HEADER TRANSPORT PROTEIN, MEMBRANE PROTEIN 25-JUN-13 4LDS TITLE THE INWARD-FACING STRUCTURE OF THE GLUCOSE TRANSPORTER FROM TITLE 2 STAPHYLOCOCCUS EPIDERMIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE TRANSPORTER GLCP; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 22-467; COMPND 5 SYNONYM: GLUCOSE/H(+) SYMPORTER; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS EPIDERMIDIS (STRAIN ATCC 12228 / SOURCE 3 FDA PCI 1200); SOURCE 4 ORGANISM_TAXID: 176280; SOURCE 5 STRAIN: ATCC 12228 / FDA PCI 1200; SOURCE 6 GENE: GLCP, SE_0247; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA HELICAL TRANSMEMBRANE PROTEIN, GLUCOSE TRANSPORTER, MAJOR KEYWDS 2 FACILITATOR SUPERFAMILY, TRANSPORT PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.CHOE,A.ALESHIN,C.V.IANCU REVDAT 4 28-FEB-24 4LDS 1 REMARK REVDAT 3 02-SEP-20 4LDS 1 COMPND SOURCE DBREF REVDAT 2 05-FEB-14 4LDS 1 JRNL REVDAT 1 16-OCT-13 4LDS 0 JRNL AUTH C.V.IANCU,J.ZAMOON,S.B.WOO,A.ALESHIN,J.Y.CHOE JRNL TITL CRYSTAL STRUCTURE OF A GLUCOSE/H+ SYMPORTER AND ITS JRNL TITL 2 MECHANISM OF ACTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 17862 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24127585 JRNL DOI 10.1073/PNAS.1311485110 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : LS_WUNIT_K1 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 38746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.304 REMARK 3 R VALUE (WORKING SET) : 0.302 REMARK 3 FREE R VALUE : 0.341 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9028 - 7.5786 1.00 2752 139 0.2120 0.2982 REMARK 3 2 7.5786 - 6.0716 0.99 2675 149 0.3447 0.3874 REMARK 3 3 6.0716 - 5.3208 0.98 2640 134 0.3450 0.3496 REMARK 3 4 5.3208 - 4.8420 0.97 2611 136 0.3319 0.3574 REMARK 3 5 4.8420 - 4.4993 0.98 2627 136 0.3317 0.3578 REMARK 3 6 4.4993 - 4.2367 0.98 2627 149 0.3349 0.3886 REMARK 3 7 4.2367 - 4.0263 0.99 2661 137 0.3346 0.3425 REMARK 3 8 4.0263 - 3.8524 0.99 2645 136 0.3211 0.3405 REMARK 3 9 3.8524 - 3.7051 0.99 2596 154 0.3121 0.3573 REMARK 3 10 3.7051 - 3.5780 0.99 2654 139 0.3135 0.3140 REMARK 3 11 3.5780 - 3.4667 0.98 2603 143 0.3134 0.3277 REMARK 3 12 3.4667 - 3.3681 0.99 2634 131 0.3160 0.3415 REMARK 3 13 3.3681 - 3.2798 0.98 2649 123 0.3147 0.3733 REMARK 3 14 3.2798 - 3.2001 0.91 2426 140 0.3257 0.3510 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.590 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 6516 REMARK 3 ANGLE : 2.057 8862 REMARK 3 CHIRALITY : 0.163 1096 REMARK 3 PLANARITY : 0.009 1064 REMARK 3 DIHEDRAL : 20.570 2282 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -36.4923 56.8719 -11.1960 REMARK 3 T TENSOR REMARK 3 T11: 0.0274 T22: 0.2095 REMARK 3 T33: 0.0601 T12: 0.0254 REMARK 3 T13: -0.0857 T23: -0.1386 REMARK 3 L TENSOR REMARK 3 L11: 0.0310 L22: 0.0063 REMARK 3 L33: 0.0415 L12: -0.0043 REMARK 3 L13: -0.0322 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: -0.0636 S13: 0.0241 REMARK 3 S21: -0.0181 S22: -0.0309 S23: -0.0139 REMARK 3 S31: -0.0009 S32: 0.0314 S33: -0.1540 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LDS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080502. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8211 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38767 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11700 REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59800 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 400, 0.1 M CA ACETATE, 0.1 M REMARK 280 NACL, 0.1 M MES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.02887 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.78927 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.02887 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 59.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 78.78927 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ALA A 3 REMARK 465 ASN A 4 REMARK 465 LYS A 5 REMARK 465 TYR A 6 REMARK 465 ARG A 428 REMARK 465 SER A 429 REMARK 465 LEU A 430 REMARK 465 GLU A 431 REMARK 465 GLU A 432 REMARK 465 ILE A 433 REMARK 465 GLU A 434 REMARK 465 TYR A 435 REMARK 465 GLU A 436 REMARK 465 LEU A 437 REMARK 465 ARG A 438 REMARK 465 GLU A 439 REMARK 465 ARG A 440 REMARK 465 THR A 441 REMARK 465 GLY A 442 REMARK 465 ALA A 443 REMARK 465 ARG A 444 REMARK 465 THR A 445 REMARK 465 GLU A 446 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 ALA B 3 REMARK 465 ASN B 4 REMARK 465 LYS B 5 REMARK 465 TYR B 6 REMARK 465 ARG B 428 REMARK 465 SER B 429 REMARK 465 LEU B 430 REMARK 465 GLU B 431 REMARK 465 GLU B 432 REMARK 465 ILE B 433 REMARK 465 GLU B 434 REMARK 465 TYR B 435 REMARK 465 GLU B 436 REMARK 465 LEU B 437 REMARK 465 ARG B 438 REMARK 465 GLU B 439 REMARK 465 ARG B 440 REMARK 465 THR B 441 REMARK 465 GLY B 442 REMARK 465 ALA B 443 REMARK 465 ARG B 444 REMARK 465 THR B 445 REMARK 465 GLU B 446 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 276 OG SER A 280 2.03 REMARK 500 O SER A 131 OG SER A 134 2.07 REMARK 500 O GLY B 45 OG SER B 49 2.09 REMARK 500 O GLY A 45 OG SER A 49 2.14 REMARK 500 O VAL A 47 OG SER A 50 2.16 REMARK 500 O LEU A 306 OG SER A 351 2.16 REMARK 500 O GLY A 130 N GLY A 133 2.16 REMARK 500 O VAL B 57 OG SER B 61 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 31 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 LEU A 39 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 PRO B 234 C - N - CA ANGL. DEV. = 10.4 DEGREES REMARK 500 GLY B 270 N - CA - C ANGL. DEV. = 19.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 39 68.35 36.95 REMARK 500 ASN A 40 -159.36 -150.94 REMARK 500 THR A 93 -66.79 -131.69 REMARK 500 ILE A 99 -70.43 -54.26 REMARK 500 GLU A 122 -70.10 -76.79 REMARK 500 TYR A 128 -57.83 -128.05 REMARK 500 ARG A 129 0.36 -56.36 REMARK 500 ALA A 147 -71.53 -56.21 REMARK 500 ARG A 192 -1.39 88.34 REMARK 500 THR A 204 -74.11 -60.18 REMARK 500 ASP A 206 41.90 73.73 REMARK 500 ASP A 207 -13.35 66.74 REMARK 500 ALA A 222 -72.01 -58.50 REMARK 500 PRO A 234 -161.50 -44.30 REMARK 500 TRP A 235 -38.93 -21.91 REMARK 500 ALA A 257 -62.18 -104.37 REMARK 500 VAL A 258 -16.26 -48.47 REMARK 500 ALA A 269 -53.99 -120.01 REMARK 500 LEU A 271 74.08 57.90 REMARK 500 VAL A 308 -71.05 -56.81 REMARK 500 VAL A 339 -70.39 -48.11 REMARK 500 SER A 351 -85.57 -118.87 REMARK 500 LEU A 363 -76.83 -107.35 REMARK 500 ARG A 369 -60.62 -128.54 REMARK 500 SER A 388 -71.66 -52.16 REMARK 500 LEU A 389 -70.68 -54.54 REMARK 500 ALA A 397 -79.82 -105.85 REMARK 500 SER A 399 72.53 57.81 REMARK 500 VAL A 403 -76.97 -63.72 REMARK 500 LEU B 39 75.20 41.83 REMARK 500 ARG B 72 -72.04 -55.66 REMARK 500 THR B 93 -77.33 -122.78 REMARK 500 ALA B 96 -72.31 -50.75 REMARK 500 LEU B 145 -70.11 -52.62 REMARK 500 ALA B 147 -71.90 -55.46 REMARK 500 PRO B 182 -173.50 -67.79 REMARK 500 ARG B 192 -3.35 84.38 REMARK 500 GLU B 194 -12.68 -43.73 REMARK 500 THR B 204 -65.16 -101.90 REMARK 500 ASP B 206 70.10 65.75 REMARK 500 ASP B 207 -15.69 70.31 REMARK 500 SER B 233 -156.79 -118.01 REMARK 500 PRO B 234 -147.18 -58.24 REMARK 500 TRP B 235 -36.73 -27.15 REMARK 500 ALA B 267 -61.92 -91.27 REMARK 500 LEU B 271 74.79 55.11 REMARK 500 LYS B 300 -72.33 -54.46 REMARK 500 ILE B 301 -74.07 -75.49 REMARK 500 ASP B 302 -177.05 -171.79 REMARK 500 LYS B 304 -64.65 -129.97 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 234 TRP A 235 -114.93 REMARK 500 THR A 400 GLU A 401 148.90 REMARK 500 ASP B 206 ASP B 207 148.65 REMARK 500 SER B 233 PRO B 234 -143.59 REMARK 500 PRO B 234 TRP B 235 -126.43 REMARK 500 SER B 399 THR B 400 -149.18 REMARK 500 PRO B 423 GLU B 424 133.70 REMARK 500 REMARK 500 REMARK: NULL DBREF1 4LDS A 1 446 UNP GLCP_STAES DBREF2 4LDS A A0A0H2VG78 1 446 DBREF1 4LDS B 1 446 UNP GLCP_STAES DBREF2 4LDS B A0A0H2VG78 1 446 SEQRES 1 A 446 MET LYS ALA ASN LYS TYR LEU ILE PHE ILE LEU GLY ALA SEQRES 2 A 446 LEU GLY GLY LEU LEU TYR GLY TYR ASP ASN GLY VAL ILE SEQRES 3 A 446 SER GLY ALA LEU LEU PHE ILE HIS LYS ASP ILE PRO LEU SEQRES 4 A 446 ASN SER THR THR GLU GLY ILE VAL VAL SER SER MET LEU SEQRES 5 A 446 ILE GLY ALA ILE VAL GLY ALA GLY SER SER GLY PRO LEU SEQRES 6 A 446 ALA ASP LYS LEU GLY ARG ARG ARG LEU VAL MET LEU ILE SEQRES 7 A 446 ALA ILE VAL PHE ILE ILE GLY ALA LEU ILE LEU ALA ALA SEQRES 8 A 446 SER THR ASN LEU ALA LEU LEU ILE ILE GLY ARG LEU ILE SEQRES 9 A 446 ILE GLY LEU ALA VAL GLY GLY SER MET SER THR VAL PRO SEQRES 10 A 446 VAL TYR LEU SER GLU MET ALA PRO THR GLU TYR ARG GLY SEQRES 11 A 446 SER LEU GLY SER LEU ASN GLN LEU MET ILE THR ILE GLY SEQRES 12 A 446 ILE LEU ALA ALA TYR LEU VAL ASN TYR ALA PHE ALA ASP SEQRES 13 A 446 ILE GLU GLY TRP ARG TRP MET LEU GLY LEU ALA VAL VAL SEQRES 14 A 446 PRO SER VAL ILE LEU LEU VAL GLY ILE TYR PHE MET PRO SEQRES 15 A 446 GLU SER PRO ARG TRP LEU LEU GLU ASN ARG ASN GLU GLU SEQRES 16 A 446 ALA ALA ARG GLN VAL MET LYS ILE THR TYR ASP ASP SER SEQRES 17 A 446 GLU ILE ASP LYS GLU LEU LYS GLU MET LYS GLU ILE ASN SEQRES 18 A 446 ALA ILE SER GLU SER THR TRP THR VAL ILE LYS SER PRO SEQRES 19 A 446 TRP LEU GLY ARG ILE LEU ILE VAL GLY CYS ILE PHE ALA SEQRES 20 A 446 ILE PHE GLN GLN PHE ILE GLY ILE ASN ALA VAL ILE PHE SEQRES 21 A 446 TYR SER SER SER ILE PHE ALA LYS ALA GLY LEU GLY GLU SEQRES 22 A 446 ALA ALA SER ILE LEU GLY SER VAL GLY ILE GLY THR ILE SEQRES 23 A 446 ASN VAL LEU VAL THR ILE VAL ALA ILE PHE VAL VAL ASP SEQRES 24 A 446 LYS ILE ASP ARG LYS LYS LEU LEU VAL GLY GLY ASN ILE SEQRES 25 A 446 GLY MET ILE ALA SER LEU LEU ILE MET ALA ILE LEU ILE SEQRES 26 A 446 TRP THR ILE GLY ILE ALA SER SER ALA TRP ILE ILE ILE SEQRES 27 A 446 VAL CYS LEU SER LEU PHE ILE VAL PHE PHE GLY ILE SER SEQRES 28 A 446 TRP GLY PRO VAL LEU TRP VAL MET LEU PRO GLU LEU PHE SEQRES 29 A 446 PRO MET ARG ALA ARG GLY ALA ALA THR GLY ILE SER ALA SEQRES 30 A 446 LEU VAL LEU ASN ILE GLY THR LEU ILE VAL SER LEU PHE SEQRES 31 A 446 PHE PRO ILE LEU SER ASP ALA LEU SER THR GLU TRP VAL SEQRES 32 A 446 PHE LEU ILE PHE ALA PHE ILE GLY VAL LEU ALA MET ILE SEQRES 33 A 446 PHE VAL ILE LYS PHE LEU PRO GLU THR ARG GLY ARG SER SEQRES 34 A 446 LEU GLU GLU ILE GLU TYR GLU LEU ARG GLU ARG THR GLY SEQRES 35 A 446 ALA ARG THR GLU SEQRES 1 B 446 MET LYS ALA ASN LYS TYR LEU ILE PHE ILE LEU GLY ALA SEQRES 2 B 446 LEU GLY GLY LEU LEU TYR GLY TYR ASP ASN GLY VAL ILE SEQRES 3 B 446 SER GLY ALA LEU LEU PHE ILE HIS LYS ASP ILE PRO LEU SEQRES 4 B 446 ASN SER THR THR GLU GLY ILE VAL VAL SER SER MET LEU SEQRES 5 B 446 ILE GLY ALA ILE VAL GLY ALA GLY SER SER GLY PRO LEU SEQRES 6 B 446 ALA ASP LYS LEU GLY ARG ARG ARG LEU VAL MET LEU ILE SEQRES 7 B 446 ALA ILE VAL PHE ILE ILE GLY ALA LEU ILE LEU ALA ALA SEQRES 8 B 446 SER THR ASN LEU ALA LEU LEU ILE ILE GLY ARG LEU ILE SEQRES 9 B 446 ILE GLY LEU ALA VAL GLY GLY SER MET SER THR VAL PRO SEQRES 10 B 446 VAL TYR LEU SER GLU MET ALA PRO THR GLU TYR ARG GLY SEQRES 11 B 446 SER LEU GLY SER LEU ASN GLN LEU MET ILE THR ILE GLY SEQRES 12 B 446 ILE LEU ALA ALA TYR LEU VAL ASN TYR ALA PHE ALA ASP SEQRES 13 B 446 ILE GLU GLY TRP ARG TRP MET LEU GLY LEU ALA VAL VAL SEQRES 14 B 446 PRO SER VAL ILE LEU LEU VAL GLY ILE TYR PHE MET PRO SEQRES 15 B 446 GLU SER PRO ARG TRP LEU LEU GLU ASN ARG ASN GLU GLU SEQRES 16 B 446 ALA ALA ARG GLN VAL MET LYS ILE THR TYR ASP ASP SER SEQRES 17 B 446 GLU ILE ASP LYS GLU LEU LYS GLU MET LYS GLU ILE ASN SEQRES 18 B 446 ALA ILE SER GLU SER THR TRP THR VAL ILE LYS SER PRO SEQRES 19 B 446 TRP LEU GLY ARG ILE LEU ILE VAL GLY CYS ILE PHE ALA SEQRES 20 B 446 ILE PHE GLN GLN PHE ILE GLY ILE ASN ALA VAL ILE PHE SEQRES 21 B 446 TYR SER SER SER ILE PHE ALA LYS ALA GLY LEU GLY GLU SEQRES 22 B 446 ALA ALA SER ILE LEU GLY SER VAL GLY ILE GLY THR ILE SEQRES 23 B 446 ASN VAL LEU VAL THR ILE VAL ALA ILE PHE VAL VAL ASP SEQRES 24 B 446 LYS ILE ASP ARG LYS LYS LEU LEU VAL GLY GLY ASN ILE SEQRES 25 B 446 GLY MET ILE ALA SER LEU LEU ILE MET ALA ILE LEU ILE SEQRES 26 B 446 TRP THR ILE GLY ILE ALA SER SER ALA TRP ILE ILE ILE SEQRES 27 B 446 VAL CYS LEU SER LEU PHE ILE VAL PHE PHE GLY ILE SER SEQRES 28 B 446 TRP GLY PRO VAL LEU TRP VAL MET LEU PRO GLU LEU PHE SEQRES 29 B 446 PRO MET ARG ALA ARG GLY ALA ALA THR GLY ILE SER ALA SEQRES 30 B 446 LEU VAL LEU ASN ILE GLY THR LEU ILE VAL SER LEU PHE SEQRES 31 B 446 PHE PRO ILE LEU SER ASP ALA LEU SER THR GLU TRP VAL SEQRES 32 B 446 PHE LEU ILE PHE ALA PHE ILE GLY VAL LEU ALA MET ILE SEQRES 33 B 446 PHE VAL ILE LYS PHE LEU PRO GLU THR ARG GLY ARG SER SEQRES 34 B 446 LEU GLU GLU ILE GLU TYR GLU LEU ARG GLU ARG THR GLY SEQRES 35 B 446 ALA ARG THR GLU HELIX 1 1 LEU A 7 ILE A 33 1 27 HELIX 2 2 HIS A 34 ASP A 36 5 3 HELIX 3 3 ASN A 40 SER A 61 1 22 HELIX 4 4 SER A 61 LEU A 69 1 9 HELIX 5 5 ARG A 71 LEU A 89 1 19 HELIX 6 6 LEU A 95 ALA A 124 1 30 HELIX 7 7 LEU A 132 TYR A 152 1 21 HELIX 8 8 ASP A 156 PHE A 180 1 25 HELIX 9 9 SER A 184 ASN A 191 1 8 HELIX 10 10 GLU A 194 ASP A 206 1 13 HELIX 11 11 GLU A 209 TRP A 228 1 20 HELIX 12 12 TRP A 235 PHE A 252 1 18 HELIX 13 13 GLY A 254 ILE A 259 1 6 HELIX 14 14 ILE A 259 ALA A 269 1 11 HELIX 15 15 GLU A 273 LEU A 278 1 6 HELIX 16 16 GLY A 279 VAL A 297 1 19 HELIX 17 17 ARG A 303 THR A 327 1 25 HELIX 18 18 GLY A 329 SER A 351 1 23 HELIX 19 19 PRO A 354 LEU A 360 1 7 HELIX 20 20 ARG A 369 PHE A 391 1 23 HELIX 21 21 PRO A 392 ALA A 397 5 6 HELIX 22 22 GLU A 401 PHE A 421 1 21 HELIX 23 23 ILE B 8 ILE B 26 1 19 HELIX 24 24 GLY B 28 ILE B 33 1 6 HELIX 25 25 HIS B 34 ILE B 37 5 4 HELIX 26 26 SER B 41 SER B 61 1 21 HELIX 27 27 SER B 61 GLY B 70 1 10 HELIX 28 28 ARG B 71 LEU B 89 1 19 HELIX 29 29 ASN B 94 ALA B 124 1 31 HELIX 30 30 PRO B 125 ARG B 129 5 5 HELIX 31 31 GLY B 130 PHE B 154 1 25 HELIX 32 32 ASP B 156 TRP B 160 5 5 HELIX 33 33 ARG B 161 LEU B 174 1 14 HELIX 34 34 LEU B 174 PHE B 180 1 7 HELIX 35 35 SER B 184 ARG B 192 1 9 HELIX 36 36 GLU B 194 TYR B 205 1 12 HELIX 37 37 GLU B 209 TRP B 228 1 20 HELIX 38 38 THR B 229 ILE B 231 5 3 HELIX 39 39 TRP B 235 ILE B 253 1 19 HELIX 40 40 GLY B 254 ALA B 269 1 16 HELIX 41 41 GLU B 273 LYS B 300 1 28 HELIX 42 42 LYS B 304 THR B 327 1 24 HELIX 43 43 ALA B 331 SER B 351 1 21 HELIX 44 44 GLY B 353 PHE B 364 1 12 HELIX 45 45 ARG B 369 SER B 395 1 27 HELIX 46 46 GLU B 401 PHE B 409 1 9 HELIX 47 47 PHE B 409 LEU B 422 1 14 CISPEP 1 LEU A 39 ASN A 40 0 16.85 CISPEP 2 LEU B 39 ASN B 40 0 21.40 CRYST1 130.070 118.850 160.049 90.00 100.08 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007688 0.000000 0.001367 0.00000 SCALE2 0.000000 0.008414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006346 0.00000