data_4NCD # _entry.id 4NCD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NCD RCSB RCSB083024 WWPDB D_1000083024 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NCD _pdbx_database_status.recvd_initial_deposition_date 2013-10-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bao, R.' 1 'Xia, D.' 2 # _citation.id primary _citation.title 'Structure of CfaA Suggests a New Family of Chaperones Essential for Assembly of Class 5 Fimbriae.' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 10 _citation.page_first e1004316 _citation.page_last e1004316 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25122114 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1004316 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bao, R.' 1 primary 'Fordyce, A.' 2 primary 'Chen, Y.X.' 3 primary 'McVeigh, A.' 4 primary 'Savarino, S.J.' 5 primary 'Xia, D.' 6 # _cell.entry_id 4NCD _cell.length_a 102.606 _cell.length_b 28.582 _cell.length_c 90.716 _cell.angle_alpha 90.00 _cell.angle_beta 118.89 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NCD _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Gram-negative pili assembly chaperone, N-terminal domain protein' 28329.703 1 ? ? ? ? 2 water nat water 18.015 120 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHKLFYLLSLLMAPFVANANFMIYPISKDLKNGNSELVRVYSKSKEIQYIKIYTKKIINPGTTEEYEVDIPNWDGGLVVT PQKVILPAGASKSIRLTQFKIPKKEEVYRVYFEAVKPDSKENVIDNKKLTTELSVNIIYAALIRSLPSEQNISLNISRNA KKNIIIYNNGNVRAGVKDIYFCKSSNIDDNCVKKAYNKNIYPEKSFDTLVNNNFSYVFIKLNHEGIEKEQGLIQLKVPLE HHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MHKLFYLLSLLMAPFVANANFMIYPISKDLKNGNSELVRVYSKSKEIQYIKIYTKKIINPGTTEEYEVDIPNWDGGLVVT PQKVILPAGASKSIRLTQFKIPKKEEVYRVYFEAVKPDSKENVIDNKKLTTELSVNIIYAALIRSLPSEQNISLNISRNA KKNIIIYNNGNVRAGVKDIYFCKSSNIDDNCVKKAYNKNIYPEKSFDTLVNNNFSYVFIKLNHEGIEKEQGLIQLKVPLE HHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 LYS n 1 4 LEU n 1 5 PHE n 1 6 TYR n 1 7 LEU n 1 8 LEU n 1 9 SER n 1 10 LEU n 1 11 LEU n 1 12 MET n 1 13 ALA n 1 14 PRO n 1 15 PHE n 1 16 VAL n 1 17 ALA n 1 18 ASN n 1 19 ALA n 1 20 ASN n 1 21 PHE n 1 22 MET n 1 23 ILE n 1 24 TYR n 1 25 PRO n 1 26 ILE n 1 27 SER n 1 28 LYS n 1 29 ASP n 1 30 LEU n 1 31 LYS n 1 32 ASN n 1 33 GLY n 1 34 ASN n 1 35 SER n 1 36 GLU n 1 37 LEU n 1 38 VAL n 1 39 ARG n 1 40 VAL n 1 41 TYR n 1 42 SER n 1 43 LYS n 1 44 SER n 1 45 LYS n 1 46 GLU n 1 47 ILE n 1 48 GLN n 1 49 TYR n 1 50 ILE n 1 51 LYS n 1 52 ILE n 1 53 TYR n 1 54 THR n 1 55 LYS n 1 56 LYS n 1 57 ILE n 1 58 ILE n 1 59 ASN n 1 60 PRO n 1 61 GLY n 1 62 THR n 1 63 THR n 1 64 GLU n 1 65 GLU n 1 66 TYR n 1 67 GLU n 1 68 VAL n 1 69 ASP n 1 70 ILE n 1 71 PRO n 1 72 ASN n 1 73 TRP n 1 74 ASP n 1 75 GLY n 1 76 GLY n 1 77 LEU n 1 78 VAL n 1 79 VAL n 1 80 THR n 1 81 PRO n 1 82 GLN n 1 83 LYS n 1 84 VAL n 1 85 ILE n 1 86 LEU n 1 87 PRO n 1 88 ALA n 1 89 GLY n 1 90 ALA n 1 91 SER n 1 92 LYS n 1 93 SER n 1 94 ILE n 1 95 ARG n 1 96 LEU n 1 97 THR n 1 98 GLN n 1 99 PHE n 1 100 LYS n 1 101 ILE n 1 102 PRO n 1 103 LYS n 1 104 LYS n 1 105 GLU n 1 106 GLU n 1 107 VAL n 1 108 TYR n 1 109 ARG n 1 110 VAL n 1 111 TYR n 1 112 PHE n 1 113 GLU n 1 114 ALA n 1 115 VAL n 1 116 LYS n 1 117 PRO n 1 118 ASP n 1 119 SER n 1 120 LYS n 1 121 GLU n 1 122 ASN n 1 123 VAL n 1 124 ILE n 1 125 ASP n 1 126 ASN n 1 127 LYS n 1 128 LYS n 1 129 LEU n 1 130 THR n 1 131 THR n 1 132 GLU n 1 133 LEU n 1 134 SER n 1 135 VAL n 1 136 ASN n 1 137 ILE n 1 138 ILE n 1 139 TYR n 1 140 ALA n 1 141 ALA n 1 142 LEU n 1 143 ILE n 1 144 ARG n 1 145 SER n 1 146 LEU n 1 147 PRO n 1 148 SER n 1 149 GLU n 1 150 GLN n 1 151 ASN n 1 152 ILE n 1 153 SER n 1 154 LEU n 1 155 ASN n 1 156 ILE n 1 157 SER n 1 158 ARG n 1 159 ASN n 1 160 ALA n 1 161 LYS n 1 162 LYS n 1 163 ASN n 1 164 ILE n 1 165 ILE n 1 166 ILE n 1 167 TYR n 1 168 ASN n 1 169 ASN n 1 170 GLY n 1 171 ASN n 1 172 VAL n 1 173 ARG n 1 174 ALA n 1 175 GLY n 1 176 VAL n 1 177 LYS n 1 178 ASP n 1 179 ILE n 1 180 TYR n 1 181 PHE n 1 182 CYS n 1 183 LYS n 1 184 SER n 1 185 SER n 1 186 ASN n 1 187 ILE n 1 188 ASP n 1 189 ASP n 1 190 ASN n 1 191 CYS n 1 192 VAL n 1 193 LYS n 1 194 LYS n 1 195 ALA n 1 196 TYR n 1 197 ASN n 1 198 LYS n 1 199 ASN n 1 200 ILE n 1 201 TYR n 1 202 PRO n 1 203 GLU n 1 204 LYS n 1 205 SER n 1 206 PHE n 1 207 ASP n 1 208 THR n 1 209 LEU n 1 210 VAL n 1 211 ASN n 1 212 ASN n 1 213 ASN n 1 214 PHE n 1 215 SER n 1 216 TYR n 1 217 VAL n 1 218 PHE n 1 219 ILE n 1 220 LYS n 1 221 LEU n 1 222 ASN n 1 223 HIS n 1 224 GLU n 1 225 GLY n 1 226 ILE n 1 227 GLU n 1 228 LYS n 1 229 GLU n 1 230 GLN n 1 231 GLY n 1 232 LEU n 1 233 ILE n 1 234 GLN n 1 235 LEU n 1 236 LYS n 1 237 VAL n 1 238 PRO n 1 239 LEU n 1 240 GLU n 1 241 HIS n 1 242 HIS n 1 243 HIS n 1 244 HIS n 1 245 HIS n 1 246 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ECP03018675_4907 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1116069 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code N4NNE0_ECOLX _struct_ref.pdbx_db_accession N4NNE0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHKLFYLLSLLMAPFVANANFMIYPISKDLKNGNSELVRVYSKSKEIQYIKIYTKKIINPGTTEEYEVDIPNWDGGLVVT PQKVILPAGASKSIRLTQFKIPKKEEVYRVYFEAVKPDSKENVIDNKKLTTELSVNIIYAALIRSLPSEQNISLNISRNA KKNIIIYNNGNVRAGVKDIYFCKSSNIDDNCVKKAYNKNIYPEKSFDTLVNNNFSYVFIKLNHEGIEKEQGLIQLKVP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NCD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 238 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession N4NNE0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -18 _struct_ref_seq.pdbx_auth_seq_align_end 219 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NCD LEU A 239 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 220 1 1 4NCD GLU A 240 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 221 2 1 4NCD HIS A 241 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 222 3 1 4NCD HIS A 242 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 223 4 1 4NCD HIS A 243 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 224 5 1 4NCD HIS A 244 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 225 6 1 4NCD HIS A 245 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 226 7 1 4NCD HIS A 246 ? UNP N4NNE0 ? ? 'EXPRESSION TAG' 227 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NCD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.3 _exptl_crystal_grow.pdbx_details '22% PEG3350, 0.2 M NaCl, 0.1 M MES pH 5.3, EVAPORATION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'APS BM22' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 4NCD _reflns.observed_criterion_sigma_I -1 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.03 _reflns.number_obs 15399 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.03 _reflns_shell.d_res_low 2.08 _reflns_shell.percent_possible_all 72.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NCD _refine.ls_number_reflns_obs 27884 _refine.ls_number_reflns_all 28845 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.715 _refine.ls_d_res_high 2.037 _refine.ls_percent_reflns_obs 96.67 _refine.ls_R_factor_obs 0.2213 _refine.ls_R_factor_all 0.2213 _refine.ls_R_factor_R_work 0.2174 _refine.ls_R_factor_R_free 0.2564 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.03 _refine.ls_number_reflns_R_free 2797 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.27 _refine.pdbx_overall_phase_error 26.48 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1698 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 1818 _refine_hist.d_res_high 2.037 _refine_hist.d_res_low 39.715 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.012 ? ? 1735 ? 'X-RAY DIFFRACTION' f_angle_d 1.364 ? ? 2345 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.125 ? ? 666 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.095 ? ? 267 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 297 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.0370 2.1098 2266 0.3181 88.00 0.3564 . . 243 . . . . 'X-RAY DIFFRACTION' . 2.1098 2.1942 2491 0.2611 94.00 0.3262 . . 280 . . . . 'X-RAY DIFFRACTION' . 2.1942 2.2941 2440 0.3281 96.00 0.4053 . . 271 . . . . 'X-RAY DIFFRACTION' . 2.2941 2.4150 2538 0.2478 97.00 0.2673 . . 286 . . . . 'X-RAY DIFFRACTION' . 2.4150 2.5663 2584 0.2130 99.00 0.2393 . . 293 . . . . 'X-RAY DIFFRACTION' . 2.5663 2.7644 2514 0.2116 98.00 0.3105 . . 278 . . . . 'X-RAY DIFFRACTION' . 2.7644 3.0425 2587 0.2174 99.00 0.2567 . . 289 . . . . 'X-RAY DIFFRACTION' . 3.0425 3.4826 2578 0.2029 99.00 0.2282 . . 281 . . . . 'X-RAY DIFFRACTION' . 3.4826 4.3868 2543 0.1896 98.00 0.2174 . . 287 . . . . 'X-RAY DIFFRACTION' . 4.3868 39.7222 2546 0.2016 97.00 0.2374 . . 289 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4NCD _struct.title 'Crystal Structure of Class 5 Fimbriae Chaperone CfaA' _struct.pdbx_descriptor 'Gram-negative pili assembly chaperone, N-terminal domain protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NCD _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text 'immunoglobulin fold, chaperone' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 182 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 191 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 163 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 172 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.925 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 24 A . ? TYR 5 A PRO 25 A ? PRO 6 A 1 -4.47 2 THR 80 A . ? THR 61 A PRO 81 A ? PRO 62 A 1 -4.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 5 ? D ? 3 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 21 ? TYR A 24 ? PHE A 2 TYR A 5 A 2 GLU A 36 ? SER A 42 ? GLU A 17 SER A 23 A 3 SER A 91 ? GLN A 98 ? SER A 72 GLN A 79 A 4 LEU A 77 ? THR A 80 ? LEU A 58 THR A 61 B 1 SER A 27 ? LEU A 30 ? SER A 8 LEU A 11 B 2 ILE A 138 ? SER A 145 ? ILE A 119 SER A 126 B 3 GLU A 106 ? VAL A 115 ? GLU A 87 VAL A 96 B 4 GLN A 48 ? ILE A 58 ? GLN A 29 ILE A 39 B 5 TYR A 66 ? ILE A 70 ? TYR A 47 ILE A 51 C 1 SER A 27 ? LEU A 30 ? SER A 8 LEU A 11 C 2 ILE A 138 ? SER A 145 ? ILE A 119 SER A 126 C 3 GLU A 106 ? VAL A 115 ? GLU A 87 VAL A 96 C 4 GLN A 48 ? ILE A 58 ? GLN A 29 ILE A 39 C 5 LYS A 83 ? LEU A 86 ? LYS A 64 LEU A 67 D 1 LEU A 154 ? SER A 157 ? LEU A 135 SER A 138 D 2 ILE A 165 ? ASN A 168 ? ILE A 146 ASN A 149 D 3 SER A 205 ? ASP A 207 ? SER A 186 ASP A 188 E 1 VAL A 192 ? ILE A 200 ? VAL A 173 ILE A 181 E 2 ALA A 174 ? CYS A 182 ? ALA A 155 CYS A 163 E 3 TYR A 216 ? LEU A 221 ? TYR A 197 LEU A 202 E 4 GLY A 231 ? LEU A 235 ? GLY A 212 LEU A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 24 ? N TYR A 5 O ARG A 39 ? O ARG A 20 A 2 3 N VAL A 40 ? N VAL A 21 O LYS A 92 ? O LYS A 73 A 3 4 O ARG A 95 ? O ARG A 76 N THR A 80 ? N THR A 61 B 1 2 N LEU A 30 ? N LEU A 11 O ARG A 144 ? O ARG A 125 B 2 3 O SER A 145 ? O SER A 126 N GLU A 106 ? N GLU A 87 B 3 4 O VAL A 115 ? O VAL A 96 N TYR A 49 ? N TYR A 30 B 4 5 N ILE A 58 ? N ILE A 39 O TYR A 66 ? O TYR A 47 C 1 2 N LEU A 30 ? N LEU A 11 O ARG A 144 ? O ARG A 125 C 2 3 O SER A 145 ? O SER A 126 N GLU A 106 ? N GLU A 87 C 3 4 O VAL A 115 ? O VAL A 96 N TYR A 49 ? N TYR A 30 C 4 5 N GLN A 48 ? N GLN A 29 O LEU A 86 ? O LEU A 67 D 1 2 N SER A 157 ? N SER A 138 O ILE A 165 ? O ILE A 146 D 2 3 N ILE A 166 ? N ILE A 147 O PHE A 206 ? O PHE A 187 E 1 2 O TYR A 196 ? O TYR A 177 N LYS A 177 ? N LYS A 158 E 2 3 N LYS A 177 ? N LYS A 158 O LYS A 220 ? O LYS A 201 E 3 4 N ILE A 219 ? N ILE A 200 O LEU A 232 ? O LEU A 213 # _database_PDB_matrix.entry_id 4NCD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NCD _atom_sites.fract_transf_matrix[1][1] 0.009746 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005378 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034987 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012590 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -18 ? ? ? A . n A 1 2 HIS 2 -17 ? ? ? A . n A 1 3 LYS 3 -16 ? ? ? A . n A 1 4 LEU 4 -15 ? ? ? A . n A 1 5 PHE 5 -14 ? ? ? A . n A 1 6 TYR 6 -13 ? ? ? A . n A 1 7 LEU 7 -12 ? ? ? A . n A 1 8 LEU 8 -11 ? ? ? A . n A 1 9 SER 9 -10 ? ? ? A . n A 1 10 LEU 10 -9 ? ? ? A . n A 1 11 LEU 11 -8 ? ? ? A . n A 1 12 MET 12 -7 ? ? ? A . n A 1 13 ALA 13 -6 ? ? ? A . n A 1 14 PRO 14 -5 ? ? ? A . n A 1 15 PHE 15 -4 ? ? ? A . n A 1 16 VAL 16 -3 ? ? ? A . n A 1 17 ALA 17 -2 ? ? ? A . n A 1 18 ASN 18 -1 ? ? ? A . n A 1 19 ALA 19 0 ? ? ? A . n A 1 20 ASN 20 1 1 ASN ASN A . n A 1 21 PHE 21 2 2 PHE PHE A . n A 1 22 MET 22 3 3 MET MET A . n A 1 23 ILE 23 4 4 ILE ILE A . n A 1 24 TYR 24 5 5 TYR TYR A . n A 1 25 PRO 25 6 6 PRO PRO A . n A 1 26 ILE 26 7 7 ILE ILE A . n A 1 27 SER 27 8 8 SER SER A . n A 1 28 LYS 28 9 9 LYS LYS A . n A 1 29 ASP 29 10 10 ASP ASP A . n A 1 30 LEU 30 11 11 LEU LEU A . n A 1 31 LYS 31 12 12 LYS LYS A . n A 1 32 ASN 32 13 13 ASN ASN A . n A 1 33 GLY 33 14 14 GLY GLY A . n A 1 34 ASN 34 15 15 ASN ASN A . n A 1 35 SER 35 16 16 SER SER A . n A 1 36 GLU 36 17 17 GLU GLU A . n A 1 37 LEU 37 18 18 LEU LEU A . n A 1 38 VAL 38 19 19 VAL VAL A . n A 1 39 ARG 39 20 20 ARG ARG A . n A 1 40 VAL 40 21 21 VAL VAL A . n A 1 41 TYR 41 22 22 TYR TYR A . n A 1 42 SER 42 23 23 SER SER A . n A 1 43 LYS 43 24 24 LYS LYS A . n A 1 44 SER 44 25 25 SER SER A . n A 1 45 LYS 45 26 26 LYS LYS A . n A 1 46 GLU 46 27 27 GLU GLU A . n A 1 47 ILE 47 28 28 ILE ILE A . n A 1 48 GLN 48 29 29 GLN GLN A . n A 1 49 TYR 49 30 30 TYR TYR A . n A 1 50 ILE 50 31 31 ILE ILE A . n A 1 51 LYS 51 32 32 LYS LYS A . n A 1 52 ILE 52 33 33 ILE ILE A . n A 1 53 TYR 53 34 34 TYR TYR A . n A 1 54 THR 54 35 35 THR THR A . n A 1 55 LYS 55 36 36 LYS LYS A . n A 1 56 LYS 56 37 37 LYS LYS A . n A 1 57 ILE 57 38 38 ILE ILE A . n A 1 58 ILE 58 39 39 ILE ILE A . n A 1 59 ASN 59 40 40 ASN ASN A . n A 1 60 PRO 60 41 41 PRO PRO A . n A 1 61 GLY 61 42 42 GLY GLY A . n A 1 62 THR 62 43 43 THR THR A . n A 1 63 THR 63 44 44 THR THR A . n A 1 64 GLU 64 45 45 GLU GLU A . n A 1 65 GLU 65 46 46 GLU GLU A . n A 1 66 TYR 66 47 47 TYR TYR A . n A 1 67 GLU 67 48 48 GLU GLU A . n A 1 68 VAL 68 49 49 VAL VAL A . n A 1 69 ASP 69 50 50 ASP ASP A . n A 1 70 ILE 70 51 51 ILE ILE A . n A 1 71 PRO 71 52 52 PRO PRO A . n A 1 72 ASN 72 53 53 ASN ASN A . n A 1 73 TRP 73 54 54 TRP TRP A . n A 1 74 ASP 74 55 55 ASP ASP A . n A 1 75 GLY 75 56 56 GLY GLY A . n A 1 76 GLY 76 57 57 GLY GLY A . n A 1 77 LEU 77 58 58 LEU LEU A . n A 1 78 VAL 78 59 59 VAL VAL A . n A 1 79 VAL 79 60 60 VAL VAL A . n A 1 80 THR 80 61 61 THR THR A . n A 1 81 PRO 81 62 62 PRO PRO A . n A 1 82 GLN 82 63 63 GLN GLN A . n A 1 83 LYS 83 64 64 LYS LYS A . n A 1 84 VAL 84 65 65 VAL VAL A . n A 1 85 ILE 85 66 66 ILE ILE A . n A 1 86 LEU 86 67 67 LEU LEU A . n A 1 87 PRO 87 68 68 PRO PRO A . n A 1 88 ALA 88 69 69 ALA ALA A . n A 1 89 GLY 89 70 70 GLY GLY A . n A 1 90 ALA 90 71 71 ALA ALA A . n A 1 91 SER 91 72 72 SER SER A . n A 1 92 LYS 92 73 73 LYS LYS A . n A 1 93 SER 93 74 74 SER SER A . n A 1 94 ILE 94 75 75 ILE ILE A . n A 1 95 ARG 95 76 76 ARG ARG A . n A 1 96 LEU 96 77 77 LEU LEU A . n A 1 97 THR 97 78 78 THR THR A . n A 1 98 GLN 98 79 79 GLN GLN A . n A 1 99 PHE 99 80 80 PHE PHE A . n A 1 100 LYS 100 81 81 LYS LYS A . n A 1 101 ILE 101 82 82 ILE ILE A . n A 1 102 PRO 102 83 83 PRO PRO A . n A 1 103 LYS 103 84 84 LYS LYS A . n A 1 104 LYS 104 85 85 LYS LYS A . n A 1 105 GLU 105 86 86 GLU GLU A . n A 1 106 GLU 106 87 87 GLU GLU A . n A 1 107 VAL 107 88 88 VAL VAL A . n A 1 108 TYR 108 89 89 TYR TYR A . n A 1 109 ARG 109 90 90 ARG ARG A . n A 1 110 VAL 110 91 91 VAL VAL A . n A 1 111 TYR 111 92 92 TYR TYR A . n A 1 112 PHE 112 93 93 PHE PHE A . n A 1 113 GLU 113 94 94 GLU GLU A . n A 1 114 ALA 114 95 95 ALA ALA A . n A 1 115 VAL 115 96 96 VAL VAL A . n A 1 116 LYS 116 97 97 LYS LYS A . n A 1 117 PRO 117 98 98 PRO PRO A . n A 1 118 ASP 118 99 99 ASP ASP A . n A 1 119 SER 119 100 100 SER SER A . n A 1 120 LYS 120 101 ? ? ? A . n A 1 121 GLU 121 102 ? ? ? A . n A 1 122 ASN 122 103 ? ? ? A . n A 1 123 VAL 123 104 ? ? ? A . n A 1 124 ILE 124 105 ? ? ? A . n A 1 125 ASP 125 106 ? ? ? A . n A 1 126 ASN 126 107 ? ? ? A . n A 1 127 LYS 127 108 ? ? ? A . n A 1 128 LYS 128 109 ? ? ? A . n A 1 129 LEU 129 110 110 LEU LEU A . n A 1 130 THR 130 111 111 THR THR A . n A 1 131 THR 131 112 112 THR THR A . n A 1 132 GLU 132 113 113 GLU GLU A . n A 1 133 LEU 133 114 114 LEU LEU A . n A 1 134 SER 134 115 115 SER SER A . n A 1 135 VAL 135 116 116 VAL VAL A . n A 1 136 ASN 136 117 117 ASN ASN A . n A 1 137 ILE 137 118 118 ILE ILE A . n A 1 138 ILE 138 119 119 ILE ILE A . n A 1 139 TYR 139 120 120 TYR TYR A . n A 1 140 ALA 140 121 121 ALA ALA A . n A 1 141 ALA 141 122 122 ALA ALA A . n A 1 142 LEU 142 123 123 LEU LEU A . n A 1 143 ILE 143 124 124 ILE ILE A . n A 1 144 ARG 144 125 125 ARG ARG A . n A 1 145 SER 145 126 126 SER SER A . n A 1 146 LEU 146 127 127 LEU LEU A . n A 1 147 PRO 147 128 128 PRO PRO A . n A 1 148 SER 148 129 129 SER SER A . n A 1 149 GLU 149 130 130 GLU GLU A . n A 1 150 GLN 150 131 131 GLN GLN A . n A 1 151 ASN 151 132 132 ASN ASN A . n A 1 152 ILE 152 133 133 ILE ILE A . n A 1 153 SER 153 134 134 SER SER A . n A 1 154 LEU 154 135 135 LEU LEU A . n A 1 155 ASN 155 136 136 ASN ASN A . n A 1 156 ILE 156 137 137 ILE ILE A . n A 1 157 SER 157 138 138 SER SER A . n A 1 158 ARG 158 139 139 ARG ARG A . n A 1 159 ASN 159 140 140 ASN ASN A . n A 1 160 ALA 160 141 141 ALA ALA A . n A 1 161 LYS 161 142 142 LYS LYS A . n A 1 162 LYS 162 143 143 LYS LYS A . n A 1 163 ASN 163 144 144 ASN ASN A . n A 1 164 ILE 164 145 145 ILE ILE A . n A 1 165 ILE 165 146 146 ILE ILE A . n A 1 166 ILE 166 147 147 ILE ILE A . n A 1 167 TYR 167 148 148 TYR TYR A . n A 1 168 ASN 168 149 149 ASN ASN A . n A 1 169 ASN 169 150 150 ASN ASN A . n A 1 170 GLY 170 151 151 GLY GLY A . n A 1 171 ASN 171 152 152 ASN ASN A . n A 1 172 VAL 172 153 153 VAL VAL A . n A 1 173 ARG 173 154 154 ARG ARG A . n A 1 174 ALA 174 155 155 ALA ALA A . n A 1 175 GLY 175 156 156 GLY GLY A . n A 1 176 VAL 176 157 157 VAL VAL A . n A 1 177 LYS 177 158 158 LYS LYS A . n A 1 178 ASP 178 159 159 ASP ASP A . n A 1 179 ILE 179 160 160 ILE ILE A . n A 1 180 TYR 180 161 161 TYR TYR A . n A 1 181 PHE 181 162 162 PHE PHE A . n A 1 182 CYS 182 163 163 CYS CYS A . n A 1 183 LYS 183 164 164 LYS LYS A . n A 1 184 SER 184 165 165 SER SER A . n A 1 185 SER 185 166 166 SER SER A . n A 1 186 ASN 186 167 167 ASN ASN A . n A 1 187 ILE 187 168 168 ILE ILE A . n A 1 188 ASP 188 169 169 ASP ASP A . n A 1 189 ASP 189 170 170 ASP ASP A . n A 1 190 ASN 190 171 171 ASN ASN A . n A 1 191 CYS 191 172 172 CYS CYS A . n A 1 192 VAL 192 173 173 VAL VAL A . n A 1 193 LYS 193 174 174 LYS LYS A . n A 1 194 LYS 194 175 175 LYS LYS A . n A 1 195 ALA 195 176 176 ALA ALA A . n A 1 196 TYR 196 177 177 TYR TYR A . n A 1 197 ASN 197 178 178 ASN ASN A . n A 1 198 LYS 198 179 179 LYS LYS A . n A 1 199 ASN 199 180 180 ASN ASN A . n A 1 200 ILE 200 181 181 ILE ILE A . n A 1 201 TYR 201 182 182 TYR TYR A . n A 1 202 PRO 202 183 183 PRO PRO A . n A 1 203 GLU 203 184 184 GLU GLU A . n A 1 204 LYS 204 185 185 LYS LYS A . n A 1 205 SER 205 186 186 SER SER A . n A 1 206 PHE 206 187 187 PHE PHE A . n A 1 207 ASP 207 188 188 ASP ASP A . n A 1 208 THR 208 189 189 THR THR A . n A 1 209 LEU 209 190 190 LEU LEU A . n A 1 210 VAL 210 191 191 VAL VAL A . n A 1 211 ASN 211 192 192 ASN ASN A . n A 1 212 ASN 212 193 193 ASN ASN A . n A 1 213 ASN 213 194 194 ASN ASN A . n A 1 214 PHE 214 195 195 PHE PHE A . n A 1 215 SER 215 196 196 SER SER A . n A 1 216 TYR 216 197 197 TYR TYR A . n A 1 217 VAL 217 198 198 VAL VAL A . n A 1 218 PHE 218 199 199 PHE PHE A . n A 1 219 ILE 219 200 200 ILE ILE A . n A 1 220 LYS 220 201 201 LYS LYS A . n A 1 221 LEU 221 202 202 LEU LEU A . n A 1 222 ASN 222 203 203 ASN ASN A . n A 1 223 HIS 223 204 204 HIS HIS A . n A 1 224 GLU 224 205 205 GLU GLU A . n A 1 225 GLY 225 206 206 GLY GLY A . n A 1 226 ILE 226 207 207 ILE ILE A . n A 1 227 GLU 227 208 208 GLU GLU A . n A 1 228 LYS 228 209 209 LYS LYS A . n A 1 229 GLU 229 210 210 GLU GLU A . n A 1 230 GLN 230 211 211 GLN GLN A . n A 1 231 GLY 231 212 212 GLY GLY A . n A 1 232 LEU 232 213 213 LEU LEU A . n A 1 233 ILE 233 214 214 ILE ILE A . n A 1 234 GLN 234 215 215 GLN GLN A . n A 1 235 LEU 235 216 216 LEU LEU A . n A 1 236 LYS 236 217 217 LYS LYS A . n A 1 237 VAL 237 218 218 VAL VAL A . n A 1 238 PRO 238 219 219 PRO PRO A . n A 1 239 LEU 239 220 220 LEU ALA A . n A 1 240 GLU 240 221 ? ? ? A . n A 1 241 HIS 241 222 ? ? ? A . n A 1 242 HIS 242 223 ? ? ? A . n A 1 243 HIS 243 224 ? ? ? A . n A 1 244 HIS 244 225 ? ? ? A . n A 1 245 HIS 245 226 ? ? ? A . n A 1 246 HIS 246 227 ? ? ? A . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B 2 1 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-08-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SHARP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH2 A ARG 154 ? ? OE1 A GLU 205 ? ? 1.93 2 1 O A ILE 118 ? ? O A HOH 387 ? ? 1.99 3 1 O A PHE 80 ? ? O A HOH 308 ? ? 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 207 ? ? 83.03 0.93 2 1 LYS A 209 ? ? -105.62 -70.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 220 ? CG ? A LEU 239 CG 2 1 Y 1 A LEU 220 ? CD1 ? A LEU 239 CD1 3 1 Y 1 A LEU 220 ? CD2 ? A LEU 239 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? A MET 1 2 1 Y 1 A HIS -17 ? A HIS 2 3 1 Y 1 A LYS -16 ? A LYS 3 4 1 Y 1 A LEU -15 ? A LEU 4 5 1 Y 1 A PHE -14 ? A PHE 5 6 1 Y 1 A TYR -13 ? A TYR 6 7 1 Y 1 A LEU -12 ? A LEU 7 8 1 Y 1 A LEU -11 ? A LEU 8 9 1 Y 1 A SER -10 ? A SER 9 10 1 Y 1 A LEU -9 ? A LEU 10 11 1 Y 1 A LEU -8 ? A LEU 11 12 1 Y 1 A MET -7 ? A MET 12 13 1 Y 1 A ALA -6 ? A ALA 13 14 1 Y 1 A PRO -5 ? A PRO 14 15 1 Y 1 A PHE -4 ? A PHE 15 16 1 Y 1 A VAL -3 ? A VAL 16 17 1 Y 1 A ALA -2 ? A ALA 17 18 1 Y 1 A ASN -1 ? A ASN 18 19 1 Y 1 A ALA 0 ? A ALA 19 20 1 Y 1 A LYS 101 ? A LYS 120 21 1 Y 1 A GLU 102 ? A GLU 121 22 1 Y 1 A ASN 103 ? A ASN 122 23 1 Y 1 A VAL 104 ? A VAL 123 24 1 Y 1 A ILE 105 ? A ILE 124 25 1 Y 1 A ASP 106 ? A ASP 125 26 1 Y 1 A ASN 107 ? A ASN 126 27 1 Y 1 A LYS 108 ? A LYS 127 28 1 Y 1 A LYS 109 ? A LYS 128 29 1 Y 1 A GLU 221 ? A GLU 240 30 1 Y 1 A HIS 222 ? A HIS 241 31 1 Y 1 A HIS 223 ? A HIS 242 32 1 Y 1 A HIS 224 ? A HIS 243 33 1 Y 1 A HIS 225 ? A HIS 244 34 1 Y 1 A HIS 226 ? A HIS 245 35 1 Y 1 A HIS 227 ? A HIS 246 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . B 2 HOH 8 308 8 HOH HOH A . B 2 HOH 9 309 9 HOH HOH A . B 2 HOH 10 310 10 HOH HOH A . B 2 HOH 11 311 11 HOH HOH A . B 2 HOH 12 312 12 HOH HOH A . B 2 HOH 13 313 13 HOH HOH A . B 2 HOH 14 314 14 HOH HOH A . B 2 HOH 15 315 15 HOH HOH A . B 2 HOH 16 316 16 HOH HOH A . B 2 HOH 17 317 17 HOH HOH A . B 2 HOH 18 318 18 HOH HOH A . B 2 HOH 19 319 19 HOH HOH A . B 2 HOH 20 320 20 HOH HOH A . B 2 HOH 21 321 21 HOH HOH A . B 2 HOH 22 322 22 HOH HOH A . B 2 HOH 23 323 23 HOH HOH A . B 2 HOH 24 324 24 HOH HOH A . B 2 HOH 25 325 25 HOH HOH A . B 2 HOH 26 326 26 HOH HOH A . B 2 HOH 27 327 27 HOH HOH A . B 2 HOH 28 328 28 HOH HOH A . B 2 HOH 29 329 29 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 31 HOH HOH A . B 2 HOH 32 332 32 HOH HOH A . B 2 HOH 33 333 33 HOH HOH A . B 2 HOH 34 334 34 HOH HOH A . B 2 HOH 35 335 35 HOH HOH A . B 2 HOH 36 336 36 HOH HOH A . B 2 HOH 37 337 37 HOH HOH A . B 2 HOH 38 338 38 HOH HOH A . B 2 HOH 39 339 39 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 41 HOH HOH A . B 2 HOH 42 342 42 HOH HOH A . B 2 HOH 43 343 43 HOH HOH A . B 2 HOH 44 344 44 HOH HOH A . B 2 HOH 45 345 45 HOH HOH A . B 2 HOH 46 346 46 HOH HOH A . B 2 HOH 47 347 47 HOH HOH A . B 2 HOH 48 348 48 HOH HOH A . B 2 HOH 49 349 49 HOH HOH A . B 2 HOH 50 350 50 HOH HOH A . B 2 HOH 51 351 51 HOH HOH A . B 2 HOH 52 352 52 HOH HOH A . B 2 HOH 53 353 53 HOH HOH A . B 2 HOH 54 354 54 HOH HOH A . B 2 HOH 55 355 55 HOH HOH A . B 2 HOH 56 356 56 HOH HOH A . B 2 HOH 57 357 57 HOH HOH A . B 2 HOH 58 358 58 HOH HOH A . B 2 HOH 59 359 59 HOH HOH A . B 2 HOH 60 360 60 HOH HOH A . B 2 HOH 61 361 61 HOH HOH A . B 2 HOH 62 362 62 HOH HOH A . B 2 HOH 63 363 63 HOH HOH A . B 2 HOH 64 364 64 HOH HOH A . B 2 HOH 65 365 66 HOH HOH A . B 2 HOH 66 366 67 HOH HOH A . B 2 HOH 67 367 68 HOH HOH A . B 2 HOH 68 368 69 HOH HOH A . B 2 HOH 69 369 70 HOH HOH A . B 2 HOH 70 370 71 HOH HOH A . B 2 HOH 71 371 72 HOH HOH A . B 2 HOH 72 372 73 HOH HOH A . B 2 HOH 73 373 74 HOH HOH A . B 2 HOH 74 374 76 HOH HOH A . B 2 HOH 75 375 77 HOH HOH A . B 2 HOH 76 376 78 HOH HOH A . B 2 HOH 77 377 79 HOH HOH A . B 2 HOH 78 378 80 HOH HOH A . B 2 HOH 79 379 81 HOH HOH A . B 2 HOH 80 380 82 HOH HOH A . B 2 HOH 81 381 84 HOH HOH A . B 2 HOH 82 382 85 HOH HOH A . B 2 HOH 83 383 86 HOH HOH A . B 2 HOH 84 384 87 HOH HOH A . B 2 HOH 85 385 88 HOH HOH A . B 2 HOH 86 386 89 HOH HOH A . B 2 HOH 87 387 90 HOH HOH A . B 2 HOH 88 388 91 HOH HOH A . B 2 HOH 89 389 92 HOH HOH A . B 2 HOH 90 390 93 HOH HOH A . B 2 HOH 91 391 94 HOH HOH A . B 2 HOH 92 392 95 HOH HOH A . B 2 HOH 93 393 97 HOH HOH A . B 2 HOH 94 394 98 HOH HOH A . B 2 HOH 95 395 100 HOH HOH A . B 2 HOH 96 396 101 HOH HOH A . B 2 HOH 97 397 102 HOH HOH A . B 2 HOH 98 398 103 HOH HOH A . B 2 HOH 99 399 104 HOH HOH A . B 2 HOH 100 400 105 HOH HOH A . B 2 HOH 101 401 106 HOH HOH A . B 2 HOH 102 402 107 HOH HOH A . B 2 HOH 103 403 108 HOH HOH A . B 2 HOH 104 404 109 HOH HOH A . B 2 HOH 105 405 110 HOH HOH A . B 2 HOH 106 406 111 HOH HOH A . B 2 HOH 107 407 112 HOH HOH A . B 2 HOH 108 408 113 HOH HOH A . B 2 HOH 109 409 114 HOH HOH A . B 2 HOH 110 410 115 HOH HOH A . B 2 HOH 111 411 116 HOH HOH A . B 2 HOH 112 412 117 HOH HOH A . B 2 HOH 113 413 118 HOH HOH A . B 2 HOH 114 414 120 HOH HOH A . B 2 HOH 115 415 121 HOH HOH A . B 2 HOH 116 416 122 HOH HOH A . B 2 HOH 117 417 123 HOH HOH A . B 2 HOH 118 418 125 HOH HOH A . B 2 HOH 119 419 126 HOH HOH A . B 2 HOH 120 420 127 HOH HOH A . #