data_4MJG # _entry.id 4MJG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4MJG pdb_00004mjg 10.2210/pdb4mjg/pdb RCSB RCSB081986 ? ? WWPDB D_1000081986 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-418621 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4MJG _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-09-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (ACTODO_00621) from Actinomyces odontolyticus ATCC 17982 at 2.65 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4MJG _cell.length_a 97.080 _cell.length_b 97.080 _cell.length_c 105.044 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MJG _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein' 21526.455 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAKSRDAEFVPFPERVSIEEYISRQLPEISSVAVPVAAETGGELTV(MSE)GLPYVQVCGTGDTQGYRVVGYTTVAPS (MSE)SFERLEKLVTENKPDWAVAVQVDKQIDRDATRGIQLIDNYGGLVEFKFSEDSIAVRSRSACLPTNKPLDDPGQFV LPSVEEAFPG(MSE)HVTISDNTNPDLHPVPTLTTGAHVTPQSGTQSGTQSGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GAKSRDAEFVPFPERVSIEEYISRQLPEISSVAVPVAAETGGELTVMGLPYVQVCGTGDTQGYRVVGYTTVAPSMSFERL EKLVTENKPDWAVAVQVDKQIDRDATRGIQLIDNYGGLVEFKFSEDSIAVRSRSACLPTNKPLDDPGQFVLPSVEEAFPG MHVTISDNTNPDLHPVPTLTTGAHVTPQSGTQSGTQSGS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier JCSG-418621 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 LYS n 1 4 SER n 1 5 ARG n 1 6 ASP n 1 7 ALA n 1 8 GLU n 1 9 PHE n 1 10 VAL n 1 11 PRO n 1 12 PHE n 1 13 PRO n 1 14 GLU n 1 15 ARG n 1 16 VAL n 1 17 SER n 1 18 ILE n 1 19 GLU n 1 20 GLU n 1 21 TYR n 1 22 ILE n 1 23 SER n 1 24 ARG n 1 25 GLN n 1 26 LEU n 1 27 PRO n 1 28 GLU n 1 29 ILE n 1 30 SER n 1 31 SER n 1 32 VAL n 1 33 ALA n 1 34 VAL n 1 35 PRO n 1 36 VAL n 1 37 ALA n 1 38 ALA n 1 39 GLU n 1 40 THR n 1 41 GLY n 1 42 GLY n 1 43 GLU n 1 44 LEU n 1 45 THR n 1 46 VAL n 1 47 MSE n 1 48 GLY n 1 49 LEU n 1 50 PRO n 1 51 TYR n 1 52 VAL n 1 53 GLN n 1 54 VAL n 1 55 CYS n 1 56 GLY n 1 57 THR n 1 58 GLY n 1 59 ASP n 1 60 THR n 1 61 GLN n 1 62 GLY n 1 63 TYR n 1 64 ARG n 1 65 VAL n 1 66 VAL n 1 67 GLY n 1 68 TYR n 1 69 THR n 1 70 THR n 1 71 VAL n 1 72 ALA n 1 73 PRO n 1 74 SER n 1 75 MSE n 1 76 SER n 1 77 PHE n 1 78 GLU n 1 79 ARG n 1 80 LEU n 1 81 GLU n 1 82 LYS n 1 83 LEU n 1 84 VAL n 1 85 THR n 1 86 GLU n 1 87 ASN n 1 88 LYS n 1 89 PRO n 1 90 ASP n 1 91 TRP n 1 92 ALA n 1 93 VAL n 1 94 ALA n 1 95 VAL n 1 96 GLN n 1 97 VAL n 1 98 ASP n 1 99 LYS n 1 100 GLN n 1 101 ILE n 1 102 ASP n 1 103 ARG n 1 104 ASP n 1 105 ALA n 1 106 THR n 1 107 ARG n 1 108 GLY n 1 109 ILE n 1 110 GLN n 1 111 LEU n 1 112 ILE n 1 113 ASP n 1 114 ASN n 1 115 TYR n 1 116 GLY n 1 117 GLY n 1 118 LEU n 1 119 VAL n 1 120 GLU n 1 121 PHE n 1 122 LYS n 1 123 PHE n 1 124 SER n 1 125 GLU n 1 126 ASP n 1 127 SER n 1 128 ILE n 1 129 ALA n 1 130 VAL n 1 131 ARG n 1 132 SER n 1 133 ARG n 1 134 SER n 1 135 ALA n 1 136 CYS n 1 137 LEU n 1 138 PRO n 1 139 THR n 1 140 ASN n 1 141 LYS n 1 142 PRO n 1 143 LEU n 1 144 ASP n 1 145 ASP n 1 146 PRO n 1 147 GLY n 1 148 GLN n 1 149 PHE n 1 150 VAL n 1 151 LEU n 1 152 PRO n 1 153 SER n 1 154 VAL n 1 155 GLU n 1 156 GLU n 1 157 ALA n 1 158 PHE n 1 159 PRO n 1 160 GLY n 1 161 MSE n 1 162 HIS n 1 163 VAL n 1 164 THR n 1 165 ILE n 1 166 SER n 1 167 ASP n 1 168 ASN n 1 169 THR n 1 170 ASN n 1 171 PRO n 1 172 ASP n 1 173 LEU n 1 174 HIS n 1 175 PRO n 1 176 VAL n 1 177 PRO n 1 178 THR n 1 179 LEU n 1 180 THR n 1 181 THR n 1 182 GLY n 1 183 ALA n 1 184 HIS n 1 185 VAL n 1 186 THR n 1 187 PRO n 1 188 GLN n 1 189 SER n 1 190 GLY n 1 191 THR n 1 192 GLN n 1 193 SER n 1 194 GLY n 1 195 THR n 1 196 GLN n 1 197 SER n 1 198 GLY n 1 199 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ACTODO_00621, ZP_02043769.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 17982' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Actinomyces odontolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 411466 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7BAF7_9ACTO _struct_ref.pdbx_db_accession A7BAF7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AKSRDAEFVPFPERVSIEEYISRQLPEISSVAVPVAAETGGELTVMGLPYVQVCGTGDTQGYRVVGYTTVAPSMSFERLE KLVTENKPDWAVAVQVDKQIDRDATRGIQLIDNYGGLVEFKFSEDSIAVRSRSACLPTNKPLDDPGQFVLPSVEEAFPGM HVTISDNTNPDLHPVPTLTTGAHVTPQSGTQSGTQSGS ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4MJG A 2 ? 199 ? A7BAF7 29 ? 226 ? 29 226 2 1 4MJG B 2 ? 199 ? A7BAF7 29 ? 226 ? 29 226 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MJG GLY A 1 ? UNP A7BAF7 ? ? 'expression tag' 0 1 2 4MJG GLY B 1 ? UNP A7BAF7 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4MJG # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.32 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details '2.4M ammonium sulfate, 0.1M Bicine pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH 8.5 # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-08-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97941 1.0 3 0.97868 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97941,0.97868 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.65 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 9.200 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4MJG _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 88.900 _reflns.pdbx_Rsym_value 0.061 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 15164 _reflns.d_resolution_low 44.544 _reflns.pdbx_redundancy 3.200 _reflns.number_obs 15164 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.650 2.720 ? 3833 ? 0.811 0.9 0.811 ? 3.200 ? 1182 95.300 1 1 2.720 2.790 ? 3581 ? 0.531 1.4 0.531 ? 3.200 ? 1107 91.400 2 1 2.790 2.870 ? 3007 ? 0.425 1.7 0.425 ? 3.100 ? 966 83.500 3 1 2.870 2.960 ? 3416 ? 0.316 2.3 0.316 ? 3.200 ? 1068 93.100 4 1 2.960 3.060 ? 3547 ? 0.244 3.0 0.244 ? 3.300 ? 1090 97.100 5 1 3.060 3.170 ? 3372 ? 0.190 3.9 0.190 ? 3.300 ? 1024 96.100 6 1 3.170 3.290 ? 3092 ? 0.139 5.3 0.139 ? 3.100 ? 986 95.200 7 1 3.290 3.420 ? 2930 ? 0.106 6.7 0.106 ? 3.200 ? 923 91.200 8 1 3.420 3.570 ? 2504 ? 0.078 8.9 0.078 ? 3.200 ? 787 81.800 9 1 3.570 3.750 ? 1845 ? 0.085 8.5 0.085 ? 3.200 ? 573 61.200 10 1 3.750 3.950 ? 2062 ? 0.060 10.8 0.060 ? 3.200 ? 638 73.800 11 1 3.950 4.190 ? 2603 ? 0.049 11.9 0.049 ? 3.200 ? 802 95.400 12 1 4.190 4.480 ? 2331 ? 0.039 14.0 0.039 ? 3.300 ? 711 90.800 13 1 4.480 4.840 ? 1963 ? 0.036 15.7 0.036 ? 3.300 ? 601 81.300 14 1 4.840 5.300 ? 2221 ? 0.040 12.4 0.040 ? 3.400 ? 660 96.500 15 1 5.300 5.930 ? 1888 ? 0.040 15.3 0.040 ? 3.300 ? 579 94.400 16 1 5.930 6.840 ? 1534 ? 0.037 16.1 0.037 ? 3.200 ? 478 85.700 17 1 6.840 8.380 ? 1361 ? 0.033 16.1 0.033 ? 3.200 ? 432 90.600 18 1 8.380 11.850 ? 1091 ? 0.032 17.8 0.032 ? 3.100 ? 357 94.600 19 1 11.850 44.544 ? 570 ? 0.042 10.5 0.042 ? 2.800 ? 200 86.400 20 1 # _refine.ls_percent_reflns_R_free 5.1000 _refine.overall_SU_B 27.3950 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4MJG _refine.aniso_B[2][3] -0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.2620 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] -0.0000 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.aniso_B[3][3] -5.1100 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 1.5700 _refine.pdbx_overall_ESU_R 0.5890 _refine.ls_R_factor_obs 0.2351 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.correlation_coeff_Fo_to_Fc 0.9410 _refine.ls_number_reflns_R_free 768 _refine.correlation_coeff_Fo_to_Fc_free 0.9300 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 88.7000 _refine.ls_R_factor_R_work 0.2336 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.6500 _refine.pdbx_overall_ESU_R_Free 0.3200 _refine.B_iso_min 44.030 _refine.occupancy_min 0.500 _refine.B_iso_mean 80.9114 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] 1.5700 _refine.B_iso_max 161.840 _refine.ls_d_res_low 44.544 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.aniso_B[1][2] 1.5700 _refine.ls_R_factor_R_free 0.2609 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 15135 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. CHLORIDE (CL),SULFATE (SO4) AND GLYCEROL (GOL) MOLECULES FROM THE PURIFICATION/CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE MODELED. 7. DUE TO STRONG ICE RINGS, REFLECTIONS WERE OMITTED IN THE 3.91-3.86 AND 3.70-3.64 RESOLUTION SHELLS LOWERING THE OVERALL COMPLETENESS TO 88.7%. THE NOMINAL RESOLUTION OF THE RESULTING DATASET IS 2.80 A WITH 2358 OBSERVED REFLECTIONS BETWEEN 2.80-2.65 (92.4% COMPLETE FOR THIS SHELL) INCLUDED IN THE REFINEMENT. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2696 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2742 _refine_hist.d_res_high 2.6500 _refine_hist.d_res_low 44.544 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2788 0.005 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 2594 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3813 1.023 1.993 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 5998 0.782 3.001 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 352 6.079 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 119 33.549 24.958 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 409 14.511 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 13.451 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 445 0.059 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3135 0.003 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 568 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1414 4.491 10.800 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1413 4.487 10.795 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1764 7.081 20.221 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.6500 _refine_ls_shell.d_res_low 2.7190 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.5200 _refine_ls_shell.number_reflns_R_work 1106 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3840 _refine_ls_shell.R_factor_R_free 0.4630 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1174 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a DUF4853 family protein (ACTODO_00621) from Actinomyces odontolyticus ATCC 17982 at 2.65 A resolution' _struct.entry_id 4MJG _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;PF16145 family, DUF4853, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION, STRUCTURAL GENOMICS UNKNOWN FUNCTION ; _struct_keywords.entry_id 4MJG # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 4 ? J N N 4 ? K N N 3 ? L N N 5 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 11 ? ARG A 15 ? PRO A 38 ARG A 42 5 ? 5 HELX_P HELX_P2 2 SER A 17 ? GLN A 25 ? SER A 44 GLN A 52 1 ? 9 HELX_P HELX_P3 3 GLN A 25 ? VAL A 32 ? GLN A 52 VAL A 59 1 ? 8 HELX_P HELX_P4 4 ALA A 33 ? GLY A 41 ? ALA A 60 GLY A 68 1 ? 9 HELX_P HELX_P5 5 THR A 57 ? GLN A 61 ? THR A 84 GLN A 88 5 ? 5 HELX_P HELX_P6 6 SER A 76 ? ASN A 87 ? SER A 103 ASN A 114 1 ? 12 HELX_P HELX_P7 7 ASP A 145 ? PHE A 149 ? ASP A 172 PHE A 176 5 ? 5 HELX_P HELX_P8 8 SER A 153 ? PHE A 158 ? SER A 180 PHE A 185 1 ? 6 HELX_P HELX_P9 9 PRO B 11 ? ARG B 15 ? PRO B 38 ARG B 42 5 ? 5 HELX_P HELX_P10 10 SER B 17 ? GLN B 25 ? SER B 44 GLN B 52 1 ? 9 HELX_P HELX_P11 11 GLN B 25 ? VAL B 32 ? GLN B 52 VAL B 59 1 ? 8 HELX_P HELX_P12 12 ALA B 33 ? GLY B 41 ? ALA B 60 GLY B 68 1 ? 9 HELX_P HELX_P13 13 THR B 57 ? GLN B 61 ? THR B 84 GLN B 88 5 ? 5 HELX_P HELX_P14 14 SER B 76 ? ASN B 87 ? SER B 103 ASN B 114 1 ? 12 HELX_P HELX_P15 15 ASP B 145 ? PHE B 149 ? ASP B 172 PHE B 176 5 ? 5 HELX_P HELX_P16 16 SER B 153 ? PHE B 158 ? SER B 180 PHE B 185 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 136 SG ? ? A CYS 82 A CYS 163 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? B CYS 55 SG ? ? ? 1_555 B CYS 136 SG ? ? B CYS 82 B CYS 163 1_555 ? ? ? ? ? ? ? 2.043 ? ? covale1 covale both ? A VAL 46 C ? ? ? 1_555 A MSE 47 N ? ? A VAL 73 A MSE 74 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 47 C ? ? ? 1_555 A GLY 48 N ? ? A MSE 74 A GLY 75 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? A SER 74 C ? ? ? 1_555 A MSE 75 N ? ? A SER 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 75 C ? ? ? 1_555 A SER 76 N ? ? A MSE 102 A SER 103 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A GLY 160 C ? ? ? 1_555 A MSE 161 N ? ? A GLY 187 A MSE 188 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 161 C ? ? ? 1_555 A HIS 162 N ? ? A MSE 188 A HIS 189 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? B VAL 46 C ? ? ? 1_555 B MSE 47 N ? ? B VAL 73 B MSE 74 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? B MSE 47 C ? ? ? 1_555 B GLY 48 N ? ? B MSE 74 B GLY 75 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale9 covale both ? B SER 74 C ? ? ? 1_555 B MSE 75 N ? ? B SER 101 B MSE 102 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? B MSE 75 C ? ? ? 1_555 B SER 76 N ? ? B MSE 102 B SER 103 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? B GLY 160 C ? ? ? 1_555 B MSE 161 N ? ? B GLY 187 B MSE 188 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? B MSE 161 C ? ? ? 1_555 B HIS 162 N ? ? B MSE 188 B HIS 189 1_555 ? ? ? ? ? ? ? 1.336 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? C ? 8 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 92 ? VAL A 97 ? ALA A 119 VAL A 124 A 2 ARG A 107 ? ASP A 113 ? ARG A 134 ASP A 140 A 3 LEU A 118 ? PHE A 123 ? LEU A 145 PHE A 150 A 4 SER A 127 ? ARG A 133 ? SER A 154 ARG A 160 A 5 THR A 69 ? PRO A 73 ? THR A 96 PRO A 100 A 6 LEU A 44 ? GLY A 48 ? LEU A 71 GLY A 75 A 7 VAL A 176 ? THR A 181 ? VAL A 203 THR A 208 A 8 MSE A 161 ? SER A 166 ? MSE A 188 SER A 193 B 1 TYR A 51 ? CYS A 55 ? TYR A 78 CYS A 82 B 2 GLY A 62 ? VAL A 66 ? GLY A 89 VAL A 93 C 1 ALA B 92 ? VAL B 97 ? ALA B 119 VAL B 124 C 2 ARG B 107 ? ASP B 113 ? ARG B 134 ASP B 140 C 3 LEU B 118 ? PHE B 123 ? LEU B 145 PHE B 150 C 4 SER B 127 ? ARG B 133 ? SER B 154 ARG B 160 C 5 THR B 69 ? PRO B 73 ? THR B 96 PRO B 100 C 6 LEU B 44 ? GLY B 48 ? LEU B 71 GLY B 75 C 7 VAL B 176 ? THR B 181 ? VAL B 203 THR B 208 C 8 MSE B 161 ? SER B 166 ? MSE B 188 SER B 193 D 1 TYR B 51 ? CYS B 55 ? TYR B 78 CYS B 82 D 2 GLY B 62 ? VAL B 66 ? GLY B 89 VAL B 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 96 ? N GLN A 123 O GLN A 110 ? O GLN A 137 A 2 3 N ARG A 107 ? N ARG A 134 O PHE A 123 ? O PHE A 150 A 3 4 N GLU A 120 ? N GLU A 147 O ARG A 131 ? O ARG A 158 A 4 5 O VAL A 130 ? O VAL A 157 N THR A 70 ? N THR A 97 A 5 6 O VAL A 71 ? O VAL A 98 N THR A 45 ? N THR A 72 A 6 7 N LEU A 44 ? N LEU A 71 O LEU A 179 ? O LEU A 206 A 7 8 O THR A 178 ? O THR A 205 N THR A 164 ? N THR A 191 B 1 2 N GLN A 53 ? N GLN A 80 O ARG A 64 ? O ARG A 91 C 1 2 N GLN B 96 ? N GLN B 123 O GLN B 110 ? O GLN B 137 C 2 3 N ARG B 107 ? N ARG B 134 O PHE B 123 ? O PHE B 150 C 3 4 N LYS B 122 ? N LYS B 149 O ALA B 129 ? O ALA B 156 C 4 5 O VAL B 130 ? O VAL B 157 N THR B 70 ? N THR B 97 C 5 6 O VAL B 71 ? O VAL B 98 N THR B 45 ? N THR B 72 C 6 7 N LEU B 44 ? N LEU B 71 O LEU B 179 ? O LEU B 206 C 7 8 O THR B 178 ? O THR B 205 N THR B 164 ? N THR B 191 D 1 2 N GLN B 53 ? N GLN B 80 O ARG B 64 ? O ARG B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 301 ? 4 'BINDING SITE FOR RESIDUE SO4 A 301' AC2 Software A SO4 302 ? 6 'BINDING SITE FOR RESIDUE SO4 A 302' AC3 Software A GOL 303 ? 6 'BINDING SITE FOR RESIDUE GOL A 303' AC4 Software B SO4 301 ? 5 'BINDING SITE FOR RESIDUE SO4 B 301' AC5 Software B SO4 302 ? 4 'BINDING SITE FOR RESIDUE SO4 B 302' AC6 Software B SO4 303 ? 8 'BINDING SITE FOR RESIDUE SO4 B 303' AC7 Software B CL 304 ? 1 'BINDING SITE FOR RESIDUE CL B 304' AC8 Software B CL 305 ? 1 'BINDING SITE FOR RESIDUE CL B 305' AC9 Software B GOL 306 ? 4 'BINDING SITE FOR RESIDUE GOL B 306' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 15 ? ARG A 42 . ? 1_555 ? 2 AC1 4 ARG A 64 ? ARG A 91 . ? 1_555 ? 3 AC1 4 ALA A 135 ? ALA A 162 . ? 1_555 ? 4 AC1 4 CYS A 136 ? CYS A 163 . ? 1_555 ? 5 AC2 6 GLN A 53 ? GLN A 80 . ? 1_555 ? 6 AC2 6 ARG A 131 ? ARG A 158 . ? 1_555 ? 7 AC2 6 ARG A 133 ? ARG A 160 . ? 1_555 ? 8 AC2 6 GLU B 39 ? GLU B 66 . ? 2_564 ? 9 AC2 6 THR B 40 ? THR B 67 . ? 2_564 ? 10 AC2 6 ARG B 79 ? ARG B 106 . ? 2_564 ? 11 AC3 6 TYR A 21 ? TYR A 48 . ? 1_555 ? 12 AC3 6 GLN A 25 ? GLN A 52 . ? 1_555 ? 13 AC3 6 ILE A 29 ? ILE A 56 . ? 1_555 ? 14 AC3 6 ASP A 113 ? ASP A 140 . ? 1_555 ? 15 AC3 6 ASN A 114 ? ASN A 141 . ? 1_555 ? 16 AC3 6 TYR A 115 ? TYR A 142 . ? 1_555 ? 17 AC4 5 CYS A 55 ? CYS A 82 . ? 3_455 ? 18 AC4 5 GLY A 56 ? GLY A 83 . ? 3_455 ? 19 AC4 5 ARG A 64 ? ARG A 91 . ? 3_455 ? 20 AC4 5 SER B 76 ? SER B 103 . ? 1_555 ? 21 AC4 5 ARG B 79 ? ARG B 106 . ? 1_555 ? 22 AC5 4 ARG B 15 ? ARG B 42 . ? 1_555 ? 23 AC5 4 ARG B 64 ? ARG B 91 . ? 1_555 ? 24 AC5 4 ALA B 135 ? ALA B 162 . ? 1_555 ? 25 AC5 4 CYS B 136 ? CYS B 163 . ? 1_555 ? 26 AC6 8 ASP B 102 ? ASP B 129 . ? 1_555 ? 27 AC6 8 ASP B 102 ? ASP B 129 . ? 4_466 ? 28 AC6 8 ARG B 103 ? ARG B 130 . ? 4_466 ? 29 AC6 8 ARG B 103 ? ARG B 130 . ? 1_555 ? 30 AC6 8 ALA B 105 ? ALA B 132 . ? 4_466 ? 31 AC6 8 ALA B 105 ? ALA B 132 . ? 1_555 ? 32 AC6 8 HOH M . ? HOH B 402 . ? 1_555 ? 33 AC6 8 HOH M . ? HOH B 402 . ? 4_466 ? 34 AC7 1 ARG B 107 ? ARG B 134 . ? 1_555 ? 35 AC8 1 ARG B 64 ? ARG B 91 . ? 1_555 ? 36 AC9 4 GLN B 25 ? GLN B 52 . ? 1_555 ? 37 AC9 4 ASP B 113 ? ASP B 140 . ? 1_555 ? 38 AC9 4 ASN B 114 ? ASN B 141 . ? 1_555 ? 39 AC9 4 TYR B 115 ? TYR B 142 . ? 1_555 ? # _atom_sites.entry_id 4MJG _atom_sites.fract_transf_matrix[1][1] 0.010301 _atom_sites.fract_transf_matrix[1][2] 0.005947 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011894 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009520 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 29 ? ? ? A . n A 1 3 LYS 3 30 ? ? ? A . n A 1 4 SER 4 31 ? ? ? A . n A 1 5 ARG 5 32 ? ? ? A . n A 1 6 ASP 6 33 ? ? ? A . n A 1 7 ALA 7 34 34 ALA ALA A . n A 1 8 GLU 8 35 35 GLU GLU A . n A 1 9 PHE 9 36 36 PHE PHE A . n A 1 10 VAL 10 37 37 VAL VAL A . n A 1 11 PRO 11 38 38 PRO PRO A . n A 1 12 PHE 12 39 39 PHE PHE A . n A 1 13 PRO 13 40 40 PRO PRO A . n A 1 14 GLU 14 41 41 GLU GLU A . n A 1 15 ARG 15 42 42 ARG ARG A . n A 1 16 VAL 16 43 43 VAL VAL A . n A 1 17 SER 17 44 44 SER SER A . n A 1 18 ILE 18 45 45 ILE ILE A . n A 1 19 GLU 19 46 46 GLU GLU A . n A 1 20 GLU 20 47 47 GLU GLU A . n A 1 21 TYR 21 48 48 TYR TYR A . n A 1 22 ILE 22 49 49 ILE ILE A . n A 1 23 SER 23 50 50 SER SER A . n A 1 24 ARG 24 51 51 ARG ARG A . n A 1 25 GLN 25 52 52 GLN GLN A . n A 1 26 LEU 26 53 53 LEU LEU A . n A 1 27 PRO 27 54 54 PRO PRO A . n A 1 28 GLU 28 55 55 GLU GLU A . n A 1 29 ILE 29 56 56 ILE ILE A . n A 1 30 SER 30 57 57 SER SER A . n A 1 31 SER 31 58 58 SER SER A . n A 1 32 VAL 32 59 59 VAL VAL A . n A 1 33 ALA 33 60 60 ALA ALA A . n A 1 34 VAL 34 61 61 VAL VAL A . n A 1 35 PRO 35 62 62 PRO PRO A . n A 1 36 VAL 36 63 63 VAL VAL A . n A 1 37 ALA 37 64 64 ALA ALA A . n A 1 38 ALA 38 65 65 ALA ALA A . n A 1 39 GLU 39 66 66 GLU GLU A . n A 1 40 THR 40 67 67 THR THR A . n A 1 41 GLY 41 68 68 GLY GLY A . n A 1 42 GLY 42 69 69 GLY GLY A . n A 1 43 GLU 43 70 70 GLU GLU A . n A 1 44 LEU 44 71 71 LEU LEU A . n A 1 45 THR 45 72 72 THR THR A . n A 1 46 VAL 46 73 73 VAL VAL A . n A 1 47 MSE 47 74 74 MSE MSE A . n A 1 48 GLY 48 75 75 GLY GLY A . n A 1 49 LEU 49 76 76 LEU LEU A . n A 1 50 PRO 50 77 77 PRO PRO A . n A 1 51 TYR 51 78 78 TYR TYR A . n A 1 52 VAL 52 79 79 VAL VAL A . n A 1 53 GLN 53 80 80 GLN GLN A . n A 1 54 VAL 54 81 81 VAL VAL A . n A 1 55 CYS 55 82 82 CYS CYS A . n A 1 56 GLY 56 83 83 GLY GLY A . n A 1 57 THR 57 84 84 THR THR A . n A 1 58 GLY 58 85 85 GLY GLY A . n A 1 59 ASP 59 86 86 ASP ASP A . n A 1 60 THR 60 87 87 THR THR A . n A 1 61 GLN 61 88 88 GLN GLN A . n A 1 62 GLY 62 89 89 GLY GLY A . n A 1 63 TYR 63 90 90 TYR TYR A . n A 1 64 ARG 64 91 91 ARG ARG A . n A 1 65 VAL 65 92 92 VAL VAL A . n A 1 66 VAL 66 93 93 VAL VAL A . n A 1 67 GLY 67 94 94 GLY GLY A . n A 1 68 TYR 68 95 95 TYR TYR A . n A 1 69 THR 69 96 96 THR THR A . n A 1 70 THR 70 97 97 THR THR A . n A 1 71 VAL 71 98 98 VAL VAL A . n A 1 72 ALA 72 99 99 ALA ALA A . n A 1 73 PRO 73 100 100 PRO PRO A . n A 1 74 SER 74 101 101 SER SER A . n A 1 75 MSE 75 102 102 MSE MSE A . n A 1 76 SER 76 103 103 SER SER A . n A 1 77 PHE 77 104 104 PHE PHE A . n A 1 78 GLU 78 105 105 GLU GLU A . n A 1 79 ARG 79 106 106 ARG ARG A . n A 1 80 LEU 80 107 107 LEU LEU A . n A 1 81 GLU 81 108 108 GLU GLU A . n A 1 82 LYS 82 109 109 LYS LYS A . n A 1 83 LEU 83 110 110 LEU LEU A . n A 1 84 VAL 84 111 111 VAL VAL A . n A 1 85 THR 85 112 112 THR THR A . n A 1 86 GLU 86 113 113 GLU GLU A . n A 1 87 ASN 87 114 114 ASN ASN A . n A 1 88 LYS 88 115 115 LYS LYS A . n A 1 89 PRO 89 116 116 PRO PRO A . n A 1 90 ASP 90 117 117 ASP ASP A . n A 1 91 TRP 91 118 118 TRP TRP A . n A 1 92 ALA 92 119 119 ALA ALA A . n A 1 93 VAL 93 120 120 VAL VAL A . n A 1 94 ALA 94 121 121 ALA ALA A . n A 1 95 VAL 95 122 122 VAL VAL A . n A 1 96 GLN 96 123 123 GLN GLN A . n A 1 97 VAL 97 124 124 VAL VAL A . n A 1 98 ASP 98 125 125 ASP ASP A . n A 1 99 LYS 99 126 126 LYS LYS A . n A 1 100 GLN 100 127 127 GLN GLN A . n A 1 101 ILE 101 128 128 ILE ILE A . n A 1 102 ASP 102 129 129 ASP ASP A . n A 1 103 ARG 103 130 130 ARG ARG A . n A 1 104 ASP 104 131 131 ASP ASP A . n A 1 105 ALA 105 132 132 ALA ALA A . n A 1 106 THR 106 133 133 THR THR A . n A 1 107 ARG 107 134 134 ARG ARG A . n A 1 108 GLY 108 135 135 GLY GLY A . n A 1 109 ILE 109 136 136 ILE ILE A . n A 1 110 GLN 110 137 137 GLN GLN A . n A 1 111 LEU 111 138 138 LEU LEU A . n A 1 112 ILE 112 139 139 ILE ILE A . n A 1 113 ASP 113 140 140 ASP ASP A . n A 1 114 ASN 114 141 141 ASN ASN A . n A 1 115 TYR 115 142 142 TYR TYR A . n A 1 116 GLY 116 143 143 GLY GLY A . n A 1 117 GLY 117 144 144 GLY GLY A . n A 1 118 LEU 118 145 145 LEU LEU A . n A 1 119 VAL 119 146 146 VAL VAL A . n A 1 120 GLU 120 147 147 GLU GLU A . n A 1 121 PHE 121 148 148 PHE PHE A . n A 1 122 LYS 122 149 149 LYS LYS A . n A 1 123 PHE 123 150 150 PHE PHE A . n A 1 124 SER 124 151 151 SER SER A . n A 1 125 GLU 125 152 152 GLU GLU A . n A 1 126 ASP 126 153 153 ASP ASP A . n A 1 127 SER 127 154 154 SER SER A . n A 1 128 ILE 128 155 155 ILE ILE A . n A 1 129 ALA 129 156 156 ALA ALA A . n A 1 130 VAL 130 157 157 VAL VAL A . n A 1 131 ARG 131 158 158 ARG ARG A . n A 1 132 SER 132 159 159 SER SER A . n A 1 133 ARG 133 160 160 ARG ARG A . n A 1 134 SER 134 161 161 SER SER A . n A 1 135 ALA 135 162 162 ALA ALA A . n A 1 136 CYS 136 163 163 CYS CYS A . n A 1 137 LEU 137 164 164 LEU LEU A . n A 1 138 PRO 138 165 165 PRO PRO A . n A 1 139 THR 139 166 166 THR THR A . n A 1 140 ASN 140 167 167 ASN ASN A . n A 1 141 LYS 141 168 168 LYS LYS A . n A 1 142 PRO 142 169 169 PRO PRO A . n A 1 143 LEU 143 170 170 LEU LEU A . n A 1 144 ASP 144 171 171 ASP ASP A . n A 1 145 ASP 145 172 172 ASP ASP A . n A 1 146 PRO 146 173 173 PRO PRO A . n A 1 147 GLY 147 174 174 GLY GLY A . n A 1 148 GLN 148 175 175 GLN GLN A . n A 1 149 PHE 149 176 176 PHE PHE A . n A 1 150 VAL 150 177 177 VAL VAL A . n A 1 151 LEU 151 178 178 LEU LEU A . n A 1 152 PRO 152 179 179 PRO PRO A . n A 1 153 SER 153 180 180 SER SER A . n A 1 154 VAL 154 181 181 VAL VAL A . n A 1 155 GLU 155 182 182 GLU GLU A . n A 1 156 GLU 156 183 183 GLU GLU A . n A 1 157 ALA 157 184 184 ALA ALA A . n A 1 158 PHE 158 185 185 PHE PHE A . n A 1 159 PRO 159 186 186 PRO PRO A . n A 1 160 GLY 160 187 187 GLY GLY A . n A 1 161 MSE 161 188 188 MSE MSE A . n A 1 162 HIS 162 189 189 HIS HIS A . n A 1 163 VAL 163 190 190 VAL VAL A . n A 1 164 THR 164 191 191 THR THR A . n A 1 165 ILE 165 192 192 ILE ILE A . n A 1 166 SER 166 193 193 SER SER A . n A 1 167 ASP 167 194 194 ASP ASP A . n A 1 168 ASN 168 195 195 ASN ASN A . n A 1 169 THR 169 196 196 THR THR A . n A 1 170 ASN 170 197 197 ASN ASN A . n A 1 171 PRO 171 198 198 PRO PRO A . n A 1 172 ASP 172 199 199 ASP ASP A . n A 1 173 LEU 173 200 200 LEU LEU A . n A 1 174 HIS 174 201 201 HIS HIS A . n A 1 175 PRO 175 202 202 PRO PRO A . n A 1 176 VAL 176 203 203 VAL VAL A . n A 1 177 PRO 177 204 204 PRO PRO A . n A 1 178 THR 178 205 205 THR THR A . n A 1 179 LEU 179 206 206 LEU LEU A . n A 1 180 THR 180 207 207 THR THR A . n A 1 181 THR 181 208 208 THR THR A . n A 1 182 GLY 182 209 209 GLY GLY A . n A 1 183 ALA 183 210 210 ALA ALA A . n A 1 184 HIS 184 211 ? ? ? A . n A 1 185 VAL 185 212 ? ? ? A . n A 1 186 THR 186 213 ? ? ? A . n A 1 187 PRO 187 214 ? ? ? A . n A 1 188 GLN 188 215 ? ? ? A . n A 1 189 SER 189 216 ? ? ? A . n A 1 190 GLY 190 217 ? ? ? A . n A 1 191 THR 191 218 ? ? ? A . n A 1 192 GLN 192 219 ? ? ? A . n A 1 193 SER 193 220 ? ? ? A . n A 1 194 GLY 194 221 ? ? ? A . n A 1 195 THR 195 222 ? ? ? A . n A 1 196 GLN 196 223 ? ? ? A . n A 1 197 SER 197 224 ? ? ? A . n A 1 198 GLY 198 225 ? ? ? A . n A 1 199 SER 199 226 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 ALA 2 29 ? ? ? B . n B 1 3 LYS 3 30 ? ? ? B . n B 1 4 SER 4 31 ? ? ? B . n B 1 5 ARG 5 32 ? ? ? B . n B 1 6 ASP 6 33 ? ? ? B . n B 1 7 ALA 7 34 34 ALA ALA B . n B 1 8 GLU 8 35 35 GLU GLU B . n B 1 9 PHE 9 36 36 PHE PHE B . n B 1 10 VAL 10 37 37 VAL VAL B . n B 1 11 PRO 11 38 38 PRO PRO B . n B 1 12 PHE 12 39 39 PHE PHE B . n B 1 13 PRO 13 40 40 PRO PRO B . n B 1 14 GLU 14 41 41 GLU GLU B . n B 1 15 ARG 15 42 42 ARG ARG B . n B 1 16 VAL 16 43 43 VAL VAL B . n B 1 17 SER 17 44 44 SER SER B . n B 1 18 ILE 18 45 45 ILE ILE B . n B 1 19 GLU 19 46 46 GLU GLU B . n B 1 20 GLU 20 47 47 GLU GLU B . n B 1 21 TYR 21 48 48 TYR TYR B . n B 1 22 ILE 22 49 49 ILE ILE B . n B 1 23 SER 23 50 50 SER SER B . n B 1 24 ARG 24 51 51 ARG ARG B . n B 1 25 GLN 25 52 52 GLN GLN B . n B 1 26 LEU 26 53 53 LEU LEU B . n B 1 27 PRO 27 54 54 PRO PRO B . n B 1 28 GLU 28 55 55 GLU GLU B . n B 1 29 ILE 29 56 56 ILE ILE B . n B 1 30 SER 30 57 57 SER SER B . n B 1 31 SER 31 58 58 SER SER B . n B 1 32 VAL 32 59 59 VAL VAL B . n B 1 33 ALA 33 60 60 ALA ALA B . n B 1 34 VAL 34 61 61 VAL VAL B . n B 1 35 PRO 35 62 62 PRO PRO B . n B 1 36 VAL 36 63 63 VAL VAL B . n B 1 37 ALA 37 64 64 ALA ALA B . n B 1 38 ALA 38 65 65 ALA ALA B . n B 1 39 GLU 39 66 66 GLU GLU B . n B 1 40 THR 40 67 67 THR THR B . n B 1 41 GLY 41 68 68 GLY GLY B . n B 1 42 GLY 42 69 69 GLY GLY B . n B 1 43 GLU 43 70 70 GLU GLU B . n B 1 44 LEU 44 71 71 LEU LEU B . n B 1 45 THR 45 72 72 THR THR B . n B 1 46 VAL 46 73 73 VAL VAL B . n B 1 47 MSE 47 74 74 MSE MSE B . n B 1 48 GLY 48 75 75 GLY GLY B . n B 1 49 LEU 49 76 76 LEU LEU B . n B 1 50 PRO 50 77 77 PRO PRO B . n B 1 51 TYR 51 78 78 TYR TYR B . n B 1 52 VAL 52 79 79 VAL VAL B . n B 1 53 GLN 53 80 80 GLN GLN B . n B 1 54 VAL 54 81 81 VAL VAL B . n B 1 55 CYS 55 82 82 CYS CYS B . n B 1 56 GLY 56 83 83 GLY GLY B . n B 1 57 THR 57 84 84 THR THR B . n B 1 58 GLY 58 85 85 GLY GLY B . n B 1 59 ASP 59 86 86 ASP ASP B . n B 1 60 THR 60 87 87 THR THR B . n B 1 61 GLN 61 88 88 GLN GLN B . n B 1 62 GLY 62 89 89 GLY GLY B . n B 1 63 TYR 63 90 90 TYR TYR B . n B 1 64 ARG 64 91 91 ARG ARG B . n B 1 65 VAL 65 92 92 VAL VAL B . n B 1 66 VAL 66 93 93 VAL VAL B . n B 1 67 GLY 67 94 94 GLY GLY B . n B 1 68 TYR 68 95 95 TYR TYR B . n B 1 69 THR 69 96 96 THR THR B . n B 1 70 THR 70 97 97 THR THR B . n B 1 71 VAL 71 98 98 VAL VAL B . n B 1 72 ALA 72 99 99 ALA ALA B . n B 1 73 PRO 73 100 100 PRO PRO B . n B 1 74 SER 74 101 101 SER SER B . n B 1 75 MSE 75 102 102 MSE MSE B . n B 1 76 SER 76 103 103 SER SER B . n B 1 77 PHE 77 104 104 PHE PHE B . n B 1 78 GLU 78 105 105 GLU GLU B . n B 1 79 ARG 79 106 106 ARG ARG B . n B 1 80 LEU 80 107 107 LEU LEU B . n B 1 81 GLU 81 108 108 GLU GLU B . n B 1 82 LYS 82 109 109 LYS LYS B . n B 1 83 LEU 83 110 110 LEU LEU B . n B 1 84 VAL 84 111 111 VAL VAL B . n B 1 85 THR 85 112 112 THR THR B . n B 1 86 GLU 86 113 113 GLU GLU B . n B 1 87 ASN 87 114 114 ASN ASN B . n B 1 88 LYS 88 115 115 LYS LYS B . n B 1 89 PRO 89 116 116 PRO PRO B . n B 1 90 ASP 90 117 117 ASP ASP B . n B 1 91 TRP 91 118 118 TRP TRP B . n B 1 92 ALA 92 119 119 ALA ALA B . n B 1 93 VAL 93 120 120 VAL VAL B . n B 1 94 ALA 94 121 121 ALA ALA B . n B 1 95 VAL 95 122 122 VAL VAL B . n B 1 96 GLN 96 123 123 GLN GLN B . n B 1 97 VAL 97 124 124 VAL VAL B . n B 1 98 ASP 98 125 125 ASP ASP B . n B 1 99 LYS 99 126 126 LYS LYS B . n B 1 100 GLN 100 127 127 GLN GLN B . n B 1 101 ILE 101 128 128 ILE ILE B . n B 1 102 ASP 102 129 129 ASP ASP B . n B 1 103 ARG 103 130 130 ARG ARG B . n B 1 104 ASP 104 131 131 ASP ASP B . n B 1 105 ALA 105 132 132 ALA ALA B . n B 1 106 THR 106 133 133 THR THR B . n B 1 107 ARG 107 134 134 ARG ARG B . n B 1 108 GLY 108 135 135 GLY GLY B . n B 1 109 ILE 109 136 136 ILE ILE B . n B 1 110 GLN 110 137 137 GLN GLN B . n B 1 111 LEU 111 138 138 LEU LEU B . n B 1 112 ILE 112 139 139 ILE ILE B . n B 1 113 ASP 113 140 140 ASP ASP B . n B 1 114 ASN 114 141 141 ASN ASN B . n B 1 115 TYR 115 142 142 TYR TYR B . n B 1 116 GLY 116 143 143 GLY GLY B . n B 1 117 GLY 117 144 144 GLY GLY B . n B 1 118 LEU 118 145 145 LEU LEU B . n B 1 119 VAL 119 146 146 VAL VAL B . n B 1 120 GLU 120 147 147 GLU GLU B . n B 1 121 PHE 121 148 148 PHE PHE B . n B 1 122 LYS 122 149 149 LYS LYS B . n B 1 123 PHE 123 150 150 PHE PHE B . n B 1 124 SER 124 151 151 SER SER B . n B 1 125 GLU 125 152 152 GLU GLU B . n B 1 126 ASP 126 153 153 ASP ASP B . n B 1 127 SER 127 154 154 SER SER B . n B 1 128 ILE 128 155 155 ILE ILE B . n B 1 129 ALA 129 156 156 ALA ALA B . n B 1 130 VAL 130 157 157 VAL VAL B . n B 1 131 ARG 131 158 158 ARG ARG B . n B 1 132 SER 132 159 159 SER SER B . n B 1 133 ARG 133 160 160 ARG ARG B . n B 1 134 SER 134 161 161 SER SER B . n B 1 135 ALA 135 162 162 ALA ALA B . n B 1 136 CYS 136 163 163 CYS CYS B . n B 1 137 LEU 137 164 164 LEU LEU B . n B 1 138 PRO 138 165 165 PRO PRO B . n B 1 139 THR 139 166 166 THR THR B . n B 1 140 ASN 140 167 167 ASN ASN B . n B 1 141 LYS 141 168 168 LYS LYS B . n B 1 142 PRO 142 169 169 PRO PRO B . n B 1 143 LEU 143 170 170 LEU LEU B . n B 1 144 ASP 144 171 171 ASP ASP B . n B 1 145 ASP 145 172 172 ASP ASP B . n B 1 146 PRO 146 173 173 PRO PRO B . n B 1 147 GLY 147 174 174 GLY GLY B . n B 1 148 GLN 148 175 175 GLN GLN B . n B 1 149 PHE 149 176 176 PHE PHE B . n B 1 150 VAL 150 177 177 VAL VAL B . n B 1 151 LEU 151 178 178 LEU LEU B . n B 1 152 PRO 152 179 179 PRO PRO B . n B 1 153 SER 153 180 180 SER SER B . n B 1 154 VAL 154 181 181 VAL VAL B . n B 1 155 GLU 155 182 182 GLU GLU B . n B 1 156 GLU 156 183 183 GLU GLU B . n B 1 157 ALA 157 184 184 ALA ALA B . n B 1 158 PHE 158 185 185 PHE PHE B . n B 1 159 PRO 159 186 186 PRO PRO B . n B 1 160 GLY 160 187 187 GLY GLY B . n B 1 161 MSE 161 188 188 MSE MSE B . n B 1 162 HIS 162 189 189 HIS HIS B . n B 1 163 VAL 163 190 190 VAL VAL B . n B 1 164 THR 164 191 191 THR THR B . n B 1 165 ILE 165 192 192 ILE ILE B . n B 1 166 SER 166 193 193 SER SER B . n B 1 167 ASP 167 194 194 ASP ASP B . n B 1 168 ASN 168 195 195 ASN ASN B . n B 1 169 THR 169 196 196 THR THR B . n B 1 170 ASN 170 197 197 ASN ASN B . n B 1 171 PRO 171 198 198 PRO PRO B . n B 1 172 ASP 172 199 199 ASP ASP B . n B 1 173 LEU 173 200 200 LEU LEU B . n B 1 174 HIS 174 201 201 HIS HIS B . n B 1 175 PRO 175 202 202 PRO PRO B . n B 1 176 VAL 176 203 203 VAL VAL B . n B 1 177 PRO 177 204 204 PRO PRO B . n B 1 178 THR 178 205 205 THR THR B . n B 1 179 LEU 179 206 206 LEU LEU B . n B 1 180 THR 180 207 207 THR THR B . n B 1 181 THR 181 208 208 THR THR B . n B 1 182 GLY 182 209 209 GLY GLY B . n B 1 183 ALA 183 210 210 ALA ALA B . n B 1 184 HIS 184 211 ? ? ? B . n B 1 185 VAL 185 212 ? ? ? B . n B 1 186 THR 186 213 ? ? ? B . n B 1 187 PRO 187 214 ? ? ? B . n B 1 188 GLN 188 215 ? ? ? B . n B 1 189 SER 189 216 ? ? ? B . n B 1 190 GLY 190 217 ? ? ? B . n B 1 191 THR 191 218 ? ? ? B . n B 1 192 GLN 192 219 ? ? ? B . n B 1 193 SER 193 220 ? ? ? B . n B 1 194 GLY 194 221 ? ? ? B . n B 1 195 THR 195 222 ? ? ? B . n B 1 196 GLN 196 223 ? ? ? B . n B 1 197 SER 197 224 ? ? ? B . n B 1 198 GLY 198 225 ? ? ? B . n B 1 199 SER 199 226 ? ? ? B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 301 301 SO4 SO4 A . D 2 SO4 1 302 303 SO4 SO4 A . E 3 GOL 1 303 307 GOL GOL A . F 2 SO4 1 301 300 SO4 SO4 B . G 2 SO4 1 302 302 SO4 SO4 B . H 2 SO4 1 303 304 SO4 SO4 B . I 4 CL 1 304 305 CL CL B . J 4 CL 1 305 306 CL CL B . K 3 GOL 1 306 308 GOL GOL B . L 5 HOH 1 401 309 HOH HOH A . L 5 HOH 2 402 311 HOH HOH A . L 5 HOH 3 403 312 HOH HOH A . L 5 HOH 4 404 313 HOH HOH A . L 5 HOH 5 405 314 HOH HOH A . M 5 HOH 1 401 310 HOH HOH B . M 5 HOH 2 402 315 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 47 A MSE 74 ? MET SELENOMETHIONINE 2 A MSE 75 A MSE 102 ? MET SELENOMETHIONINE 3 A MSE 161 A MSE 188 ? MET SELENOMETHIONINE 4 B MSE 47 B MSE 74 ? MET SELENOMETHIONINE 5 B MSE 75 B MSE 102 ? MET SELENOMETHIONINE 6 B MSE 161 B MSE 188 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,L 2 1 B,F,G,H,I,J,K,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id SO4 _pdbx_struct_special_symmetry.auth_seq_id 303 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id SO4 _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-16 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -37.2020 23.9980 32.1280 0.0973 0.0830 0.1260 0.0072 0.0098 -0.0033 2.5620 3.6211 2.6828 0.9920 0.2047 -0.5453 -0.0878 -0.1151 0.2030 -0.0494 0.0693 -0.3233 -0.0464 0.0271 0.3732 'X-RAY DIFFRACTION' 2 ? refined -42.2240 50.5390 57.5970 0.1567 0.1255 0.2002 0.1215 -0.0955 -0.0754 5.2556 2.6145 2.6959 1.2156 0.3433 -0.3449 -0.1431 0.1883 -0.0451 -0.1681 0.2202 -0.0711 0.0436 0.0032 0.1180 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 34 A 210 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 34 B 210 ? . . . . ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 29-226 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4MJG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 35 ? ? -107.07 41.85 2 1 ASP A 172 ? ? -155.92 66.42 3 1 PRO A 198 ? ? -63.99 56.16 4 1 LEU A 200 ? ? 69.99 -178.26 5 1 GLU B 35 ? ? -107.04 42.46 6 1 ASP B 172 ? ? -155.50 66.90 7 1 LEU B 200 ? ? 75.71 161.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 106 ? CG ? A ARG 79 CG 2 1 Y 1 A ARG 106 ? CD ? A ARG 79 CD 3 1 Y 1 A ARG 106 ? NE ? A ARG 79 NE 4 1 Y 1 A ARG 106 ? CZ ? A ARG 79 CZ 5 1 Y 1 A ARG 106 ? NH1 ? A ARG 79 NH1 6 1 Y 1 A ARG 106 ? NH2 ? A ARG 79 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 29 ? A ALA 2 3 1 Y 1 A LYS 30 ? A LYS 3 4 1 Y 1 A SER 31 ? A SER 4 5 1 Y 1 A ARG 32 ? A ARG 5 6 1 Y 1 A ASP 33 ? A ASP 6 7 1 Y 1 A HIS 211 ? A HIS 184 8 1 Y 1 A VAL 212 ? A VAL 185 9 1 Y 1 A THR 213 ? A THR 186 10 1 Y 1 A PRO 214 ? A PRO 187 11 1 Y 1 A GLN 215 ? A GLN 188 12 1 Y 1 A SER 216 ? A SER 189 13 1 Y 1 A GLY 217 ? A GLY 190 14 1 Y 1 A THR 218 ? A THR 191 15 1 Y 1 A GLN 219 ? A GLN 192 16 1 Y 1 A SER 220 ? A SER 193 17 1 Y 1 A GLY 221 ? A GLY 194 18 1 Y 1 A THR 222 ? A THR 195 19 1 Y 1 A GLN 223 ? A GLN 196 20 1 Y 1 A SER 224 ? A SER 197 21 1 Y 1 A GLY 225 ? A GLY 198 22 1 Y 1 A SER 226 ? A SER 199 23 1 Y 1 B GLY 0 ? B GLY 1 24 1 Y 1 B ALA 29 ? B ALA 2 25 1 Y 1 B LYS 30 ? B LYS 3 26 1 Y 1 B SER 31 ? B SER 4 27 1 Y 1 B ARG 32 ? B ARG 5 28 1 Y 1 B ASP 33 ? B ASP 6 29 1 Y 1 B HIS 211 ? B HIS 184 30 1 Y 1 B VAL 212 ? B VAL 185 31 1 Y 1 B THR 213 ? B THR 186 32 1 Y 1 B PRO 214 ? B PRO 187 33 1 Y 1 B GLN 215 ? B GLN 188 34 1 Y 1 B SER 216 ? B SER 189 35 1 Y 1 B GLY 217 ? B GLY 190 36 1 Y 1 B THR 218 ? B THR 191 37 1 Y 1 B GLN 219 ? B GLN 192 38 1 Y 1 B SER 220 ? B SER 193 39 1 Y 1 B GLY 221 ? B GLY 194 40 1 Y 1 B THR 222 ? B THR 195 41 1 Y 1 B GLN 223 ? B GLN 196 42 1 Y 1 B SER 224 ? B SER 197 43 1 Y 1 B GLY 225 ? B GLY 198 44 1 Y 1 B SER 226 ? B SER 199 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 'CHLORIDE ION' CL 5 water HOH #