HEADER OXIDOREDUCTASE 21-OCT-13 4N9X TITLE CRYSTAL STRUCTURE OF THE OCTAPRENYL-METHYL-METHOXY-BENZQ MOLECULE FROM TITLE 2 ERWINA CAROTOVORA SUBSP. ATROSEPTICA STRAIN SCRI 1043 / ATCC BAA-672, TITLE 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET EWR161 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.-.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PECTOBACTERIUM ATROSEPTICUM; SOURCE 3 ORGANISM_COMMON: ERWINIA CAROTOVORA SUBSP. ATROSEPTICA; SOURCE 4 ORGANISM_TAXID: 218491; SOURCE 5 STRAIN: SCRI 1043 / ATCC BAA-672; SOURCE 6 GENE: VISC, ECA0457; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET EWR161, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.KUZIN,Y.CHEN,S.LEW,J.SEETHARAMAN,L.MAO,R.XIAO,L.A.OWENS,D.WANG, AUTHOR 2 J.K.EVERETT,T.B.ACTON,G.T.MONTELIONE,L.TONG,J.F.HUNT,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 06-DEC-23 4N9X 1 REMARK REVDAT 2 20-SEP-23 4N9X 1 SEQADV LINK REVDAT 1 20-NOV-13 4N9X 0 JRNL AUTH A.KUZIN,Y.CHEN,S.LEW,J.SEETHARAMAN,L.MAO,R.XIAO,L.A.OWENS, JRNL AUTH 2 D.WANG,J.K.EVERETT,T.B.ACTON,G.T.MONTELIONE,L.TONG,J.F.HUNT, JRNL AUTH 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) JRNL TITL CRYSTAL STRUCTURE OF THE OCTAPRENYL-METHYL-METHOXY-BENZQ JRNL TITL 2 MOLECULE FROM ERWINA CAROTOVORA SUBSP. ATROSEPTICA STRAIN JRNL TITL 3 SCRI 1043 / ATCC BAA-672, NORTHEAST STRUCTURAL GENOMICS JRNL TITL 4 CONSORTIUM (NESG) TARGET EWR161 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1269 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 26903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1310 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8130 - 5.1960 0.87 2569 140 0.2070 0.2000 REMARK 3 2 5.1960 - 4.1280 0.96 2816 155 0.1910 0.2110 REMARK 3 3 4.1280 - 3.6080 0.96 2851 128 0.2190 0.2700 REMARK 3 4 3.6080 - 3.2780 0.95 2777 139 0.2470 0.3850 REMARK 3 5 3.2780 - 3.0440 0.98 2899 148 0.2500 0.2870 REMARK 3 6 3.0440 - 2.8640 0.99 2888 165 0.2470 0.3350 REMARK 3 7 2.8640 - 2.7210 1.00 2957 150 0.2710 0.3460 REMARK 3 8 2.7210 - 2.6030 1.00 2914 147 0.2810 0.4010 REMARK 3 9 2.6030 - 2.5030 0.99 2922 138 0.2780 0.3380 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2954 REMARK 3 ANGLE : 1.450 3994 REMARK 3 CHIRALITY : 0.101 443 REMARK 3 PLANARITY : 0.006 522 REMARK 3 DIHEDRAL : 18.996 1085 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -1.2194 -22.4295 -25.1571 REMARK 3 T TENSOR REMARK 3 T11: 0.8355 T22: 0.5817 REMARK 3 T33: 0.6676 T12: -0.0274 REMARK 3 T13: 0.2631 T23: -0.1891 REMARK 3 L TENSOR REMARK 3 L11: 1.9014 L22: 1.5360 REMARK 3 L33: 1.6818 L12: 0.2218 REMARK 3 L13: -0.0553 L23: -0.0886 REMARK 3 S TENSOR REMARK 3 S11: -0.3005 S12: 0.5698 S13: -0.4400 REMARK 3 S21: -0.5658 S22: -0.0776 S23: 0.0623 REMARK 3 S31: 0.5051 S32: -0.1500 S33: 0.3317 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082936. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26980 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4K22 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5). RESERVOIR SOLUTION: 0.1M REMARK 280 AMMONIUM PHOSPHATE-DIBASIC, 0.1M TAPS, 20% (W/V) PEG4000 , VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K, PH 9 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 60.04900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.66931 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 49.97467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 60.04900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 34.66931 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 49.97467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 60.04900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 34.66931 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 49.97467 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 60.04900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 34.66931 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 49.97467 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 60.04900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 34.66931 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 49.97467 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 60.04900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 34.66931 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 49.97467 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 69.33861 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 99.94933 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 69.33861 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 99.94933 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 69.33861 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 99.94933 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 69.33861 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 99.94933 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 69.33861 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 99.94933 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 69.33861 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 99.94933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 80260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -117.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 36 REMARK 465 ALA A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 GLN A 40 REMARK 465 THR A 41 REMARK 465 LEU A 42 REMARK 465 HIS A 167 REMARK 465 SER A 168 REMARK 465 TRP A 169 REMARK 465 LEU A 170 REMARK 465 ARG A 171 REMARK 465 GLN A 172 REMARK 465 HIS A 173 REMARK 465 ALA A 174 REMARK 465 ASP A 175 REMARK 465 ILE A 176 REMARK 465 PRO A 177 REMARK 465 LEU A 178 REMARK 465 THR A 179 REMARK 465 PHE A 180 REMARK 465 TRP A 181 REMARK 465 LEU A 319 REMARK 465 GLN A 320 REMARK 465 THR A 321 REMARK 465 GLN A 322 REMARK 465 GLY A 323 REMARK 465 LEU A 399 REMARK 465 SER A 400 REMARK 465 ALA A 401 REMARK 465 GLY A 402 REMARK 465 LYS A 403 REMARK 465 LEU A 404 REMARK 465 GLU A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 465 HIS A 411 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ARG A 193 OE2 GLU A 263 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 380 N - CA - C ANGL. DEV. = -15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 -13.68 -140.67 REMARK 500 ASN A 69 -71.10 -58.66 REMARK 500 GLN A 73 -83.09 -79.30 REMARK 500 TRP A 140 99.35 -64.80 REMARK 500 ASP A 152 17.29 55.57 REMARK 500 ASP A 254 19.93 54.85 REMARK 500 ARG A 277 -3.88 178.48 REMARK 500 ARG A 283 25.69 39.29 REMARK 500 LYS A 317 92.78 -55.57 REMARK 500 ILE A 326 -32.40 65.38 REMARK 500 HIS A 329 47.82 -79.99 REMARK 500 LEU A 330 -53.38 -124.22 REMARK 500 HIS A 393 -157.76 -73.89 REMARK 500 ASP A 394 -28.50 55.31 REMARK 500 ASP A 397 71.47 59.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4K22 RELATED DB: PDB REMARK 900 HOMOLOGY IS 72.60% REMARK 900 RELATED ID: NESG-EWR161 RELATED DB: TARGETTRACK DBREF 4N9X A 1 403 UNP Q6DA06 Q6DA06_ERWCT 1 403 SEQADV 4N9X LEU A 404 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X GLU A 405 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 406 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 407 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 408 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 409 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 410 UNP Q6DA06 EXPRESSION TAG SEQADV 4N9X HIS A 411 UNP Q6DA06 EXPRESSION TAG SEQRES 1 A 411 MSE GLN SER PHE ASP VAL VAL ILE ALA GLY GLY GLY MSE SEQRES 2 A 411 VAL GLY LEU ALA LEU ALA CYS GLY LEU GLN GLY SER GLY SEQRES 3 A 411 LEU ARG ILE ALA VAL LEU GLU LYS GLN ALA ALA GLU PRO SEQRES 4 A 411 GLN THR LEU GLY LYS GLY HIS ALA LEU ARG VAL SER ALA SEQRES 5 A 411 ILE ASN ALA ALA SER GLU CYS LEU LEU ARG HIS ILE GLY SEQRES 6 A 411 VAL TRP GLU ASN LEU VAL ALA GLN ARG VAL SER PRO TYR SEQRES 7 A 411 ASN ASP MSE GLN VAL TRP ASP LYS ASP SER PHE GLY LYS SEQRES 8 A 411 ILE SER PHE SER GLY GLU GLU PHE GLY PHE SER HIS LEU SEQRES 9 A 411 GLY HIS ILE ILE GLU ASN PRO VAL ILE GLN GLN VAL LEU SEQRES 10 A 411 TRP GLN ARG ALA SER GLN LEU SER ASP ILE THR LEU LEU SEQRES 11 A 411 SER PRO THR SER LEU LYS GLN VAL ALA TRP GLY GLU ASN SEQRES 12 A 411 GLU ALA PHE ILE THR LEU GLN ASP ASP SER MSE LEU THR SEQRES 13 A 411 ALA ARG LEU VAL VAL GLY ALA ASP GLY ALA HIS SER TRP SEQRES 14 A 411 LEU ARG GLN HIS ALA ASP ILE PRO LEU THR PHE TRP ASP SEQRES 15 A 411 TYR GLY HIS HIS ALA LEU VAL ALA ASN ILE ARG THR GLU SEQRES 16 A 411 HIS PRO HIS GLN SER VAL ALA ARG GLN ALA PHE HIS GLY SEQRES 17 A 411 ASP GLY ILE LEU ALA PHE LEU PRO LEU ASP ASP PRO HIS SEQRES 18 A 411 LEU CYS SER ILE VAL TRP SER LEU SER PRO GLU GLN ALA SEQRES 19 A 411 LEU VAL MSE GLN SER LEU PRO VAL GLU GLU PHE ASN ARG SEQRES 20 A 411 GLN VAL ALA MSE ALA PHE ASP MSE ARG LEU GLY LEU CYS SEQRES 21 A 411 GLU LEU GLU SER GLU ARG GLN THR PHE PRO LEU MSE GLY SEQRES 22 A 411 ARG TYR ALA ARG SER PHE ALA ALA HIS ARG LEU VAL LEU SEQRES 23 A 411 VAL GLY ASP ALA ALA HIS THR ILE HIS PRO LEU ALA GLY SEQRES 24 A 411 GLN GLY VAL ASN LEU GLY PHE MSE ASP VAL ALA GLU LEU SEQRES 25 A 411 ILE ALA GLU LEU LYS ARG LEU GLN THR GLN GLY LYS ASP SEQRES 26 A 411 ILE GLY GLN HIS LEU TYR LEU ARG ARG TYR GLU ARG ARG SEQRES 27 A 411 ARG LYS HIS SER ALA ALA VAL MSE LEU ALA SER MSE GLN SEQRES 28 A 411 GLY PHE ARG GLU LEU PHE ASP GLY ASP ASN PRO ALA LYS SEQRES 29 A 411 LYS LEU LEU ARG ASP VAL GLY LEU VAL LEU ALA ASP LYS SEQRES 30 A 411 LEU PRO GLY ILE LYS PRO THR LEU VAL ARG GLN ALA MSE SEQRES 31 A 411 GLY LEU HIS ASP LEU PRO ASP TRP LEU SER ALA GLY LYS SEQRES 32 A 411 LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4N9X MSE A 1 MET SELENOMETHIONINE MODRES 4N9X MSE A 13 MET SELENOMETHIONINE MODRES 4N9X MSE A 81 MET SELENOMETHIONINE MODRES 4N9X MSE A 154 MET SELENOMETHIONINE MODRES 4N9X MSE A 237 MET SELENOMETHIONINE MODRES 4N9X MSE A 251 MET SELENOMETHIONINE MODRES 4N9X MSE A 255 MET SELENOMETHIONINE MODRES 4N9X MSE A 272 MET SELENOMETHIONINE MODRES 4N9X MSE A 307 MET SELENOMETHIONINE MODRES 4N9X MSE A 346 MET SELENOMETHIONINE MODRES 4N9X MSE A 350 MET SELENOMETHIONINE MODRES 4N9X MSE A 390 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 13 8 HET MSE A 81 8 HET MSE A 154 8 HET MSE A 237 8 HET MSE A 251 8 HET MSE A 255 8 HET MSE A 272 8 HET MSE A 307 8 HET MSE A 346 8 HET MSE A 350 13 HET MSE A 390 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 2 HOH *8(H2 O) HELIX 1 1 GLY A 12 CYS A 20 1 9 HELIX 2 2 ALA A 55 ILE A 64 1 10 HELIX 3 3 VAL A 66 ARG A 74 1 9 HELIX 4 4 GLU A 97 GLY A 100 5 4 HELIX 5 5 ASN A 110 SER A 122 1 13 HELIX 6 6 SER A 230 LEU A 240 1 11 HELIX 7 7 PRO A 241 ALA A 252 1 12 HELIX 8 8 ASP A 289 THR A 293 5 5 HELIX 9 9 GLN A 300 LYS A 317 1 18 HELIX 10 10 LEU A 332 ASP A 360 1 29 HELIX 11 11 ASN A 361 GLY A 371 1 11 HELIX 12 12 GLY A 380 MSE A 390 1 11 SHEET 1 A 6 ILE A 127 LEU A 130 0 SHEET 2 A 6 ILE A 29 LEU A 32 1 N VAL A 31 O LEU A 130 SHEET 3 A 6 GLN A 2 ALA A 9 1 N ILE A 8 O LEU A 32 SHEET 4 A 6 LEU A 155 GLY A 162 1 O VAL A 161 N VAL A 7 SHEET 5 A 6 LEU A 284 VAL A 287 1 O VAL A 287 N GLY A 162 SHEET 6 A 6 SER A 278 ALA A 281 -1 N PHE A 279 O LEU A 286 SHEET 1 B 3 VAL A 50 ASN A 54 0 SHEET 2 B 3 GLY A 105 GLU A 109 -1 O ILE A 108 N SER A 51 SHEET 3 B 3 SER A 76 TYR A 78 -1 O TYR A 78 N GLY A 105 SHEET 1 C 7 LYS A 91 SER A 95 0 SHEET 2 C 7 ASP A 80 ASP A 85 -1 N MSE A 81 O PHE A 94 SHEET 3 C 7 VAL A 201 HIS A 207 1 O PHE A 206 N TRP A 84 SHEET 4 C 7 GLY A 210 PRO A 216 -1 O GLY A 210 N HIS A 207 SHEET 5 C 7 LEU A 222 LEU A 229 -1 O VAL A 226 N ALA A 213 SHEET 6 C 7 HIS A 186 THR A 194 -1 N ILE A 192 O CYS A 223 SHEET 7 C 7 CYS A 260 LEU A 262 -1 O GLU A 261 N ARG A 193 SHEET 1 D 7 LYS A 91 SER A 95 0 SHEET 2 D 7 ASP A 80 ASP A 85 -1 N MSE A 81 O PHE A 94 SHEET 3 D 7 VAL A 201 HIS A 207 1 O PHE A 206 N TRP A 84 SHEET 4 D 7 GLY A 210 PRO A 216 -1 O GLY A 210 N HIS A 207 SHEET 5 D 7 LEU A 222 LEU A 229 -1 O VAL A 226 N ALA A 213 SHEET 6 D 7 HIS A 186 THR A 194 -1 N ILE A 192 O CYS A 223 SHEET 7 D 7 GLN A 267 PRO A 270 -1 O GLN A 267 N VAL A 189 SHEET 1 E 2 LEU A 135 VAL A 138 0 SHEET 2 E 2 ILE A 147 LEU A 149 -1 O THR A 148 N GLN A 137 LINK C MSE A 1 N GLN A 2 1555 1555 1.33 LINK C GLY A 12 N MSE A 13 1555 1555 1.34 LINK C MSE A 13 N VAL A 14 1555 1555 1.32 LINK C ASP A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N GLN A 82 1555 1555 1.33 LINK C SER A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N LEU A 155 1555 1555 1.33 LINK C VAL A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N GLN A 238 1555 1555 1.33 LINK C ALA A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N ALA A 252 1555 1555 1.33 LINK C ASP A 254 N MSE A 255 1555 1555 1.33 LINK C MSE A 255 N ARG A 256 1555 1555 1.33 LINK C LEU A 271 N MSE A 272 1555 1555 1.33 LINK C MSE A 272 N GLY A 273 1555 1555 1.33 LINK C PHE A 306 N MSE A 307 1555 1555 1.32 LINK C MSE A 307 N ASP A 308 1555 1555 1.33 LINK C VAL A 345 N MSE A 346 1555 1555 1.34 LINK C MSE A 346 N LEU A 347 1555 1555 1.32 LINK C SER A 349 N MSE A 350 1555 1555 1.33 LINK C MSE A 350 N GLN A 351 1555 1555 1.32 LINK C ALA A 389 N MSE A 390 1555 1555 1.32 LINK C MSE A 390 N GLY A 391 1555 1555 1.33 CISPEP 1 SER A 131 PRO A 132 0 -7.31 CISPEP 2 GLY A 273 ARG A 274 0 25.06 CISPEP 3 PRO A 379 GLY A 380 0 -20.06 CISPEP 4 ASP A 397 TRP A 398 0 -8.96 CRYST1 120.098 120.098 149.924 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008327 0.004807 0.000000 0.00000 SCALE2 0.000000 0.009615 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006670 0.00000 HETATM 1 N MSE A 1 -8.905 -13.622 -60.374 1.00143.17 N ANISOU 1 N MSE A 1 23032 23157 8210 -2463 -908 -1932 N HETATM 2 CA MSE A 1 -8.150 -14.027 -59.197 1.00139.79 C ANISOU 2 CA MSE A 1 22523 22456 8135 -2388 -585 -2018 C HETATM 3 C MSE A 1 -8.161 -15.538 -59.040 1.00140.48 C ANISOU 3 C MSE A 1 22666 22402 8307 -2423 -379 -2476 C HETATM 4 O MSE A 1 -8.351 -16.288 -60.001 1.00143.10 O ANISOU 4 O MSE A 1 23120 22831 8421 -2461 -382 -2703 O HETATM 5 CB MSE A 1 -8.750 -13.422 -57.915 1.00134.10 C ANISOU 5 CB MSE A 1 21513 21491 7946 -2289 -768 -1846 C HETATM 6 CG MSE A 1 -9.529 -12.124 -58.077 1.00134.00 C ANISOU 6 CG MSE A 1 21392 21591 7929 -2271 -1163 -1493 C HETATM 7 SE MSE A 1 -11.374 -12.345 -58.681 1.00241.91 SE ANISOU 7 SE MSE A 1 35021 35463 21431 -2418 -1679 -1659 SE HETATM 8 CE MSE A 1 -11.773 -14.069 -57.867 1.00187.54 C ANISOU 8 CE MSE A 1 28076 28345 14837 -2491 -1507 -2200 C