HEADER OXIDOREDUCTASE 10-JUL-13 4LMP TITLE MYCOBACTERIUM TUBERCULOSIS L-ALANINE DEHYDROGENASE X-RAY STRUCTURE IN TITLE 2 COMPLEX WITH N6-METHYL ADENOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANINE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.4.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: ALD, RVBD_2780; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, SUSCEPTIBILITY TO KNOWN MTB KEYWDS 2 INHIBITORS, MTBI, ROSSMANN FOLD, OXIDOREDUCTASE, N6-METHYL ADENOSINE KEYWDS 3 BINDING, STRUCTURES OF MTB PROTEINS CONFERRING SUSCEPTIBILITY TO KEYWDS 4 KNOWN MTB INHIBITORS EXPDTA X-RAY DIFFRACTION AUTHOR H.-B.KIM,L.-W.HUNG,C.W.GOULDING,T.C.TERWILLIGER,C.-Y.KIM,STRUCTURES AUTHOR 2 OF MTB PROTEINS CONFERRING SUSCEPTIBILITY TO KNOWN MTB INHIBITORS AUTHOR 3 (MTBI) REVDAT 2 20-SEP-23 4LMP 1 REMARK REVDAT 1 06-NOV-13 4LMP 0 JRNL AUTH H.-B.KIM,L.-W.HUNG,C.W.GOULDING,T.C.TERWILLIGER,C.-Y.KIM JRNL TITL DRUG TARGET ANALYSIS BY DYE-LIGAND AFFINITY CHROMATOGRAPHY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1933 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4151 - 4.6983 1.00 2396 153 0.1803 0.2271 REMARK 3 2 4.6983 - 3.7296 1.00 2274 145 0.1504 0.1814 REMARK 3 3 3.7296 - 3.2583 1.00 2274 146 0.1700 0.2130 REMARK 3 4 3.2583 - 2.9604 1.00 2222 141 0.1977 0.2448 REMARK 3 5 2.9604 - 2.7483 0.99 2215 143 0.1902 0.2516 REMARK 3 6 2.7483 - 2.5862 0.98 2189 138 0.1956 0.2089 REMARK 3 7 2.5862 - 2.4567 0.97 2188 139 0.1883 0.2348 REMARK 3 8 2.4567 - 2.3498 0.97 2151 137 0.1837 0.2346 REMARK 3 9 2.3498 - 2.2593 0.97 2127 137 0.1868 0.2511 REMARK 3 10 2.2593 - 2.1814 0.96 2120 134 0.1886 0.2313 REMARK 3 11 2.1814 - 2.1132 0.95 2108 132 0.2005 0.2602 REMARK 3 12 2.1132 - 2.0528 0.94 2077 134 0.2051 0.2575 REMARK 3 13 2.0528 - 1.9987 0.92 1991 130 0.2169 0.2897 REMARK 3 14 1.9987 - 1.9500 0.88 1948 124 0.2437 0.2859 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2837 REMARK 3 ANGLE : 1.136 3867 REMARK 3 CHIRALITY : 0.075 454 REMARK 3 PLANARITY : 0.005 499 REMARK 3 DIHEDRAL : 13.492 1002 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080822. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : SI111 REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33325 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.47800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.234 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: PDB ENTRY 2VHY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 5% 2-PROPANOL, PH REMARK 280 5.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 44.86500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.90282 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 96.80033 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 44.86500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.90282 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 96.80033 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 44.86500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.90282 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 96.80033 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 44.86500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.90282 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 96.80033 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 44.86500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.90282 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 96.80033 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 44.86500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.90282 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 96.80033 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.80564 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 193.60067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 51.80564 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 193.60067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 51.80564 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 193.60067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 51.80564 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 193.60067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 51.80564 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 193.60067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 51.80564 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 193.60067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 89.73000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 51.80564 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 193.60067 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 69480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -364.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 89.73000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 44.86500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 77.70846 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 44.86500 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -25.90282 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 193.60067 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 51.80564 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 193.60067 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 89.73000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 51.80564 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 193.60067 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 242 CB CG CD REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6MD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 408 DBREF 4LMP A 1 371 UNP I6YEC9 I6YEC9_MYCTU 1 371 SEQRES 1 A 371 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 A 371 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 A 371 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 A 371 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 A 371 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 A 371 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 A 371 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 A 371 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 A 371 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 A 371 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 A 371 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 A 371 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 A 371 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 A 371 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 A 371 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 A 371 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 A 371 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 A 371 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 A 371 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 A 371 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 A 371 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 A 371 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 A 371 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 A 371 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 A 371 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 A 371 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 A 371 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 A 371 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 A 371 GLU PRO ALA SER VAL LEU ALA HET 6MD A 401 20 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HETNAM 6MD N-METHYLADENOSINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 6MD C11 H15 N5 O4 FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 SO4 3(O4 S 2-) FORMUL 10 HOH *211(H2 O) HELIX 1 1 THR A 19 ARG A 29 1 11 HELIX 2 2 GLY A 40 ALA A 44 5 5 HELIX 3 3 THR A 46 ALA A 53 1 8 HELIX 4 4 THR A 60 ALA A 68 1 9 HELIX 5 5 ILE A 78 LEU A 85 5 8 HELIX 6 6 HIS A 96 ALA A 99 5 4 HELIX 7 7 SER A 100 GLY A 111 1 12 HELIX 8 8 GLU A 118 VAL A 120 5 3 HELIX 9 9 LEU A 130 LEU A 149 1 20 HELIX 10 10 MET A 150 GLY A 154 5 5 HELIX 11 11 GLY A 177 MET A 190 1 14 HELIX 12 12 ASN A 200 PHE A 211 1 12 HELIX 13 13 SER A 221 ALA A 232 1 12 HELIX 14 14 SER A 251 HIS A 257 1 7 HELIX 15 15 ALA A 268 GLY A 272 5 5 HELIX 16 16 ASN A 300 SER A 304 5 5 HELIX 17 17 VAL A 305 ASN A 336 1 32 HELIX 18 18 ASN A 336 LYS A 341 1 6 HELIX 19 19 SER A 352 GLY A 360 1 9 HELIX 20 20 PRO A 366 ALA A 371 1 6 SHEET 1 A 8 GLN A 56 VAL A 58 0 SHEET 2 A 8 GLU A 32 GLN A 36 1 N VAL A 33 O GLN A 56 SHEET 3 A 8 ARG A 2 ILE A 5 1 N VAL A 3 O LEU A 34 SHEET 4 A 8 LEU A 70 LEU A 72 1 O LEU A 70 N GLY A 4 SHEET 5 A 8 ILE A 90 THR A 93 1 O ILE A 90 N LEU A 71 SHEET 6 A 8 THR A 113 ALA A 116 1 O THR A 113 N LEU A 91 SHEET 7 A 8 LEU A 343 HIS A 346 -1 O SER A 344 N SER A 114 SHEET 8 A 8 ALA A 349 LEU A 350 -1 O ALA A 349 N HIS A 346 SHEET 1 B 7 HIS A 216 TYR A 219 0 SHEET 2 B 7 THR A 193 ASP A 198 1 N VAL A 196 O HIS A 216 SHEET 3 B 7 ASP A 170 ILE A 174 1 N VAL A 173 O THR A 195 SHEET 4 B 7 LEU A 234 GLY A 237 1 O ILE A 236 N VAL A 172 SHEET 5 B 7 VAL A 263 ASP A 266 1 O VAL A 265 N VAL A 235 SHEET 6 B 7 THR A 293 TYR A 296 1 O TYR A 296 N LEU A 264 SHEET 7 B 7 THR A 287 VAL A 290 -1 N PHE A 288 O PHE A 295 SITE 1 AC1 8 LEU A 197 ASP A 198 LYS A 203 SER A 220 SITE 2 AC1 8 VAL A 239 LEU A 240 LEU A 249 HOH A 665 SITE 1 AC2 4 GLY A 177 THR A 178 ALA A 179 GOL A 405 SITE 1 AC3 6 LEU A 130 SER A 134 LEU A 240 ILE A 267 SITE 2 AC3 6 PRO A 302 SO4 A 408 SITE 1 AC4 10 ALA A 116 THR A 119 LYS A 341 GLY A 342 SITE 2 AC4 10 LEU A 343 SER A 344 SER A 352 ARG A 354 SITE 3 AC4 10 VAL A 355 HOH A 532 SITE 1 AC5 6 ALA A 126 LEU A 127 ALA A 131 SER A 134 SITE 2 AC5 6 THR A 178 GOL A 402 SITE 1 AC6 4 ARG A 156 LYS A 259 LYS A 307 HOH A 538 SITE 1 AC7 7 GLY A 59 THR A 60 ALA A 61 ASP A 62 SITE 2 AC7 7 GLN A 63 ARG A 84 HOH A 583 SITE 1 AC8 6 ARG A 15 LYS A 75 MET A 133 ASN A 300 SITE 2 AC8 6 PRO A 302 GOL A 403 CRYST1 89.730 89.730 290.401 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011145 0.006434 0.000000 0.00000 SCALE2 0.000000 0.012869 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003444 0.00000