data_4LSC # _entry.id 4LSC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LSC pdb_00004lsc 10.2210/pdb4lsc/pdb RCSB RCSB081024 ? ? WWPDB D_1000081024 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RIZ 'Isolated steroid receptor ligand binding domain in its free form' unspecified PDB 3RJ0 'Isolated steroid receptor ligand binding domain bound to brassinolide' unspecified PDB 4LSA 'Isolated steroid receptor ligand binding domain mutant bound to brassinolide' unspecified PDB 4LSX 'Steroid receptor ligand binding domain bound to SERK1 co-receptor ectodomain' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LSC _pdbx_database_status.recvd_initial_deposition_date 2013-07-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Santiago, J.' 1 'Henzler, C.' 2 'Hothorn, M.' 3 # _citation.id primary _citation.title 'Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.' _citation.journal_abbrev Science _citation.journal_volume 341 _citation.page_first 889 _citation.page_last 892 _citation.year 2013 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23929946 _citation.pdbx_database_id_DOI 10.1126/science.1242468 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Santiago, J.' 1 ? primary 'Henzler, C.' 2 ? primary 'Hothorn, M.' 3 ? # _cell.entry_id 4LSC _cell.length_a 72.630 _cell.length_b 72.630 _cell.length_c 80.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LSC _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Somatic embryogenesis receptor kinase 1' 24380.256 1 ? 'N115D, N163Q' 'receptor ectodomain/LRR-domain (UNP residues 29-788)' ? 2 branched man ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 4 water nat water 18.015 148 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AtSERK1, Somatic embryogenesis receptor-like kinase 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AGSSMASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYL ELYSNNITGPIPSNLGDLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTQITTLQVLDLSNNRLS GSVPDNGSFSLFTPISFANNLDLCGPVTSHPCPGSLENLYFQGAWSHPQFEKGSHHHHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;AGSSMASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYL ELYSNNITGPIPSNLGDLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTQITTLQVLDLSNNRLS GSVPDNGSFSLFTPISFANNLDLCGPVTSHPCPGSLENLYFQGAWSHPQFEKGSHHHHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 MET n 1 6 ALA n 1 7 SER n 1 8 ALA n 1 9 ASN n 1 10 LEU n 1 11 GLU n 1 12 GLY n 1 13 ASP n 1 14 ALA n 1 15 LEU n 1 16 HIS n 1 17 THR n 1 18 LEU n 1 19 ARG n 1 20 VAL n 1 21 THR n 1 22 LEU n 1 23 VAL n 1 24 ASP n 1 25 PRO n 1 26 ASN n 1 27 ASN n 1 28 VAL n 1 29 LEU n 1 30 GLN n 1 31 SER n 1 32 TRP n 1 33 ASP n 1 34 PRO n 1 35 THR n 1 36 LEU n 1 37 VAL n 1 38 ASN n 1 39 PRO n 1 40 CYS n 1 41 THR n 1 42 TRP n 1 43 PHE n 1 44 HIS n 1 45 VAL n 1 46 THR n 1 47 CYS n 1 48 ASN n 1 49 ASN n 1 50 GLU n 1 51 ASN n 1 52 SER n 1 53 VAL n 1 54 ILE n 1 55 ARG n 1 56 VAL n 1 57 ASP n 1 58 LEU n 1 59 GLY n 1 60 ASN n 1 61 ALA n 1 62 GLU n 1 63 LEU n 1 64 SER n 1 65 GLY n 1 66 HIS n 1 67 LEU n 1 68 VAL n 1 69 PRO n 1 70 GLU n 1 71 LEU n 1 72 GLY n 1 73 VAL n 1 74 LEU n 1 75 LYS n 1 76 ASN n 1 77 LEU n 1 78 GLN n 1 79 TYR n 1 80 LEU n 1 81 GLU n 1 82 LEU n 1 83 TYR n 1 84 SER n 1 85 ASN n 1 86 ASN n 1 87 ILE n 1 88 THR n 1 89 GLY n 1 90 PRO n 1 91 ILE n 1 92 PRO n 1 93 SER n 1 94 ASN n 1 95 LEU n 1 96 GLY n 1 97 ASP n 1 98 LEU n 1 99 THR n 1 100 ASN n 1 101 LEU n 1 102 VAL n 1 103 SER n 1 104 LEU n 1 105 ASP n 1 106 LEU n 1 107 TYR n 1 108 LEU n 1 109 ASN n 1 110 SER n 1 111 PHE n 1 112 SER n 1 113 GLY n 1 114 PRO n 1 115 ILE n 1 116 PRO n 1 117 GLU n 1 118 SER n 1 119 LEU n 1 120 GLY n 1 121 LYS n 1 122 LEU n 1 123 SER n 1 124 LYS n 1 125 LEU n 1 126 ARG n 1 127 PHE n 1 128 LEU n 1 129 ARG n 1 130 LEU n 1 131 ASN n 1 132 ASN n 1 133 ASN n 1 134 SER n 1 135 LEU n 1 136 THR n 1 137 GLY n 1 138 SER n 1 139 ILE n 1 140 PRO n 1 141 MET n 1 142 SER n 1 143 LEU n 1 144 THR n 1 145 GLN n 1 146 ILE n 1 147 THR n 1 148 THR n 1 149 LEU n 1 150 GLN n 1 151 VAL n 1 152 LEU n 1 153 ASP n 1 154 LEU n 1 155 SER n 1 156 ASN n 1 157 ASN n 1 158 ARG n 1 159 LEU n 1 160 SER n 1 161 GLY n 1 162 SER n 1 163 VAL n 1 164 PRO n 1 165 ASP n 1 166 ASN n 1 167 GLY n 1 168 SER n 1 169 PHE n 1 170 SER n 1 171 LEU n 1 172 PHE n 1 173 THR n 1 174 PRO n 1 175 ILE n 1 176 SER n 1 177 PHE n 1 178 ALA n 1 179 ASN n 1 180 ASN n 1 181 LEU n 1 182 ASP n 1 183 LEU n 1 184 CYS n 1 185 GLY n 1 186 PRO n 1 187 VAL n 1 188 THR n 1 189 SER n 1 190 HIS n 1 191 PRO n 1 192 CYS n 1 193 PRO n 1 194 GLY n 1 195 SER n 1 196 LEU n 1 197 GLU n 1 198 ASN n 1 199 LEU n 1 200 TYR n 1 201 PHE n 1 202 GLN n 1 203 GLY n 1 204 ALA n 1 205 TRP n 1 206 SER n 1 207 HIS n 1 208 PRO n 1 209 GLN n 1 210 PHE n 1 211 GLU n 1 212 LYS n 1 213 GLY n 1 214 SER n 1 215 HIS n 1 216 HIS n 1 217 HIS n 1 218 HIS n 1 219 HIS n 1 220 HIS n 1 221 HIS n 1 222 HIS n 1 223 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'At1g71830, F14O23.21, F14O23_24, SERK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'col 0' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'cabbage looper' _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Tnao38 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid/baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pBAC-6 mod.' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SERK1_ARATH _struct_ref.pdbx_db_accession Q94AG2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSN NITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPD NGSFSLFTPISFANNLDLCGPVTSHPCPGS ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LSC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 195 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q94AG2 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 213 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 213 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LSC ALA A 1 ? UNP Q94AG2 ? ? 'expression tag' 19 1 1 4LSC GLY A 2 ? UNP Q94AG2 ? ? 'expression tag' 20 2 1 4LSC SER A 3 ? UNP Q94AG2 ? ? 'expression tag' 21 3 1 4LSC SER A 4 ? UNP Q94AG2 ? ? 'expression tag' 22 4 1 4LSC MET A 5 ? UNP Q94AG2 ? ? 'expression tag' 23 5 1 4LSC ASP A 97 ? UNP Q94AG2 ASN 115 'engineered mutation' 115 6 1 4LSC GLN A 145 ? UNP Q94AG2 ASN 163 'engineered mutation' 163 7 1 4LSC LEU A 196 ? UNP Q94AG2 ? ? 'expression tag' 214 8 1 4LSC GLU A 197 ? UNP Q94AG2 ? ? 'expression tag' 215 9 1 4LSC ASN A 198 ? UNP Q94AG2 ? ? 'expression tag' 216 10 1 4LSC LEU A 199 ? UNP Q94AG2 ? ? 'expression tag' 217 11 1 4LSC TYR A 200 ? UNP Q94AG2 ? ? 'expression tag' 218 12 1 4LSC PHE A 201 ? UNP Q94AG2 ? ? 'expression tag' 219 13 1 4LSC GLN A 202 ? UNP Q94AG2 ? ? 'expression tag' 220 14 1 4LSC GLY A 203 ? UNP Q94AG2 ? ? 'expression tag' 221 15 1 4LSC ALA A 204 ? UNP Q94AG2 ? ? 'expression tag' 222 16 1 4LSC TRP A 205 ? UNP Q94AG2 ? ? 'expression tag' 223 17 1 4LSC SER A 206 ? UNP Q94AG2 ? ? 'expression tag' 224 18 1 4LSC HIS A 207 ? UNP Q94AG2 ? ? 'expression tag' 225 19 1 4LSC PRO A 208 ? UNP Q94AG2 ? ? 'expression tag' 226 20 1 4LSC GLN A 209 ? UNP Q94AG2 ? ? 'expression tag' 227 21 1 4LSC PHE A 210 ? UNP Q94AG2 ? ? 'expression tag' 228 22 1 4LSC GLU A 211 ? UNP Q94AG2 ? ? 'expression tag' 229 23 1 4LSC LYS A 212 ? UNP Q94AG2 ? ? 'expression tag' 230 24 1 4LSC GLY A 213 ? UNP Q94AG2 ? ? 'expression tag' 231 25 1 4LSC SER A 214 ? UNP Q94AG2 ? ? 'expression tag' 232 26 1 4LSC HIS A 215 ? UNP Q94AG2 ? ? 'expression tag' 233 27 1 4LSC HIS A 216 ? UNP Q94AG2 ? ? 'expression tag' 234 28 1 4LSC HIS A 217 ? UNP Q94AG2 ? ? 'expression tag' 235 29 1 4LSC HIS A 218 ? UNP Q94AG2 ? ? 'expression tag' 236 30 1 4LSC HIS A 219 ? UNP Q94AG2 ? ? 'expression tag' 237 31 1 4LSC HIS A 220 ? UNP Q94AG2 ? ? 'expression tag' 238 32 1 4LSC HIS A 221 ? UNP Q94AG2 ? ? 'expression tag' 239 33 1 4LSC HIS A 222 ? UNP Q94AG2 ? ? 'expression tag' 240 34 1 4LSC HIS A 223 ? UNP Q94AG2 ? ? 'expression tag' 241 35 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LSC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 51.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.7 M sodium malonate, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 PIXEL 'DECTRIS PILATUS 6M' 2013-05-18 ? 2 PIXEL 'DECTRIS PILATUS 6M' 2013-05-18 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'double crystal Si(111)' 'SINGLE WAVELENGTH' x-ray 2 1 M 'double crystal Si(111)' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97794 1.0 2 1.90021 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SLS BEAMLINE X10SA' SLS X10SA ? 0.97794 2 SYNCHROTRON 'SLS BEAMLINE X10SA' SLS X10SA ? 1.90021 # _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LSC _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 49.7 _reflns.d_resolution_high 1.529 _reflns.number_obs 36620 _reflns.number_all 36620 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value 0.072 _reflns.pdbx_netI_over_sigmaI 16.12 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1,2 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.529 _reflns_shell.d_res_low 1.57 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 1.01 _reflns_shell.pdbx_Rsym_value 0.957 _reflns_shell.meanI_over_sigI_obs 2.15 _reflns_shell.pdbx_redundancy 9.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LSC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36613 _refine.ls_number_reflns_all 36620 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.99 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.673 _refine.ls_d_res_high 1.529 _refine.ls_percent_reflns_obs 99.97 _refine.ls_R_factor_obs 0.1679 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1674 _refine.ls_R_factor_R_free 0.1772 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1830 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1OGQ' _refine.pdbx_method_to_determine_struct MR-SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.16 _refine.pdbx_overall_phase_error 17.99 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1399 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 77 _refine_hist.number_atoms_solvent 148 _refine_hist.number_atoms_total 1624 _refine_hist.d_res_high 1.529 _refine_hist.d_res_low 49.673 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 1575 'X-RAY DIFFRACTION' ? f_angle_d 1.421 ? ? 2183 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.259 ? ? 596 'X-RAY DIFFRACTION' ? f_chiral_restr 0.076 ? ? 280 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 275 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.5292 1.5705 2681 0.2310 100.00 0.2394 . . 124 . . . . 'X-RAY DIFFRACTION' . 1.5705 1.6167 2673 0.2177 100.00 0.2554 . . 156 . . . . 'X-RAY DIFFRACTION' . 1.6167 1.6689 2615 0.1903 100.00 0.2036 . . 150 . . . . 'X-RAY DIFFRACTION' . 1.6689 1.7286 2708 0.1834 100.00 0.1909 . . 124 . . . . 'X-RAY DIFFRACTION' . 1.7286 1.7978 2667 0.1805 100.00 0.2058 . . 133 . . . . 'X-RAY DIFFRACTION' . 1.7978 1.8796 2664 0.1668 100.00 0.1955 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.8796 1.9787 2689 0.1625 100.00 0.1884 . . 123 . . . . 'X-RAY DIFFRACTION' . 1.9787 2.1027 2674 0.1494 100.00 0.1748 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.1027 2.2650 2692 0.1485 100.00 0.1526 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.2650 2.4930 2651 0.1531 100.00 0.1629 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.4930 2.8537 2684 0.1633 100.00 0.1942 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.8537 3.5952 2676 0.1689 100.00 0.1658 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.5952 49.6990 2709 0.1710 100.00 0.1708 . . 154 . . . . # _struct.entry_id 4LSC _struct.title 'Isolated SERK1 co-receptor ectodomain at high resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LSC _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'LRR-domain, membrane co-receptor, brassinosteroid binding, N-glycosylation, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 9 ? THR A 21 ? ASN A 27 THR A 39 1 ? 13 HELX_P HELX_P2 2 VAL A 68 ? LEU A 74 ? VAL A 86 LEU A 92 5 ? 7 HELX_P HELX_P3 3 ASN A 94 ? LEU A 98 ? ASN A 112 LEU A 116 5 ? 5 HELX_P HELX_P4 4 PRO A 116 ? LEU A 122 ? PRO A 134 LEU A 140 5 ? 7 HELX_P HELX_P5 5 PRO A 140 ? ILE A 146 ? PRO A 158 ILE A 164 5 ? 7 HELX_P HELX_P6 6 ASN A 166 ? PHE A 172 ? ASN A 184 PHE A 190 5 ? 7 HELX_P HELX_P7 7 THR A 173 ? PHE A 177 ? THR A 191 PHE A 195 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 58 A CYS 65 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf2 disulf ? ? A CYS 184 SG ? ? ? 1_555 A CYS 192 SG ? ? A CYS 202 A CYS 210 1_555 ? ? ? ? ? ? ? 2.046 ? ? covale1 covale one ? A ASN 86 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 104 B NAG 1 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale2 covale one ? A ASN 132 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 150 A NAG 1004 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale3 covale one ? A ASN 166 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 184 A NAG 1005 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.433 ? ? covale5 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 4 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale6 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.449 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 22 ? VAL A 23 ? LEU A 40 VAL A 41 A 2 SER A 64 ? GLY A 65 ? SER A 82 GLY A 83 B 1 VAL A 45 ? CYS A 47 ? VAL A 63 CYS A 65 B 2 VAL A 53 ? ASP A 57 ? VAL A 71 ASP A 75 B 3 TYR A 79 ? GLU A 81 ? TYR A 97 GLU A 99 B 4 SER A 103 ? ASP A 105 ? SER A 121 ASP A 123 B 5 PHE A 127 ? ARG A 129 ? PHE A 145 ARG A 147 B 6 VAL A 151 ? ASP A 153 ? VAL A 169 ASP A 171 C 1 THR A 88 ? GLY A 89 ? THR A 106 GLY A 107 C 2 SER A 110 ? GLY A 113 ? SER A 128 GLY A 131 C 3 SER A 134 ? GLY A 137 ? SER A 152 GLY A 155 C 4 ARG A 158 ? SER A 162 ? ARG A 176 SER A 180 C 5 ASP A 182 ? CYS A 184 ? ASP A 200 CYS A 202 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 23 ? N VAL A 41 O SER A 64 ? O SER A 82 B 1 2 N THR A 46 ? N THR A 64 O ILE A 54 ? O ILE A 72 B 2 3 N VAL A 56 ? N VAL A 74 O GLU A 81 ? O GLU A 99 B 3 4 N LEU A 80 ? N LEU A 98 O ASP A 105 ? O ASP A 123 B 4 5 N LEU A 104 ? N LEU A 122 O PHE A 127 ? O PHE A 145 B 5 6 N LEU A 128 ? N LEU A 146 O VAL A 151 ? O VAL A 169 C 1 2 N GLY A 89 ? N GLY A 107 O SER A 112 ? O SER A 130 C 2 3 N PHE A 111 ? N PHE A 129 O SER A 134 ? O SER A 152 C 3 4 N LEU A 135 ? N LEU A 153 O ARG A 158 ? O ARG A 176 C 4 5 N LEU A 159 ? N LEU A 177 O ASP A 182 ? O ASP A 200 # _database_PDB_matrix.entry_id 4LSC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4LSC _atom_sites.fract_transf_matrix[1][1] 0.013768 _atom_sites.fract_transf_matrix[1][2] 0.007949 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015898 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012350 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 19 ? ? ? A . n A 1 2 GLY 2 20 ? ? ? A . n A 1 3 SER 3 21 ? ? ? A . n A 1 4 SER 4 22 ? ? ? A . n A 1 5 MET 5 23 ? ? ? A . n A 1 6 ALA 6 24 ? ? ? A . n A 1 7 SER 7 25 ? ? ? A . n A 1 8 ALA 8 26 ? ? ? A . n A 1 9 ASN 9 27 27 ASN ASN A . n A 1 10 LEU 10 28 28 LEU LEU A . n A 1 11 GLU 11 29 29 GLU GLU A . n A 1 12 GLY 12 30 30 GLY GLY A . n A 1 13 ASP 13 31 31 ASP ASP A . n A 1 14 ALA 14 32 32 ALA ALA A . n A 1 15 LEU 15 33 33 LEU LEU A . n A 1 16 HIS 16 34 34 HIS HIS A . n A 1 17 THR 17 35 35 THR THR A . n A 1 18 LEU 18 36 36 LEU LEU A . n A 1 19 ARG 19 37 37 ARG ARG A . n A 1 20 VAL 20 38 38 VAL VAL A . n A 1 21 THR 21 39 39 THR THR A . n A 1 22 LEU 22 40 40 LEU LEU A . n A 1 23 VAL 23 41 41 VAL VAL A . n A 1 24 ASP 24 42 42 ASP ASP A . n A 1 25 PRO 25 43 43 PRO PRO A . n A 1 26 ASN 26 44 44 ASN ASN A . n A 1 27 ASN 27 45 45 ASN ASN A . n A 1 28 VAL 28 46 46 VAL VAL A . n A 1 29 LEU 29 47 47 LEU LEU A . n A 1 30 GLN 30 48 48 GLN GLN A . n A 1 31 SER 31 49 49 SER SER A . n A 1 32 TRP 32 50 50 TRP TRP A . n A 1 33 ASP 33 51 51 ASP ASP A . n A 1 34 PRO 34 52 52 PRO PRO A . n A 1 35 THR 35 53 53 THR THR A . n A 1 36 LEU 36 54 54 LEU LEU A . n A 1 37 VAL 37 55 55 VAL VAL A . n A 1 38 ASN 38 56 56 ASN ASN A . n A 1 39 PRO 39 57 57 PRO PRO A . n A 1 40 CYS 40 58 58 CYS CYS A . n A 1 41 THR 41 59 59 THR THR A . n A 1 42 TRP 42 60 60 TRP TRP A . n A 1 43 PHE 43 61 61 PHE PHE A . n A 1 44 HIS 44 62 62 HIS HIS A . n A 1 45 VAL 45 63 63 VAL VAL A . n A 1 46 THR 46 64 64 THR THR A . n A 1 47 CYS 47 65 65 CYS CYS A . n A 1 48 ASN 48 66 66 ASN ASN A . n A 1 49 ASN 49 67 67 ASN ASN A . n A 1 50 GLU 50 68 68 GLU GLU A . n A 1 51 ASN 51 69 69 ASN ASN A . n A 1 52 SER 52 70 70 SER SER A . n A 1 53 VAL 53 71 71 VAL VAL A . n A 1 54 ILE 54 72 72 ILE ILE A . n A 1 55 ARG 55 73 73 ARG ARG A . n A 1 56 VAL 56 74 74 VAL VAL A . n A 1 57 ASP 57 75 75 ASP ASP A . n A 1 58 LEU 58 76 76 LEU LEU A . n A 1 59 GLY 59 77 77 GLY GLY A . n A 1 60 ASN 60 78 78 ASN ASN A . n A 1 61 ALA 61 79 79 ALA ALA A . n A 1 62 GLU 62 80 80 GLU GLU A . n A 1 63 LEU 63 81 81 LEU LEU A . n A 1 64 SER 64 82 82 SER SER A . n A 1 65 GLY 65 83 83 GLY GLY A . n A 1 66 HIS 66 84 84 HIS HIS A . n A 1 67 LEU 67 85 85 LEU LEU A . n A 1 68 VAL 68 86 86 VAL VAL A . n A 1 69 PRO 69 87 87 PRO PRO A . n A 1 70 GLU 70 88 88 GLU GLU A . n A 1 71 LEU 71 89 89 LEU LEU A . n A 1 72 GLY 72 90 90 GLY GLY A . n A 1 73 VAL 73 91 91 VAL VAL A . n A 1 74 LEU 74 92 92 LEU LEU A . n A 1 75 LYS 75 93 93 LYS LYS A . n A 1 76 ASN 76 94 94 ASN ASN A . n A 1 77 LEU 77 95 95 LEU LEU A . n A 1 78 GLN 78 96 96 GLN GLN A . n A 1 79 TYR 79 97 97 TYR TYR A . n A 1 80 LEU 80 98 98 LEU LEU A . n A 1 81 GLU 81 99 99 GLU GLU A . n A 1 82 LEU 82 100 100 LEU LEU A . n A 1 83 TYR 83 101 101 TYR TYR A . n A 1 84 SER 84 102 102 SER SER A . n A 1 85 ASN 85 103 103 ASN ASN A . n A 1 86 ASN 86 104 104 ASN ASN A . n A 1 87 ILE 87 105 105 ILE ILE A . n A 1 88 THR 88 106 106 THR THR A . n A 1 89 GLY 89 107 107 GLY GLY A . n A 1 90 PRO 90 108 108 PRO PRO A . n A 1 91 ILE 91 109 109 ILE ILE A . n A 1 92 PRO 92 110 110 PRO PRO A . n A 1 93 SER 93 111 111 SER SER A . n A 1 94 ASN 94 112 112 ASN ASN A . n A 1 95 LEU 95 113 113 LEU LEU A . n A 1 96 GLY 96 114 114 GLY GLY A . n A 1 97 ASP 97 115 115 ASP ASP A . n A 1 98 LEU 98 116 116 LEU LEU A . n A 1 99 THR 99 117 117 THR THR A . n A 1 100 ASN 100 118 118 ASN ASN A . n A 1 101 LEU 101 119 119 LEU LEU A . n A 1 102 VAL 102 120 120 VAL VAL A . n A 1 103 SER 103 121 121 SER SER A . n A 1 104 LEU 104 122 122 LEU LEU A . n A 1 105 ASP 105 123 123 ASP ASP A . n A 1 106 LEU 106 124 124 LEU LEU A . n A 1 107 TYR 107 125 125 TYR TYR A . n A 1 108 LEU 108 126 126 LEU LEU A . n A 1 109 ASN 109 127 127 ASN ASN A . n A 1 110 SER 110 128 128 SER SER A . n A 1 111 PHE 111 129 129 PHE PHE A . n A 1 112 SER 112 130 130 SER SER A . n A 1 113 GLY 113 131 131 GLY GLY A . n A 1 114 PRO 114 132 132 PRO PRO A . n A 1 115 ILE 115 133 133 ILE ILE A . n A 1 116 PRO 116 134 134 PRO PRO A . n A 1 117 GLU 117 135 135 GLU GLU A . n A 1 118 SER 118 136 136 SER SER A . n A 1 119 LEU 119 137 137 LEU LEU A . n A 1 120 GLY 120 138 138 GLY GLY A . n A 1 121 LYS 121 139 139 LYS LYS A . n A 1 122 LEU 122 140 140 LEU LEU A . n A 1 123 SER 123 141 141 SER SER A . n A 1 124 LYS 124 142 142 LYS LYS A . n A 1 125 LEU 125 143 143 LEU LEU A . n A 1 126 ARG 126 144 144 ARG ARG A . n A 1 127 PHE 127 145 145 PHE PHE A . n A 1 128 LEU 128 146 146 LEU LEU A . n A 1 129 ARG 129 147 147 ARG ARG A . n A 1 130 LEU 130 148 148 LEU LEU A . n A 1 131 ASN 131 149 149 ASN ASN A . n A 1 132 ASN 132 150 150 ASN ASN A . n A 1 133 ASN 133 151 151 ASN ASN A . n A 1 134 SER 134 152 152 SER SER A . n A 1 135 LEU 135 153 153 LEU LEU A . n A 1 136 THR 136 154 154 THR THR A . n A 1 137 GLY 137 155 155 GLY GLY A . n A 1 138 SER 138 156 156 SER SER A . n A 1 139 ILE 139 157 157 ILE ILE A . n A 1 140 PRO 140 158 158 PRO PRO A . n A 1 141 MET 141 159 159 MET MET A . n A 1 142 SER 142 160 160 SER SER A . n A 1 143 LEU 143 161 161 LEU LEU A . n A 1 144 THR 144 162 162 THR THR A . n A 1 145 GLN 145 163 163 GLN GLN A . n A 1 146 ILE 146 164 164 ILE ILE A . n A 1 147 THR 147 165 165 THR THR A . n A 1 148 THR 148 166 166 THR THR A . n A 1 149 LEU 149 167 167 LEU LEU A . n A 1 150 GLN 150 168 168 GLN GLN A . n A 1 151 VAL 151 169 169 VAL VAL A . n A 1 152 LEU 152 170 170 LEU LEU A . n A 1 153 ASP 153 171 171 ASP ASP A . n A 1 154 LEU 154 172 172 LEU LEU A . n A 1 155 SER 155 173 173 SER SER A . n A 1 156 ASN 156 174 174 ASN ASN A . n A 1 157 ASN 157 175 175 ASN ASN A . n A 1 158 ARG 158 176 176 ARG ARG A . n A 1 159 LEU 159 177 177 LEU LEU A . n A 1 160 SER 160 178 178 SER SER A . n A 1 161 GLY 161 179 179 GLY GLY A . n A 1 162 SER 162 180 180 SER SER A . n A 1 163 VAL 163 181 181 VAL VAL A . n A 1 164 PRO 164 182 182 PRO PRO A . n A 1 165 ASP 165 183 183 ASP ASP A . n A 1 166 ASN 166 184 184 ASN ASN A . n A 1 167 GLY 167 185 185 GLY GLY A . n A 1 168 SER 168 186 186 SER SER A . n A 1 169 PHE 169 187 187 PHE PHE A . n A 1 170 SER 170 188 188 SER SER A . n A 1 171 LEU 171 189 189 LEU LEU A . n A 1 172 PHE 172 190 190 PHE PHE A . n A 1 173 THR 173 191 191 THR THR A . n A 1 174 PRO 174 192 192 PRO PRO A . n A 1 175 ILE 175 193 193 ILE ILE A . n A 1 176 SER 176 194 194 SER SER A . n A 1 177 PHE 177 195 195 PHE PHE A . n A 1 178 ALA 178 196 196 ALA ALA A . n A 1 179 ASN 179 197 197 ASN ASN A . n A 1 180 ASN 180 198 198 ASN ASN A . n A 1 181 LEU 181 199 199 LEU LEU A . n A 1 182 ASP 182 200 200 ASP ASP A . n A 1 183 LEU 183 201 201 LEU LEU A . n A 1 184 CYS 184 202 202 CYS CYS A . n A 1 185 GLY 185 203 203 GLY GLY A . n A 1 186 PRO 186 204 204 PRO PRO A . n A 1 187 VAL 187 205 205 VAL VAL A . n A 1 188 THR 188 206 206 THR THR A . n A 1 189 SER 189 207 207 SER SER A . n A 1 190 HIS 190 208 208 HIS HIS A . n A 1 191 PRO 191 209 209 PRO PRO A . n A 1 192 CYS 192 210 210 CYS CYS A . n A 1 193 PRO 193 211 211 PRO PRO A . n A 1 194 GLY 194 212 212 GLY GLY A . n A 1 195 SER 195 213 ? ? ? A . n A 1 196 LEU 196 214 ? ? ? A . n A 1 197 GLU 197 215 ? ? ? A . n A 1 198 ASN 198 216 ? ? ? A . n A 1 199 LEU 199 217 ? ? ? A . n A 1 200 TYR 200 218 ? ? ? A . n A 1 201 PHE 201 219 ? ? ? A . n A 1 202 GLN 202 220 ? ? ? A . n A 1 203 GLY 203 221 ? ? ? A . n A 1 204 ALA 204 222 ? ? ? A . n A 1 205 TRP 205 223 ? ? ? A . n A 1 206 SER 206 224 ? ? ? A . n A 1 207 HIS 207 225 ? ? ? A . n A 1 208 PRO 208 226 ? ? ? A . n A 1 209 GLN 209 227 ? ? ? A . n A 1 210 PHE 210 228 ? ? ? A . n A 1 211 GLU 211 229 ? ? ? A . n A 1 212 LYS 212 230 ? ? ? A . n A 1 213 GLY 213 231 ? ? ? A . n A 1 214 SER 214 232 ? ? ? A . n A 1 215 HIS 215 233 ? ? ? A . n A 1 216 HIS 216 234 ? ? ? A . n A 1 217 HIS 217 235 ? ? ? A . n A 1 218 HIS 218 236 ? ? ? A . n A 1 219 HIS 219 237 ? ? ? A . n A 1 220 HIS 220 238 ? ? ? A . n A 1 221 HIS 221 239 ? ? ? A . n A 1 222 HIS 222 240 ? ? ? A . n A 1 223 HIS 223 241 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 1004 1004 NAG NAG A . D 3 NAG 1 1005 1005 NAG NAG A . E 4 HOH 1 1101 1101 HOH HOH A . E 4 HOH 2 1102 1102 HOH HOH A . E 4 HOH 3 1103 1103 HOH HOH A . E 4 HOH 4 1104 1104 HOH HOH A . E 4 HOH 5 1105 1105 HOH HOH A . E 4 HOH 6 1106 1106 HOH HOH A . E 4 HOH 7 1107 1107 HOH HOH A . E 4 HOH 8 1108 1108 HOH HOH A . E 4 HOH 9 1109 1109 HOH HOH A . E 4 HOH 10 1110 1110 HOH HOH A . E 4 HOH 11 1111 1111 HOH HOH A . E 4 HOH 12 1112 1112 HOH HOH A . E 4 HOH 13 1113 1113 HOH HOH A . E 4 HOH 14 1114 1114 HOH HOH A . E 4 HOH 15 1115 1115 HOH HOH A . E 4 HOH 16 1116 1116 HOH HOH A . E 4 HOH 17 1117 1117 HOH HOH A . E 4 HOH 18 1118 1118 HOH HOH A . E 4 HOH 19 1119 1119 HOH HOH A . E 4 HOH 20 1120 1120 HOH HOH A . E 4 HOH 21 1121 1121 HOH HOH A . E 4 HOH 22 1122 1122 HOH HOH A . E 4 HOH 23 1123 1123 HOH HOH A . E 4 HOH 24 1124 1124 HOH HOH A . E 4 HOH 25 1125 1125 HOH HOH A . E 4 HOH 26 1126 1126 HOH HOH A . E 4 HOH 27 1127 1127 HOH HOH A . E 4 HOH 28 1128 1128 HOH HOH A . E 4 HOH 29 1129 1129 HOH HOH A . E 4 HOH 30 1130 1130 HOH HOH A . E 4 HOH 31 1131 1131 HOH HOH A . E 4 HOH 32 1132 1132 HOH HOH A . E 4 HOH 33 1133 1133 HOH HOH A . E 4 HOH 34 1134 1134 HOH HOH A . E 4 HOH 35 1135 1135 HOH HOH A . E 4 HOH 36 1136 1136 HOH HOH A . E 4 HOH 37 1137 1137 HOH HOH A . E 4 HOH 38 1138 1138 HOH HOH A . E 4 HOH 39 1139 1139 HOH HOH A . E 4 HOH 40 1140 1140 HOH HOH A . E 4 HOH 41 1141 1141 HOH HOH A . E 4 HOH 42 1142 1142 HOH HOH A . E 4 HOH 43 1143 1143 HOH HOH A . E 4 HOH 44 1144 1144 HOH HOH A . E 4 HOH 45 1145 1145 HOH HOH A . E 4 HOH 46 1146 1146 HOH HOH A . E 4 HOH 47 1147 1147 HOH HOH A . E 4 HOH 48 1148 1148 HOH HOH A . E 4 HOH 49 1149 1149 HOH HOH A . E 4 HOH 50 1150 1150 HOH HOH A . E 4 HOH 51 1151 1151 HOH HOH A . E 4 HOH 52 1152 1152 HOH HOH A . E 4 HOH 53 1153 1153 HOH HOH A . E 4 HOH 54 1154 1154 HOH HOH A . E 4 HOH 55 1155 1155 HOH HOH A . E 4 HOH 56 1156 1156 HOH HOH A . E 4 HOH 57 1157 1157 HOH HOH A . E 4 HOH 58 1158 1158 HOH HOH A . E 4 HOH 59 1159 1159 HOH HOH A . E 4 HOH 60 1160 1160 HOH HOH A . E 4 HOH 61 1161 1161 HOH HOH A . E 4 HOH 62 1162 1162 HOH HOH A . E 4 HOH 63 1163 1163 HOH HOH A . E 4 HOH 64 1164 1164 HOH HOH A . E 4 HOH 65 1165 1165 HOH HOH A . E 4 HOH 66 1166 1166 HOH HOH A . E 4 HOH 67 1167 1167 HOH HOH A . E 4 HOH 68 1168 1168 HOH HOH A . E 4 HOH 69 1169 1169 HOH HOH A . E 4 HOH 70 1170 1170 HOH HOH A . E 4 HOH 71 1171 1171 HOH HOH A . E 4 HOH 72 1172 1172 HOH HOH A . E 4 HOH 73 1173 1173 HOH HOH A . E 4 HOH 74 1174 1174 HOH HOH A . E 4 HOH 75 1175 1175 HOH HOH A . E 4 HOH 76 1176 1176 HOH HOH A . E 4 HOH 77 1177 1177 HOH HOH A . E 4 HOH 78 1178 1178 HOH HOH A . E 4 HOH 79 1179 1179 HOH HOH A . E 4 HOH 80 1180 1180 HOH HOH A . E 4 HOH 81 1181 1181 HOH HOH A . E 4 HOH 82 1182 1182 HOH HOH A . E 4 HOH 83 1183 1183 HOH HOH A . E 4 HOH 84 1184 1184 HOH HOH A . E 4 HOH 85 1185 1185 HOH HOH A . E 4 HOH 86 1186 1186 HOH HOH A . E 4 HOH 87 1187 1187 HOH HOH A . E 4 HOH 88 1188 1188 HOH HOH A . E 4 HOH 89 1189 1189 HOH HOH A . E 4 HOH 90 1190 1190 HOH HOH A . E 4 HOH 91 1191 1191 HOH HOH A . E 4 HOH 92 1192 1192 HOH HOH A . E 4 HOH 93 1193 1193 HOH HOH A . E 4 HOH 94 1194 1194 HOH HOH A . E 4 HOH 95 1195 1195 HOH HOH A . E 4 HOH 96 1196 1196 HOH HOH A . E 4 HOH 97 1197 1197 HOH HOH A . E 4 HOH 98 1198 1198 HOH HOH A . E 4 HOH 99 1199 1199 HOH HOH A . E 4 HOH 100 1200 1200 HOH HOH A . E 4 HOH 101 1201 1201 HOH HOH A . E 4 HOH 102 1202 1202 HOH HOH A . E 4 HOH 103 1203 1203 HOH HOH A . E 4 HOH 104 1204 1204 HOH HOH A . E 4 HOH 105 1205 1205 HOH HOH A . E 4 HOH 106 1206 1206 HOH HOH A . E 4 HOH 107 1207 1207 HOH HOH A . E 4 HOH 108 1208 1208 HOH HOH A . E 4 HOH 109 1209 1209 HOH HOH A . E 4 HOH 110 1210 1210 HOH HOH A . E 4 HOH 111 1211 1211 HOH HOH A . E 4 HOH 112 1212 1212 HOH HOH A . E 4 HOH 113 1213 1213 HOH HOH A . E 4 HOH 114 1214 1214 HOH HOH A . E 4 HOH 115 1215 1215 HOH HOH A . E 4 HOH 116 1216 1216 HOH HOH A . E 4 HOH 117 1217 1217 HOH HOH A . E 4 HOH 118 1218 1218 HOH HOH A . E 4 HOH 119 1219 1219 HOH HOH A . E 4 HOH 120 1220 1220 HOH HOH A . E 4 HOH 121 1221 1221 HOH HOH A . E 4 HOH 122 1222 1222 HOH HOH A . E 4 HOH 123 1223 1223 HOH HOH A . E 4 HOH 124 1224 1224 HOH HOH A . E 4 HOH 125 1225 1225 HOH HOH A . E 4 HOH 126 1226 1226 HOH HOH A . E 4 HOH 127 1227 1227 HOH HOH A . E 4 HOH 128 1228 1228 HOH HOH A . E 4 HOH 129 1229 1229 HOH HOH A . E 4 HOH 130 1230 1230 HOH HOH A . E 4 HOH 131 1231 1231 HOH HOH A . E 4 HOH 132 1232 1232 HOH HOH A . E 4 HOH 133 1233 1233 HOH HOH A . E 4 HOH 134 1234 1234 HOH HOH A . E 4 HOH 135 1235 1235 HOH HOH A . E 4 HOH 136 1236 1236 HOH HOH A . E 4 HOH 137 1237 1237 HOH HOH A . E 4 HOH 138 1238 1238 HOH HOH A . E 4 HOH 139 1239 1239 HOH HOH A . E 4 HOH 140 1240 1240 HOH HOH A . E 4 HOH 141 1241 1241 HOH HOH A . E 4 HOH 142 1242 1242 HOH HOH A . E 4 HOH 143 1243 1243 HOH HOH A . E 4 HOH 144 1244 1244 HOH HOH A . E 4 HOH 145 1245 1245 HOH HOH A . E 4 HOH 146 1246 1246 HOH HOH A . E 4 HOH 147 1247 1247 HOH HOH A . E 4 HOH 148 1248 1248 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 166 A ASN 184 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 86 A ASN 104 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 132 A ASN 150 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-04 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Refinement description' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_ref_seq_dif 17 3 'Structure model' struct_site 18 3 'Structure model' struct_site_gen 19 4 'Structure model' chem_comp 20 4 'Structure model' chem_comp_atom 21 4 'Structure model' chem_comp_bond 22 4 'Structure model' database_2 23 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_chem_comp.name' 6 3 'Structure model' '_chem_comp.type' 7 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 8 3 'Structure model' '_struct_conn.pdbx_dist_value' 9 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 3 'Structure model' '_struct_conn.pdbx_role' 11 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 3 'Structure model' '_struct_ref_seq_dif.details' 24 4 'Structure model' '_chem_comp.pdbx_synonyms' 25 4 'Structure model' '_database_2.pdbx_DOI' 26 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 51.2405 7.1770 10.9920 0.2932 0.2721 0.1670 -0.0391 -0.0003 -0.0212 2.7138 3.5699 1.6362 1.1111 -0.8238 -0.2839 -0.1959 0.5008 -0.1223 -0.5575 0.2095 -0.0081 0.3184 -0.0328 -0.0206 'X-RAY DIFFRACTION' 2 ? refined 44.5592 -5.8134 13.6976 0.6143 0.2506 0.3862 -0.0720 0.0298 -0.1210 3.2713 1.2526 2.3257 -0.5739 1.2793 1.2265 0.0179 0.6408 -1.3299 -0.5678 -0.1270 0.2397 1.0679 -0.2995 0.0141 'X-RAY DIFFRACTION' 3 ? refined 44.7837 8.7632 28.2971 0.1246 0.1094 0.1356 -0.0012 0.0035 0.0074 1.4295 2.1928 2.5887 0.0486 0.0539 0.4918 -0.0502 0.0089 -0.0571 -0.0195 -0.0040 0.1430 0.2088 -0.0923 0.0531 'X-RAY DIFFRACTION' 4 ? refined 42.4295 11.6284 44.2822 0.2898 0.1984 0.1436 0.0002 0.0679 -0.0173 5.6201 5.5600 3.4183 0.9122 1.1374 0.7973 0.0939 -0.3937 -0.0121 0.6205 -0.1291 0.3059 0.5018 -0.0966 0.0267 'X-RAY DIFFRACTION' 5 ? refined 39.5970 15.5041 51.7768 0.6773 0.3808 0.3942 0.0446 0.1594 0.0418 5.2261 2.2603 2.5626 0.2956 1.9693 1.9279 0.0186 -0.4509 -0.1362 1.1022 -0.4254 0.0462 0.2921 0.3999 0.3978 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resseq 27:66)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resseq 67:72)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resseq 73:175)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resseq 176:201)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain A and resseq 202:212)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 PHENIX refinement '(phenix.refine: dev_1334)' ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 HD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HIS _pdbx_validate_close_contact.auth_seq_id_1 62 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1212 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.51 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 82 ? ? -137.71 -153.22 2 1 ASP A 200 ? ? -163.06 60.92 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 27 ? CG ? A ASN 9 CG 2 1 Y 1 A ASN 27 ? OD1 ? A ASN 9 OD1 3 1 Y 1 A ASN 27 ? ND2 ? A ASN 9 ND2 4 1 Y 1 A GLN 48 ? CG ? A GLN 30 CG 5 1 Y 1 A GLN 48 ? CD ? A GLN 30 CD 6 1 Y 1 A GLN 48 ? OE1 ? A GLN 30 OE1 7 1 Y 1 A GLN 48 ? NE2 ? A GLN 30 NE2 8 1 Y 1 A ASP 51 ? CG ? A ASP 33 CG 9 1 Y 1 A ASP 51 ? OD1 ? A ASP 33 OD1 10 1 Y 1 A ASP 51 ? OD2 ? A ASP 33 OD2 11 1 Y 1 A VAL 55 ? CG1 ? A VAL 37 CG1 12 1 Y 1 A VAL 55 ? CG2 ? A VAL 37 CG2 13 1 Y 1 A PHE 61 ? CG ? A PHE 43 CG 14 1 Y 1 A PHE 61 ? CD1 ? A PHE 43 CD1 15 1 Y 1 A PHE 61 ? CD2 ? A PHE 43 CD2 16 1 Y 1 A PHE 61 ? CE1 ? A PHE 43 CE1 17 1 Y 1 A PHE 61 ? CE2 ? A PHE 43 CE2 18 1 Y 1 A PHE 61 ? CZ ? A PHE 43 CZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 19 ? A ALA 1 2 1 Y 1 A GLY 20 ? A GLY 2 3 1 Y 1 A SER 21 ? A SER 3 4 1 Y 1 A SER 22 ? A SER 4 5 1 Y 1 A MET 23 ? A MET 5 6 1 Y 1 A ALA 24 ? A ALA 6 7 1 Y 1 A SER 25 ? A SER 7 8 1 Y 1 A ALA 26 ? A ALA 8 9 1 Y 1 A SER 213 ? A SER 195 10 1 Y 1 A LEU 214 ? A LEU 196 11 1 Y 1 A GLU 215 ? A GLU 197 12 1 Y 1 A ASN 216 ? A ASN 198 13 1 Y 1 A LEU 217 ? A LEU 199 14 1 Y 1 A TYR 218 ? A TYR 200 15 1 Y 1 A PHE 219 ? A PHE 201 16 1 Y 1 A GLN 220 ? A GLN 202 17 1 Y 1 A GLY 221 ? A GLY 203 18 1 Y 1 A ALA 222 ? A ALA 204 19 1 Y 1 A TRP 223 ? A TRP 205 20 1 Y 1 A SER 224 ? A SER 206 21 1 Y 1 A HIS 225 ? A HIS 207 22 1 Y 1 A PRO 226 ? A PRO 208 23 1 Y 1 A GLN 227 ? A GLN 209 24 1 Y 1 A PHE 228 ? A PHE 210 25 1 Y 1 A GLU 229 ? A GLU 211 26 1 Y 1 A LYS 230 ? A LYS 212 27 1 Y 1 A GLY 231 ? A GLY 213 28 1 Y 1 A SER 232 ? A SER 214 29 1 Y 1 A HIS 233 ? A HIS 215 30 1 Y 1 A HIS 234 ? A HIS 216 31 1 Y 1 A HIS 235 ? A HIS 217 32 1 Y 1 A HIS 236 ? A HIS 218 33 1 Y 1 A HIS 237 ? A HIS 219 34 1 Y 1 A HIS 238 ? A HIS 220 35 1 Y 1 A HIS 239 ? A HIS 221 36 1 Y 1 A HIS 240 ? A HIS 222 37 1 Y 1 A HIS 241 ? A HIS 223 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 NAG C1 C N R 297 NAG C2 C N R 298 NAG C3 C N R 299 NAG C4 C N S 300 NAG C5 C N R 301 NAG C6 C N N 302 NAG C7 C N N 303 NAG C8 C N N 304 NAG N2 N N N 305 NAG O1 O N N 306 NAG O3 O N N 307 NAG O4 O N N 308 NAG O5 O N N 309 NAG O6 O N N 310 NAG O7 O N N 311 NAG H1 H N N 312 NAG H2 H N N 313 NAG H3 H N N 314 NAG H4 H N N 315 NAG H5 H N N 316 NAG H61 H N N 317 NAG H62 H N N 318 NAG H81 H N N 319 NAG H82 H N N 320 NAG H83 H N N 321 NAG HN2 H N N 322 NAG HO1 H N N 323 NAG HO3 H N N 324 NAG HO4 H N N 325 NAG HO6 H N N 326 PHE N N N N 327 PHE CA C N S 328 PHE C C N N 329 PHE O O N N 330 PHE CB C N N 331 PHE CG C Y N 332 PHE CD1 C Y N 333 PHE CD2 C Y N 334 PHE CE1 C Y N 335 PHE CE2 C Y N 336 PHE CZ C Y N 337 PHE OXT O N N 338 PHE H H N N 339 PHE H2 H N N 340 PHE HA H N N 341 PHE HB2 H N N 342 PHE HB3 H N N 343 PHE HD1 H N N 344 PHE HD2 H N N 345 PHE HE1 H N N 346 PHE HE2 H N N 347 PHE HZ H N N 348 PHE HXT H N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 NAG C1 C2 sing N N 284 NAG C1 O1 sing N N 285 NAG C1 O5 sing N N 286 NAG C1 H1 sing N N 287 NAG C2 C3 sing N N 288 NAG C2 N2 sing N N 289 NAG C2 H2 sing N N 290 NAG C3 C4 sing N N 291 NAG C3 O3 sing N N 292 NAG C3 H3 sing N N 293 NAG C4 C5 sing N N 294 NAG C4 O4 sing N N 295 NAG C4 H4 sing N N 296 NAG C5 C6 sing N N 297 NAG C5 O5 sing N N 298 NAG C5 H5 sing N N 299 NAG C6 O6 sing N N 300 NAG C6 H61 sing N N 301 NAG C6 H62 sing N N 302 NAG C7 C8 sing N N 303 NAG C7 N2 sing N N 304 NAG C7 O7 doub N N 305 NAG C8 H81 sing N N 306 NAG C8 H82 sing N N 307 NAG C8 H83 sing N N 308 NAG N2 HN2 sing N N 309 NAG O1 HO1 sing N N 310 NAG O3 HO3 sing N N 311 NAG O4 HO4 sing N N 312 NAG O6 HO6 sing N N 313 PHE N CA sing N N 314 PHE N H sing N N 315 PHE N H2 sing N N 316 PHE CA C sing N N 317 PHE CA CB sing N N 318 PHE CA HA sing N N 319 PHE C O doub N N 320 PHE C OXT sing N N 321 PHE CB CG sing N N 322 PHE CB HB2 sing N N 323 PHE CB HB3 sing N N 324 PHE CG CD1 doub Y N 325 PHE CG CD2 sing Y N 326 PHE CD1 CE1 sing Y N 327 PHE CD1 HD1 sing N N 328 PHE CD2 CE2 doub Y N 329 PHE CD2 HD2 sing N N 330 PHE CE1 CZ doub Y N 331 PHE CE1 HE1 sing N N 332 PHE CE2 CZ sing Y N 333 PHE CE2 HE2 sing N N 334 PHE CZ HZ sing N N 335 PHE OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1000 n B 2 NAG 2 B NAG 2 A NAG 1001 n B 2 BMA 3 B BMA 3 A BMA 1002 n B 2 FUC 4 B FUC 4 A FUC 1003 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 FUC 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OGQ _pdbx_initial_refinement_model.details 'PDB ENTRY 1OGQ' #