data_4LKJ # _entry.id 4LKJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LKJ pdb_00004lkj 10.2210/pdb4lkj/pdb RCSB RCSB080744 ? ? WWPDB D_1000080744 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4LKG . unspecified PDB 4LKH . unspecified PDB 4LKI . unspecified PDB 4LKK . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LKJ _pdbx_database_status.recvd_initial_deposition_date 2013-07-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, Y.' 1 'Zhang, W.' 2 'Wang, F.' 3 'Qi, J.' 4 'Song, H.' 5 'Wu, Y.' 6 'Gao, F.' 7 'Zhang, Y.' 8 'Fan, Z.' 9 'Gong, W.' 10 'Wang, D.' 11 'Shu, Y.' 12 'Wang, Y.' 13 'Yan, J.' 14 'Gao, G.F.' 15 # _citation.id primary _citation.title 'Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses' _citation.journal_abbrev Science _citation.journal_volume 342 _citation.page_first 243 _citation.page_last 247 _citation.year 2013 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24009358 _citation.pdbx_database_id_DOI 10.1126/science.1242917 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, Y.' 1 ? primary 'Zhang, W.' 2 ? primary 'Wang, F.' 3 ? primary 'Qi, J.' 4 ? primary 'Wu, Y.' 5 ? primary 'Song, H.' 6 ? primary 'Gao, F.' 7 ? primary 'Bi, Y.' 8 ? primary 'Zhang, Y.' 9 ? primary 'Fan, Z.' 10 ? primary 'Qin, C.' 11 ? primary 'Sun, H.' 12 ? primary 'Liu, J.' 13 ? primary 'Haywood, J.' 14 ? primary 'Liu, W.' 15 ? primary 'Gong, W.' 16 ? primary 'Wang, D.' 17 ? primary 'Shu, Y.' 18 ? primary 'Wang, Y.' 19 ? primary 'Yan, J.' 20 ? primary 'Gao, G.F.' 21 ? # _cell.entry_id 4LKJ _cell.length_a 116.909 _cell.length_b 116.909 _cell.length_c 297.076 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LKJ _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man hemagglutinin 34210.562 1 ? ? ? ? 2 polymer man hemagglutinin 19433.254 1 ? ? ? ? 3 branched man 'N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 674.604 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 5 water nat water 18.015 32 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name "3'-sialyl-N-acetyllactosamine" # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERRE GSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNT RKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLMLNPNDTVTFSFNGAF IAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPE ; ;ICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERRE GSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNT RKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLMLNPNDTVTFSFNGAF IAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPE ; A ? 2 'polypeptide(L)' no no ;LFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNVI NWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSK YREEAMQN ; ;LFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNVI NWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSK YREEAMQN ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 CYS n 1 3 LEU n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 ALA n 1 8 VAL n 1 9 SER n 1 10 ASN n 1 11 GLY n 1 12 THR n 1 13 LYS n 1 14 VAL n 1 15 ASN n 1 16 THR n 1 17 LEU n 1 18 THR n 1 19 GLU n 1 20 ARG n 1 21 GLY n 1 22 VAL n 1 23 GLU n 1 24 VAL n 1 25 VAL n 1 26 ASN n 1 27 ALA n 1 28 THR n 1 29 GLU n 1 30 THR n 1 31 VAL n 1 32 GLU n 1 33 ARG n 1 34 THR n 1 35 ASN n 1 36 ILE n 1 37 PRO n 1 38 ARG n 1 39 ILE n 1 40 CYS n 1 41 SER n 1 42 LYS n 1 43 GLY n 1 44 LYS n 1 45 ARG n 1 46 THR n 1 47 VAL n 1 48 ASP n 1 49 LEU n 1 50 GLY n 1 51 GLN n 1 52 CYS n 1 53 GLY n 1 54 LEU n 1 55 LEU n 1 56 GLY n 1 57 THR n 1 58 ILE n 1 59 THR n 1 60 GLY n 1 61 PRO n 1 62 PRO n 1 63 GLN n 1 64 CYS n 1 65 ASP n 1 66 GLN n 1 67 PHE n 1 68 LEU n 1 69 GLU n 1 70 PHE n 1 71 SER n 1 72 ALA n 1 73 ASP n 1 74 LEU n 1 75 ILE n 1 76 ILE n 1 77 GLU n 1 78 ARG n 1 79 ARG n 1 80 GLU n 1 81 GLY n 1 82 SER n 1 83 ASP n 1 84 VAL n 1 85 CYS n 1 86 TYR n 1 87 PRO n 1 88 GLY n 1 89 LYS n 1 90 PHE n 1 91 VAL n 1 92 ASN n 1 93 GLU n 1 94 GLU n 1 95 ALA n 1 96 LEU n 1 97 ARG n 1 98 GLN n 1 99 ILE n 1 100 LEU n 1 101 ARG n 1 102 GLU n 1 103 SER n 1 104 GLY n 1 105 GLY n 1 106 ILE n 1 107 ASP n 1 108 LYS n 1 109 GLU n 1 110 ALA n 1 111 MET n 1 112 GLY n 1 113 PHE n 1 114 THR n 1 115 TYR n 1 116 SER n 1 117 GLY n 1 118 ILE n 1 119 ARG n 1 120 THR n 1 121 ASN n 1 122 GLY n 1 123 ALA n 1 124 THR n 1 125 SER n 1 126 ALA n 1 127 CYS n 1 128 ARG n 1 129 ARG n 1 130 SER n 1 131 GLY n 1 132 SER n 1 133 SER n 1 134 PHE n 1 135 TYR n 1 136 ALA n 1 137 GLU n 1 138 MET n 1 139 LYS n 1 140 TRP n 1 141 LEU n 1 142 LEU n 1 143 SER n 1 144 ASN n 1 145 THR n 1 146 ASP n 1 147 ASN n 1 148 ALA n 1 149 ALA n 1 150 PHE n 1 151 PRO n 1 152 GLN n 1 153 MET n 1 154 THR n 1 155 LYS n 1 156 SER n 1 157 TYR n 1 158 LYS n 1 159 ASN n 1 160 THR n 1 161 ARG n 1 162 LYS n 1 163 SER n 1 164 PRO n 1 165 ALA n 1 166 LEU n 1 167 ILE n 1 168 VAL n 1 169 TRP n 1 170 GLY n 1 171 ILE n 1 172 HIS n 1 173 HIS n 1 174 SER n 1 175 VAL n 1 176 SER n 1 177 THR n 1 178 ALA n 1 179 GLU n 1 180 GLN n 1 181 THR n 1 182 LYS n 1 183 LEU n 1 184 TYR n 1 185 GLY n 1 186 SER n 1 187 GLY n 1 188 ASN n 1 189 LYS n 1 190 LEU n 1 191 VAL n 1 192 THR n 1 193 VAL n 1 194 GLY n 1 195 SER n 1 196 SER n 1 197 ASN n 1 198 TYR n 1 199 GLN n 1 200 GLN n 1 201 SER n 1 202 PHE n 1 203 VAL n 1 204 PRO n 1 205 SER n 1 206 PRO n 1 207 GLY n 1 208 ALA n 1 209 ARG n 1 210 PRO n 1 211 GLN n 1 212 VAL n 1 213 ASN n 1 214 GLY n 1 215 GLN n 1 216 SER n 1 217 GLY n 1 218 ARG n 1 219 ILE n 1 220 ASP n 1 221 PHE n 1 222 HIS n 1 223 TRP n 1 224 LEU n 1 225 MET n 1 226 LEU n 1 227 ASN n 1 228 PRO n 1 229 ASN n 1 230 ASP n 1 231 THR n 1 232 VAL n 1 233 THR n 1 234 PHE n 1 235 SER n 1 236 PHE n 1 237 ASN n 1 238 GLY n 1 239 ALA n 1 240 PHE n 1 241 ILE n 1 242 ALA n 1 243 PRO n 1 244 ASP n 1 245 ARG n 1 246 ALA n 1 247 SER n 1 248 PHE n 1 249 LEU n 1 250 ARG n 1 251 GLY n 1 252 LYS n 1 253 SER n 1 254 MET n 1 255 GLY n 1 256 ILE n 1 257 GLN n 1 258 SER n 1 259 GLY n 1 260 VAL n 1 261 GLN n 1 262 VAL n 1 263 ASP n 1 264 ALA n 1 265 ASN n 1 266 CYS n 1 267 GLU n 1 268 GLY n 1 269 ASP n 1 270 CYS n 1 271 TYR n 1 272 HIS n 1 273 SER n 1 274 GLY n 1 275 GLY n 1 276 THR n 1 277 ILE n 1 278 ILE n 1 279 SER n 1 280 ASN n 1 281 LEU n 1 282 PRO n 1 283 PHE n 1 284 GLN n 1 285 ASN n 1 286 ILE n 1 287 ASP n 1 288 SER n 1 289 ARG n 1 290 ALA n 1 291 VAL n 1 292 GLY n 1 293 LYS n 1 294 CYS n 1 295 PRO n 1 296 ARG n 1 297 TYR n 1 298 VAL n 1 299 LYS n 1 300 GLN n 1 301 ARG n 1 302 SER n 1 303 LEU n 1 304 LEU n 1 305 LEU n 1 306 ALA n 1 307 THR n 1 308 GLY n 1 309 MET n 1 310 LYS n 1 311 ASN n 1 312 VAL n 1 313 PRO n 1 314 GLU n 2 1 LEU n 2 2 PHE n 2 3 GLY n 2 4 ALA n 2 5 ILE n 2 6 ALA n 2 7 GLY n 2 8 PHE n 2 9 ILE n 2 10 GLU n 2 11 ASN n 2 12 GLY n 2 13 TRP n 2 14 GLU n 2 15 GLY n 2 16 LEU n 2 17 ILE n 2 18 ASP n 2 19 GLY n 2 20 TRP n 2 21 TYR n 2 22 GLY n 2 23 PHE n 2 24 ARG n 2 25 HIS n 2 26 GLN n 2 27 ASN n 2 28 ALA n 2 29 GLN n 2 30 GLY n 2 31 GLU n 2 32 GLY n 2 33 THR n 2 34 ALA n 2 35 ALA n 2 36 ASP n 2 37 TYR n 2 38 LYS n 2 39 SER n 2 40 THR n 2 41 GLN n 2 42 SER n 2 43 ALA n 2 44 ILE n 2 45 ASP n 2 46 GLN n 2 47 ILE n 2 48 THR n 2 49 GLY n 2 50 LYS n 2 51 LEU n 2 52 ASN n 2 53 ARG n 2 54 LEU n 2 55 ILE n 2 56 GLU n 2 57 LYS n 2 58 THR n 2 59 ASN n 2 60 GLN n 2 61 GLN n 2 62 PHE n 2 63 GLU n 2 64 LEU n 2 65 ILE n 2 66 ASP n 2 67 ASN n 2 68 GLU n 2 69 PHE n 2 70 ASN n 2 71 GLU n 2 72 VAL n 2 73 GLU n 2 74 LYS n 2 75 GLN n 2 76 ILE n 2 77 GLY n 2 78 ASN n 2 79 VAL n 2 80 ILE n 2 81 ASN n 2 82 TRP n 2 83 THR n 2 84 ARG n 2 85 ASP n 2 86 SER n 2 87 ILE n 2 88 THR n 2 89 GLU n 2 90 VAL n 2 91 TRP n 2 92 SER n 2 93 TYR n 2 94 ASN n 2 95 ALA n 2 96 GLU n 2 97 LEU n 2 98 LEU n 2 99 VAL n 2 100 ALA n 2 101 MET n 2 102 GLU n 2 103 ASN n 2 104 GLN n 2 105 HIS n 2 106 THR n 2 107 ILE n 2 108 ASP n 2 109 LEU n 2 110 ALA n 2 111 ASP n 2 112 SER n 2 113 GLU n 2 114 MET n 2 115 ASP n 2 116 LYS n 2 117 LEU n 2 118 TYR n 2 119 GLU n 2 120 ARG n 2 121 VAL n 2 122 LYS n 2 123 ARG n 2 124 GLN n 2 125 LEU n 2 126 ARG n 2 127 GLU n 2 128 ASN n 2 129 ALA n 2 130 GLU n 2 131 GLU n 2 132 ASP n 2 133 GLY n 2 134 THR n 2 135 GLY n 2 136 CYS n 2 137 PHE n 2 138 GLU n 2 139 ILE n 2 140 PHE n 2 141 HIS n 2 142 LYS n 2 143 CYS n 2 144 ASP n 2 145 ASP n 2 146 ASP n 2 147 CYS n 2 148 MET n 2 149 ALA n 2 150 SER n 2 151 ILE n 2 152 ARG n 2 153 ASN n 2 154 ASN n 2 155 THR n 2 156 TYR n 2 157 ASP n 2 158 HIS n 2 159 SER n 2 160 LYS n 2 161 TYR n 2 162 ARG n 2 163 GLU n 2 164 GLU n 2 165 ALA n 2 166 MET n 2 167 GLN n 2 168 ASN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? A/Anhui/1/2013 ? ? ? ? 'Influenza A virus' 11320 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? HI5 ? ? ? ? ? baculovirus ? ? ? pFastbac1 ? ? 2 1 sample ? ? ? ? ? ? ? A/Anhui/1/2013 ? ? ? ? 'Influenza A virus' 11320 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? HI5 ? ? ? ? ? baculovirus ? ? ? pFastbac1 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 4LKJ 4LKJ 1 ? ? ? 2 PDB 4LKJ 4LKJ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LKJ A 1 ? 314 ? 4LKJ 3 ? 316 ? 3 316 2 2 4LKJ B 1 ? 168 ? 4LKJ 323 ? 490 ? 323 490 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LKJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.64 _exptl_crystal.density_percent_sol 66.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '16%(w/v) Polyethylene glycol 3350, 0.2M lithium sulfate, 0.1M Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-06-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 4LKJ _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.7980 _reflns.number_obs 19499 _reflns.number_all 19702 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 72.220 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4LKJ _refine.ls_number_reflns_obs 19491 _refine.ls_number_reflns_all 19491 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.781 _refine.ls_d_res_high 2.798 _refine.ls_percent_reflns_obs 98.96 _refine.ls_R_factor_obs 0.2394 _refine.ls_R_factor_all 0.2394 _refine.ls_R_factor_R_work 0.2370 _refine.ls_R_factor_R_free 0.2849 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.09 _refine.ls_number_reflns_R_free 993 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 96.2352 _refine.aniso_B[1][1] 4.9479 _refine.aniso_B[2][2] 4.9479 _refine.aniso_B[3][3] -9.8959 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.252 _refine.solvent_model_param_bsol 37.668 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 4DJ6 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.45 _refine.overall_FOM_work_R_set 0.7481 _refine.B_iso_max 220.830 _refine.B_iso_min 31.510 _refine.pdbx_overall_phase_error 31.0800 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3760 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 88 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 3880 _refine_hist.d_res_high 2.798 _refine_hist.d_res_low 37.781 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 3929 0.005 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 5306 0.943 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 585 0.201 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 694 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1456 18.039 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.7976 2.9451 7 100.0000 2626 . 0.3298 0.4060 . 130 . 2756 . 'X-RAY DIFFRACTION' . 2.9451 3.1295 7 100.0000 2611 . 0.3188 0.3905 . 168 . 2779 . 'X-RAY DIFFRACTION' . 3.1295 3.3710 7 100.0000 2647 . 0.2940 0.3586 . 133 . 2780 . 'X-RAY DIFFRACTION' . 3.3710 3.7099 7 100.0000 2645 . 0.2539 0.3175 . 139 . 2784 . 'X-RAY DIFFRACTION' . 3.7099 4.2462 7 99.0000 2618 . 0.2270 0.2648 . 151 . 2769 . 'X-RAY DIFFRACTION' . 4.2462 5.3473 7 97.0000 2624 . 0.1907 0.2517 . 142 . 2766 . 'X-RAY DIFFRACTION' . 5.3473 37.7844 7 97.0000 2727 . 0.2241 0.2418 . 130 . 2857 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4LKJ _struct.title ;The structure of hemagglutinin L226Q mutant (H3 numbering) from a avian-origin H7N9 influenza virus (A/Anhui/1/2013) in complex with avian receptor analog 3'SLNLN ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LKJ _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'homotrimer, virus attachment, membrane fusion, Viral Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 55 ? GLY A 60 ? LEU A 57 GLY A 62 1 ? 6 HELX_P HELX_P2 2 PRO A 61 ? ASP A 65 ? PRO A 63 ASP A 67 5 ? 5 HELX_P HELX_P3 3 ASN A 92 ? GLU A 102 ? ASN A 94 GLU A 104 1 ? 11 HELX_P HELX_P4 4 SER A 176 ? GLY A 185 ? SER A 178 GLY A 187 1 ? 10 HELX_P HELX_P5 5 ASP B 36 ? ILE B 55 ? ASP B 358 ILE B 377 1 ? 20 HELX_P HELX_P6 6 GLU B 73 ? LEU B 125 ? GLU B 395 LEU B 447 1 ? 53 HELX_P HELX_P7 7 ASP B 144 ? ASN B 153 ? ASP B 466 ASN B 475 1 ? 10 HELX_P HELX_P8 8 TYR B 161 ? ASN B 168 ? TYR B 483 ASN B 490 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 B CYS 136 SG ? ? A CYS 4 B CYS 458 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 266 SG ? ? A CYS 42 A CYS 268 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 54 A CYS 66 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 87 A CYS 129 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 270 SG ? ? ? 1_555 A CYS 294 SG ? ? A CYS 272 A CYS 296 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf6 disulf ? ? B CYS 143 SG ? ? ? 1_555 B CYS 147 SG ? ? B CYS 465 B CYS 469 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 26 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 28 A NAG 601 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 229 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 231 A NAG 602 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale one ? B ASN 81 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 403 B NAG 501 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale4 covale both ? C NAG . O4 ? ? ? 1_555 C GAL . C1 ? ? C NAG 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.429 ? ? covale5 covale both ? C GAL . O3 ? ? ? 1_555 C SIA . C2 ? ? C GAL 2 C SIA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 3 ? E ? 2 ? F ? 3 ? G ? 5 ? H ? 2 ? I ? 2 ? J ? 4 ? K ? 3 ? L ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel E 1 2 ? parallel F 1 2 ? parallel F 2 3 ? parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel L 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 2 ? HIS A 5 ? CYS A 4 HIS A 7 A 2 TYR B 21 ? ARG B 24 ? TYR B 343 ARG B 346 B 1 THR A 12 ? ASN A 15 ? THR A 14 ASN A 17 B 2 ARG A 20 ? VAL A 24 ? ARG A 22 VAL A 26 C 1 ALA A 27 ? GLU A 29 ? ALA A 29 GLU A 31 C 2 LEU A 304 ? ALA A 306 ? LEU A 306 ALA A 308 D 1 VAL A 31 ? GLU A 32 ? VAL A 33 GLU A 34 D 2 PHE A 283 ? GLN A 284 ? PHE A 285 GLN A 286 D 3 ARG A 296 ? TYR A 297 ? ARG A 298 TYR A 299 E 1 ILE A 39 ? CYS A 40 ? ILE A 41 CYS A 42 E 2 VAL A 262 ? ASP A 263 ? VAL A 264 ASP A 265 F 1 THR A 46 ? ASP A 48 ? THR A 48 ASP A 50 F 2 LEU A 74 ? GLU A 77 ? LEU A 76 GLU A 79 F 3 MET A 254 ? GLN A 257 ? MET A 256 GLN A 259 G 1 GLY A 88 ? PHE A 90 ? GLY A 90 PHE A 92 G 2 ARG A 218 ? LEU A 226 ? ARG A 220 LEU A 228 G 3 ALA A 165 ? HIS A 173 ? ALA A 167 HIS A 175 G 4 PHE A 240 ? PRO A 243 ? PHE A 242 PRO A 245 G 5 MET A 138 ? TRP A 140 ? MET A 140 TRP A 142 H 1 ILE A 106 ? ALA A 110 ? ILE A 108 ALA A 112 H 2 ARG A 245 ? LEU A 249 ? ARG A 247 LEU A 251 I 1 THR A 124 ? ARG A 128 ? THR A 126 ARG A 130 I 2 SER A 132 ? SER A 133 ? SER A 134 SER A 135 J 1 MET A 153 ? LYS A 158 ? MET A 155 LYS A 160 J 2 THR A 231 ? PHE A 236 ? THR A 233 PHE A 238 J 3 VAL A 191 ? GLY A 194 ? VAL A 193 GLY A 196 J 4 GLN A 199 ? PHE A 202 ? GLN A 201 PHE A 204 K 1 GLY A 275 ? THR A 276 ? GLY A 277 THR A 278 K 2 CYS A 270 ? HIS A 272 ? CYS A 272 HIS A 274 K 3 VAL A 291 ? GLY A 292 ? VAL A 293 GLY A 294 L 1 ALA B 129 ? GLU B 131 ? ALA B 451 GLU B 453 L 2 PHE B 137 ? ILE B 139 ? PHE B 459 ILE B 461 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 2 ? N CYS A 4 O ARG B 24 ? O ARG B 346 B 1 2 N VAL A 14 ? N VAL A 16 O VAL A 22 ? O VAL A 24 C 1 2 N THR A 28 ? N THR A 30 O LEU A 305 ? O LEU A 307 D 1 2 N GLU A 32 ? N GLU A 34 O PHE A 283 ? O PHE A 285 D 2 3 N GLN A 284 ? N GLN A 286 O ARG A 296 ? O ARG A 298 E 1 2 N ILE A 39 ? N ILE A 41 O ASP A 263 ? O ASP A 265 F 1 2 N VAL A 47 ? N VAL A 49 O ILE A 76 ? O ILE A 78 F 2 3 N ILE A 75 ? N ILE A 77 O ILE A 256 ? O ILE A 258 G 1 2 N LYS A 89 ? N LYS A 91 O PHE A 221 ? O PHE A 223 G 2 3 O ARG A 218 ? O ARG A 220 N HIS A 173 ? N HIS A 175 G 3 4 N GLY A 170 ? N GLY A 172 O ILE A 241 ? O ILE A 243 G 4 5 O ALA A 242 ? O ALA A 244 N LYS A 139 ? N LYS A 141 H 1 2 N GLU A 109 ? N GLU A 111 O ALA A 246 ? O ALA A 248 I 1 2 N CYS A 127 ? N CYS A 129 O SER A 133 ? O SER A 135 J 1 2 N LYS A 155 ? N LYS A 157 O PHE A 234 ? O PHE A 236 J 2 3 O SER A 235 ? O SER A 237 N THR A 192 ? N THR A 194 J 3 4 N VAL A 191 ? N VAL A 193 O PHE A 202 ? O PHE A 204 K 1 2 O GLY A 275 ? O GLY A 277 N HIS A 272 ? N HIS A 274 K 2 3 N TYR A 271 ? N TYR A 273 O VAL A 291 ? O VAL A 293 L 1 2 N GLU B 130 ? N GLU B 452 O GLU B 138 ? O GLU B 460 # _database_PDB_matrix.entry_id 4LKJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4LKJ _atom_sites.fract_transf_matrix[1][1] 0.008554 _atom_sites.fract_transf_matrix[1][2] 0.004938 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009877 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003366 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 3 3 ILE ILE A . n A 1 2 CYS 2 4 4 CYS CYS A . n A 1 3 LEU 3 5 5 LEU LEU A . n A 1 4 GLY 4 6 6 GLY GLY A . n A 1 5 HIS 5 7 7 HIS HIS A . n A 1 6 HIS 6 8 8 HIS HIS A . n A 1 7 ALA 7 9 9 ALA ALA A . n A 1 8 VAL 8 10 10 VAL VAL A . n A 1 9 SER 9 11 11 SER SER A . n A 1 10 ASN 10 12 12 ASN ASN A . n A 1 11 GLY 11 13 13 GLY GLY A . n A 1 12 THR 12 14 14 THR THR A . n A 1 13 LYS 13 15 15 LYS LYS A . n A 1 14 VAL 14 16 16 VAL VAL A . n A 1 15 ASN 15 17 17 ASN ASN A . n A 1 16 THR 16 18 18 THR THR A . n A 1 17 LEU 17 19 19 LEU LEU A . n A 1 18 THR 18 20 20 THR THR A . n A 1 19 GLU 19 21 21 GLU GLU A . n A 1 20 ARG 20 22 22 ARG ARG A . n A 1 21 GLY 21 23 23 GLY GLY A . n A 1 22 VAL 22 24 24 VAL VAL A . n A 1 23 GLU 23 25 25 GLU GLU A . n A 1 24 VAL 24 26 26 VAL VAL A . n A 1 25 VAL 25 27 27 VAL VAL A . n A 1 26 ASN 26 28 28 ASN ASN A . n A 1 27 ALA 27 29 29 ALA ALA A . n A 1 28 THR 28 30 30 THR THR A . n A 1 29 GLU 29 31 31 GLU GLU A . n A 1 30 THR 30 32 32 THR THR A . n A 1 31 VAL 31 33 33 VAL VAL A . n A 1 32 GLU 32 34 34 GLU GLU A . n A 1 33 ARG 33 35 35 ARG ARG A . n A 1 34 THR 34 36 36 THR THR A . n A 1 35 ASN 35 37 37 ASN ASN A . n A 1 36 ILE 36 38 38 ILE ILE A . n A 1 37 PRO 37 39 39 PRO PRO A . n A 1 38 ARG 38 40 40 ARG ARG A . n A 1 39 ILE 39 41 41 ILE ILE A . n A 1 40 CYS 40 42 42 CYS CYS A . n A 1 41 SER 41 43 43 SER SER A . n A 1 42 LYS 42 44 44 LYS LYS A . n A 1 43 GLY 43 45 45 GLY GLY A . n A 1 44 LYS 44 46 46 LYS LYS A . n A 1 45 ARG 45 47 47 ARG ARG A . n A 1 46 THR 46 48 48 THR THR A . n A 1 47 VAL 47 49 49 VAL VAL A . n A 1 48 ASP 48 50 50 ASP ASP A . n A 1 49 LEU 49 51 51 LEU LEU A . n A 1 50 GLY 50 52 52 GLY GLY A . n A 1 51 GLN 51 53 53 GLN GLN A . n A 1 52 CYS 52 54 54 CYS CYS A . n A 1 53 GLY 53 55 55 GLY GLY A . n A 1 54 LEU 54 56 56 LEU LEU A . n A 1 55 LEU 55 57 57 LEU LEU A . n A 1 56 GLY 56 58 58 GLY GLY A . n A 1 57 THR 57 59 59 THR THR A . n A 1 58 ILE 58 60 60 ILE ILE A . n A 1 59 THR 59 61 61 THR THR A . n A 1 60 GLY 60 62 62 GLY GLY A . n A 1 61 PRO 61 63 63 PRO PRO A . n A 1 62 PRO 62 64 64 PRO PRO A . n A 1 63 GLN 63 65 65 GLN GLN A . n A 1 64 CYS 64 66 66 CYS CYS A . n A 1 65 ASP 65 67 67 ASP ASP A . n A 1 66 GLN 66 68 68 GLN GLN A . n A 1 67 PHE 67 69 69 PHE PHE A . n A 1 68 LEU 68 70 70 LEU LEU A . n A 1 69 GLU 69 71 71 GLU GLU A . n A 1 70 PHE 70 72 72 PHE PHE A . n A 1 71 SER 71 73 73 SER SER A . n A 1 72 ALA 72 74 74 ALA ALA A . n A 1 73 ASP 73 75 75 ASP ASP A . n A 1 74 LEU 74 76 76 LEU LEU A . n A 1 75 ILE 75 77 77 ILE ILE A . n A 1 76 ILE 76 78 78 ILE ILE A . n A 1 77 GLU 77 79 79 GLU GLU A . n A 1 78 ARG 78 80 80 ARG ARG A . n A 1 79 ARG 79 81 81 ARG ARG A . n A 1 80 GLU 80 82 82 GLU GLU A . n A 1 81 GLY 81 83 83 GLY GLY A . n A 1 82 SER 82 84 84 SER SER A . n A 1 83 ASP 83 85 85 ASP ASP A . n A 1 84 VAL 84 86 86 VAL VAL A . n A 1 85 CYS 85 87 87 CYS CYS A . n A 1 86 TYR 86 88 88 TYR TYR A . n A 1 87 PRO 87 89 89 PRO PRO A . n A 1 88 GLY 88 90 90 GLY GLY A . n A 1 89 LYS 89 91 91 LYS LYS A . n A 1 90 PHE 90 92 92 PHE PHE A . n A 1 91 VAL 91 93 93 VAL VAL A . n A 1 92 ASN 92 94 94 ASN ASN A . n A 1 93 GLU 93 95 95 GLU GLU A . n A 1 94 GLU 94 96 96 GLU GLU A . n A 1 95 ALA 95 97 97 ALA ALA A . n A 1 96 LEU 96 98 98 LEU LEU A . n A 1 97 ARG 97 99 99 ARG ARG A . n A 1 98 GLN 98 100 100 GLN GLN A . n A 1 99 ILE 99 101 101 ILE ILE A . n A 1 100 LEU 100 102 102 LEU LEU A . n A 1 101 ARG 101 103 103 ARG ARG A . n A 1 102 GLU 102 104 104 GLU GLU A . n A 1 103 SER 103 105 105 SER SER A . n A 1 104 GLY 104 106 106 GLY GLY A . n A 1 105 GLY 105 107 107 GLY GLY A . n A 1 106 ILE 106 108 108 ILE ILE A . n A 1 107 ASP 107 109 109 ASP ASP A . n A 1 108 LYS 108 110 110 LYS LYS A . n A 1 109 GLU 109 111 111 GLU GLU A . n A 1 110 ALA 110 112 112 ALA ALA A . n A 1 111 MET 111 113 113 MET MET A . n A 1 112 GLY 112 114 114 GLY GLY A . n A 1 113 PHE 113 115 115 PHE PHE A . n A 1 114 THR 114 116 116 THR THR A . n A 1 115 TYR 115 117 117 TYR TYR A . n A 1 116 SER 116 118 118 SER SER A . n A 1 117 GLY 117 119 119 GLY GLY A . n A 1 118 ILE 118 120 120 ILE ILE A . n A 1 119 ARG 119 121 121 ARG ARG A . n A 1 120 THR 120 122 122 THR THR A . n A 1 121 ASN 121 123 123 ASN ASN A . n A 1 122 GLY 122 124 124 GLY GLY A . n A 1 123 ALA 123 125 125 ALA ALA A . n A 1 124 THR 124 126 126 THR THR A . n A 1 125 SER 125 127 127 SER SER A . n A 1 126 ALA 126 128 128 ALA ALA A . n A 1 127 CYS 127 129 129 CYS CYS A . n A 1 128 ARG 128 130 130 ARG ARG A . n A 1 129 ARG 129 131 131 ARG ARG A . n A 1 130 SER 130 132 132 SER SER A . n A 1 131 GLY 131 133 133 GLY GLY A . n A 1 132 SER 132 134 134 SER SER A . n A 1 133 SER 133 135 135 SER SER A . n A 1 134 PHE 134 136 136 PHE PHE A . n A 1 135 TYR 135 137 137 TYR TYR A . n A 1 136 ALA 136 138 138 ALA ALA A . n A 1 137 GLU 137 139 139 GLU GLU A . n A 1 138 MET 138 140 140 MET MET A . n A 1 139 LYS 139 141 141 LYS LYS A . n A 1 140 TRP 140 142 142 TRP TRP A . n A 1 141 LEU 141 143 143 LEU LEU A . n A 1 142 LEU 142 144 144 LEU LEU A . n A 1 143 SER 143 145 145 SER SER A . n A 1 144 ASN 144 146 146 ASN ASN A . n A 1 145 THR 145 147 147 THR THR A . n A 1 146 ASP 146 148 148 ASP ASP A . n A 1 147 ASN 147 149 149 ASN ASN A . n A 1 148 ALA 148 150 150 ALA ALA A . n A 1 149 ALA 149 151 151 ALA ALA A . n A 1 150 PHE 150 152 152 PHE PHE A . n A 1 151 PRO 151 153 153 PRO PRO A . n A 1 152 GLN 152 154 154 GLN GLN A . n A 1 153 MET 153 155 155 MET MET A . n A 1 154 THR 154 156 156 THR THR A . n A 1 155 LYS 155 157 157 LYS LYS A . n A 1 156 SER 156 158 158 SER SER A . n A 1 157 TYR 157 159 159 TYR TYR A . n A 1 158 LYS 158 160 160 LYS LYS A . n A 1 159 ASN 159 161 161 ASN ASN A . n A 1 160 THR 160 162 162 THR THR A . n A 1 161 ARG 161 163 163 ARG ARG A . n A 1 162 LYS 162 164 164 LYS LYS A . n A 1 163 SER 163 165 165 SER SER A . n A 1 164 PRO 164 166 166 PRO PRO A . n A 1 165 ALA 165 167 167 ALA ALA A . n A 1 166 LEU 166 168 168 LEU LEU A . n A 1 167 ILE 167 169 169 ILE ILE A . n A 1 168 VAL 168 170 170 VAL VAL A . n A 1 169 TRP 169 171 171 TRP TRP A . n A 1 170 GLY 170 172 172 GLY GLY A . n A 1 171 ILE 171 173 173 ILE ILE A . n A 1 172 HIS 172 174 174 HIS HIS A . n A 1 173 HIS 173 175 175 HIS HIS A . n A 1 174 SER 174 176 176 SER SER A . n A 1 175 VAL 175 177 177 VAL VAL A . n A 1 176 SER 176 178 178 SER SER A . n A 1 177 THR 177 179 179 THR THR A . n A 1 178 ALA 178 180 180 ALA ALA A . n A 1 179 GLU 179 181 181 GLU GLU A . n A 1 180 GLN 180 182 182 GLN GLN A . n A 1 181 THR 181 183 183 THR THR A . n A 1 182 LYS 182 184 184 LYS LYS A . n A 1 183 LEU 183 185 185 LEU LEU A . n A 1 184 TYR 184 186 186 TYR TYR A . n A 1 185 GLY 185 187 187 GLY GLY A . n A 1 186 SER 186 188 188 SER SER A . n A 1 187 GLY 187 189 189 GLY GLY A . n A 1 188 ASN 188 190 190 ASN ASN A . n A 1 189 LYS 189 191 191 LYS LYS A . n A 1 190 LEU 190 192 192 LEU LEU A . n A 1 191 VAL 191 193 193 VAL VAL A . n A 1 192 THR 192 194 194 THR THR A . n A 1 193 VAL 193 195 195 VAL VAL A . n A 1 194 GLY 194 196 196 GLY GLY A . n A 1 195 SER 195 197 197 SER SER A . n A 1 196 SER 196 198 198 SER SER A . n A 1 197 ASN 197 199 199 ASN ASN A . n A 1 198 TYR 198 200 200 TYR TYR A . n A 1 199 GLN 199 201 201 GLN GLN A . n A 1 200 GLN 200 202 202 GLN GLN A . n A 1 201 SER 201 203 203 SER SER A . n A 1 202 PHE 202 204 204 PHE PHE A . n A 1 203 VAL 203 205 205 VAL VAL A . n A 1 204 PRO 204 206 206 PRO PRO A . n A 1 205 SER 205 207 207 SER SER A . n A 1 206 PRO 206 208 208 PRO PRO A . n A 1 207 GLY 207 209 209 GLY GLY A . n A 1 208 ALA 208 210 210 ALA ALA A . n A 1 209 ARG 209 211 211 ARG ARG A . n A 1 210 PRO 210 212 212 PRO PRO A . n A 1 211 GLN 211 213 213 GLN GLN A . n A 1 212 VAL 212 214 214 VAL VAL A . n A 1 213 ASN 213 215 215 ASN ASN A . n A 1 214 GLY 214 216 216 GLY GLY A . n A 1 215 GLN 215 217 217 GLN GLN A . n A 1 216 SER 216 218 218 SER SER A . n A 1 217 GLY 217 219 219 GLY GLY A . n A 1 218 ARG 218 220 220 ARG ARG A . n A 1 219 ILE 219 221 221 ILE ILE A . n A 1 220 ASP 220 222 222 ASP ASP A . n A 1 221 PHE 221 223 223 PHE PHE A . n A 1 222 HIS 222 224 224 HIS HIS A . n A 1 223 TRP 223 225 225 TRP TRP A . n A 1 224 LEU 224 226 226 LEU LEU A . n A 1 225 MET 225 227 227 MET MET A . n A 1 226 LEU 226 228 228 LEU LEU A . n A 1 227 ASN 227 229 229 ASN ASN A . n A 1 228 PRO 228 230 230 PRO PRO A . n A 1 229 ASN 229 231 231 ASN ASN A . n A 1 230 ASP 230 232 232 ASP ASP A . n A 1 231 THR 231 233 233 THR THR A . n A 1 232 VAL 232 234 234 VAL VAL A . n A 1 233 THR 233 235 235 THR THR A . n A 1 234 PHE 234 236 236 PHE PHE A . n A 1 235 SER 235 237 237 SER SER A . n A 1 236 PHE 236 238 238 PHE PHE A . n A 1 237 ASN 237 239 239 ASN ASN A . n A 1 238 GLY 238 240 240 GLY GLY A . n A 1 239 ALA 239 241 241 ALA ALA A . n A 1 240 PHE 240 242 242 PHE PHE A . n A 1 241 ILE 241 243 243 ILE ILE A . n A 1 242 ALA 242 244 244 ALA ALA A . n A 1 243 PRO 243 245 245 PRO PRO A . n A 1 244 ASP 244 246 246 ASP ASP A . n A 1 245 ARG 245 247 247 ARG ARG A . n A 1 246 ALA 246 248 248 ALA ALA A . n A 1 247 SER 247 249 249 SER SER A . n A 1 248 PHE 248 250 250 PHE PHE A . n A 1 249 LEU 249 251 251 LEU LEU A . n A 1 250 ARG 250 252 252 ARG ARG A . n A 1 251 GLY 251 253 253 GLY GLY A . n A 1 252 LYS 252 254 254 LYS LYS A . n A 1 253 SER 253 255 255 SER SER A . n A 1 254 MET 254 256 256 MET MET A . n A 1 255 GLY 255 257 257 GLY GLY A . n A 1 256 ILE 256 258 258 ILE ILE A . n A 1 257 GLN 257 259 259 GLN GLN A . n A 1 258 SER 258 260 260 SER SER A . n A 1 259 GLY 259 261 261 GLY GLY A . n A 1 260 VAL 260 262 262 VAL VAL A . n A 1 261 GLN 261 263 263 GLN GLN A . n A 1 262 VAL 262 264 264 VAL VAL A . n A 1 263 ASP 263 265 265 ASP ASP A . n A 1 264 ALA 264 266 266 ALA ALA A . n A 1 265 ASN 265 267 267 ASN ASN A . n A 1 266 CYS 266 268 268 CYS CYS A . n A 1 267 GLU 267 269 269 GLU GLU A . n A 1 268 GLY 268 270 270 GLY GLY A . n A 1 269 ASP 269 271 271 ASP ASP A . n A 1 270 CYS 270 272 272 CYS CYS A . n A 1 271 TYR 271 273 273 TYR TYR A . n A 1 272 HIS 272 274 274 HIS HIS A . n A 1 273 SER 273 275 275 SER SER A . n A 1 274 GLY 274 276 276 GLY GLY A . n A 1 275 GLY 275 277 277 GLY GLY A . n A 1 276 THR 276 278 278 THR THR A . n A 1 277 ILE 277 279 279 ILE ILE A . n A 1 278 ILE 278 280 280 ILE ILE A . n A 1 279 SER 279 281 281 SER SER A . n A 1 280 ASN 280 282 282 ASN ASN A . n A 1 281 LEU 281 283 283 LEU LEU A . n A 1 282 PRO 282 284 284 PRO PRO A . n A 1 283 PHE 283 285 285 PHE PHE A . n A 1 284 GLN 284 286 286 GLN GLN A . n A 1 285 ASN 285 287 287 ASN ASN A . n A 1 286 ILE 286 288 288 ILE ILE A . n A 1 287 ASP 287 289 289 ASP ASP A . n A 1 288 SER 288 290 290 SER SER A . n A 1 289 ARG 289 291 291 ARG ARG A . n A 1 290 ALA 290 292 292 ALA ALA A . n A 1 291 VAL 291 293 293 VAL VAL A . n A 1 292 GLY 292 294 294 GLY GLY A . n A 1 293 LYS 293 295 295 LYS LYS A . n A 1 294 CYS 294 296 296 CYS CYS A . n A 1 295 PRO 295 297 297 PRO PRO A . n A 1 296 ARG 296 298 298 ARG ARG A . n A 1 297 TYR 297 299 299 TYR TYR A . n A 1 298 VAL 298 300 300 VAL VAL A . n A 1 299 LYS 299 301 301 LYS LYS A . n A 1 300 GLN 300 302 302 GLN GLN A . n A 1 301 ARG 301 303 303 ARG ARG A . n A 1 302 SER 302 304 304 SER SER A . n A 1 303 LEU 303 305 305 LEU LEU A . n A 1 304 LEU 304 306 306 LEU LEU A . n A 1 305 LEU 305 307 307 LEU LEU A . n A 1 306 ALA 306 308 308 ALA ALA A . n A 1 307 THR 307 309 309 THR THR A . n A 1 308 GLY 308 310 310 GLY GLY A . n A 1 309 MET 309 311 311 MET MET A . n A 1 310 LYS 310 312 312 LYS LYS A . n A 1 311 ASN 311 313 313 ASN ASN A . n A 1 312 VAL 312 314 314 VAL VAL A . n A 1 313 PRO 313 315 315 PRO PRO A . n A 1 314 GLU 314 316 316 GLU GLU A . n B 2 1 LEU 1 323 323 LEU LEU B . n B 2 2 PHE 2 324 324 PHE PHE B . n B 2 3 GLY 3 325 325 GLY GLY B . n B 2 4 ALA 4 326 326 ALA ALA B . n B 2 5 ILE 5 327 327 ILE ILE B . n B 2 6 ALA 6 328 328 ALA ALA B . n B 2 7 GLY 7 329 329 GLY GLY B . n B 2 8 PHE 8 330 330 PHE PHE B . n B 2 9 ILE 9 331 331 ILE ILE B . n B 2 10 GLU 10 332 332 GLU GLU B . n B 2 11 ASN 11 333 333 ASN ASN B . n B 2 12 GLY 12 334 334 GLY GLY B . n B 2 13 TRP 13 335 335 TRP TRP B . n B 2 14 GLU 14 336 336 GLU GLU B . n B 2 15 GLY 15 337 337 GLY GLY B . n B 2 16 LEU 16 338 338 LEU LEU B . n B 2 17 ILE 17 339 339 ILE ILE B . n B 2 18 ASP 18 340 340 ASP ASP B . n B 2 19 GLY 19 341 341 GLY GLY B . n B 2 20 TRP 20 342 342 TRP TRP B . n B 2 21 TYR 21 343 343 TYR TYR B . n B 2 22 GLY 22 344 344 GLY GLY B . n B 2 23 PHE 23 345 345 PHE PHE B . n B 2 24 ARG 24 346 346 ARG ARG B . n B 2 25 HIS 25 347 347 HIS HIS B . n B 2 26 GLN 26 348 348 GLN GLN B . n B 2 27 ASN 27 349 349 ASN ASN B . n B 2 28 ALA 28 350 350 ALA ALA B . n B 2 29 GLN 29 351 351 GLN GLN B . n B 2 30 GLY 30 352 352 GLY GLY B . n B 2 31 GLU 31 353 353 GLU GLU B . n B 2 32 GLY 32 354 354 GLY GLY B . n B 2 33 THR 33 355 355 THR THR B . n B 2 34 ALA 34 356 356 ALA ALA B . n B 2 35 ALA 35 357 357 ALA ALA B . n B 2 36 ASP 36 358 358 ASP ASP B . n B 2 37 TYR 37 359 359 TYR TYR B . n B 2 38 LYS 38 360 360 LYS LYS B . n B 2 39 SER 39 361 361 SER SER B . n B 2 40 THR 40 362 362 THR THR B . n B 2 41 GLN 41 363 363 GLN GLN B . n B 2 42 SER 42 364 364 SER SER B . n B 2 43 ALA 43 365 365 ALA ALA B . n B 2 44 ILE 44 366 366 ILE ILE B . n B 2 45 ASP 45 367 367 ASP ASP B . n B 2 46 GLN 46 368 368 GLN GLN B . n B 2 47 ILE 47 369 369 ILE ILE B . n B 2 48 THR 48 370 370 THR THR B . n B 2 49 GLY 49 371 371 GLY GLY B . n B 2 50 LYS 50 372 372 LYS LYS B . n B 2 51 LEU 51 373 373 LEU LEU B . n B 2 52 ASN 52 374 374 ASN ASN B . n B 2 53 ARG 53 375 375 ARG ARG B . n B 2 54 LEU 54 376 376 LEU LEU B . n B 2 55 ILE 55 377 377 ILE ILE B . n B 2 56 GLU 56 378 378 GLU GLU B . n B 2 57 LYS 57 379 379 LYS LYS B . n B 2 58 THR 58 380 380 THR THR B . n B 2 59 ASN 59 381 381 ASN ASN B . n B 2 60 GLN 60 382 382 GLN GLN B . n B 2 61 GLN 61 383 383 GLN GLN B . n B 2 62 PHE 62 384 384 PHE PHE B . n B 2 63 GLU 63 385 385 GLU GLU B . n B 2 64 LEU 64 386 386 LEU LEU B . n B 2 65 ILE 65 387 387 ILE ILE B . n B 2 66 ASP 66 388 388 ASP ASP B . n B 2 67 ASN 67 389 389 ASN ASN B . n B 2 68 GLU 68 390 390 GLU GLU B . n B 2 69 PHE 69 391 391 PHE PHE B . n B 2 70 ASN 70 392 392 ASN ASN B . n B 2 71 GLU 71 393 393 GLU GLU B . n B 2 72 VAL 72 394 394 VAL VAL B . n B 2 73 GLU 73 395 395 GLU GLU B . n B 2 74 LYS 74 396 396 LYS LYS B . n B 2 75 GLN 75 397 397 GLN GLN B . n B 2 76 ILE 76 398 398 ILE ILE B . n B 2 77 GLY 77 399 399 GLY GLY B . n B 2 78 ASN 78 400 400 ASN ASN B . n B 2 79 VAL 79 401 401 VAL VAL B . n B 2 80 ILE 80 402 402 ILE ILE B . n B 2 81 ASN 81 403 403 ASN ASN B . n B 2 82 TRP 82 404 404 TRP TRP B . n B 2 83 THR 83 405 405 THR THR B . n B 2 84 ARG 84 406 406 ARG ARG B . n B 2 85 ASP 85 407 407 ASP ASP B . n B 2 86 SER 86 408 408 SER SER B . n B 2 87 ILE 87 409 409 ILE ILE B . n B 2 88 THR 88 410 410 THR THR B . n B 2 89 GLU 89 411 411 GLU GLU B . n B 2 90 VAL 90 412 412 VAL VAL B . n B 2 91 TRP 91 413 413 TRP TRP B . n B 2 92 SER 92 414 414 SER SER B . n B 2 93 TYR 93 415 415 TYR TYR B . n B 2 94 ASN 94 416 416 ASN ASN B . n B 2 95 ALA 95 417 417 ALA ALA B . n B 2 96 GLU 96 418 418 GLU GLU B . n B 2 97 LEU 97 419 419 LEU LEU B . n B 2 98 LEU 98 420 420 LEU LEU B . n B 2 99 VAL 99 421 421 VAL VAL B . n B 2 100 ALA 100 422 422 ALA ALA B . n B 2 101 MET 101 423 423 MET MET B . n B 2 102 GLU 102 424 424 GLU GLU B . n B 2 103 ASN 103 425 425 ASN ASN B . n B 2 104 GLN 104 426 426 GLN GLN B . n B 2 105 HIS 105 427 427 HIS HIS B . n B 2 106 THR 106 428 428 THR THR B . n B 2 107 ILE 107 429 429 ILE ILE B . n B 2 108 ASP 108 430 430 ASP ASP B . n B 2 109 LEU 109 431 431 LEU LEU B . n B 2 110 ALA 110 432 432 ALA ALA B . n B 2 111 ASP 111 433 433 ASP ASP B . n B 2 112 SER 112 434 434 SER SER B . n B 2 113 GLU 113 435 435 GLU GLU B . n B 2 114 MET 114 436 436 MET MET B . n B 2 115 ASP 115 437 437 ASP ASP B . n B 2 116 LYS 116 438 438 LYS LYS B . n B 2 117 LEU 117 439 439 LEU LEU B . n B 2 118 TYR 118 440 440 TYR TYR B . n B 2 119 GLU 119 441 441 GLU GLU B . n B 2 120 ARG 120 442 442 ARG ARG B . n B 2 121 VAL 121 443 443 VAL VAL B . n B 2 122 LYS 122 444 444 LYS LYS B . n B 2 123 ARG 123 445 445 ARG ARG B . n B 2 124 GLN 124 446 446 GLN GLN B . n B 2 125 LEU 125 447 447 LEU LEU B . n B 2 126 ARG 126 448 448 ARG ARG B . n B 2 127 GLU 127 449 449 GLU GLU B . n B 2 128 ASN 128 450 450 ASN ASN B . n B 2 129 ALA 129 451 451 ALA ALA B . n B 2 130 GLU 130 452 452 GLU GLU B . n B 2 131 GLU 131 453 453 GLU GLU B . n B 2 132 ASP 132 454 454 ASP ASP B . n B 2 133 GLY 133 455 455 GLY GLY B . n B 2 134 THR 134 456 456 THR THR B . n B 2 135 GLY 135 457 457 GLY GLY B . n B 2 136 CYS 136 458 458 CYS CYS B . n B 2 137 PHE 137 459 459 PHE PHE B . n B 2 138 GLU 138 460 460 GLU GLU B . n B 2 139 ILE 139 461 461 ILE ILE B . n B 2 140 PHE 140 462 462 PHE PHE B . n B 2 141 HIS 141 463 463 HIS HIS B . n B 2 142 LYS 142 464 464 LYS LYS B . n B 2 143 CYS 143 465 465 CYS CYS B . n B 2 144 ASP 144 466 466 ASP ASP B . n B 2 145 ASP 145 467 467 ASP ASP B . n B 2 146 ASP 146 468 468 ASP ASP B . n B 2 147 CYS 147 469 469 CYS CYS B . n B 2 148 MET 148 470 470 MET MET B . n B 2 149 ALA 149 471 471 ALA ALA B . n B 2 150 SER 150 472 472 SER SER B . n B 2 151 ILE 151 473 473 ILE ILE B . n B 2 152 ARG 152 474 474 ARG ARG B . n B 2 153 ASN 153 475 475 ASN ASN B . n B 2 154 ASN 154 476 476 ASN ASN B . n B 2 155 THR 155 477 477 THR THR B . n B 2 156 TYR 156 478 478 TYR TYR B . n B 2 157 ASP 157 479 479 ASP ASP B . n B 2 158 HIS 158 480 480 HIS HIS B . n B 2 159 SER 159 481 481 SER SER B . n B 2 160 LYS 160 482 482 LYS LYS B . n B 2 161 TYR 161 483 483 TYR TYR B . n B 2 162 ARG 162 484 484 ARG ARG B . n B 2 163 GLU 163 485 485 GLU GLU B . n B 2 164 GLU 164 486 486 GLU GLU B . n B 2 165 ALA 165 487 487 ALA ALA B . n B 2 166 MET 166 488 488 MET MET B . n B 2 167 GLN 167 489 489 GLN GLN B . n B 2 168 ASN 168 490 490 ASN ASN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 601 601 NAG NAG A . E 4 NAG 1 602 602 NAG NAG A . F 4 NAG 1 501 603 NAG NAG B . G 5 HOH 1 701 3 HOH HOH A . G 5 HOH 2 702 5 HOH HOH A . G 5 HOH 3 703 7 HOH HOH A . G 5 HOH 4 704 8 HOH HOH A . G 5 HOH 5 705 11 HOH HOH A . G 5 HOH 6 706 12 HOH HOH A . G 5 HOH 7 707 13 HOH HOH A . G 5 HOH 8 708 14 HOH HOH A . G 5 HOH 9 709 16 HOH HOH A . G 5 HOH 10 710 17 HOH HOH A . G 5 HOH 11 711 18 HOH HOH A . G 5 HOH 12 712 19 HOH HOH A . G 5 HOH 13 713 20 HOH HOH A . G 5 HOH 14 714 21 HOH HOH A . G 5 HOH 15 715 23 HOH HOH A . G 5 HOH 16 716 24 HOH HOH A . G 5 HOH 17 717 25 HOH HOH A . G 5 HOH 18 718 26 HOH HOH A . G 5 HOH 19 719 27 HOH HOH A . G 5 HOH 20 720 28 HOH HOH A . G 5 HOH 21 721 30 HOH HOH A . H 5 HOH 1 601 1 HOH HOH B . H 5 HOH 2 602 2 HOH HOH B . H 5 HOH 3 603 4 HOH HOH B . H 5 HOH 4 604 6 HOH HOH B . H 5 HOH 5 605 9 HOH HOH B . H 5 HOH 6 606 10 HOH HOH B . H 5 HOH 7 607 15 HOH HOH B . H 5 HOH 8 608 22 HOH HOH B . H 5 HOH 9 609 29 HOH HOH B . H 5 HOH 10 610 31 HOH HOH B . H 5 HOH 11 611 32 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900067 _pdbx_molecule_features.name "3'-sialyl-N-acetyllactosamine" _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900067 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 81 B ASN 403 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 229 A ASN 231 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 26 A ASN 28 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 36630 ? 1 MORE -112 ? 1 'SSA (A^2)' 57870 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -58.4545000000 0.8660254038 -0.5000000000 0.0000000000 101.2461639310 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -116.9090000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 603 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' entity_name_com 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_molecule_features 13 2 'Structure model' pdbx_nonpoly_scheme 14 2 'Structure model' pdbx_struct_assembly_gen 15 2 'Structure model' pdbx_struct_special_symmetry 16 2 'Structure model' struct_asym 17 2 'Structure model' struct_conn 18 2 'Structure model' struct_site 19 2 'Structure model' struct_site_gen 20 3 'Structure model' chem_comp 21 3 'Structure model' chem_comp_atom 22 3 'Structure model' chem_comp_bond 23 3 'Structure model' database_2 24 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_chem_comp.name' 15 2 'Structure model' '_chem_comp.type' 16 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 2 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 18 2 'Structure model' '_struct_conn.pdbx_dist_value' 19 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 2 'Structure model' '_struct_conn.pdbx_role' 21 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 3 'Structure model' '_chem_comp.pdbx_synonyms' 35 3 'Structure model' '_database_2.pdbx_DOI' 36 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -52.1357 13.7409 -0.9750 0.5018 0.4368 0.5939 0.0218 -0.0295 -0.0066 0.7288 0.8548 1.8928 0.2859 0.1565 0.2948 -0.0766 0.0124 -0.0445 -0.0251 0.0644 -0.1012 0.0281 0.1320 -0.0000 'X-RAY DIFFRACTION' 2 ? refined -59.9654 11.8511 -31.3283 0.8300 0.7154 0.7197 -0.0452 -0.0541 0.0392 1.5342 2.0225 0.7385 1.6319 0.1972 -0.2279 -0.4598 0.4568 0.0640 -0.9768 0.5225 0.4391 0.5720 0.2218 0.0000 'X-RAY DIFFRACTION' 3 ? refined -59.6235 23.4512 -35.4241 0.9362 0.6259 0.8508 -0.1654 -0.1794 0.2105 0.2932 0.2931 0.6860 -0.0164 0.3593 -0.3035 0.0987 0.2452 -0.1000 -0.6672 0.0380 0.4318 -0.4621 -0.0047 0.0000 'X-RAY DIFFRACTION' 4 ? refined -59.4532 17.0728 -24.0078 0.6387 0.5446 0.7722 -0.0326 -0.0945 0.0908 1.8945 2.1422 0.6807 1.5014 0.5904 0.9267 -0.2940 0.3955 0.3202 -0.5865 0.2112 0.5615 0.0106 0.1509 0.0000 'X-RAY DIFFRACTION' 5 ? refined -49.8792 14.3731 8.1553 0.4990 0.4312 0.5894 -0.0300 0.0270 -0.0558 0.4478 0.6925 0.5878 -0.0646 -0.2118 0.6310 0.0971 0.0716 -0.1815 0.1890 -0.2341 -0.1906 -0.0006 -0.1744 -0.0000 'X-RAY DIFFRACTION' 6 ? refined -43.6013 24.4063 30.3713 0.5330 0.7071 0.3954 0.1074 -0.0623 -0.0813 0.3140 0.3488 0.2428 -0.3042 -0.0174 0.1890 -0.2964 -0.5703 0.1492 0.0655 0.2098 0.0874 0.0292 -0.3896 -0.0006 'X-RAY DIFFRACTION' 7 ? refined -45.7504 20.2108 52.1725 1.5935 1.5375 0.8082 -0.1332 -0.3477 0.2266 0.8629 0.1710 0.4470 0.3325 -0.1746 -0.2214 0.1496 -0.8661 -0.3104 0.6714 -0.3386 -0.5403 0.0250 0.9279 0.0045 'X-RAY DIFFRACTION' 8 ? refined -55.1761 15.9863 40.8064 1.1285 0.8744 0.7087 -0.0619 -0.0757 0.1951 0.8615 0.2317 0.4409 0.3410 -0.6126 -0.1986 -0.3352 -0.3336 -0.2018 0.0284 -0.2089 -0.1060 1.2099 -0.5081 -0.0390 'X-RAY DIFFRACTION' 9 ? refined -54.6536 20.7270 1.0567 0.6487 0.5350 0.5823 0.0155 0.0706 0.0325 0.5226 1.5331 0.3227 -0.7760 -0.3735 0.3397 -0.1642 0.4875 -0.2618 -0.1327 0.0448 -0.1201 -0.0730 -0.5420 -0.0042 'X-RAY DIFFRACTION' 10 ? refined -53.6201 29.3882 26.4972 0.4641 0.3981 0.4617 -0.0131 -0.0678 -0.0362 0.7707 0.4459 0.8200 -0.4598 0.7672 -0.4214 -0.0566 -0.1661 0.0926 0.0374 0.0882 -0.1538 0.1810 0.0510 0.0000 'X-RAY DIFFRACTION' 11 ? refined -52.4644 20.7428 65.2972 1.8597 1.9738 0.5810 0.1581 -0.1295 0.2381 0.7974 0.7112 0.0493 0.4928 0.0966 -0.0739 -0.2525 -1.4956 -0.1234 1.7202 0.1994 -0.1662 -0.7999 1.0683 0.0165 'X-RAY DIFFRACTION' 12 ? refined -59.7192 19.7562 70.7914 1.7149 1.8569 1.0264 0.2989 -0.0201 0.2230 0.0511 0.1705 0.0541 0.1036 0.0520 0.1089 -1.3905 0.0075 0.7658 0.3620 0.7920 1.3889 0.6326 0.2236 -0.0062 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 3:122)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 123:175)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 176:204)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 205:259)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 260:299)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 300:316)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 323:352)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 353:376)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 377:395)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 396:446)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 447:474)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 475:490)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4LKJ _pdbx_entry_details.sequence_details 'THE SEQUENCE DATABASE REFERENCES FOR THIS PROTEIN WHICH DERIVED FROM STRAIN A/ANHUI/1/2013 DOES NOT CURRENTLY EXIST.' _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 28 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 601 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.89 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 39 ? ? -79.97 41.53 2 1 GLU A 71 ? ? -142.63 41.33 3 1 CYS A 87 ? ? -105.12 -67.18 4 1 THR A 122 ? ? -144.39 -15.21 5 1 ARG A 131 ? ? -136.65 -99.78 6 1 SER A 135 ? ? -132.58 -157.43 7 1 ASN A 149 ? ? -161.88 -137.41 8 1 ALA A 150 ? ? 75.27 177.48 9 1 GLN A 154 ? ? -65.64 91.65 10 1 SER A 198 ? ? -92.43 40.58 11 1 ASN A 199 ? ? -173.76 -34.72 12 1 GLN A 201 ? ? -166.54 103.78 13 1 SER A 207 ? ? -153.42 73.30 14 1 ASN A 231 ? ? 70.47 -6.99 15 1 ASN A 239 ? ? -144.01 10.66 16 1 ASP A 271 ? ? -150.59 -19.23 17 1 ALA B 326 ? ? -147.21 -76.85 18 1 GLN B 348 ? ? -157.54 86.58 19 1 ASN B 349 ? ? -102.93 -142.57 20 1 GLN B 351 ? ? -74.58 25.42 21 1 ALA B 356 ? ? -122.76 -156.58 22 1 ARG B 448 ? ? 51.12 -133.08 23 1 SER B 481 ? ? -153.28 -42.31 24 1 LYS B 482 ? ? -75.84 45.83 25 1 TYR B 483 ? ? -173.96 10.93 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GAL C1 C N R 88 GAL C2 C N R 89 GAL C3 C N S 90 GAL C4 C N R 91 GAL C5 C N R 92 GAL C6 C N N 93 GAL O1 O N N 94 GAL O2 O N N 95 GAL O3 O N N 96 GAL O4 O N N 97 GAL O5 O N N 98 GAL O6 O N N 99 GAL H1 H N N 100 GAL H2 H N N 101 GAL H3 H N N 102 GAL H4 H N N 103 GAL H5 H N N 104 GAL H61 H N N 105 GAL H62 H N N 106 GAL HO1 H N N 107 GAL HO2 H N N 108 GAL HO3 H N N 109 GAL HO4 H N N 110 GAL HO6 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 NAG C1 C N R 274 NAG C2 C N R 275 NAG C3 C N R 276 NAG C4 C N S 277 NAG C5 C N R 278 NAG C6 C N N 279 NAG C7 C N N 280 NAG C8 C N N 281 NAG N2 N N N 282 NAG O1 O N N 283 NAG O3 O N N 284 NAG O4 O N N 285 NAG O5 O N N 286 NAG O6 O N N 287 NAG O7 O N N 288 NAG H1 H N N 289 NAG H2 H N N 290 NAG H3 H N N 291 NAG H4 H N N 292 NAG H5 H N N 293 NAG H61 H N N 294 NAG H62 H N N 295 NAG H81 H N N 296 NAG H82 H N N 297 NAG H83 H N N 298 NAG HN2 H N N 299 NAG HO1 H N N 300 NAG HO3 H N N 301 NAG HO4 H N N 302 NAG HO6 H N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 SIA C1 C N N 358 SIA C2 C N R 359 SIA C3 C N N 360 SIA C4 C N S 361 SIA C5 C N R 362 SIA C6 C N R 363 SIA C7 C N R 364 SIA C8 C N R 365 SIA C9 C N N 366 SIA C10 C N N 367 SIA C11 C N N 368 SIA N5 N N N 369 SIA O1A O N N 370 SIA O1B O N N 371 SIA O2 O N N 372 SIA O4 O N N 373 SIA O6 O N N 374 SIA O7 O N N 375 SIA O8 O N N 376 SIA O9 O N N 377 SIA O10 O N N 378 SIA H32 H N N 379 SIA H31 H N N 380 SIA H4 H N N 381 SIA H5 H N N 382 SIA H6 H N N 383 SIA H7 H N N 384 SIA H8 H N N 385 SIA H92 H N N 386 SIA H91 H N N 387 SIA H111 H N N 388 SIA H113 H N N 389 SIA H112 H N N 390 SIA HN5 H N N 391 SIA HO1B H N N 392 SIA HO2 H N N 393 SIA HO4 H N N 394 SIA HO7 H N N 395 SIA HO8 H N N 396 SIA HO9 H N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GAL C1 C2 sing N N 83 GAL C1 O1 sing N N 84 GAL C1 O5 sing N N 85 GAL C1 H1 sing N N 86 GAL C2 C3 sing N N 87 GAL C2 O2 sing N N 88 GAL C2 H2 sing N N 89 GAL C3 C4 sing N N 90 GAL C3 O3 sing N N 91 GAL C3 H3 sing N N 92 GAL C4 C5 sing N N 93 GAL C4 O4 sing N N 94 GAL C4 H4 sing N N 95 GAL C5 C6 sing N N 96 GAL C5 O5 sing N N 97 GAL C5 H5 sing N N 98 GAL C6 O6 sing N N 99 GAL C6 H61 sing N N 100 GAL C6 H62 sing N N 101 GAL O1 HO1 sing N N 102 GAL O2 HO2 sing N N 103 GAL O3 HO3 sing N N 104 GAL O4 HO4 sing N N 105 GAL O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NAG C1 C2 sing N N 261 NAG C1 O1 sing N N 262 NAG C1 O5 sing N N 263 NAG C1 H1 sing N N 264 NAG C2 C3 sing N N 265 NAG C2 N2 sing N N 266 NAG C2 H2 sing N N 267 NAG C3 C4 sing N N 268 NAG C3 O3 sing N N 269 NAG C3 H3 sing N N 270 NAG C4 C5 sing N N 271 NAG C4 O4 sing N N 272 NAG C4 H4 sing N N 273 NAG C5 C6 sing N N 274 NAG C5 O5 sing N N 275 NAG C5 H5 sing N N 276 NAG C6 O6 sing N N 277 NAG C6 H61 sing N N 278 NAG C6 H62 sing N N 279 NAG C7 C8 sing N N 280 NAG C7 N2 sing N N 281 NAG C7 O7 doub N N 282 NAG C8 H81 sing N N 283 NAG C8 H82 sing N N 284 NAG C8 H83 sing N N 285 NAG N2 HN2 sing N N 286 NAG O1 HO1 sing N N 287 NAG O3 HO3 sing N N 288 NAG O4 HO4 sing N N 289 NAG O6 HO6 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 SIA C1 C2 sing N N 344 SIA C1 O1A doub N N 345 SIA C1 O1B sing N N 346 SIA C2 C3 sing N N 347 SIA C2 O2 sing N N 348 SIA C2 O6 sing N N 349 SIA C3 C4 sing N N 350 SIA C3 H32 sing N N 351 SIA C3 H31 sing N N 352 SIA C4 C5 sing N N 353 SIA C4 O4 sing N N 354 SIA C4 H4 sing N N 355 SIA C5 C6 sing N N 356 SIA C5 N5 sing N N 357 SIA C5 H5 sing N N 358 SIA C6 C7 sing N N 359 SIA C6 O6 sing N N 360 SIA C6 H6 sing N N 361 SIA C7 C8 sing N N 362 SIA C7 O7 sing N N 363 SIA C7 H7 sing N N 364 SIA C8 C9 sing N N 365 SIA C8 O8 sing N N 366 SIA C8 H8 sing N N 367 SIA C9 O9 sing N N 368 SIA C9 H92 sing N N 369 SIA C9 H91 sing N N 370 SIA C10 C11 sing N N 371 SIA C10 N5 sing N N 372 SIA C10 O10 doub N N 373 SIA C11 H111 sing N N 374 SIA C11 H113 sing N N 375 SIA C11 H112 sing N N 376 SIA N5 HN5 sing N N 377 SIA O1B HO1B sing N N 378 SIA O2 HO2 sing N N 379 SIA O4 HO4 sing N N 380 SIA O7 HO7 sing N N 381 SIA O8 HO8 sing N N 382 SIA O9 HO9 sing N N 383 THR N CA sing N N 384 THR N H sing N N 385 THR N H2 sing N N 386 THR CA C sing N N 387 THR CA CB sing N N 388 THR CA HA sing N N 389 THR C O doub N N 390 THR C OXT sing N N 391 THR CB OG1 sing N N 392 THR CB CG2 sing N N 393 THR CB HB sing N N 394 THR OG1 HG1 sing N N 395 THR CG2 HG21 sing N N 396 THR CG2 HG22 sing N N 397 THR CG2 HG23 sing N N 398 THR OXT HXT sing N N 399 TRP N CA sing N N 400 TRP N H sing N N 401 TRP N H2 sing N N 402 TRP CA C sing N N 403 TRP CA CB sing N N 404 TRP CA HA sing N N 405 TRP C O doub N N 406 TRP C OXT sing N N 407 TRP CB CG sing N N 408 TRP CB HB2 sing N N 409 TRP CB HB3 sing N N 410 TRP CG CD1 doub Y N 411 TRP CG CD2 sing Y N 412 TRP CD1 NE1 sing Y N 413 TRP CD1 HD1 sing N N 414 TRP CD2 CE2 doub Y N 415 TRP CD2 CE3 sing Y N 416 TRP NE1 CE2 sing Y N 417 TRP NE1 HE1 sing N N 418 TRP CE2 CZ2 sing Y N 419 TRP CE3 CZ3 doub Y N 420 TRP CE3 HE3 sing N N 421 TRP CZ2 CH2 doub Y N 422 TRP CZ2 HZ2 sing N N 423 TRP CZ3 CH2 sing Y N 424 TRP CZ3 HZ3 sing N N 425 TRP CH2 HH2 sing N N 426 TRP OXT HXT sing N N 427 TYR N CA sing N N 428 TYR N H sing N N 429 TYR N H2 sing N N 430 TYR CA C sing N N 431 TYR CA CB sing N N 432 TYR CA HA sing N N 433 TYR C O doub N N 434 TYR C OXT sing N N 435 TYR CB CG sing N N 436 TYR CB HB2 sing N N 437 TYR CB HB3 sing N N 438 TYR CG CD1 doub Y N 439 TYR CG CD2 sing Y N 440 TYR CD1 CE1 sing Y N 441 TYR CD1 HD1 sing N N 442 TYR CD2 CE2 doub Y N 443 TYR CD2 HD2 sing N N 444 TYR CE1 CZ doub Y N 445 TYR CE1 HE1 sing N N 446 TYR CE2 CZ sing Y N 447 TYR CE2 HE2 sing N N 448 TYR CZ OH sing N N 449 TYR OH HH sing N N 450 TYR OXT HXT sing N N 451 VAL N CA sing N N 452 VAL N H sing N N 453 VAL N H2 sing N N 454 VAL CA C sing N N 455 VAL CA CB sing N N 456 VAL CA HA sing N N 457 VAL C O doub N N 458 VAL C OXT sing N N 459 VAL CB CG1 sing N N 460 VAL CB CG2 sing N N 461 VAL CB HB sing N N 462 VAL CG1 HG11 sing N N 463 VAL CG1 HG12 sing N N 464 VAL CG1 HG13 sing N N 465 VAL CG2 HG21 sing N N 466 VAL CG2 HG22 sing N N 467 VAL CG2 HG23 sing N N 468 VAL OXT HXT sing N N 469 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 A NAG 803 n C 3 GAL 2 C GAL 2 A GAL 802 n C 3 SIA 3 C SIA 3 A SIA 801 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,3,2/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b3-c2' WURCS PDB2Glycan 1.1.0 3 3 '[][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 GAL C1 O1 1 NAG O4 HO4 sing ? 2 3 3 SIA C2 O2 2 GAL O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 GAL 2 n 3 SIA 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4DJ6 _pdbx_initial_refinement_model.details ? #