data_4LOT # _entry.id 4LOT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4LOT RCSB RCSB080898 WWPDB D_1000080898 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4LMF . unspecified PDB 4LOR . unspecified PDB 4LOS . unspecified # _pdbx_database_status.entry_id 4LOT _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-07-13 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wallis, R.' 1 'Venkatraman Girija, U.' 2 'Moody, P.C.E.' 3 'Marshall, J.E.' 4 # _citation.id primary _citation.title 'Structural basis of the C1q/C1s interaction and its central role in assembly of the C1 complex of complement activation.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 13916 _citation.page_last 13920 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23922389 _citation.pdbx_database_id_DOI 10.1073/pnas.1311113110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Venkatraman Girija, U.' 1 primary 'Gingras, A.R.' 2 primary 'Marshall, J.E.' 3 primary 'Panchal, R.' 4 primary 'Sheikh, M.A.' 5 primary 'Gal, P.' 6 primary 'Schwaeble, W.J.' 7 primary 'Mitchell, D.A.' 8 primary 'Moody, P.C.' 9 primary 'Wallis, R.' 10 # _cell.length_a 143.040 _cell.length_b 58.590 _cell.length_c 51.210 _cell.angle_alpha 90.000 _cell.angle_beta 91.120 _cell.angle_gamma 90.000 _cell.entry_id 4LOT _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 4LOT _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Complement C1s subcomponent heavy chain' _entity.formula_weight 27508.744 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.4.21.42 _entity.pdbx_mutation ? _entity.pdbx_fragment 'CUB2-CCP1-CCP2 fragment (unp residues 175-423)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'C1 esterase, Complement component 1 subcomponent s' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHG FPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMPCPKEDTPNSVWEPAKAKYVFRDVVQITCLDGFEVVEGRVGA TSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVL GPELPKCVP ; _entity_poly.pdbx_seq_one_letter_code_can ;CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHG FPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMPCPKEDTPNSVWEPAKAKYVFRDVVQITCLDGFEVVEGRVGA TSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVL GPELPKCVP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 SER n 1 3 GLY n 1 4 ASP n 1 5 VAL n 1 6 PHE n 1 7 THR n 1 8 ALA n 1 9 LEU n 1 10 ILE n 1 11 GLY n 1 12 GLU n 1 13 ILE n 1 14 ALA n 1 15 SER n 1 16 PRO n 1 17 ASN n 1 18 TYR n 1 19 PRO n 1 20 LYS n 1 21 PRO n 1 22 TYR n 1 23 PRO n 1 24 GLU n 1 25 ASN n 1 26 SER n 1 27 ARG n 1 28 CYS n 1 29 GLU n 1 30 TYR n 1 31 GLN n 1 32 ILE n 1 33 ARG n 1 34 LEU n 1 35 GLU n 1 36 LYS n 1 37 GLY n 1 38 PHE n 1 39 GLN n 1 40 VAL n 1 41 VAL n 1 42 VAL n 1 43 THR n 1 44 LEU n 1 45 ARG n 1 46 ARG n 1 47 GLU n 1 48 ASP n 1 49 PHE n 1 50 ASP n 1 51 VAL n 1 52 GLU n 1 53 ALA n 1 54 ALA n 1 55 ASP n 1 56 SER n 1 57 ALA n 1 58 GLY n 1 59 ASN n 1 60 CYS n 1 61 LEU n 1 62 ASP n 1 63 SER n 1 64 LEU n 1 65 VAL n 1 66 PHE n 1 67 VAL n 1 68 ALA n 1 69 GLY n 1 70 ASP n 1 71 ARG n 1 72 GLN n 1 73 PHE n 1 74 GLY n 1 75 PRO n 1 76 TYR n 1 77 CYS n 1 78 GLY n 1 79 HIS n 1 80 GLY n 1 81 PHE n 1 82 PRO n 1 83 GLY n 1 84 PRO n 1 85 LEU n 1 86 ASN n 1 87 ILE n 1 88 GLU n 1 89 THR n 1 90 LYS n 1 91 SER n 1 92 ASN n 1 93 ALA n 1 94 LEU n 1 95 ASP n 1 96 ILE n 1 97 ILE n 1 98 PHE n 1 99 GLN n 1 100 THR n 1 101 ASP n 1 102 LEU n 1 103 THR n 1 104 GLY n 1 105 GLN n 1 106 LYS n 1 107 LYS n 1 108 GLY n 1 109 TRP n 1 110 LYS n 1 111 LEU n 1 112 ARG n 1 113 TYR n 1 114 HIS n 1 115 GLY n 1 116 ASP n 1 117 PRO n 1 118 MET n 1 119 PRO n 1 120 CYS n 1 121 PRO n 1 122 LYS n 1 123 GLU n 1 124 ASP n 1 125 THR n 1 126 PRO n 1 127 ASN n 1 128 SER n 1 129 VAL n 1 130 TRP n 1 131 GLU n 1 132 PRO n 1 133 ALA n 1 134 LYS n 1 135 ALA n 1 136 LYS n 1 137 TYR n 1 138 VAL n 1 139 PHE n 1 140 ARG n 1 141 ASP n 1 142 VAL n 1 143 VAL n 1 144 GLN n 1 145 ILE n 1 146 THR n 1 147 CYS n 1 148 LEU n 1 149 ASP n 1 150 GLY n 1 151 PHE n 1 152 GLU n 1 153 VAL n 1 154 VAL n 1 155 GLU n 1 156 GLY n 1 157 ARG n 1 158 VAL n 1 159 GLY n 1 160 ALA n 1 161 THR n 1 162 SER n 1 163 PHE n 1 164 TYR n 1 165 SER n 1 166 THR n 1 167 CYS n 1 168 GLN n 1 169 SER n 1 170 ASN n 1 171 GLY n 1 172 LYS n 1 173 TRP n 1 174 SER n 1 175 ASN n 1 176 SER n 1 177 LYS n 1 178 LEU n 1 179 LYS n 1 180 CYS n 1 181 GLN n 1 182 PRO n 1 183 VAL n 1 184 ASP n 1 185 CYS n 1 186 GLY n 1 187 ILE n 1 188 PRO n 1 189 GLU n 1 190 SER n 1 191 ILE n 1 192 GLU n 1 193 ASN n 1 194 GLY n 1 195 LYS n 1 196 VAL n 1 197 GLU n 1 198 ASP n 1 199 PRO n 1 200 GLU n 1 201 SER n 1 202 THR n 1 203 LEU n 1 204 PHE n 1 205 GLY n 1 206 SER n 1 207 VAL n 1 208 ILE n 1 209 ARG n 1 210 TYR n 1 211 THR n 1 212 CYS n 1 213 GLU n 1 214 GLU n 1 215 PRO n 1 216 TYR n 1 217 TYR n 1 218 TYR n 1 219 MET n 1 220 GLU n 1 221 ASN n 1 222 GLY n 1 223 GLY n 1 224 GLY n 1 225 GLY n 1 226 GLU n 1 227 TYR n 1 228 HIS n 1 229 CYS n 1 230 ALA n 1 231 GLY n 1 232 ASN n 1 233 GLY n 1 234 SER n 1 235 TRP n 1 236 VAL n 1 237 ASN n 1 238 GLU n 1 239 VAL n 1 240 LEU n 1 241 GLY n 1 242 PRO n 1 243 GLU n 1 244 LEU n 1 245 PRO n 1 246 LYS n 1 247 CYS n 1 248 VAL n 1 249 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene C1S _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C1S_HUMAN _struct_ref.pdbx_db_accession P09871 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHG FPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMPCPKEDTPNSVWEPAKAKYVFRDVVQITCLDGFEVVEGRVGA TSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVL GPELPKCVP ; _struct_ref.pdbx_align_begin 175 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LOT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P09871 _struct_ref_seq.db_align_beg 175 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 423 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 160 _struct_ref_seq.pdbx_auth_seq_align_end 408 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LOT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.90 _exptl_crystal.density_percent_sol 68.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '24% PEG 8K in Bis-tris propane-HCL, containing 200 mM potassium citrate, pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LOT _reflns.observed_criterion_sigma_I 2.1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.22 _reflns.d_resolution_high 2.92 _reflns.number_obs 9420 _reflns.number_all 9504 _reflns.percent_possible_obs 94.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.92 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 94.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 4LOT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.9200 _refine.ls_d_res_low 54.2170 _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 92.6700 _refine.ls_number_reflns_obs 8686 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2658 _refine.ls_R_factor_R_work ? _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2923 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0900 _refine.ls_number_reflns_R_free 442 _refine.ls_number_reflns_R_work 8188 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 132.9335 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.5938 _refine.B_iso_max 300.280 _refine.B_iso_min 72.910 _refine.pdbx_overall_phase_error 43.2200 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1908 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1908 _refine_hist.d_res_high 2.9200 _refine_hist.d_res_low 54.2170 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1965 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2661 0.959 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 275 0.073 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 356 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 720 15.246 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.9307 3.3546 . . . . 0.3923 0.4221 . . . 2825 . 'X-RAY DIFFRACTION' . 3.3546 4.2258 . . . . 0.2898 0.3049 . . . 2844 . 'X-RAY DIFFRACTION' . 4.2258 41.2533 . . . . 0.2186 0.2660 . . . 2926 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4LOT _struct.title 'C1s CUB2-CCP1-CCP2' _struct.pdbx_descriptor 'Complement C1s subcomponent heavy chain (E.C.3.4.21.42)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LOT _struct_keywords.text 'CUB domain, CCP domain, Complement C1s, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details 'biological unit is the same as asym.' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 160 A CYS 187 1_555 ? ? ? ? ? ? ? 2.032 ? disulf2 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 219 A CYS 236 1_555 ? ? ? ? ? ? ? 2.030 ? disulf3 disulf ? ? A CYS 120 SG ? ? ? 1_555 A CYS 167 SG ? ? A CYS 279 A CYS 326 1_555 ? ? ? ? ? ? ? 2.014 ? disulf4 disulf ? ? A CYS 147 SG ? ? ? 1_555 A CYS 180 SG ? ? A CYS 306 A CYS 339 1_555 ? ? ? ? ? ? ? 2.034 ? disulf5 disulf ? ? A CYS 185 SG ? ? ? 1_555 A CYS 229 SG ? ? A CYS 344 A CYS 388 1_555 ? ? ? ? ? ? ? 2.030 ? disulf6 disulf ? ? A CYS 212 SG ? ? ? 1_555 A CYS 247 SG ? ? A CYS 371 A CYS 406 1_555 ? ? ? ? ? ? ? 2.032 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 18 A . ? TYR 177 A PRO 19 A ? PRO 178 A 1 -5.46 2 GLY 74 A . ? GLY 233 A PRO 75 A ? PRO 234 A 1 -6.08 3 GLU 131 A . ? GLU 290 A PRO 132 A ? PRO 291 A 1 0.20 4 GLU 214 A . ? GLU 373 A PRO 215 A ? PRO 374 A 1 -1.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 3 ? D ? 2 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? PHE A 6 ? VAL A 164 PHE A 165 A 2 ARG A 27 ? ARG A 33 ? ARG A 186 ARG A 192 A 3 ALA A 93 ? GLN A 99 ? ALA A 252 GLN A 258 A 4 SER A 63 ? ALA A 68 ? SER A 222 ALA A 227 A 5 ARG A 71 ? TYR A 76 ? ARG A 230 TYR A 235 B 1 ILE A 10 ? ALA A 14 ? ILE A 169 ALA A 173 B 2 TRP A 109 ? PRO A 117 ? TRP A 268 PRO A 276 B 3 PHE A 38 ? PHE A 49 ? PHE A 197 PHE A 208 B 4 ASN A 86 ? GLU A 88 ? ASN A 245 GLU A 247 C 1 SER A 128 ? GLU A 131 ? SER A 287 GLU A 290 C 2 VAL A 142 ? CYS A 147 ? VAL A 301 CYS A 306 C 3 SER A 162 ? THR A 166 ? SER A 321 THR A 325 D 1 PHE A 151 ? VAL A 153 ? PHE A 310 VAL A 312 D 2 CYS A 180 ? PRO A 182 ? CYS A 339 PRO A 341 E 1 GLY A 194 ? VAL A 196 ? GLY A 353 VAL A 355 E 2 VAL A 207 ? CYS A 212 ? VAL A 366 CYS A 371 E 3 GLU A 226 ? ALA A 230 ? GLU A 385 ALA A 389 E 4 SER A 234 ? VAL A 236 ? SER A 393 VAL A 395 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 6 ? N PHE A 165 O GLN A 31 ? O GLN A 190 A 2 3 N ILE A 32 ? N ILE A 191 O LEU A 94 ? O LEU A 253 A 3 4 O GLN A 99 ? O GLN A 258 N SER A 63 ? N SER A 222 A 4 5 N PHE A 66 ? N PHE A 225 O PHE A 73 ? O PHE A 232 B 1 2 N ILE A 13 ? N ILE A 172 O LEU A 111 ? O LEU A 270 B 2 3 O ARG A 112 ? O ARG A 271 N THR A 43 ? N THR A 202 B 3 4 N VAL A 42 ? N VAL A 201 O ILE A 87 ? O ILE A 246 C 1 2 N GLU A 131 ? N GLU A 290 O GLN A 144 ? O GLN A 303 C 2 3 N ILE A 145 ? N ILE A 304 O PHE A 163 ? O PHE A 322 D 1 2 N GLU A 152 ? N GLU A 311 O GLN A 181 ? O GLN A 340 E 1 2 N LYS A 195 ? N LYS A 354 O THR A 211 ? O THR A 370 E 2 3 N ILE A 208 ? N ILE A 367 O TYR A 227 ? O TYR A 386 E 3 4 N HIS A 228 ? N HIS A 387 O VAL A 236 ? O VAL A 395 # _atom_sites.entry_id 4LOT _atom_sites.fract_transf_matrix[1][1] 0.006991 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000137 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017068 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019531 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 160 160 CYS CYS A . n A 1 2 SER 2 161 161 SER SER A . n A 1 3 GLY 3 162 162 GLY GLY A . n A 1 4 ASP 4 163 163 ASP ASP A . n A 1 5 VAL 5 164 164 VAL VAL A . n A 1 6 PHE 6 165 165 PHE PHE A . n A 1 7 THR 7 166 166 THR THR A . n A 1 8 ALA 8 167 167 ALA ALA A . n A 1 9 LEU 9 168 168 LEU LEU A . n A 1 10 ILE 10 169 169 ILE ILE A . n A 1 11 GLY 11 170 170 GLY GLY A . n A 1 12 GLU 12 171 171 GLU GLU A . n A 1 13 ILE 13 172 172 ILE ILE A . n A 1 14 ALA 14 173 173 ALA ALA A . n A 1 15 SER 15 174 174 SER SER A . n A 1 16 PRO 16 175 175 PRO PRO A . n A 1 17 ASN 17 176 176 ASN ASN A . n A 1 18 TYR 18 177 177 TYR TYR A . n A 1 19 PRO 19 178 178 PRO PRO A . n A 1 20 LYS 20 179 179 LYS LYS A . n A 1 21 PRO 21 180 180 PRO PRO A . n A 1 22 TYR 22 181 181 TYR TYR A . n A 1 23 PRO 23 182 182 PRO PRO A . n A 1 24 GLU 24 183 183 GLU GLU A . n A 1 25 ASN 25 184 184 ASN ASN A . n A 1 26 SER 26 185 185 SER SER A . n A 1 27 ARG 27 186 186 ARG ARG A . n A 1 28 CYS 28 187 187 CYS CYS A . n A 1 29 GLU 29 188 188 GLU GLU A . n A 1 30 TYR 30 189 189 TYR TYR A . n A 1 31 GLN 31 190 190 GLN GLN A . n A 1 32 ILE 32 191 191 ILE ILE A . n A 1 33 ARG 33 192 192 ARG ARG A . n A 1 34 LEU 34 193 193 LEU LEU A . n A 1 35 GLU 35 194 194 GLU GLU A . n A 1 36 LYS 36 195 195 LYS LYS A . n A 1 37 GLY 37 196 196 GLY GLY A . n A 1 38 PHE 38 197 197 PHE PHE A . n A 1 39 GLN 39 198 198 GLN GLN A . n A 1 40 VAL 40 199 199 VAL VAL A . n A 1 41 VAL 41 200 200 VAL VAL A . n A 1 42 VAL 42 201 201 VAL VAL A . n A 1 43 THR 43 202 202 THR THR A . n A 1 44 LEU 44 203 203 LEU LEU A . n A 1 45 ARG 45 204 204 ARG ARG A . n A 1 46 ARG 46 205 205 ARG ARG A . n A 1 47 GLU 47 206 206 GLU GLU A . n A 1 48 ASP 48 207 207 ASP ASP A . n A 1 49 PHE 49 208 208 PHE PHE A . n A 1 50 ASP 50 209 209 ASP ASP A . n A 1 51 VAL 51 210 210 VAL VAL A . n A 1 52 GLU 52 211 211 GLU GLU A . n A 1 53 ALA 53 212 212 ALA ALA A . n A 1 54 ALA 54 213 213 ALA ALA A . n A 1 55 ASP 55 214 214 ASP ASP A . n A 1 56 SER 56 215 215 SER SER A . n A 1 57 ALA 57 216 216 ALA ALA A . n A 1 58 GLY 58 217 217 GLY GLY A . n A 1 59 ASN 59 218 218 ASN ASN A . n A 1 60 CYS 60 219 219 CYS CYS A . n A 1 61 LEU 61 220 220 LEU LEU A . n A 1 62 ASP 62 221 221 ASP ASP A . n A 1 63 SER 63 222 222 SER SER A . n A 1 64 LEU 64 223 223 LEU LEU A . n A 1 65 VAL 65 224 224 VAL VAL A . n A 1 66 PHE 66 225 225 PHE PHE A . n A 1 67 VAL 67 226 226 VAL VAL A . n A 1 68 ALA 68 227 227 ALA ALA A . n A 1 69 GLY 69 228 228 GLY GLY A . n A 1 70 ASP 70 229 229 ASP ASP A . n A 1 71 ARG 71 230 230 ARG ARG A . n A 1 72 GLN 72 231 231 GLN GLN A . n A 1 73 PHE 73 232 232 PHE PHE A . n A 1 74 GLY 74 233 233 GLY GLY A . n A 1 75 PRO 75 234 234 PRO PRO A . n A 1 76 TYR 76 235 235 TYR TYR A . n A 1 77 CYS 77 236 236 CYS CYS A . n A 1 78 GLY 78 237 237 GLY GLY A . n A 1 79 HIS 79 238 238 HIS HIS A . n A 1 80 GLY 80 239 239 GLY GLY A . n A 1 81 PHE 81 240 240 PHE PHE A . n A 1 82 PRO 82 241 241 PRO PRO A . n A 1 83 GLY 83 242 242 GLY GLY A . n A 1 84 PRO 84 243 243 PRO PRO A . n A 1 85 LEU 85 244 244 LEU LEU A . n A 1 86 ASN 86 245 245 ASN ASN A . n A 1 87 ILE 87 246 246 ILE ILE A . n A 1 88 GLU 88 247 247 GLU GLU A . n A 1 89 THR 89 248 248 THR THR A . n A 1 90 LYS 90 249 249 LYS LYS A . n A 1 91 SER 91 250 250 SER SER A . n A 1 92 ASN 92 251 251 ASN ASN A . n A 1 93 ALA 93 252 252 ALA ALA A . n A 1 94 LEU 94 253 253 LEU LEU A . n A 1 95 ASP 95 254 254 ASP ASP A . n A 1 96 ILE 96 255 255 ILE ILE A . n A 1 97 ILE 97 256 256 ILE ILE A . n A 1 98 PHE 98 257 257 PHE PHE A . n A 1 99 GLN 99 258 258 GLN GLN A . n A 1 100 THR 100 259 259 THR THR A . n A 1 101 ASP 101 260 260 ASP ASP A . n A 1 102 LEU 102 261 261 LEU LEU A . n A 1 103 THR 103 262 262 THR THR A . n A 1 104 GLY 104 263 263 GLY GLY A . n A 1 105 GLN 105 264 264 GLN GLN A . n A 1 106 LYS 106 265 265 LYS LYS A . n A 1 107 LYS 107 266 266 LYS LYS A . n A 1 108 GLY 108 267 267 GLY GLY A . n A 1 109 TRP 109 268 268 TRP TRP A . n A 1 110 LYS 110 269 269 LYS LYS A . n A 1 111 LEU 111 270 270 LEU LEU A . n A 1 112 ARG 112 271 271 ARG ARG A . n A 1 113 TYR 113 272 272 TYR TYR A . n A 1 114 HIS 114 273 273 HIS HIS A . n A 1 115 GLY 115 274 274 GLY GLY A . n A 1 116 ASP 116 275 275 ASP ASP A . n A 1 117 PRO 117 276 276 PRO PRO A . n A 1 118 MET 118 277 277 MET MET A . n A 1 119 PRO 119 278 278 PRO PRO A . n A 1 120 CYS 120 279 279 CYS CYS A . n A 1 121 PRO 121 280 280 PRO PRO A . n A 1 122 LYS 122 281 281 LYS LYS A . n A 1 123 GLU 123 282 282 GLU GLU A . n A 1 124 ASP 124 283 283 ASP ASP A . n A 1 125 THR 125 284 284 THR THR A . n A 1 126 PRO 126 285 285 PRO PRO A . n A 1 127 ASN 127 286 286 ASN ASN A . n A 1 128 SER 128 287 287 SER SER A . n A 1 129 VAL 129 288 288 VAL VAL A . n A 1 130 TRP 130 289 289 TRP TRP A . n A 1 131 GLU 131 290 290 GLU GLU A . n A 1 132 PRO 132 291 291 PRO PRO A . n A 1 133 ALA 133 292 292 ALA ALA A . n A 1 134 LYS 134 293 293 LYS LYS A . n A 1 135 ALA 135 294 294 ALA ALA A . n A 1 136 LYS 136 295 295 LYS LYS A . n A 1 137 TYR 137 296 296 TYR TYR A . n A 1 138 VAL 138 297 297 VAL VAL A . n A 1 139 PHE 139 298 298 PHE PHE A . n A 1 140 ARG 140 299 299 ARG ARG A . n A 1 141 ASP 141 300 300 ASP ASP A . n A 1 142 VAL 142 301 301 VAL VAL A . n A 1 143 VAL 143 302 302 VAL VAL A . n A 1 144 GLN 144 303 303 GLN GLN A . n A 1 145 ILE 145 304 304 ILE ILE A . n A 1 146 THR 146 305 305 THR THR A . n A 1 147 CYS 147 306 306 CYS CYS A . n A 1 148 LEU 148 307 307 LEU LEU A . n A 1 149 ASP 149 308 308 ASP ASP A . n A 1 150 GLY 150 309 309 GLY GLY A . n A 1 151 PHE 151 310 310 PHE PHE A . n A 1 152 GLU 152 311 311 GLU GLU A . n A 1 153 VAL 153 312 312 VAL VAL A . n A 1 154 VAL 154 313 313 VAL VAL A . n A 1 155 GLU 155 314 314 GLU GLU A . n A 1 156 GLY 156 315 315 GLY GLY A . n A 1 157 ARG 157 316 ? ? ? A . n A 1 158 VAL 158 317 ? ? ? A . n A 1 159 GLY 159 318 ? ? ? A . n A 1 160 ALA 160 319 319 ALA ALA A . n A 1 161 THR 161 320 320 THR THR A . n A 1 162 SER 162 321 321 SER SER A . n A 1 163 PHE 163 322 322 PHE PHE A . n A 1 164 TYR 164 323 323 TYR TYR A . n A 1 165 SER 165 324 324 SER SER A . n A 1 166 THR 166 325 325 THR THR A . n A 1 167 CYS 167 326 326 CYS CYS A . n A 1 168 GLN 168 327 327 GLN GLN A . n A 1 169 SER 169 328 328 SER SER A . n A 1 170 ASN 170 329 329 ASN ASN A . n A 1 171 GLY 171 330 330 GLY GLY A . n A 1 172 LYS 172 331 331 LYS LYS A . n A 1 173 TRP 173 332 332 TRP TRP A . n A 1 174 SER 174 333 333 SER SER A . n A 1 175 ASN 175 334 334 ASN ASN A . n A 1 176 SER 176 335 335 SER SER A . n A 1 177 LYS 177 336 336 LYS LYS A . n A 1 178 LEU 178 337 337 LEU LEU A . n A 1 179 LYS 179 338 338 LYS LYS A . n A 1 180 CYS 180 339 339 CYS CYS A . n A 1 181 GLN 181 340 340 GLN GLN A . n A 1 182 PRO 182 341 341 PRO PRO A . n A 1 183 VAL 183 342 342 VAL VAL A . n A 1 184 ASP 184 343 343 ASP ASP A . n A 1 185 CYS 185 344 344 CYS CYS A . n A 1 186 GLY 186 345 345 GLY GLY A . n A 1 187 ILE 187 346 346 ILE ILE A . n A 1 188 PRO 188 347 347 PRO PRO A . n A 1 189 GLU 189 348 348 GLU GLU A . n A 1 190 SER 190 349 349 SER SER A . n A 1 191 ILE 191 350 350 ILE ILE A . n A 1 192 GLU 192 351 351 GLU GLU A . n A 1 193 ASN 193 352 352 ASN ASN A . n A 1 194 GLY 194 353 353 GLY GLY A . n A 1 195 LYS 195 354 354 LYS LYS A . n A 1 196 VAL 196 355 355 VAL VAL A . n A 1 197 GLU 197 356 356 GLU GLU A . n A 1 198 ASP 198 357 357 ASP ASP A . n A 1 199 PRO 199 358 358 PRO PRO A . n A 1 200 GLU 200 359 359 GLU GLU A . n A 1 201 SER 201 360 360 SER SER A . n A 1 202 THR 202 361 361 THR THR A . n A 1 203 LEU 203 362 362 LEU LEU A . n A 1 204 PHE 204 363 363 PHE PHE A . n A 1 205 GLY 205 364 364 GLY GLY A . n A 1 206 SER 206 365 365 SER SER A . n A 1 207 VAL 207 366 366 VAL VAL A . n A 1 208 ILE 208 367 367 ILE ILE A . n A 1 209 ARG 209 368 368 ARG ARG A . n A 1 210 TYR 210 369 369 TYR TYR A . n A 1 211 THR 211 370 370 THR THR A . n A 1 212 CYS 212 371 371 CYS CYS A . n A 1 213 GLU 213 372 372 GLU GLU A . n A 1 214 GLU 214 373 373 GLU GLU A . n A 1 215 PRO 215 374 374 PRO PRO A . n A 1 216 TYR 216 375 375 TYR TYR A . n A 1 217 TYR 217 376 376 TYR TYR A . n A 1 218 TYR 218 377 377 TYR TYR A . n A 1 219 MET 219 378 378 MET MET A . n A 1 220 GLU 220 379 379 GLU GLU A . n A 1 221 ASN 221 380 380 ASN ASN A . n A 1 222 GLY 222 381 381 GLY GLY A . n A 1 223 GLY 223 382 382 GLY GLY A . n A 1 224 GLY 224 383 383 GLY GLY A . n A 1 225 GLY 225 384 384 GLY GLY A . n A 1 226 GLU 226 385 385 GLU GLU A . n A 1 227 TYR 227 386 386 TYR TYR A . n A 1 228 HIS 228 387 387 HIS HIS A . n A 1 229 CYS 229 388 388 CYS CYS A . n A 1 230 ALA 230 389 389 ALA ALA A . n A 1 231 GLY 231 390 390 GLY GLY A . n A 1 232 ASN 232 391 391 ASN ASN A . n A 1 233 GLY 233 392 392 GLY GLY A . n A 1 234 SER 234 393 393 SER SER A . n A 1 235 TRP 235 394 394 TRP TRP A . n A 1 236 VAL 236 395 395 VAL VAL A . n A 1 237 ASN 237 396 396 ASN ASN A . n A 1 238 GLU 238 397 397 GLU GLU A . n A 1 239 VAL 239 398 398 VAL VAL A . n A 1 240 LEU 240 399 399 LEU LEU A . n A 1 241 GLY 241 400 400 GLY GLY A . n A 1 242 PRO 242 401 401 PRO PRO A . n A 1 243 GLU 243 402 402 GLU GLU A . n A 1 244 LEU 244 403 403 LEU LEU A . n A 1 245 PRO 245 404 404 PRO PRO A . n A 1 246 LYS 246 405 405 LYS LYS A . n A 1 247 CYS 247 406 406 CYS CYS A . n A 1 248 VAL 248 407 407 VAL VAL A . n A 1 249 PRO 249 408 408 PRO PRO A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-07 2 'Structure model' 1 1 2013-08-28 3 'Structure model' 1 2 2013-09-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -20.0664 -16.5327 57.4327 1.6442 0.8489 0.5562 -0.2545 0.0640 -0.0268 7.1266 6.1668 6.2958 2.6791 0.7102 0.3082 0.0019 0.2083 -0.2232 0.0245 -0.5330 -0.2630 -0.2419 0.5836 -1.6468 'X-RAY DIFFRACTION' 2 ? refined 26.2105 3.8190 71.7088 1.4864 0.9012 0.7202 -0.3884 0.0599 0.0132 8.1951 4.1981 9.7126 4.3666 8.5810 5.7889 -0.9003 0.4237 0.4576 0.5441 0.5372 0.4161 -0.3698 -0.7550 1.2134 'X-RAY DIFFRACTION' 3 ? refined 43.4545 6.7428 75.0960 1.9015 2.1536 0.7488 0.1454 0.1748 -0.2062 2.0009 4.8810 7.0362 5.0346 7.6837 5.4439 -0.7119 0.1032 0.6120 0.6663 -0.2412 0.2074 0.2965 1.8438 0.1544 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 0 ;chain 'A' and (resid 160 through 286 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 0 ;chain 'A' and (resid 287 through 389 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 0 A 0 ;chain 'A' and (resid 390 through 408 ) ; ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX 1.8.2_1309 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 StructureStudio . ? ? ? ? 'data collection' ? ? ? 4 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5 SCALA . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 175 ? ? -37.66 142.29 2 1 PRO A 178 ? ? -88.74 44.40 3 1 ASP A 214 ? ? -78.51 -164.82 4 1 ASP A 260 ? ? -122.56 -91.05 5 1 GLN A 264 ? ? 13.86 36.31 6 1 PRO A 285 ? ? -71.33 -71.24 7 1 ARG A 299 ? ? 76.04 -18.25 8 1 LEU A 307 ? ? -68.82 -173.92 9 1 GLU A 372 ? ? -69.94 97.74 10 1 PRO A 374 ? ? -98.06 32.13 11 1 MET A 378 ? ? -57.14 -78.05 12 1 ASN A 380 ? ? -96.60 -60.96 13 1 VAL A 398 ? ? -98.60 -64.18 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 316 ? A ARG 157 2 1 Y 1 A VAL 317 ? A VAL 158 3 1 Y 1 A GLY 318 ? A GLY 159 # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.type ? _pdbx_reflns_twin.operator -h,-k,l _pdbx_reflns_twin.fraction 0.050 #