HEADER TRANSFERASE 04-SEP-13 4MK3 TITLE CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER FROM TITLE 2 CUPRIAVIDUS METALLIDURANS CH34, TARGET EFI-507362, WITH BOUND TITLE 3 GLUTATHIONE SULFINIC ACID (GSO2H) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GST; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUPRIAVIDUS METALLIDURANS; SOURCE 3 ORGANISM_TAXID: 266264; SOURCE 4 STRAIN: CH34 / ATCC 43123 / DSM 2839; SOURCE 5 GENE: GST-1, RMET_2957; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS GST, GLUTATHIONE S-TRANSFERASE FOLD, ENZYME FUNCTION INITIATIVE, EFI, KEYWDS 2 STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TORO,R.BHOSLE,M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS, AUTHOR 3 B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT,R.N.ARMSTRONG, AUTHOR 4 S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 3 20-SEP-23 4MK3 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4MK3 1 REMARK REVDAT 1 18-SEP-13 4MK3 0 JRNL AUTH R.TORO,R.BHOSLE,M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER, JRNL AUTH 4 J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER JRNL TITL 2 FROM CUPRIAVIDUS METALLIDURANS CH34, TARGET EFI-507362, WITH JRNL TITL 3 BOUND GLUTATHIONE SULFINIC ACID (GSO2H) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.7288 - 3.5262 1.00 2920 138 0.1621 0.1945 REMARK 3 2 3.5262 - 2.7997 1.00 2741 153 0.1613 0.2160 REMARK 3 3 2.7997 - 2.4461 1.00 2700 155 0.1485 0.1594 REMARK 3 4 2.4461 - 2.2225 1.00 2701 141 0.1441 0.1659 REMARK 3 5 2.2225 - 2.0633 1.00 2683 150 0.1403 0.1510 REMARK 3 6 2.0633 - 1.9417 1.00 2684 125 0.1458 0.1575 REMARK 3 7 1.9417 - 1.8444 1.00 2667 157 0.1503 0.1701 REMARK 3 8 1.8444 - 1.7642 1.00 2631 155 0.1576 0.1800 REMARK 3 9 1.7642 - 1.6963 1.00 2651 148 0.1554 0.1906 REMARK 3 10 1.6963 - 1.6377 1.00 2661 125 0.1570 0.2087 REMARK 3 11 1.6377 - 1.5865 1.00 2656 146 0.1544 0.1907 REMARK 3 12 1.5865 - 1.5412 1.00 2624 125 0.1747 0.2180 REMARK 3 13 1.5412 - 1.5010 1.00 2670 123 0.1837 0.2186 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1757 REMARK 3 ANGLE : 1.295 2379 REMARK 3 CHIRALITY : 0.064 257 REMARK 3 PLANARITY : 0.006 310 REMARK 3 DIHEDRAL : 13.005 678 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2669 15.2098 32.5217 REMARK 3 T TENSOR REMARK 3 T11: 0.1899 T22: 0.2140 REMARK 3 T33: 0.1524 T12: -0.0182 REMARK 3 T13: -0.0362 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.1772 L22: 1.8935 REMARK 3 L33: 2.3209 L12: 0.1819 REMARK 3 L13: -0.2586 L23: -1.4152 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.2050 S13: 0.0320 REMARK 3 S21: 0.2846 S22: -0.0823 S23: -0.1539 REMARK 3 S31: -0.2378 S32: 0.2526 S33: 0.0479 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1119 16.4683 32.1447 REMARK 3 T TENSOR REMARK 3 T11: 0.2365 T22: 0.1896 REMARK 3 T33: 0.1611 T12: 0.0006 REMARK 3 T13: 0.0327 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.2460 L22: 2.7125 REMARK 3 L33: 1.4269 L12: -0.7476 REMARK 3 L13: 0.3847 L23: -1.8461 REMARK 3 S TENSOR REMARK 3 S11: 0.1221 S12: -0.3305 S13: 0.1649 REMARK 3 S21: 0.3734 S22: -0.0427 S23: 0.1649 REMARK 3 S31: -0.5300 S32: -0.2075 S33: -0.0695 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0126 26.3830 22.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.2600 T22: 0.3034 REMARK 3 T33: 0.3119 T12: 0.0998 REMARK 3 T13: -0.0213 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 0.0244 L22: 3.3845 REMARK 3 L33: 5.5800 L12: 0.2281 REMARK 3 L13: -0.0850 L23: 1.8105 REMARK 3 S TENSOR REMARK 3 S11: -0.2214 S12: -0.1789 S13: 0.8260 REMARK 3 S21: 0.1428 S22: -0.2222 S23: 0.5853 REMARK 3 S31: -0.7867 S32: -1.0913 S33: 0.4095 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6127 10.5163 16.3182 REMARK 3 T TENSOR REMARK 3 T11: 0.1003 T22: 0.1008 REMARK 3 T33: 0.0875 T12: -0.0078 REMARK 3 T13: -0.0079 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 4.2798 L22: 4.5153 REMARK 3 L33: 3.2608 L12: -2.0794 REMARK 3 L13: 0.6350 L23: -1.2857 REMARK 3 S TENSOR REMARK 3 S11: -0.1429 S12: -0.1996 S13: 0.0346 REMARK 3 S21: -0.0015 S22: 0.1771 S23: 0.0275 REMARK 3 S31: -0.0057 S32: -0.0191 S33: -0.0363 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9651 0.2571 13.7257 REMARK 3 T TENSOR REMARK 3 T11: 0.2481 T22: 0.2830 REMARK 3 T33: 0.2415 T12: 0.1360 REMARK 3 T13: 0.0356 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.2711 L22: 2.6835 REMARK 3 L33: 1.1090 L12: -0.2571 REMARK 3 L13: 0.1583 L23: -0.6332 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: -0.0808 S13: -0.2960 REMARK 3 S21: -0.1554 S22: -0.0320 S23: -0.3679 REMARK 3 S31: 0.4633 S32: 0.4660 S33: 0.0623 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7319 17.3428 11.1575 REMARK 3 T TENSOR REMARK 3 T11: 0.1207 T22: 0.1590 REMARK 3 T33: 0.1343 T12: 0.0159 REMARK 3 T13: 0.0043 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.8655 L22: 1.7743 REMARK 3 L33: 2.2806 L12: 0.0041 REMARK 3 L13: 0.4110 L23: -0.1603 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.1672 S13: -0.0446 REMARK 3 S21: -0.1459 S22: -0.0424 S23: -0.1362 REMARK 3 S31: 0.0100 S32: 0.2686 S33: -0.0015 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7229 23.5104 15.3847 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.1983 REMARK 3 T33: 0.1695 T12: 0.0105 REMARK 3 T13: 0.0040 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.6265 L22: 1.6656 REMARK 3 L33: 5.3911 L12: 1.2274 REMARK 3 L13: 1.1845 L23: 1.2843 REMARK 3 S TENSOR REMARK 3 S11: -0.0360 S12: 0.1176 S13: 0.0370 REMARK 3 S21: -0.0761 S22: 0.0325 S23: -0.2450 REMARK 3 S31: -0.0493 S32: 0.6313 S33: 0.0652 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MK3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36929 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 0.63300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3TOT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (21.88 MG/ML IN 10 MM HEPES, REMARK 280 PH 7.5, 150 MM SODIUM CHLORIDE, 5% GLYCEROL, 5 MM GSH), REMARK 280 RESERVOIR (0.1 M MES, PH 6.5, 0.1 M MAGNESIUM CHLORIDE, 30% REMARK 280 PEG400), CRYOPROTECTION (RESERVOIR + 20% DIETHYLENE GLYCOL), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.77650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.30550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.30550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.38825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.30550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.30550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.16475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.30550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.30550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.38825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.30550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.30550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 67.16475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.77650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.77650 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 GLY A 204 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 544 O HOH A 586 2.13 REMARK 500 O HOH A 521 O HOH A 556 2.17 REMARK 500 O HOH A 476 O HOH A 542 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 62 -158.34 -90.24 REMARK 500 ALA A 143 -129.84 50.56 REMARK 500 ALA A 143 -128.10 50.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 467 O REMARK 620 2 HOH A 519 O 88.2 REMARK 620 3 HOH A 521 O 174.4 89.6 REMARK 620 4 HOH A 605 O 95.1 86.4 89.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSF A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-507362 RELATED DB: TARGETTRACK DBREF 4MK3 A 1 204 UNP Q1LJ46 Q1LJ46_RALME 1 204 SEQADV 4MK3 MET A -21 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -20 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -19 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -18 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -17 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -16 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 HIS A -15 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 SER A -14 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 SER A -13 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 GLY A -12 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 VAL A -11 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 ASP A -10 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 LEU A -9 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 GLY A -8 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 THR A -7 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 GLU A -6 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 ASN A -5 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 LEU A -4 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 TYR A -3 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 PHE A -2 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 GLN A -1 UNP Q1LJ46 EXPRESSION TAG SEQADV 4MK3 SER A 0 UNP Q1LJ46 EXPRESSION TAG SEQRES 1 A 226 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 226 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 A 226 ALA SER GLN THR SER PRO TYR ALA ARG LYS VAL ARG VAL SEQRES 4 A 226 VAL LEU ALA GLU LYS LYS ILE ASP TYR GLU MET ILE GLU SEQRES 5 A 226 GLU ASN VAL TRP SER PRO ASP THR THR ILE GLY ARG PHE SEQRES 6 A 226 ASN PRO LEU GLY LYS VAL PRO CYS LEU VAL MET GLU ASP SEQRES 7 A 226 GLY GLY ALA VAL PHE ASP SER ARG VAL ILE ALA GLU TYR SEQRES 8 A 226 ALA ASP THR LEU SER PRO VAL SER ARG LEU ILE PRO GLN SEQRES 9 A 226 GLY SER ARG GLU ARG LEU GLU VAL ARG CYS TRP GLU ALA SEQRES 10 A 226 LEU ALA ASP GLY LEU LEU ASP ALA ALA LEU LEU ALA ARG SEQRES 11 A 226 LEU GLU VAL THR GLN ARG LYS GLU SER GLU ARG SER GLU SEQRES 12 A 226 SER TRP VAL GLN ARG GLN ARG SER LYS ILE ASP ALA ALA SEQRES 13 A 226 LEU THR ALA MET SER THR GLY LEU ALA ASP LYS THR TRP SEQRES 14 A 226 CYS THR GLY THR HIS TYR THR LEU ALA ASP VAL ALA VAL SEQRES 15 A 226 GLY CYS ALA LEU ALA TYR LEU ASP PHE ARG PHE PRO ASP SEQRES 16 A 226 ILE ALA TRP ARG ASP ARG HIS PRO ASN LEU VAL ALA PHE SEQRES 17 A 226 GLN GLU LYS ILE GLU LYS ARG GLN SER PHE ILE ASP THR SEQRES 18 A 226 GLU PRO PRO ARG GLY HET MG A 301 1 HET PG4 A 302 31 HET PG4 A 303 31 HET GSF A 304 37 HETNAM MG MAGNESIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM GSF L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE HETSYN GSF GLUTATHIONE SULFINATE FORMUL 2 MG MG 2+ FORMUL 3 PG4 2(C8 H18 O5) FORMUL 5 GSF C10 H17 N3 O8 S FORMUL 6 HOH *208(H2 O) HELIX 1 1 SER A 9 LYS A 23 1 15 HELIX 2 2 THR A 39 PHE A 43 5 5 HELIX 3 3 ASP A 62 LEU A 73 1 12 HELIX 4 4 GLY A 83 GLN A 113 1 31 HELIX 5 5 LYS A 115 ARG A 119 5 5 HELIX 6 6 SER A 120 ALA A 143 1 24 HELIX 7 7 THR A 154 PHE A 171 1 18 HELIX 8 8 ALA A 175 HIS A 180 1 6 HELIX 9 9 HIS A 180 GLU A 191 1 12 HELIX 10 10 ARG A 193 ASP A 198 1 6 SHEET 1 A 4 GLU A 27 GLU A 30 0 SHEET 2 A 4 LYS A 2 ALA A 5 1 N LEU A 3 O GLU A 27 SHEET 3 A 4 CYS A 51 VAL A 53 -1 O VAL A 53 N LYS A 2 SHEET 4 A 4 ALA A 59 VAL A 60 -1 O VAL A 60 N LEU A 52 LINK MG MG A 301 O HOH A 467 1555 1555 2.09 LINK MG MG A 301 O HOH A 519 1555 1555 2.07 LINK MG MG A 301 O HOH A 521 1555 1555 2.04 LINK MG MG A 301 O HOH A 605 1555 1555 2.06 CISPEP 1 VAL A 49 PRO A 50 0 3.70 CISPEP 2 PHE A 61 ASP A 62 0 -4.06 SITE 1 AC1 6 HOH A 464 HOH A 467 HOH A 511 HOH A 519 SITE 2 AC1 6 HOH A 521 HOH A 605 SITE 1 AC2 10 SER A 6 GLU A 30 GLU A 31 ASN A 32 SITE 2 AC2 10 SER A 35 GLY A 83 GLU A 86 HOH A 419 SITE 3 AC2 10 HOH A 524 HOH A 569 SITE 1 AC3 6 GLU A 89 CYS A 92 TRP A 93 ALA A 137 SITE 2 AC3 6 HOH A 474 HOH A 546 SITE 1 AC4 22 SER A 9 PRO A 10 TYR A 11 VAL A 33 SITE 2 AC4 22 TRP A 34 GLY A 47 LYS A 48 VAL A 49 SITE 3 AC4 22 PRO A 50 ASP A 62 SER A 63 ARG A 126 SITE 4 AC4 22 LYS A 130 HOH A 401 HOH A 412 HOH A 447 SITE 5 AC4 22 HOH A 481 HOH A 488 HOH A 489 HOH A 502 SITE 6 AC4 22 HOH A 513 HOH A 594 CRYST1 70.611 70.611 89.553 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014162 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014162 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011167 0.00000