data_4N1F # _entry.id 4N1F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4N1F pdb_00004n1f 10.2210/pdb4n1f/pdb RCSB RCSB082630 ? ? WWPDB D_1000082630 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2F8P . unspecified PDB 1QV0 . unspecified PDB 1JF2 . unspecified PDB 1S36 . unspecified PDB 1SL7 . unspecified PDB 1EJ3 . unspecified PDB 4N1G . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4N1F _pdbx_database_status.recvd_initial_deposition_date 2013-10-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Natashin, P.V.' 1 'Markova, S.V.' 2 'Lee, J.' 3 'Vysotski, E.S.' 4 'Liu, Z.J.' 5 # _citation.id primary _citation.title ;Crystal structures of the F88Y obelin mutant before and after bioluminescence provide molecular insight into spectral tuning among hydromedusan photoproteins ; _citation.journal_abbrev 'Febs J.' _citation.journal_volume 281 _citation.page_first 1432 _citation.page_last 1445 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24418253 _citation.pdbx_database_id_DOI 10.1111/febs.12715 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Natashin, P.V.' 1 ? primary 'Markova, S.V.' 2 ? primary 'Lee, J.' 3 ? primary 'Vysotski, E.S.' 4 ? primary 'Liu, Z.J.' 5 ? # _cell.entry_id 4N1F _cell.length_a 73.329 _cell.length_b 73.329 _cell.length_c 53.078 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4N1F _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Obelin 22254.904 1 ? 'S2A, F88Y' ? ? 2 non-polymer syn C2-HYDROPEROXY-COELENTERAZINE 455.462 1 ? ? ? ? 3 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name OBL # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYG KEIAFPQYLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDL DNSGDLDVDEMTRQHLGFWYTLDPEADGLYGNGVP ; _entity_poly.pdbx_seq_one_letter_code_can ;MASKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYG KEIAFPQYLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDL DNSGDLDVDEMTRQHLGFWYTLDPEADGLYGNGVP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 LYS n 1 5 TYR n 1 6 ALA n 1 7 VAL n 1 8 LYS n 1 9 LEU n 1 10 LYS n 1 11 THR n 1 12 ASP n 1 13 PHE n 1 14 ASP n 1 15 ASN n 1 16 PRO n 1 17 ARG n 1 18 TRP n 1 19 ILE n 1 20 LYS n 1 21 ARG n 1 22 HIS n 1 23 LYS n 1 24 HIS n 1 25 MET n 1 26 PHE n 1 27 ASP n 1 28 PHE n 1 29 LEU n 1 30 ASP n 1 31 ILE n 1 32 ASN n 1 33 GLY n 1 34 ASN n 1 35 GLY n 1 36 LYS n 1 37 ILE n 1 38 THR n 1 39 LEU n 1 40 ASP n 1 41 GLU n 1 42 ILE n 1 43 VAL n 1 44 SER n 1 45 LYS n 1 46 ALA n 1 47 SER n 1 48 ASP n 1 49 ASP n 1 50 ILE n 1 51 CYS n 1 52 ALA n 1 53 LYS n 1 54 LEU n 1 55 GLU n 1 56 ALA n 1 57 THR n 1 58 PRO n 1 59 GLU n 1 60 GLN n 1 61 THR n 1 62 LYS n 1 63 ARG n 1 64 HIS n 1 65 GLN n 1 66 VAL n 1 67 CYS n 1 68 VAL n 1 69 GLU n 1 70 ALA n 1 71 PHE n 1 72 PHE n 1 73 ARG n 1 74 GLY n 1 75 CYS n 1 76 GLY n 1 77 MET n 1 78 GLU n 1 79 TYR n 1 80 GLY n 1 81 LYS n 1 82 GLU n 1 83 ILE n 1 84 ALA n 1 85 PHE n 1 86 PRO n 1 87 GLN n 1 88 TYR n 1 89 LEU n 1 90 ASP n 1 91 GLY n 1 92 TRP n 1 93 LYS n 1 94 GLN n 1 95 LEU n 1 96 ALA n 1 97 THR n 1 98 SER n 1 99 GLU n 1 100 LEU n 1 101 LYS n 1 102 LYS n 1 103 TRP n 1 104 ALA n 1 105 ARG n 1 106 ASN n 1 107 GLU n 1 108 PRO n 1 109 THR n 1 110 LEU n 1 111 ILE n 1 112 ARG n 1 113 GLU n 1 114 TRP n 1 115 GLY n 1 116 ASP n 1 117 ALA n 1 118 VAL n 1 119 PHE n 1 120 ASP n 1 121 ILE n 1 122 PHE n 1 123 ASP n 1 124 LYS n 1 125 ASP n 1 126 GLY n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 ILE n 1 131 THR n 1 132 LEU n 1 133 ASP n 1 134 GLU n 1 135 TRP n 1 136 LYS n 1 137 ALA n 1 138 TYR n 1 139 GLY n 1 140 LYS n 1 141 ILE n 1 142 SER n 1 143 GLY n 1 144 ILE n 1 145 SER n 1 146 PRO n 1 147 SER n 1 148 GLN n 1 149 GLU n 1 150 ASP n 1 151 CYS n 1 152 GLU n 1 153 ALA n 1 154 THR n 1 155 PHE n 1 156 ARG n 1 157 HIS n 1 158 CYS n 1 159 ASP n 1 160 LEU n 1 161 ASP n 1 162 ASN n 1 163 SER n 1 164 GLY n 1 165 ASP n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 ASP n 1 170 GLU n 1 171 MET n 1 172 THR n 1 173 ARG n 1 174 GLN n 1 175 HIS n 1 176 LEU n 1 177 GLY n 1 178 PHE n 1 179 TRP n 1 180 TYR n 1 181 THR n 1 182 LEU n 1 183 ASP n 1 184 PRO n 1 185 GLU n 1 186 ALA n 1 187 ASP n 1 188 GLY n 1 189 LEU n 1 190 TYR n 1 191 GLY n 1 192 ASN n 1 193 GLY n 1 194 VAL n 1 195 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Black sea hydrozoan' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Obelia longissima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32570 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 Gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OBL_OBELO _struct_ref.pdbx_db_accession Q27709 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSSKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYG KEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDL DNSGDLDVDEMTRQHLGFWYTLDPEADGLYGNGVP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4N1F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 195 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q27709 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 195 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4N1F ALA A 2 ? UNP Q27709 SER 2 'engineered mutation' 2 1 1 4N1F TYR A 88 ? UNP Q27709 PHE 88 'engineered mutation' 88 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 CZH non-polymer . C2-HYDROPEROXY-COELENTERAZINE '8-BENZYL-2-HYDROPEROXY-2-(4-HYDROXY-BENZYL)-6-(4-HYDROXY-PHENYL)-2H-IMIDAZO[1,2-A]PYRAZIN-3-ONE' 'C26 H21 N3 O5' 455.462 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4N1F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.21 _exptl_crystal.density_percent_sol 61.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '2.1M DL-Malic acid, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-12-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9789 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9789 # _reflns.entry_id 4N1F _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.087 _reflns.number_obs 16926 _reflns.number_all 16926 _reflns.percent_possible_obs 99.88 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 33.510 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.09 _reflns_shell.d_res_low 2.16 _reflns_shell.percent_possible_all 99.12 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4N1F _refine.ls_number_reflns_obs 16906 _refine.ls_number_reflns_all 16908 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.996 _refine.ls_d_res_high 2.087 _refine.ls_percent_reflns_obs 99.86 _refine.ls_R_factor_obs 0.1744 _refine.ls_R_factor_all 0.2163 _refine.ls_R_factor_R_work 0.1716 _refine.ls_R_factor_R_free 0.1992 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.00 _refine.ls_number_reflns_R_free 1691 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.7928 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 1QV0 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.B_iso_max 101.390 _refine.B_iso_min 19.860 _refine.pdbx_overall_phase_error 20.0800 _refine.occupancy_max 1.000 _refine.occupancy_min 0.320 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1498 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 1696 _refine_hist.d_res_high 2.087 _refine_hist.d_res_low 42.996 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1593 0.005 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2161 0.876 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 218 0.067 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 281 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 583 14.877 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.0873 2.1487 12 99.0000 1256 . 0.2116 0.2697 . 142 . 1398 . 'X-RAY DIFFRACTION' . 2.1487 2.2181 12 100.0000 1258 . 0.2010 0.2386 . 147 . 1405 . 'X-RAY DIFFRACTION' . 2.2181 2.2974 12 100.0000 1256 . 0.1899 0.2504 . 138 . 1394 . 'X-RAY DIFFRACTION' . 2.2974 2.3893 12 100.0000 1256 . 0.1846 0.1835 . 138 . 1394 . 'X-RAY DIFFRACTION' . 2.3893 2.4981 12 100.0000 1256 . 0.1770 0.2124 . 141 . 1397 . 'X-RAY DIFFRACTION' . 2.4981 2.6297 12 100.0000 1270 . 0.1891 0.2148 . 138 . 1408 . 'X-RAY DIFFRACTION' . 2.6297 2.7945 12 100.0000 1257 . 0.1874 0.2466 . 145 . 1402 . 'X-RAY DIFFRACTION' . 2.7945 3.0102 12 100.0000 1266 . 0.1971 0.1986 . 138 . 1404 . 'X-RAY DIFFRACTION' . 3.0102 3.3130 12 100.0000 1276 . 0.1915 0.2397 . 147 . 1423 . 'X-RAY DIFFRACTION' . 3.3130 3.7922 12 100.0000 1270 . 0.1559 0.2118 . 133 . 1403 . 'X-RAY DIFFRACTION' . 3.7922 4.7767 12 100.0000 1278 . 0.1443 0.1551 . 144 . 1422 . 'X-RAY DIFFRACTION' . 4.7767 43.0054 12 100.0000 1316 . 0.1594 0.1660 . 140 . 1456 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4N1F _struct.title 'Crystal Structure of F88Y obelin mutant from Obelia longissima at 2.09 Angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4N1F _struct_keywords.pdbx_keywords 'LUMINESCENT PROTEIN' _struct_keywords.text 'Luminescent Protein, calcium binding, EF-hand' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 15 ? ASP A 30 ? ASN A 15 ASP A 30 1 ? 16 HELX_P HELX_P2 2 THR A 38 ? ASP A 48 ? THR A 38 ASP A 48 1 ? 11 HELX_P HELX_P3 3 ASP A 49 ? LEU A 54 ? ASP A 49 LEU A 54 1 ? 6 HELX_P HELX_P4 4 THR A 57 ? GLY A 74 ? THR A 57 GLY A 74 1 ? 18 HELX_P HELX_P5 5 ALA A 84 ? ARG A 105 ? ALA A 84 ARG A 105 1 ? 22 HELX_P HELX_P6 6 THR A 109 ? PHE A 122 ? THR A 109 PHE A 122 1 ? 14 HELX_P HELX_P7 7 THR A 131 ? GLY A 143 ? THR A 131 GLY A 143 1 ? 13 HELX_P HELX_P8 8 SER A 147 ? CYS A 158 ? SER A 147 CYS A 158 1 ? 12 HELX_P HELX_P9 9 VAL A 168 ? TYR A 180 ? VAL A 168 TYR A 180 1 ? 13 HELX_P HELX_P10 10 ASP A 183 ? ASP A 187 ? ASP A 183 ASP A 187 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 129 ? ILE A 130 ? THR A 129 ILE A 130 A 2 LEU A 166 ? ASP A 167 ? LEU A 166 ASP A 167 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 130 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 130 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LEU _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 166 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 166 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CZH _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE CZH A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 HIS A 22 ? HIS A 22 . ? 1_555 ? 2 AC1 14 MET A 25 ? MET A 25 . ? 1_555 ? 3 AC1 14 ILE A 50 ? ILE A 50 . ? 1_555 ? 4 AC1 14 TYR A 88 ? TYR A 88 . ? 1_555 ? 5 AC1 14 TRP A 92 ? TRP A 92 . ? 1_555 ? 6 AC1 14 TRP A 114 ? TRP A 114 . ? 1_555 ? 7 AC1 14 GLY A 115 ? GLY A 115 . ? 1_555 ? 8 AC1 14 TRP A 135 ? TRP A 135 . ? 1_555 ? 9 AC1 14 TYR A 138 ? TYR A 138 . ? 1_555 ? 10 AC1 14 MET A 171 ? MET A 171 . ? 1_555 ? 11 AC1 14 HIS A 175 ? HIS A 175 . ? 1_555 ? 12 AC1 14 TRP A 179 ? TRP A 179 . ? 1_555 ? 13 AC1 14 TYR A 190 ? TYR A 190 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH A 302 . ? 1_555 ? # _database_PDB_matrix.entry_id 4N1F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4N1F _atom_sites.fract_transf_matrix[1][1] 0.013637 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013637 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018840 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 TYR 5 5 ? ? ? A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 MET 25 25 25 MET MET A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 MET 77 77 77 MET MET A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 TRP 114 114 114 TRP TRP A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 LYS 124 124 ? ? ? A . n A 1 125 ASP 125 125 ? ? ? A . n A 1 126 GLY 126 126 ? ? ? A . n A 1 127 SER 127 127 ? ? ? A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 TRP 135 135 135 TRP TRP A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 PHE 155 155 155 PHE PHE A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 HIS 157 157 157 HIS HIS A . n A 1 158 CYS 158 158 158 CYS CYS A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 MET 171 171 171 MET MET A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 HIS 175 175 175 HIS HIS A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 TRP 179 179 179 TRP TRP A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 PRO 195 195 195 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CZH 1 201 1 CZH CZH A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 22 HOH HOH A . C 3 HOH 22 322 23 HOH HOH A . C 3 HOH 23 323 24 HOH HOH A . C 3 HOH 24 324 25 HOH HOH A . C 3 HOH 25 325 26 HOH HOH A . C 3 HOH 26 326 27 HOH HOH A . C 3 HOH 27 327 28 HOH HOH A . C 3 HOH 28 328 29 HOH HOH A . C 3 HOH 29 329 31 HOH HOH A . C 3 HOH 30 330 32 HOH HOH A . C 3 HOH 31 331 33 HOH HOH A . C 3 HOH 32 332 34 HOH HOH A . C 3 HOH 33 333 35 HOH HOH A . C 3 HOH 34 334 36 HOH HOH A . C 3 HOH 35 335 37 HOH HOH A . C 3 HOH 36 336 38 HOH HOH A . C 3 HOH 37 337 39 HOH HOH A . C 3 HOH 38 338 40 HOH HOH A . C 3 HOH 39 339 41 HOH HOH A . C 3 HOH 40 340 42 HOH HOH A . C 3 HOH 41 341 43 HOH HOH A . C 3 HOH 42 342 44 HOH HOH A . C 3 HOH 43 343 45 HOH HOH A . C 3 HOH 44 344 46 HOH HOH A . C 3 HOH 45 345 47 HOH HOH A . C 3 HOH 46 346 48 HOH HOH A . C 3 HOH 47 347 49 HOH HOH A . C 3 HOH 48 348 50 HOH HOH A . C 3 HOH 49 349 51 HOH HOH A . C 3 HOH 50 350 52 HOH HOH A . C 3 HOH 51 351 53 HOH HOH A . C 3 HOH 52 352 54 HOH HOH A . C 3 HOH 53 353 55 HOH HOH A . C 3 HOH 54 354 56 HOH HOH A . C 3 HOH 55 355 57 HOH HOH A . C 3 HOH 56 356 58 HOH HOH A . C 3 HOH 57 357 59 HOH HOH A . C 3 HOH 58 358 60 HOH HOH A . C 3 HOH 59 359 61 HOH HOH A . C 3 HOH 60 360 62 HOH HOH A . C 3 HOH 61 361 63 HOH HOH A . C 3 HOH 62 362 64 HOH HOH A . C 3 HOH 63 363 65 HOH HOH A . C 3 HOH 64 364 66 HOH HOH A . C 3 HOH 65 365 67 HOH HOH A . C 3 HOH 66 366 68 HOH HOH A . C 3 HOH 67 367 69 HOH HOH A . C 3 HOH 68 368 70 HOH HOH A . C 3 HOH 69 369 71 HOH HOH A . C 3 HOH 70 370 72 HOH HOH A . C 3 HOH 71 371 73 HOH HOH A . C 3 HOH 72 372 74 HOH HOH A . C 3 HOH 73 373 75 HOH HOH A . C 3 HOH 74 374 76 HOH HOH A . C 3 HOH 75 375 77 HOH HOH A . C 3 HOH 76 376 78 HOH HOH A . C 3 HOH 77 377 79 HOH HOH A . C 3 HOH 78 378 81 HOH HOH A . C 3 HOH 79 379 84 HOH HOH A . C 3 HOH 80 380 85 HOH HOH A . C 3 HOH 81 381 87 HOH HOH A . C 3 HOH 82 382 88 HOH HOH A . C 3 HOH 83 383 89 HOH HOH A . C 3 HOH 84 384 90 HOH HOH A . C 3 HOH 85 385 91 HOH HOH A . C 3 HOH 86 386 92 HOH HOH A . C 3 HOH 87 387 93 HOH HOH A . C 3 HOH 88 388 94 HOH HOH A . C 3 HOH 89 389 95 HOH HOH A . C 3 HOH 90 390 96 HOH HOH A . C 3 HOH 91 391 98 HOH HOH A . C 3 HOH 92 392 100 HOH HOH A . C 3 HOH 93 393 101 HOH HOH A . C 3 HOH 94 394 102 HOH HOH A . C 3 HOH 95 395 103 HOH HOH A . C 3 HOH 96 396 104 HOH HOH A . C 3 HOH 97 397 105 HOH HOH A . C 3 HOH 98 398 106 HOH HOH A . C 3 HOH 99 399 107 HOH HOH A . C 3 HOH 100 400 108 HOH HOH A . C 3 HOH 101 401 109 HOH HOH A . C 3 HOH 102 402 110 HOH HOH A . C 3 HOH 103 403 114 HOH HOH A . C 3 HOH 104 404 116 HOH HOH A . C 3 HOH 105 405 117 HOH HOH A . C 3 HOH 106 406 118 HOH HOH A . C 3 HOH 107 407 119 HOH HOH A . C 3 HOH 108 408 120 HOH HOH A . C 3 HOH 109 409 121 HOH HOH A . C 3 HOH 110 410 122 HOH HOH A . C 3 HOH 111 411 124 HOH HOH A . C 3 HOH 112 412 125 HOH HOH A . C 3 HOH 113 413 127 HOH HOH A . C 3 HOH 114 414 129 HOH HOH A . C 3 HOH 115 415 130 HOH HOH A . C 3 HOH 116 416 131 HOH HOH A . C 3 HOH 117 417 132 HOH HOH A . C 3 HOH 118 418 133 HOH HOH A . C 3 HOH 119 419 134 HOH HOH A . C 3 HOH 120 420 135 HOH HOH A . C 3 HOH 121 421 138 HOH HOH A . C 3 HOH 122 422 139 HOH HOH A . C 3 HOH 123 423 140 HOH HOH A . C 3 HOH 124 424 141 HOH HOH A . C 3 HOH 125 425 143 HOH HOH A . C 3 HOH 126 426 144 HOH HOH A . C 3 HOH 127 427 146 HOH HOH A . C 3 HOH 128 428 147 HOH HOH A . C 3 HOH 129 429 148 HOH HOH A . C 3 HOH 130 430 149 HOH HOH A . C 3 HOH 131 431 150 HOH HOH A . C 3 HOH 132 432 151 HOH HOH A . C 3 HOH 133 433 152 HOH HOH A . C 3 HOH 134 434 153 HOH HOH A . C 3 HOH 135 435 154 HOH HOH A . C 3 HOH 136 436 155 HOH HOH A . C 3 HOH 137 437 156 HOH HOH A . C 3 HOH 138 438 157 HOH HOH A . C 3 HOH 139 439 158 HOH HOH A . C 3 HOH 140 440 159 HOH HOH A . C 3 HOH 141 441 160 HOH HOH A . C 3 HOH 142 442 161 HOH HOH A . C 3 HOH 143 443 162 HOH HOH A . C 3 HOH 144 444 163 HOH HOH A . C 3 HOH 145 445 164 HOH HOH A . C 3 HOH 146 446 165 HOH HOH A . C 3 HOH 147 447 166 HOH HOH A . C 3 HOH 148 448 167 HOH HOH A . C 3 HOH 149 449 168 HOH HOH A . C 3 HOH 150 450 169 HOH HOH A . C 3 HOH 151 451 170 HOH HOH A . C 3 HOH 152 452 171 HOH HOH A . C 3 HOH 153 453 172 HOH HOH A . C 3 HOH 154 454 173 HOH HOH A . C 3 HOH 155 455 174 HOH HOH A . C 3 HOH 156 456 176 HOH HOH A . C 3 HOH 157 457 177 HOH HOH A . C 3 HOH 158 458 178 HOH HOH A . C 3 HOH 159 459 179 HOH HOH A . C 3 HOH 160 460 180 HOH HOH A . C 3 HOH 161 461 181 HOH HOH A . C 3 HOH 162 462 182 HOH HOH A . C 3 HOH 163 463 183 HOH HOH A . C 3 HOH 164 464 184 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-19 2 'Structure model' 1 1 2014-04-23 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 69.5298 _pdbx_refine_tls.origin_y 24.4798 _pdbx_refine_tls.origin_z 25.6833 _pdbx_refine_tls.T[1][1] 0.3161 _pdbx_refine_tls.T[2][2] 0.2127 _pdbx_refine_tls.T[3][3] 0.2345 _pdbx_refine_tls.T[1][2] -0.0363 _pdbx_refine_tls.T[1][3] 0.0810 _pdbx_refine_tls.T[2][3] 0.0284 _pdbx_refine_tls.L[1][1] 2.9260 _pdbx_refine_tls.L[2][2] 4.6597 _pdbx_refine_tls.L[3][3] 2.3955 _pdbx_refine_tls.L[1][2] -0.3594 _pdbx_refine_tls.L[1][3] 0.0271 _pdbx_refine_tls.L[2][3] -0.2476 _pdbx_refine_tls.S[1][1] -0.1043 _pdbx_refine_tls.S[1][2] 0.2657 _pdbx_refine_tls.S[1][3] 0.0858 _pdbx_refine_tls.S[2][1] -0.1255 _pdbx_refine_tls.S[2][2] 0.2975 _pdbx_refine_tls.S[2][3] 0.3126 _pdbx_refine_tls.S[3][1] -0.3228 _pdbx_refine_tls.S[3][2] -0.0934 _pdbx_refine_tls.S[3][3] -0.1853 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 12 ? ? -143.64 57.64 2 1 ASP A 49 ? ? -89.42 -74.86 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A TYR 5 ? A TYR 5 6 1 Y 1 A LYS 124 ? A LYS 124 7 1 Y 1 A ASP 125 ? A ASP 125 8 1 Y 1 A GLY 126 ? A GLY 126 9 1 Y 1 A SER 127 ? A SER 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 CZH N1 N N N 88 CZH C2 C N S 89 CZH C3 C N N 90 CZH N4 N N N 91 CZH C5 C N N 92 CZH C6 C N N 93 CZH N7 N N N 94 CZH C8 C N N 95 CZH C9 C N N 96 CZH C10 C N N 97 CZH C11 C Y N 98 CZH C12 C Y N 99 CZH C13 C Y N 100 CZH C14 C Y N 101 CZH C15 C Y N 102 CZH C16 C Y N 103 CZH O17 O N N 104 CZH O18 O N N 105 CZH C19 C Y N 106 CZH C20 C Y N 107 CZH C21 C Y N 108 CZH C22 C Y N 109 CZH C23 C Y N 110 CZH C24 C Y N 111 CZH O25 O N N 112 CZH C26 C N N 113 CZH C27 C Y N 114 CZH C28 C Y N 115 CZH C29 C Y N 116 CZH C30 C Y N 117 CZH C31 C Y N 118 CZH C32 C Y N 119 CZH O33 O N N 120 CZH O34 O N N 121 CZH H5 H N N 122 CZH H101 H N N 123 CZH H102 H N N 124 CZH H12 H N N 125 CZH H13 H N N 126 CZH H15 H N N 127 CZH H16 H N N 128 CZH H17 H N N 129 CZH H20 H N N 130 CZH H21 H N N 131 CZH H23 H N N 132 CZH H24 H N N 133 CZH H25 H N N 134 CZH H261 H N N 135 CZH H262 H N N 136 CZH H28 H N N 137 CZH H29 H N N 138 CZH H30 H N N 139 CZH H31 H N N 140 CZH H32 H N N 141 CZH H34 H N N 142 GLN N N N N 143 GLN CA C N S 144 GLN C C N N 145 GLN O O N N 146 GLN CB C N N 147 GLN CG C N N 148 GLN CD C N N 149 GLN OE1 O N N 150 GLN NE2 N N N 151 GLN OXT O N N 152 GLN H H N N 153 GLN H2 H N N 154 GLN HA H N N 155 GLN HB2 H N N 156 GLN HB3 H N N 157 GLN HG2 H N N 158 GLN HG3 H N N 159 GLN HE21 H N N 160 GLN HE22 H N N 161 GLN HXT H N N 162 GLU N N N N 163 GLU CA C N S 164 GLU C C N N 165 GLU O O N N 166 GLU CB C N N 167 GLU CG C N N 168 GLU CD C N N 169 GLU OE1 O N N 170 GLU OE2 O N N 171 GLU OXT O N N 172 GLU H H N N 173 GLU H2 H N N 174 GLU HA H N N 175 GLU HB2 H N N 176 GLU HB3 H N N 177 GLU HG2 H N N 178 GLU HG3 H N N 179 GLU HE2 H N N 180 GLU HXT H N N 181 GLY N N N N 182 GLY CA C N N 183 GLY C C N N 184 GLY O O N N 185 GLY OXT O N N 186 GLY H H N N 187 GLY H2 H N N 188 GLY HA2 H N N 189 GLY HA3 H N N 190 GLY HXT H N N 191 HIS N N N N 192 HIS CA C N S 193 HIS C C N N 194 HIS O O N N 195 HIS CB C N N 196 HIS CG C Y N 197 HIS ND1 N Y N 198 HIS CD2 C Y N 199 HIS CE1 C Y N 200 HIS NE2 N Y N 201 HIS OXT O N N 202 HIS H H N N 203 HIS H2 H N N 204 HIS HA H N N 205 HIS HB2 H N N 206 HIS HB3 H N N 207 HIS HD1 H N N 208 HIS HD2 H N N 209 HIS HE1 H N N 210 HIS HE2 H N N 211 HIS HXT H N N 212 HOH O O N N 213 HOH H1 H N N 214 HOH H2 H N N 215 ILE N N N N 216 ILE CA C N S 217 ILE C C N N 218 ILE O O N N 219 ILE CB C N S 220 ILE CG1 C N N 221 ILE CG2 C N N 222 ILE CD1 C N N 223 ILE OXT O N N 224 ILE H H N N 225 ILE H2 H N N 226 ILE HA H N N 227 ILE HB H N N 228 ILE HG12 H N N 229 ILE HG13 H N N 230 ILE HG21 H N N 231 ILE HG22 H N N 232 ILE HG23 H N N 233 ILE HD11 H N N 234 ILE HD12 H N N 235 ILE HD13 H N N 236 ILE HXT H N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MET N N N N 285 MET CA C N S 286 MET C C N N 287 MET O O N N 288 MET CB C N N 289 MET CG C N N 290 MET SD S N N 291 MET CE C N N 292 MET OXT O N N 293 MET H H N N 294 MET H2 H N N 295 MET HA H N N 296 MET HB2 H N N 297 MET HB3 H N N 298 MET HG2 H N N 299 MET HG3 H N N 300 MET HE1 H N N 301 MET HE2 H N N 302 MET HE3 H N N 303 MET HXT H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 CZH N1 C2 sing N N 83 CZH N1 C9 doub N N 84 CZH C2 C3 sing N N 85 CZH C2 C10 sing N N 86 CZH C2 O33 sing N N 87 CZH C3 N4 sing N N 88 CZH C3 O18 doub N N 89 CZH N4 C5 sing N N 90 CZH N4 C9 sing N N 91 CZH C5 C6 doub N N 92 CZH C5 H5 sing N N 93 CZH C6 N7 sing N N 94 CZH C6 C19 sing N N 95 CZH N7 C8 doub N N 96 CZH C8 C9 sing N N 97 CZH C8 C26 sing N N 98 CZH C10 C11 sing N N 99 CZH C10 H101 sing N N 100 CZH C10 H102 sing N N 101 CZH C11 C12 doub Y N 102 CZH C11 C16 sing Y N 103 CZH C12 C13 sing Y N 104 CZH C12 H12 sing N N 105 CZH C13 C14 doub Y N 106 CZH C13 H13 sing N N 107 CZH C14 C15 sing Y N 108 CZH C14 O17 sing N N 109 CZH C15 C16 doub Y N 110 CZH C15 H15 sing N N 111 CZH C16 H16 sing N N 112 CZH O17 H17 sing N N 113 CZH C19 C20 doub Y N 114 CZH C19 C24 sing Y N 115 CZH C20 C21 sing Y N 116 CZH C20 H20 sing N N 117 CZH C21 C22 doub Y N 118 CZH C21 H21 sing N N 119 CZH C22 C23 sing Y N 120 CZH C22 O25 sing N N 121 CZH C23 C24 doub Y N 122 CZH C23 H23 sing N N 123 CZH C24 H24 sing N N 124 CZH O25 H25 sing N N 125 CZH C26 C27 sing N N 126 CZH C26 H261 sing N N 127 CZH C26 H262 sing N N 128 CZH C27 C28 doub Y N 129 CZH C27 C32 sing Y N 130 CZH C28 C29 sing Y N 131 CZH C28 H28 sing N N 132 CZH C29 C30 doub Y N 133 CZH C29 H29 sing N N 134 CZH C30 C31 sing Y N 135 CZH C30 H30 sing N N 136 CZH C31 C32 doub Y N 137 CZH C31 H31 sing N N 138 CZH C32 H32 sing N N 139 CZH O33 O34 sing N N 140 CZH O34 H34 sing N N 141 GLN N CA sing N N 142 GLN N H sing N N 143 GLN N H2 sing N N 144 GLN CA C sing N N 145 GLN CA CB sing N N 146 GLN CA HA sing N N 147 GLN C O doub N N 148 GLN C OXT sing N N 149 GLN CB CG sing N N 150 GLN CB HB2 sing N N 151 GLN CB HB3 sing N N 152 GLN CG CD sing N N 153 GLN CG HG2 sing N N 154 GLN CG HG3 sing N N 155 GLN CD OE1 doub N N 156 GLN CD NE2 sing N N 157 GLN NE2 HE21 sing N N 158 GLN NE2 HE22 sing N N 159 GLN OXT HXT sing N N 160 GLU N CA sing N N 161 GLU N H sing N N 162 GLU N H2 sing N N 163 GLU CA C sing N N 164 GLU CA CB sing N N 165 GLU CA HA sing N N 166 GLU C O doub N N 167 GLU C OXT sing N N 168 GLU CB CG sing N N 169 GLU CB HB2 sing N N 170 GLU CB HB3 sing N N 171 GLU CG CD sing N N 172 GLU CG HG2 sing N N 173 GLU CG HG3 sing N N 174 GLU CD OE1 doub N N 175 GLU CD OE2 sing N N 176 GLU OE2 HE2 sing N N 177 GLU OXT HXT sing N N 178 GLY N CA sing N N 179 GLY N H sing N N 180 GLY N H2 sing N N 181 GLY CA C sing N N 182 GLY CA HA2 sing N N 183 GLY CA HA3 sing N N 184 GLY C O doub N N 185 GLY C OXT sing N N 186 GLY OXT HXT sing N N 187 HIS N CA sing N N 188 HIS N H sing N N 189 HIS N H2 sing N N 190 HIS CA C sing N N 191 HIS CA CB sing N N 192 HIS CA HA sing N N 193 HIS C O doub N N 194 HIS C OXT sing N N 195 HIS CB CG sing N N 196 HIS CB HB2 sing N N 197 HIS CB HB3 sing N N 198 HIS CG ND1 sing Y N 199 HIS CG CD2 doub Y N 200 HIS ND1 CE1 doub Y N 201 HIS ND1 HD1 sing N N 202 HIS CD2 NE2 sing Y N 203 HIS CD2 HD2 sing N N 204 HIS CE1 NE2 sing Y N 205 HIS CE1 HE1 sing N N 206 HIS NE2 HE2 sing N N 207 HIS OXT HXT sing N N 208 HOH O H1 sing N N 209 HOH O H2 sing N N 210 ILE N CA sing N N 211 ILE N H sing N N 212 ILE N H2 sing N N 213 ILE CA C sing N N 214 ILE CA CB sing N N 215 ILE CA HA sing N N 216 ILE C O doub N N 217 ILE C OXT sing N N 218 ILE CB CG1 sing N N 219 ILE CB CG2 sing N N 220 ILE CB HB sing N N 221 ILE CG1 CD1 sing N N 222 ILE CG1 HG12 sing N N 223 ILE CG1 HG13 sing N N 224 ILE CG2 HG21 sing N N 225 ILE CG2 HG22 sing N N 226 ILE CG2 HG23 sing N N 227 ILE CD1 HD11 sing N N 228 ILE CD1 HD12 sing N N 229 ILE CD1 HD13 sing N N 230 ILE OXT HXT sing N N 231 LEU N CA sing N N 232 LEU N H sing N N 233 LEU N H2 sing N N 234 LEU CA C sing N N 235 LEU CA CB sing N N 236 LEU CA HA sing N N 237 LEU C O doub N N 238 LEU C OXT sing N N 239 LEU CB CG sing N N 240 LEU CB HB2 sing N N 241 LEU CB HB3 sing N N 242 LEU CG CD1 sing N N 243 LEU CG CD2 sing N N 244 LEU CG HG sing N N 245 LEU CD1 HD11 sing N N 246 LEU CD1 HD12 sing N N 247 LEU CD1 HD13 sing N N 248 LEU CD2 HD21 sing N N 249 LEU CD2 HD22 sing N N 250 LEU CD2 HD23 sing N N 251 LEU OXT HXT sing N N 252 LYS N CA sing N N 253 LYS N H sing N N 254 LYS N H2 sing N N 255 LYS CA C sing N N 256 LYS CA CB sing N N 257 LYS CA HA sing N N 258 LYS C O doub N N 259 LYS C OXT sing N N 260 LYS CB CG sing N N 261 LYS CB HB2 sing N N 262 LYS CB HB3 sing N N 263 LYS CG CD sing N N 264 LYS CG HG2 sing N N 265 LYS CG HG3 sing N N 266 LYS CD CE sing N N 267 LYS CD HD2 sing N N 268 LYS CD HD3 sing N N 269 LYS CE NZ sing N N 270 LYS CE HE2 sing N N 271 LYS CE HE3 sing N N 272 LYS NZ HZ1 sing N N 273 LYS NZ HZ2 sing N N 274 LYS NZ HZ3 sing N N 275 LYS OXT HXT sing N N 276 MET N CA sing N N 277 MET N H sing N N 278 MET N H2 sing N N 279 MET CA C sing N N 280 MET CA CB sing N N 281 MET CA HA sing N N 282 MET C O doub N N 283 MET C OXT sing N N 284 MET CB CG sing N N 285 MET CB HB2 sing N N 286 MET CB HB3 sing N N 287 MET CG SD sing N N 288 MET CG HG2 sing N N 289 MET CG HG3 sing N N 290 MET SD CE sing N N 291 MET CE HE1 sing N N 292 MET CE HE2 sing N N 293 MET CE HE3 sing N N 294 MET OXT HXT sing N N 295 PHE N CA sing N N 296 PHE N H sing N N 297 PHE N H2 sing N N 298 PHE CA C sing N N 299 PHE CA CB sing N N 300 PHE CA HA sing N N 301 PHE C O doub N N 302 PHE C OXT sing N N 303 PHE CB CG sing N N 304 PHE CB HB2 sing N N 305 PHE CB HB3 sing N N 306 PHE CG CD1 doub Y N 307 PHE CG CD2 sing Y N 308 PHE CD1 CE1 sing Y N 309 PHE CD1 HD1 sing N N 310 PHE CD2 CE2 doub Y N 311 PHE CD2 HD2 sing N N 312 PHE CE1 CZ doub Y N 313 PHE CE1 HE1 sing N N 314 PHE CE2 CZ sing Y N 315 PHE CE2 HE2 sing N N 316 PHE CZ HZ sing N N 317 PHE OXT HXT sing N N 318 PRO N CA sing N N 319 PRO N CD sing N N 320 PRO N H sing N N 321 PRO CA C sing N N 322 PRO CA CB sing N N 323 PRO CA HA sing N N 324 PRO C O doub N N 325 PRO C OXT sing N N 326 PRO CB CG sing N N 327 PRO CB HB2 sing N N 328 PRO CB HB3 sing N N 329 PRO CG CD sing N N 330 PRO CG HG2 sing N N 331 PRO CG HG3 sing N N 332 PRO CD HD2 sing N N 333 PRO CD HD3 sing N N 334 PRO OXT HXT sing N N 335 SER N CA sing N N 336 SER N H sing N N 337 SER N H2 sing N N 338 SER CA C sing N N 339 SER CA CB sing N N 340 SER CA HA sing N N 341 SER C O doub N N 342 SER C OXT sing N N 343 SER CB OG sing N N 344 SER CB HB2 sing N N 345 SER CB HB3 sing N N 346 SER OG HG sing N N 347 SER OXT HXT sing N N 348 THR N CA sing N N 349 THR N H sing N N 350 THR N H2 sing N N 351 THR CA C sing N N 352 THR CA CB sing N N 353 THR CA HA sing N N 354 THR C O doub N N 355 THR C OXT sing N N 356 THR CB OG1 sing N N 357 THR CB CG2 sing N N 358 THR CB HB sing N N 359 THR OG1 HG1 sing N N 360 THR CG2 HG21 sing N N 361 THR CG2 HG22 sing N N 362 THR CG2 HG23 sing N N 363 THR OXT HXT sing N N 364 TRP N CA sing N N 365 TRP N H sing N N 366 TRP N H2 sing N N 367 TRP CA C sing N N 368 TRP CA CB sing N N 369 TRP CA HA sing N N 370 TRP C O doub N N 371 TRP C OXT sing N N 372 TRP CB CG sing N N 373 TRP CB HB2 sing N N 374 TRP CB HB3 sing N N 375 TRP CG CD1 doub Y N 376 TRP CG CD2 sing Y N 377 TRP CD1 NE1 sing Y N 378 TRP CD1 HD1 sing N N 379 TRP CD2 CE2 doub Y N 380 TRP CD2 CE3 sing Y N 381 TRP NE1 CE2 sing Y N 382 TRP NE1 HE1 sing N N 383 TRP CE2 CZ2 sing Y N 384 TRP CE3 CZ3 doub Y N 385 TRP CE3 HE3 sing N N 386 TRP CZ2 CH2 doub Y N 387 TRP CZ2 HZ2 sing N N 388 TRP CZ3 CH2 sing Y N 389 TRP CZ3 HZ3 sing N N 390 TRP CH2 HH2 sing N N 391 TRP OXT HXT sing N N 392 TYR N CA sing N N 393 TYR N H sing N N 394 TYR N H2 sing N N 395 TYR CA C sing N N 396 TYR CA CB sing N N 397 TYR CA HA sing N N 398 TYR C O doub N N 399 TYR C OXT sing N N 400 TYR CB CG sing N N 401 TYR CB HB2 sing N N 402 TYR CB HB3 sing N N 403 TYR CG CD1 doub Y N 404 TYR CG CD2 sing Y N 405 TYR CD1 CE1 sing Y N 406 TYR CD1 HD1 sing N N 407 TYR CD2 CE2 doub Y N 408 TYR CD2 HD2 sing N N 409 TYR CE1 CZ doub Y N 410 TYR CE1 HE1 sing N N 411 TYR CE2 CZ sing Y N 412 TYR CE2 HE2 sing N N 413 TYR CZ OH sing N N 414 TYR OH HH sing N N 415 TYR OXT HXT sing N N 416 VAL N CA sing N N 417 VAL N H sing N N 418 VAL N H2 sing N N 419 VAL CA C sing N N 420 VAL CA CB sing N N 421 VAL CA HA sing N N 422 VAL C O doub N N 423 VAL C OXT sing N N 424 VAL CB CG1 sing N N 425 VAL CB CG2 sing N N 426 VAL CB HB sing N N 427 VAL CG1 HG11 sing N N 428 VAL CG1 HG12 sing N N 429 VAL CG1 HG13 sing N N 430 VAL CG2 HG21 sing N N 431 VAL CG2 HG22 sing N N 432 VAL CG2 HG23 sing N N 433 VAL OXT HXT sing N N 434 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 C2-HYDROPEROXY-COELENTERAZINE CZH 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QV0 _pdbx_initial_refinement_model.details ? #