYS n 1 90 ASN n 1 91 ILE n 1 92 GLY n 1 93 LEU n 1 94 THR n 1 95 THR n 1 96 SER n 1 97 GLY n 1 98 ILE n 1 99 LYS n 1 100 LEU n 1 101 VAL n 1 102 GLU n 1 103 ALA n 1 104 PHE n 1 105 THR n 1 106 SER n 1 107 ILE n 1 108 PHE n 1 109 ASP n 1 110 GLU n 1 111 MSE n 1 112 GLU n 1 113 GLN n 1 114 THR n 1 115 LEU n 1 116 VAL n 1 117 SER n 1 118 GLN n 1 119 LEU n 1 120 SER n 1 121 GLU n 1 122 GLU n 1 123 GLU n 1 124 ASN n 1 125 GLU n 1 126 GLN n 1 127 MSE n 1 128 LYS n 1 129 ALA n 1 130 ASN n 1 131 LEU n 1 132 THR n 1 133 LYS n 1 134 MSE n 1 135 LEU n 1 136 SER n 1 137 SER n 1 138 LEU n 1 139 GLN n 1 140 HIS n 1 141 HIS n 1 142 HIS n 1 143 HIS n 1 144 HIS n 1 145 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mepR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5Y812_STAAU _struct_ref.pdbx_db_accession Q5Y812 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRY VDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4L9V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 139 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5Y812 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 139 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 139 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4L9V LEU A 27 ? UNP Q5Y812 PHE 27 'ENGINEERED MUTATION' 27 1 1 4L9V HIS A 140 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 140 2 1 4L9V HIS A 141 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 141 3 1 4L9V HIS A 142 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 142 4 1 4L9V HIS A 143 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 143 5 1 4L9V HIS A 144 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 144 6 1 4L9V HIS A 145 ? UNP Q5Y812 ? ? 'EXPRESSION TAG' 145 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4L9V _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.2 M Na tartrate dibasic, 20% PEG 3350, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-03-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ;Si 220. Rosenbaum-Rock double-crystal monochromator: liquid nitrogen cooled, sagitally focusing 2nd crystal, Rosenbaum-Rock vertical focusing mirror ; _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97915 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 0.97915 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 4L9V _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 6.9 _reflns.d_resolution_high 2.3740 _reflns.d_resolution_low 50 _reflns.number_all 6220 _reflns.number_obs 6201 _reflns.percent_possible_obs 99.7 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4L9V _refine.ls_d_res_high 2.3740 _refine.ls_d_res_low 25.6040 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.5000 _refine.ls_number_reflns_obs 6159 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_obs 0.2337 _refine.ls_R_factor_R_work 0.2313 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2563 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.0200 _refine.ls_number_reflns_R_free 617 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 67.6560 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 301.500 _refine.B_iso_min 34.120 _refine.pdbx_overall_phase_error 29.9300 _refine.occupancy_max 1.000 _refine.occupancy_min 0.270 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1064 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 1065 _refine_hist.d_res_high 2.3740 _refine_hist.d_res_low 25.6040 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1076 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1453 0.637 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 174 0.043 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 185 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 393 15.473 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.374 2.6126 4 96.0000 1323 . 0.2922 0.3206 . 149 . 1472 . . 'X-RAY DIFFRACTION' 2.6126 2.9902 4 99.0000 1383 . 0.2863 0.2991 . 153 . 1536 . . 'X-RAY DIFFRACTION' 2.9902 3.7654 4 100.0000 1396 . 0.2579 0.2692 . 155 . 1551 . . 'X-RAY DIFFRACTION' 3.7654 25.604 4 99.0000 1440 . 0.2030 0.2341 . 160 . 1600 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4L9V _struct.title 'Crystal structure of Se-Met derivative MepR F27L mutant from multidrug resistant S. aureus clinical isolate' _struct.pdbx_descriptor MepR _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L9V _struct_keywords.text 'winged helix-turn-helix, wHTH, transcription repressor, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 4 ? ASP A 28 ? THR A 4 ASP A 28 1 ? 25 HELX_P HELX_P2 2 THR A 30 ? GLN A 44 ? THR A 30 GLN A 44 1 ? 15 HELX_P HELX_P3 3 GLN A 45 ? GLY A 47 ? GLN A 45 GLY A 47 5 ? 3 HELX_P HELX_P4 4 THR A 49 ? GLN A 58 ? THR A 49 GLN A 58 1 ? 10 HELX_P HELX_P5 5 THR A 60 ? LYS A 74 ? THR A 60 LYS A 74 1 ? 15 HELX_P HELX_P6 6 THR A 94 ? SER A 117 ? THR A 94 SER A 117 1 ? 24 HELX_P HELX_P7 7 SER A 120 ? GLN A 139 ? SER A 120 GLN A 139 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A GLU 2 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A ARG 10 C ? ? ? 1_555 A MSE 11 N ? ? A ARG 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A MSE 11 C ? ? ? 1_555 A ILE 12 N ? ? A MSE 11 A ILE 12 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A GLU 15 C ? ? ? 1_555 A MSE 16 N ? ? A GLU 15 A MSE 16 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? A MSE 16 C ? ? ? 1_555 A LYS 17 N ? ? A MSE 16 A LYS 17 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A GLU 110 C ? ? ? 1_555 A MSE 111 N ? ? A GLU 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 111 C ? ? ? 1_555 A GLU 112 N ? ? A MSE 111 A GLU 112 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? A GLN 126 C ? ? ? 1_555 A MSE 127 N ? ? A GLN 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.327 ? covale9 covale ? ? A MSE 127 C ? ? ? 1_555 A LYS 128 N ? ? A MSE 127 A LYS 128 1_555 ? ? ? ? ? ? ? 1.330 ? covale10 covale ? ? A LYS 133 C ? ? ? 1_555 A MSE 134 N ? ? A LYS 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.329 ? covale11 covale ? ? A MSE 134 C ? ? ? 1_555 A LEU 135 N ? ? A MSE 134 A LEU 135 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 77 ? VAL A 81 ? ILE A 77 VAL A 81 A 2 LYS A 89 ? LEU A 93 ? LYS A 89 LEU A 93 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TYR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 80 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 80 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ASN _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 90 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ASN _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 90 # _atom_sites.entry_id 4L9V _atom_sites.fract_transf_matrix[1][1] 0.008280 _atom_sites.fract_transf_matrix[1][2] 0.004781 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009561 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018357 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 MSE 11 11 11 MSE MSE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 MSE 16 16 16 MSE MSE A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 MSE 111 111 111 MSE MSE A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 MSE 127 127 127 MSE MSE A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 ASN 130 130 130 ASN ASN A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 MSE 134 134 134 MSE MSE A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 HIS 140 140 ? ? ? A . n A 1 141 HIS 141 141 ? ? ? A . n A 1 142 HIS 142 142 ? ? ? A . n A 1 143 HIS 143 143 ? ? ? A . n A 1 144 HIS 144 144 ? ? ? A . n A 1 145 HIS 145 145 ? ? ? A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HOH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id HOH _pdbx_nonpoly_scheme.auth_mon_id HOH _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 11 A MSE 11 ? MET SELENOMETHIONINE 3 A MSE 16 A MSE 16 ? MET SELENOMETHIONINE 4 A MSE 111 A MSE 111 ? MET SELENOMETHIONINE 5 A MSE 127 A MSE 127 ? MET SELENOMETHIONINE 6 A MSE 134 A MSE 134 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3560 ? 1 MORE -32 ? 1 'SSA (A^2)' 15950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 60.3835000000 -0.8660254038 0.5000000000 0.0000000000 34.8624299796 0.0000000000 0.0000000000 -1.0000000000 18.1586666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-11 2 'Structure model' 1 1 2013-10-30 3 'Structure model' 1 2 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 33.6070 12.9761 15.1326 0.4519 0.6093 0.4212 -0.2765 -0.0521 0.1611 1.1790 0.5152 1.6251 0.0202 -1.0759 0.0171 0.3336 -0.8101 -0.9542 -0.4500 -0.1316 0.1603 0.8135 -0.3692 0.9723 'X-RAY DIFFRACTION' 2 ? refined 15.8906 -4.0875 13.0363 0.7184 0.9153 -0.4081 -0.1678 0.1552 -0.0957 0.4010 4.5388 0.1033 1.0835 0.0981 0.5766 0.3344 -0.4816 0.0074 0.1389 0.6746 1.5364 -1.2472 -0.9560 2.4082 'X-RAY DIFFRACTION' 3 ? refined 8.7741 -9.0379 6.3990 0.8480 0.5140 0.8067 -0.1391 -0.1815 -0.0803 0.6182 0.6908 0.4078 0.0087 -0.4816 -0.1092 0.9339 -0.0781 0.0507 0.7645 0.4286 1.6072 -1.3325 0.5073 -0.5870 'X-RAY DIFFRACTION' 4 ? refined 18.6907 -14.8979 8.9594 0.8666 0.7352 0.8191 0.2311 0.0434 -0.1741 0.5327 0.3541 0.0557 0.4372 0.1181 0.1198 0.2853 -0.6488 -0.0226 0.2062 -1.2671 -1.5599 -0.1254 0.5149 0.2426 'X-RAY DIFFRACTION' 5 ? refined 11.5869 -3.3989 17.3619 0.5239 0.4047 0.3423 -0.1780 0.0327 -0.0860 1.4819 0.4649 -0.2153 0.4859 0.5616 -0.1528 0.5835 -0.3549 0.2731 -0.3986 -0.3366 -0.3190 0.1747 -0.0694 0.1934 'X-RAY DIFFRACTION' 6 ? refined 22.8385 22.6476 5.7293 0.2026 0.7721 0.8395 -0.1916 -0.0773 -0.1636 1.3030 2.8102 3.1437 1.2180 -1.2518 -2.9649 0.8813 -0.1587 0.3596 1.3653 1.8170 1.3815 0.9211 -1.7318 0.4416 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 0 ;chain 'A' and (resid 1 through 27 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 0 ;chain 'A' and (resid 28 through 43 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 0 A 0 ;chain 'A' and (resid 44 through 57 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 0 A 0 ;chain 'A' and (resid 58 through 73 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 0 A 0 ;chain 'A' and (resid 74 through 118 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 0 A 0 ;chain 'A' and (resid 119 through 139 ) ; ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX 1.8.1_1168 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SERGUI 'control program' ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 PHENIX '(Phaser)' ? ? ? ? phasing ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 10 ? CG ? A ARG 10 CG 2 1 Y 1 A ARG 10 ? CD ? A ARG 10 CD 3 1 Y 1 A ARG 10 ? NE ? A ARG 10 NE 4 1 Y 1 A ARG 10 ? CZ ? A ARG 10 CZ 5 1 Y 1 A ARG 10 ? NH1 ? A ARG 10 NH1 6 1 Y 1 A ARG 10 ? NH2 ? A ARG 10 NH2 7 1 Y 1 A GLN 22 ? CG ? A GLN 22 CG 8 1 Y 1 A GLN 22 ? CD ? A GLN 22 CD 9 1 Y 1 A GLN 22 ? OE1 ? A GLN 22 OE1 10 1 Y 1 A GLN 22 ? NE2 ? A GLN 22 NE2 11 1 Y 1 A ASP 28 ? CG ? A ASP 28 CG 12 1 Y 1 A ASP 28 ? OD1 ? A ASP 28 OD1 13 1 Y 1 A ASP 28 ? OD2 ? A ASP 28 OD2 14 1 Y 1 A GLU 32 ? CG ? A GLU 32 CG 15 1 Y 1 A GLU 32 ? CD ? A GLU 32 CD 16 1 Y 1 A GLU 32 ? OE1 ? A GLU 32 OE1 17 1 Y 1 A GLU 32 ? OE2 ? A GLU 32 OE2 18 1 Y 1 A HIS 35 ? CG ? A HIS 35 CG 19 1 Y 1 A HIS 35 ? ND1 ? A HIS 35 ND1 20 1 Y 1 A HIS 35 ? CD2 ? A HIS 35 CD2 21 1 Y 1 A HIS 35 ? CE1 ? A HIS 35 CE1 22 1 Y 1 A HIS 35 ? NE2 ? A HIS 35 NE2 23 1 Y 1 A GLN 45 ? CG ? A GLN 45 CG 24 1 Y 1 A GLN 45 ? CD ? A GLN 45 CD 25 1 Y 1 A GLN 45 ? OE1 ? A GLN 45 OE1 26 1 Y 1 A GLN 45 ? NE2 ? A GLN 45 NE2 27 1 Y 1 A ASN 51 ? CG ? A ASN 51 CG 28 1 Y 1 A ASN 51 ? OD1 ? A ASN 51 OD1 29 1 Y 1 A ASN 51 ? ND2 ? A ASN 51 ND2 30 1 Y 1 A LYS 55 ? CG ? A LYS 55 CG 31 1 Y 1 A LYS 55 ? CD ? A LYS 55 CD 32 1 Y 1 A LYS 55 ? CE ? A LYS 55 CE 33 1 Y 1 A LYS 55 ? NZ ? A LYS 55 NZ 34 1 Y 1 A GLN 58 ? CG ? A GLN 58 CG 35 1 Y 1 A GLN 58 ? CD ? A GLN 58 CD 36 1 Y 1 A GLN 58 ? OE1 ? A GLN 58 OE1 37 1 Y 1 A GLN 58 ? NE2 ? A GLN 58 NE2 38 1 Y 1 A ASN 70 ? CG ? A ASN 70 CG 39 1 Y 1 A ASN 70 ? OD1 ? A ASN 70 OD1 40 1 Y 1 A ASN 70 ? ND2 ? A ASN 70 ND2 41 1 Y 1 A ARG 73 ? CG ? A ARG 73 CG 42 1 Y 1 A ARG 73 ? CD ? A ARG 73 CD 43 1 Y 1 A ARG 73 ? NE ? A ARG 73 NE 44 1 Y 1 A ARG 73 ? CZ ? A ARG 73 CZ 45 1 Y 1 A ARG 73 ? NH1 ? A ARG 73 NH1 46 1 Y 1 A ARG 73 ? NH2 ? A ARG 73 NH2 47 1 Y 1 A LYS 74 ? CG ? A LYS 74 CG 48 1 Y 1 A LYS 74 ? CD ? A LYS 74 CD 49 1 Y 1 A LYS 74 ? CE ? A LYS 74 CE 50 1 Y 1 A LYS 74 ? NZ ? A LYS 74 NZ 51 1 Y 1 A LYS 75 ? CG ? A LYS 75 CG 52 1 Y 1 A LYS 75 ? CD ? A LYS 75 CD 53 1 Y 1 A LYS 75 ? CE ? A LYS 75 CE 54 1 Y 1 A LYS 75 ? NZ ? A LYS 75 NZ 55 1 Y 1 A GLN 84 ? CG ? A GLN 84 CG 56 1 Y 1 A GLN 84 ? CD ? A GLN 84 CD 57 1 Y 1 A GLN 84 ? OE1 ? A GLN 84 OE1 58 1 Y 1 A GLN 84 ? NE2 ? A GLN 84 NE2 59 1 Y 1 A GLN 113 ? CG ? A GLN 113 CG 60 1 Y 1 A GLN 113 ? CD ? A GLN 113 CD 61 1 Y 1 A GLN 113 ? OE1 ? A GLN 113 OE1 62 1 Y 1 A GLN 113 ? NE2 ? A GLN 113 NE2 63 1 Y 1 A GLU 125 ? CG ? A GLU 125 CG 64 1 Y 1 A GLU 125 ? CD ? A GLU 125 CD 65 1 Y 1 A GLU 125 ? OE1 ? A GLU 125 OE1 66 1 Y 1 A GLU 125 ? OE2 ? A GLU 125 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 140 ? A HIS 140 2 1 Y 1 A HIS 141 ? A HIS 141 3 1 Y 1 A HIS 142 ? A HIS 142 4 1 Y 1 A HIS 143 ? A HIS 143 5 1 Y 1 A HIS 144 ? A HIS 144 6 1 Y 1 A HIS 145 ? A HIS 145 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #