data_4NFL # _entry.id 4NFL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NFL pdb_00004nfl 10.2210/pdb4nfl/pdb RCSB RCSB083140 ? ? WWPDB D_1000083140 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4L6C ;Human mitochondrial 5'(3')-deoxyribonucleotidase with inhibitor IPB-T ; unspecified PDB 4MWO ;Human mitochondrial 5'(3')-deoxyribonucleotidase with inhibitor CPB-T ; unspecified # _pdbx_database_status.entry_id 4NFL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-10-31 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pachl, P.' 1 'Rezacova, P.' 2 'Brynda, J.' 3 # _citation.id primary _citation.title ;Conformationally constrained nucleoside phosphonic acids - potent inhibitors of human mitochondrial and cytosolic 5'(3')-nucleotidases. ; _citation.journal_abbrev Org.Biomol.Chem. _citation.journal_volume 12 _citation.page_first 7971 _citation.page_last 7982 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1477-0520 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25178098 _citation.pdbx_database_id_DOI 10.1039/c4ob01332h # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Simak, O.' 1 ? primary 'Pachl, P.' 2 ? primary 'Fabry, M.' 3 ? primary 'Budesinsky, M.' 4 ? primary 'Jandusik, T.' 5 ? primary 'Hnizda, A.' 6 ? primary 'Sklenickova, R.' 7 ? primary 'Petrova, M.' 8 ? primary 'Veverka, V.' 9 ? primary 'Rezacova, P.' 10 ? primary 'Brynda, J.' 11 ? primary 'Rosenberg, I.' 12 ? # _cell.length_a 73.650 _cell.length_b 73.650 _cell.length_c 105.910 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4NFL _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 4NFL _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;5'(3')-deoxyribonucleotidase, mitochondrial ; 23168.391 1 3.1.3.- ? 'UNP residues 32-227' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn '1-{2-deoxy-3,5-O-[(4-nitrophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione' 455.313 1 ? ? ? ? 5 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 7 ? ? ? ? 7 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 7 ? ? ? ? 8 water nat water 18.015 292 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;5',3'-nucleotidase, mitochondrial, Deoxy-5'-nucleotidase 2, dNT-2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAASGGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELE PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPT PSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRP ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAASGGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELE PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPT PSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ALA n 1 5 SER n 1 6 GLY n 1 7 GLY n 1 8 ARG n 1 9 ALA n 1 10 LEU n 1 11 ARG n 1 12 VAL n 1 13 LEU n 1 14 VAL n 1 15 ASP n 1 16 MET n 1 17 ASP n 1 18 GLY n 1 19 VAL n 1 20 LEU n 1 21 ALA n 1 22 ASP n 1 23 PHE n 1 24 GLU n 1 25 GLY n 1 26 GLY n 1 27 PHE n 1 28 LEU n 1 29 ARG n 1 30 LYS n 1 31 PHE n 1 32 ARG n 1 33 ALA n 1 34 ARG n 1 35 PHE n 1 36 PRO n 1 37 ASP n 1 38 GLN n 1 39 PRO n 1 40 PHE n 1 41 ILE n 1 42 ALA n 1 43 LEU n 1 44 GLU n 1 45 ASP n 1 46 ARG n 1 47 ARG n 1 48 GLY n 1 49 PHE n 1 50 TRP n 1 51 VAL n 1 52 SER n 1 53 GLU n 1 54 GLN n 1 55 TYR n 1 56 GLY n 1 57 ARG n 1 58 LEU n 1 59 ARG n 1 60 PRO n 1 61 GLY n 1 62 LEU n 1 63 SER n 1 64 GLU n 1 65 LYS n 1 66 ALA n 1 67 ILE n 1 68 SER n 1 69 ILE n 1 70 TRP n 1 71 GLU n 1 72 SER n 1 73 LYS n 1 74 ASN n 1 75 PHE n 1 76 PHE n 1 77 PHE n 1 78 GLU n 1 79 LEU n 1 80 GLU n 1 81 PRO n 1 82 LEU n 1 83 PRO n 1 84 GLY n 1 85 ALA n 1 86 VAL n 1 87 GLU n 1 88 ALA n 1 89 VAL n 1 90 LYS n 1 91 GLU n 1 92 MET n 1 93 ALA n 1 94 SER n 1 95 LEU n 1 96 GLN n 1 97 ASN n 1 98 THR n 1 99 ASP n 1 100 VAL n 1 101 PHE n 1 102 ILE n 1 103 CYS n 1 104 THR n 1 105 SER n 1 106 PRO n 1 107 ILE n 1 108 LYS n 1 109 MET n 1 110 PHE n 1 111 LYS n 1 112 TYR n 1 113 CYS n 1 114 PRO n 1 115 TYR n 1 116 GLU n 1 117 LYS n 1 118 TYR n 1 119 ALA n 1 120 TRP n 1 121 VAL n 1 122 GLU n 1 123 LYS n 1 124 TYR n 1 125 PHE n 1 126 GLY n 1 127 PRO n 1 128 ASP n 1 129 PHE n 1 130 LEU n 1 131 GLU n 1 132 GLN n 1 133 ILE n 1 134 VAL n 1 135 LEU n 1 136 THR n 1 137 ARG n 1 138 ASP n 1 139 LYS n 1 140 THR n 1 141 VAL n 1 142 VAL n 1 143 SER n 1 144 ALA n 1 145 ASP n 1 146 LEU n 1 147 LEU n 1 148 ILE n 1 149 ASP n 1 150 ASP n 1 151 ARG n 1 152 PRO n 1 153 ASP n 1 154 ILE n 1 155 THR n 1 156 GLY n 1 157 ALA n 1 158 GLU n 1 159 PRO n 1 160 THR n 1 161 PRO n 1 162 SER n 1 163 TRP n 1 164 GLU n 1 165 HIS n 1 166 VAL n 1 167 LEU n 1 168 PHE n 1 169 THR n 1 170 ALA n 1 171 CYS n 1 172 HIS n 1 173 ASN n 1 174 GLN n 1 175 HIS n 1 176 LEU n 1 177 GLN n 1 178 LEU n 1 179 GLN n 1 180 PRO n 1 181 PRO n 1 182 ARG n 1 183 ARG n 1 184 ARG n 1 185 LEU n 1 186 HIS n 1 187 SER n 1 188 TRP n 1 189 ALA n 1 190 ASP n 1 191 ASP n 1 192 TRP n 1 193 LYS n 1 194 ALA n 1 195 ILE n 1 196 LEU n 1 197 ASP n 1 198 SER n 1 199 LYS n 1 200 ARG n 1 201 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NT5M, DNT2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NT5M_HUMAN _struct_ref.pdbx_db_accession Q9NPB1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGA VEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEH VLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRP ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NFL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 201 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NPB1 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 227 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 32 _struct_ref_seq.pdbx_auth_seq_align_end 227 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NFL SER A 1 ? UNP Q9NPB1 ? ? 'expression tag' 27 1 1 4NFL ASN A 2 ? UNP Q9NPB1 ? ? 'expression tag' 28 2 1 4NFL ALA A 3 ? UNP Q9NPB1 ? ? 'expression tag' 29 3 1 4NFL ALA A 4 ? UNP Q9NPB1 ? ? 'expression tag' 30 4 1 4NFL SER A 5 ? UNP Q9NPB1 ? ? 'expression tag' 31 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2JW non-polymer . '1-{2-deoxy-3,5-O-[(4-nitrophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione' ? 'C17 H18 N3 O10 P' 455.313 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4NFL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.10 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '20 mM potassium phosphate monobasic, 8% PEG8000, 10% glycerol, pH 4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2012-01-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97826 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97826 _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 # _reflns.entry_id 4NFL _reflns.d_resolution_high 1.375 _reflns.number_obs 56940 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_netI_over_sigmaI 26.11 _reflns.percent_possible_obs 90.9 _reflns.B_iso_Wilson_estimate 23.35 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 52.078 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.375 1.450 26774 ? 6176 0.674 1.910 ? ? ? ? ? 61.9 1 1 1.450 1.550 48600 ? 8065 0.404 4.130 ? ? ? ? ? 86.1 2 1 1.550 1.670 71625 ? 8757 0.230 8.830 ? ? ? ? ? 99.8 3 1 1.670 1.830 67365 ? 8063 0.128 15.310 ? ? ? ? ? 99.6 4 1 1.830 2.050 61312 ? 7307 0.066 27.340 ? ? ? ? ? 99.2 5 1 2.050 2.360 54343 ? 6443 0.040 42.310 ? ? ? ? ? 98.7 6 1 2.360 2.890 45929 ? 5445 0.032 54.970 ? ? ? ? ? 97.9 7 1 2.890 4.080 35350 ? 4246 0.027 68.630 ? ? ? ? ? 96.6 8 1 4.080 ? 19342 ? 2437 0.026 72.850 ? ? ? ? ? 94.4 9 1 # _refine.entry_id 4NFL _refine.ls_d_res_high 1.375 _refine.ls_d_res_low 46.73 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 92.95 _refine.ls_number_reflns_obs 56839 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1538 _refine.ls_R_factor_R_work 0.1526 _refine.ls_wR_factor_R_work 0.1463 _refine.ls_R_factor_R_free 0.1760 _refine.ls_wR_factor_R_free 0.1674 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2886 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.2308 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.1100 _refine.aniso_B[2][2] -0.1100 _refine.aniso_B[3][3] 0.2200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9730 _refine.correlation_coeff_Fo_to_Fc_free 0.9660 _refine.overall_SU_R_Cruickshank_DPI 0.0474 _refine.overall_SU_R_free 0.0502 _refine.pdbx_overall_ESU_R 0.0470 _refine.pdbx_overall_ESU_R_Free 0.0500 _refine.overall_SU_ML 0.0330 _refine.overall_SU_B 1.5700 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 4L6A' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8897 _refine.B_iso_max 96.240 _refine.B_iso_min 8.840 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1633 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 123 _refine_hist.number_atoms_solvent 292 _refine_hist.number_atoms_total 2048 _refine_hist.d_res_high 1.375 _refine_hist.d_res_low 46.73 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1876 0.016 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1776 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2538 2.044 2.015 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4108 0.955 3.004 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 224 6.006 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 88 28.933 23.182 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 302 11.733 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 12.020 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 266 0.106 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2030 0.009 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 435 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 831 1.627 1.495 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 832 1.626 1.496 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1044 2.602 2.232 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.375 _refine_ls_shell.d_res_low 1.411 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 60.02 _refine_ls_shell.number_reflns_R_work 2516 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2610 _refine_ls_shell.R_factor_R_free 0.2730 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 146 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2662 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NFL _struct.title ;Crystal structure of human mitochondrial 5'(3')-deoxyribonucleotidase in complex with the inhibitor NPB-T ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NFL _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HAD-like, nucleotidase, mitochondria, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 7 ? N N N 7 ? O N N 7 ? P N N 7 ? Q N N 7 ? R N N 7 ? S N N 7 ? T N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 22 ? PHE A 35 ? ASP A 48 PHE A 61 1 ? 14 HELX_P HELX_P2 2 ALA A 42 ? ARG A 46 ? ALA A 68 ARG A 72 5 ? 5 HELX_P HELX_P3 3 TRP A 50 ? ARG A 59 ? TRP A 76 ARG A 85 1 ? 10 HELX_P HELX_P4 4 GLY A 61 ? GLU A 71 ? GLY A 87 GLU A 97 1 ? 11 HELX_P HELX_P5 5 GLY A 84 ? LEU A 95 ? GLY A 110 LEU A 121 1 ? 12 HELX_P HELX_P6 6 TYR A 112 ? GLY A 126 ? TYR A 138 GLY A 152 1 ? 15 HELX_P HELX_P7 7 PRO A 127 ? GLU A 131 ? PRO A 153 GLU A 157 5 ? 5 HELX_P HELX_P8 8 ASP A 191 ? SER A 198 ? ASP A 217 SER A 224 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 15 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 41 A MG 301 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc2 metalc ? ? A ASP 17 O ? ? ? 1_555 B MG . MG ? ? A ASP 43 A MG 301 1_555 ? ? ? ? ? ? ? 2.023 ? ? metalc3 metalc ? ? A ASP 150 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 176 A MG 301 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C PO4 . O2 ? ? A MG 301 A PO4 302 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 301 A HOH 401 1_555 ? ? ? ? ? ? ? 2.102 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 301 A HOH 402 1_555 ? ? ? ? ? ? ? 2.004 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 180 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 206 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 181 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 207 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.76 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 133 ? LEU A 135 ? ILE A 159 LEU A 161 A 2 THR A 98 ? THR A 104 ? THR A 124 THR A 130 A 3 LEU A 10 ? VAL A 14 ? LEU A 36 VAL A 40 A 4 LEU A 146 ? ASP A 149 ? LEU A 172 ASP A 175 A 5 GLU A 164 ? PHE A 168 ? GLU A 190 PHE A 194 A 6 ARG A 183 ? LEU A 185 ? ARG A 209 LEU A 211 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 134 ? O VAL A 160 N ILE A 102 ? N ILE A 128 A 2 3 O ASP A 99 ? O ASP A 125 N LEU A 10 ? N LEU A 36 A 3 4 N LEU A 13 ? N LEU A 39 O LEU A 146 ? O LEU A 172 A 4 5 N LEU A 147 ? N LEU A 173 O VAL A 166 ? O VAL A 192 A 5 6 N LEU A 167 ? N LEU A 193 O ARG A 183 ? O ARG A 209 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 301 ? 6 'BINDING SITE FOR RESIDUE MG A 301' AC2 Software A PO4 302 ? 15 'BINDING SITE FOR RESIDUE PO4 A 302' AC3 Software A 2JW 303 ? 19 'BINDING SITE FOR RESIDUE 2JW A 303' AC4 Software A TRS 304 ? 11 'BINDING SITE FOR RESIDUE TRS A 304' AC5 Software A GOL 305 ? 5 'BINDING SITE FOR RESIDUE GOL A 305' AC6 Software A GOL 306 ? 9 'BINDING SITE FOR RESIDUE GOL A 306' AC7 Software A GOL 307 ? 10 'BINDING SITE FOR RESIDUE GOL A 307' AC8 Software A GOL 308 ? 8 'BINDING SITE FOR RESIDUE GOL A 308' AC9 Software A GOL 309 ? 10 'BINDING SITE FOR RESIDUE GOL A 309' BC1 Software A GOL 310 ? 8 'BINDING SITE FOR RESIDUE GOL A 310' BC2 Software A GOL 311 ? 11 'BINDING SITE FOR RESIDUE GOL A 311' BC3 Software A PEG 312 ? 11 'BINDING SITE FOR RESIDUE PEG A 312' BC4 Software A PEG 313 ? 7 'BINDING SITE FOR RESIDUE PEG A 313' BC5 Software A PEG 314 ? 6 'BINDING SITE FOR RESIDUE PEG A 314' BC6 Software A PEG 315 ? 12 'BINDING SITE FOR RESIDUE PEG A 315' BC7 Software A PEG 316 ? 5 'BINDING SITE FOR RESIDUE PEG A 316' BC8 Software A PEG 317 ? 8 'BINDING SITE FOR RESIDUE PEG A 317' BC9 Software A PEG 318 ? 6 'BINDING SITE FOR RESIDUE PEG A 318' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 15 ? ASP A 41 . ? 1_555 ? 2 AC1 6 ASP A 17 ? ASP A 43 . ? 1_555 ? 3 AC1 6 ASP A 150 ? ASP A 176 . ? 1_555 ? 4 AC1 6 PO4 C . ? PO4 A 302 . ? 1_555 ? 5 AC1 6 HOH T . ? HOH A 401 . ? 1_555 ? 6 AC1 6 HOH T . ? HOH A 402 . ? 1_555 ? 7 AC2 15 ASP A 15 ? ASP A 41 . ? 1_555 ? 8 AC2 15 MET A 16 ? MET A 42 . ? 1_555 ? 9 AC2 15 ASP A 17 ? ASP A 43 . ? 1_555 ? 10 AC2 15 THR A 104 ? THR A 130 . ? 1_555 ? 11 AC2 15 SER A 105 ? SER A 131 . ? 1_555 ? 12 AC2 15 LYS A 117 ? LYS A 143 . ? 1_555 ? 13 AC2 15 LYS A 139 ? LYS A 165 . ? 1_555 ? 14 AC2 15 MG B . ? MG A 301 . ? 1_555 ? 15 AC2 15 2JW D . ? 2JW A 303 . ? 1_555 ? 16 AC2 15 GOL K . ? GOL A 310 . ? 1_555 ? 17 AC2 15 GOL L . ? GOL A 311 . ? 1_555 ? 18 AC2 15 HOH T . ? HOH A 401 . ? 1_555 ? 19 AC2 15 HOH T . ? HOH A 402 . ? 1_555 ? 20 AC2 15 HOH T . ? HOH A 418 . ? 1_555 ? 21 AC2 15 HOH T . ? HOH A 680 . ? 1_555 ? 22 AC3 19 PHE A 49 ? PHE A 75 . ? 1_555 ? 23 AC3 19 TRP A 50 ? TRP A 76 . ? 1_555 ? 24 AC3 19 VAL A 51 ? VAL A 77 . ? 1_555 ? 25 AC3 19 TRP A 70 ? TRP A 96 . ? 1_555 ? 26 AC3 19 SER A 105 ? SER A 131 . ? 1_555 ? 27 AC3 19 ILE A 107 ? ILE A 133 . ? 1_555 ? 28 AC3 19 LYS A 108 ? LYS A 134 . ? 1_555 ? 29 AC3 19 ARG A 137 ? ARG A 163 . ? 1_555 ? 30 AC3 19 ARG A 151 ? ARG A 177 . ? 1_555 ? 31 AC3 19 PO4 C . ? PO4 A 302 . ? 1_555 ? 32 AC3 19 HOH T . ? HOH A 402 . ? 1_555 ? 33 AC3 19 HOH T . ? HOH A 429 . ? 1_555 ? 34 AC3 19 HOH T . ? HOH A 455 . ? 1_555 ? 35 AC3 19 HOH T . ? HOH A 542 . ? 1_555 ? 36 AC3 19 HOH T . ? HOH A 600 . ? 1_555 ? 37 AC3 19 HOH T . ? HOH A 678 . ? 1_555 ? 38 AC3 19 HOH T . ? HOH A 679 . ? 1_555 ? 39 AC3 19 HOH T . ? HOH A 681 . ? 1_555 ? 40 AC3 19 HOH T . ? HOH A 683 . ? 1_555 ? 41 AC4 11 TYR A 112 ? TYR A 138 . ? 3_554 ? 42 AC4 11 TRP A 188 ? TRP A 214 . ? 1_555 ? 43 AC4 11 ALA A 189 ? ALA A 215 . ? 1_555 ? 44 AC4 11 ASP A 190 ? ASP A 216 . ? 1_555 ? 45 AC4 11 ASP A 191 ? ASP A 217 . ? 1_555 ? 46 AC4 11 TRP A 192 ? TRP A 218 . ? 1_555 ? 47 AC4 11 LYS A 193 ? LYS A 219 . ? 1_555 ? 48 AC4 11 GOL J . ? GOL A 309 . ? 1_555 ? 49 AC4 11 HOH T . ? HOH A 578 . ? 1_555 ? 50 AC4 11 HOH T . ? HOH A 638 . ? 3_554 ? 51 AC4 11 HOH T . ? HOH A 689 . ? 3_554 ? 52 AC5 5 ASP A 22 ? ASP A 48 . ? 1_555 ? 53 AC5 5 GLY A 25 ? GLY A 51 . ? 1_555 ? 54 AC5 5 ARG A 29 ? ARG A 55 . ? 1_555 ? 55 AC5 5 PRO A 60 ? PRO A 86 . ? 3_554 ? 56 AC5 5 HOH T . ? HOH A 408 . ? 1_555 ? 57 AC6 9 SER A 1 ? SER A 27 . ? 1_555 ? 58 AC6 9 ASN A 2 ? ASN A 28 . ? 1_555 ? 59 AC6 9 ALA A 93 ? ALA A 119 . ? 1_555 ? 60 AC6 9 THR A 98 ? THR A 124 . ? 1_555 ? 61 AC6 9 ASP A 99 ? ASP A 125 . ? 1_555 ? 62 AC6 9 VAL A 100 ? VAL A 126 . ? 1_555 ? 63 AC6 9 GLN A 132 ? GLN A 158 . ? 1_555 ? 64 AC6 9 HOH T . ? HOH A 541 . ? 1_555 ? 65 AC6 9 HOH T . ? HOH A 653 . ? 1_555 ? 66 AC7 10 ASN A 74 ? ASN A 100 . ? 1_555 ? 67 AC7 10 PHE A 77 ? PHE A 103 . ? 1_555 ? 68 AC7 10 TYR A 115 ? TYR A 141 . ? 1_555 ? 69 AC7 10 PEG M . ? PEG A 312 . ? 1_555 ? 70 AC7 10 HOH T . ? HOH A 420 . ? 1_555 ? 71 AC7 10 HOH T . ? HOH A 506 . ? 6_455 ? 72 AC7 10 HOH T . ? HOH A 592 . ? 1_555 ? 73 AC7 10 HOH T . ? HOH A 642 . ? 6_455 ? 74 AC7 10 HOH T . ? HOH A 655 . ? 1_555 ? 75 AC7 10 HOH T . ? HOH A 687 . ? 1_555 ? 76 AC8 8 PHE A 49 ? PHE A 75 . ? 1_555 ? 77 AC8 8 TRP A 50 ? TRP A 76 . ? 1_555 ? 78 AC8 8 ARG A 151 ? ARG A 177 . ? 1_555 ? 79 AC8 8 PRO A 152 ? PRO A 178 . ? 1_555 ? 80 AC8 8 ASP A 153 ? ASP A 179 . ? 1_555 ? 81 AC8 8 HOH T . ? HOH A 480 . ? 1_555 ? 82 AC8 8 HOH T . ? HOH A 572 . ? 1_555 ? 83 AC8 8 HOH T . ? HOH A 588 . ? 1_555 ? 84 AC9 10 GLY A 84 ? GLY A 110 . ? 1_555 ? 85 AC9 10 GLU A 87 ? GLU A 113 . ? 1_555 ? 86 AC9 10 ALA A 88 ? ALA A 114 . ? 1_555 ? 87 AC9 10 TRP A 188 ? TRP A 214 . ? 1_555 ? 88 AC9 10 ALA A 189 ? ALA A 215 . ? 1_555 ? 89 AC9 10 TRP A 192 ? TRP A 218 . ? 1_555 ? 90 AC9 10 TRS E . ? TRS A 304 . ? 1_555 ? 91 AC9 10 HOH T . ? HOH A 447 . ? 3_554 ? 92 AC9 10 HOH T . ? HOH A 496 . ? 3_554 ? 93 AC9 10 HOH T . ? HOH A 571 . ? 1_555 ? 94 BC1 8 ASP A 17 ? ASP A 43 . ? 1_555 ? 95 BC1 8 GLU A 24 ? GLU A 50 . ? 1_555 ? 96 BC1 8 PHE A 49 ? PHE A 75 . ? 1_555 ? 97 BC1 8 PO4 C . ? PO4 A 302 . ? 1_555 ? 98 BC1 8 GOL L . ? GOL A 311 . ? 1_555 ? 99 BC1 8 HOH T . ? HOH A 402 . ? 1_555 ? 100 BC1 8 HOH T . ? HOH A 523 . ? 1_555 ? 101 BC1 8 HOH T . ? HOH A 678 . ? 1_555 ? 102 BC2 11 PHE A 49 ? PHE A 75 . ? 1_555 ? 103 BC2 11 TRP A 50 ? TRP A 76 . ? 1_555 ? 104 BC2 11 SER A 105 ? SER A 131 . ? 1_555 ? 105 BC2 11 PRO A 106 ? PRO A 132 . ? 1_555 ? 106 BC2 11 ARG A 137 ? ARG A 163 . ? 1_555 ? 107 BC2 11 PO4 C . ? PO4 A 302 . ? 1_555 ? 108 BC2 11 GOL K . ? GOL A 310 . ? 1_555 ? 109 BC2 11 HOH T . ? HOH A 461 . ? 1_555 ? 110 BC2 11 HOH T . ? HOH A 515 . ? 1_555 ? 111 BC2 11 HOH T . ? HOH A 542 . ? 1_555 ? 112 BC2 11 HOH T . ? HOH A 680 . ? 1_555 ? 113 BC3 11 PHE A 77 ? PHE A 103 . ? 1_555 ? 114 BC3 11 LYS A 123 ? LYS A 149 . ? 1_555 ? 115 BC3 11 PRO A 181 ? PRO A 207 . ? 6_455 ? 116 BC3 11 ARG A 182 ? ARG A 208 . ? 6_455 ? 117 BC3 11 ARG A 183 ? ARG A 209 . ? 6_455 ? 118 BC3 11 GOL H . ? GOL A 307 . ? 1_555 ? 119 BC3 11 PEG R . ? PEG A 317 . ? 6_455 ? 120 BC3 11 HOH T . ? HOH A 473 . ? 1_555 ? 121 BC3 11 HOH T . ? HOH A 644 . ? 1_555 ? 122 BC3 11 HOH T . ? HOH A 655 . ? 1_555 ? 123 BC3 11 HOH T . ? HOH A 687 . ? 1_555 ? 124 BC4 7 ASN A 2 ? ASN A 28 . ? 1_555 ? 125 BC4 7 ALA A 3 ? ALA A 29 . ? 1_555 ? 126 BC4 7 GLY A 7 ? GLY A 33 . ? 1_555 ? 127 BC4 7 ALA A 9 ? ALA A 35 . ? 1_555 ? 128 BC4 7 ASP A 99 ? ASP A 125 . ? 1_555 ? 129 BC4 7 ALA A 157 ? ALA A 183 . ? 8_555 ? 130 BC4 7 HOH T . ? HOH A 568 . ? 1_555 ? 131 BC5 6 LYS A 30 ? LYS A 56 . ? 1_555 ? 132 BC5 6 ASN A 74 ? ASN A 100 . ? 1_555 ? 133 BC5 6 GLU A 78 ? GLU A 104 . ? 1_555 ? 134 BC5 6 HOH T . ? HOH A 424 . ? 1_555 ? 135 BC5 6 HOH T . ? HOH A 471 . ? 1_555 ? 136 BC5 6 HOH T . ? HOH A 684 . ? 1_555 ? 137 BC6 12 ARG A 46 ? ARG A 72 . ? 1_555 ? 138 BC6 12 ARG A 47 ? ARG A 73 . ? 1_555 ? 139 BC6 12 GLY A 48 ? GLY A 74 . ? 1_555 ? 140 BC6 12 CYS A 171 ? CYS A 197 . ? 1_555 ? 141 BC6 12 HIS A 172 ? HIS A 198 . ? 1_555 ? 142 BC6 12 ASN A 173 ? ASN A 199 . ? 1_555 ? 143 BC6 12 GLN A 174 ? GLN A 200 . ? 1_555 ? 144 BC6 12 HIS A 175 ? HIS A 201 . ? 1_555 ? 145 BC6 12 LEU A 176 ? LEU A 202 . ? 1_555 ? 146 BC6 12 HOH T . ? HOH A 433 . ? 1_555 ? 147 BC6 12 HOH T . ? HOH A 589 . ? 1_555 ? 148 BC6 12 HOH T . ? HOH A 623 . ? 1_555 ? 149 BC7 5 PRO A 152 ? PRO A 178 . ? 1_555 ? 150 BC7 5 ASP A 153 ? ASP A 179 . ? 1_555 ? 151 BC7 5 ILE A 154 ? ILE A 180 . ? 1_555 ? 152 BC7 5 HIS A 165 ? HIS A 191 . ? 1_555 ? 153 BC7 5 HOH T . ? HOH A 682 . ? 1_555 ? 154 BC8 8 GLU A 122 ? GLU A 148 . ? 6_555 ? 155 BC8 8 LYS A 123 ? LYS A 149 . ? 6_555 ? 156 BC8 8 LEU A 178 ? LEU A 204 . ? 1_555 ? 157 BC8 8 PRO A 180 ? PRO A 206 . ? 1_555 ? 158 BC8 8 ARG A 182 ? ARG A 208 . ? 1_555 ? 159 BC8 8 PEG M . ? PEG A 312 . ? 6_555 ? 160 BC8 8 HOH T . ? HOH A 446 . ? 1_555 ? 161 BC8 8 HOH T . ? HOH A 470 . ? 6_555 ? 162 BC9 6 ASP A 22 ? ASP A 48 . ? 1_555 ? 163 BC9 6 GLY A 25 ? GLY A 51 . ? 1_555 ? 164 BC9 6 LEU A 43 ? LEU A 69 . ? 1_555 ? 165 BC9 6 GLU A 64 ? GLU A 90 . ? 3_554 ? 166 BC9 6 HOH T . ? HOH A 422 . ? 1_555 ? 167 BC9 6 HOH T . ? HOH A 615 . ? 1_555 ? # _atom_sites.entry_id 4NFL _atom_sites.fract_transf_matrix[1][1] 0.013578 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013578 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009442 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 27 27 SER SER A . n A 1 2 ASN 2 28 28 ASN ASN A . n A 1 3 ALA 3 29 29 ALA ALA A . n A 1 4 ALA 4 30 30 ALA ALA A . n A 1 5 SER 5 31 31 SER SER A . n A 1 6 GLY 6 32 32 GLY GLY A . n A 1 7 GLY 7 33 33 GLY GLY A . n A 1 8 ARG 8 34 34 ARG ARG A . n A 1 9 ALA 9 35 35 ALA ALA A . n A 1 10 LEU 10 36 36 LEU LEU A . n A 1 11 ARG 11 37 37 ARG ARG A . n A 1 12 VAL 12 38 38 VAL VAL A . n A 1 13 LEU 13 39 39 LEU LEU A . n A 1 14 VAL 14 40 40 VAL VAL A . n A 1 15 ASP 15 41 41 ASP ASP A . n A 1 16 MET 16 42 42 MET MET A . n A 1 17 ASP 17 43 43 ASP ASP A . n A 1 18 GLY 18 44 44 GLY GLY A . n A 1 19 VAL 19 45 45 VAL VAL A . n A 1 20 LEU 20 46 46 LEU LEU A . n A 1 21 ALA 21 47 47 ALA ALA A . n A 1 22 ASP 22 48 48 ASP ASP A . n A 1 23 PHE 23 49 49 PHE PHE A . n A 1 24 GLU 24 50 50 GLU GLU A . n A 1 25 GLY 25 51 51 GLY GLY A . n A 1 26 GLY 26 52 52 GLY GLY A . n A 1 27 PHE 27 53 53 PHE PHE A . n A 1 28 LEU 28 54 54 LEU LEU A . n A 1 29 ARG 29 55 55 ARG ARG A . n A 1 30 LYS 30 56 56 LYS LYS A . n A 1 31 PHE 31 57 57 PHE PHE A . n A 1 32 ARG 32 58 58 ARG ARG A . n A 1 33 ALA 33 59 59 ALA ALA A . n A 1 34 ARG 34 60 60 ARG ARG A . n A 1 35 PHE 35 61 61 PHE PHE A . n A 1 36 PRO 36 62 62 PRO PRO A . n A 1 37 ASP 37 63 63 ASP ASP A . n A 1 38 GLN 38 64 64 GLN GLN A . n A 1 39 PRO 39 65 65 PRO PRO A . n A 1 40 PHE 40 66 66 PHE PHE A . n A 1 41 ILE 41 67 67 ILE ILE A . n A 1 42 ALA 42 68 68 ALA ALA A . n A 1 43 LEU 43 69 69 LEU LEU A . n A 1 44 GLU 44 70 70 GLU GLU A . n A 1 45 ASP 45 71 71 ASP ASP A . n A 1 46 ARG 46 72 72 ARG ARG A . n A 1 47 ARG 47 73 73 ARG ARG A . n A 1 48 GLY 48 74 74 GLY GLY A . n A 1 49 PHE 49 75 75 PHE PHE A . n A 1 50 TRP 50 76 76 TRP TRP A . n A 1 51 VAL 51 77 77 VAL VAL A . n A 1 52 SER 52 78 78 SER SER A . n A 1 53 GLU 53 79 79 GLU GLU A . n A 1 54 GLN 54 80 80 GLN GLN A . n A 1 55 TYR 55 81 81 TYR TYR A . n A 1 56 GLY 56 82 82 GLY GLY A . n A 1 57 ARG 57 83 83 ARG ARG A . n A 1 58 LEU 58 84 84 LEU LEU A . n A 1 59 ARG 59 85 85 ARG ARG A . n A 1 60 PRO 60 86 86 PRO PRO A . n A 1 61 GLY 61 87 87 GLY GLY A . n A 1 62 LEU 62 88 88 LEU LEU A . n A 1 63 SER 63 89 89 SER SER A . n A 1 64 GLU 64 90 90 GLU GLU A . n A 1 65 LYS 65 91 91 LYS LYS A . n A 1 66 ALA 66 92 92 ALA ALA A . n A 1 67 ILE 67 93 93 ILE ILE A . n A 1 68 SER 68 94 94 SER SER A . n A 1 69 ILE 69 95 95 ILE ILE A . n A 1 70 TRP 70 96 96 TRP TRP A . n A 1 71 GLU 71 97 97 GLU GLU A . n A 1 72 SER 72 98 98 SER SER A . n A 1 73 LYS 73 99 99 LYS LYS A . n A 1 74 ASN 74 100 100 ASN ASN A . n A 1 75 PHE 75 101 101 PHE PHE A . n A 1 76 PHE 76 102 102 PHE PHE A . n A 1 77 PHE 77 103 103 PHE PHE A . n A 1 78 GLU 78 104 104 GLU GLU A . n A 1 79 LEU 79 105 105 LEU LEU A . n A 1 80 GLU 80 106 106 GLU GLU A . n A 1 81 PRO 81 107 107 PRO PRO A . n A 1 82 LEU 82 108 108 LEU LEU A . n A 1 83 PRO 83 109 109 PRO PRO A . n A 1 84 GLY 84 110 110 GLY GLY A . n A 1 85 ALA 85 111 111 ALA ALA A . n A 1 86 VAL 86 112 112 VAL VAL A . n A 1 87 GLU 87 113 113 GLU GLU A . n A 1 88 ALA 88 114 114 ALA ALA A . n A 1 89 VAL 89 115 115 VAL VAL A . n A 1 90 LYS 90 116 116 LYS LYS A . n A 1 91 GLU 91 117 117 GLU GLU A . n A 1 92 MET 92 118 118 MET MET A . n A 1 93 ALA 93 119 119 ALA ALA A . n A 1 94 SER 94 120 120 SER SER A . n A 1 95 LEU 95 121 121 LEU LEU A . n A 1 96 GLN 96 122 122 GLN GLN A . n A 1 97 ASN 97 123 123 ASN ASN A . n A 1 98 THR 98 124 124 THR THR A . n A 1 99 ASP 99 125 125 ASP ASP A . n A 1 100 VAL 100 126 126 VAL VAL A . n A 1 101 PHE 101 127 127 PHE PHE A . n A 1 102 ILE 102 128 128 ILE ILE A . n A 1 103 CYS 103 129 129 CYS CYS A . n A 1 104 THR 104 130 130 THR THR A . n A 1 105 SER 105 131 131 SER SER A . n A 1 106 PRO 106 132 132 PRO PRO A . n A 1 107 ILE 107 133 133 ILE ILE A . n A 1 108 LYS 108 134 134 LYS LYS A . n A 1 109 MET 109 135 135 MET MET A . n A 1 110 PHE 110 136 136 PHE PHE A . n A 1 111 LYS 111 137 137 LYS LYS A . n A 1 112 TYR 112 138 138 TYR TYR A . n A 1 113 CYS 113 139 139 CYS CYS A . n A 1 114 PRO 114 140 140 PRO PRO A . n A 1 115 TYR 115 141 141 TYR TYR A . n A 1 116 GLU 116 142 142 GLU GLU A . n A 1 117 LYS 117 143 143 LYS LYS A . n A 1 118 TYR 118 144 144 TYR TYR A . n A 1 119 ALA 119 145 145 ALA ALA A . n A 1 120 TRP 120 146 146 TRP TRP A . n A 1 121 VAL 121 147 147 VAL VAL A . n A 1 122 GLU 122 148 148 GLU GLU A . n A 1 123 LYS 123 149 149 LYS LYS A . n A 1 124 TYR 124 150 150 TYR TYR A . n A 1 125 PHE 125 151 151 PHE PHE A . n A 1 126 GLY 126 152 152 GLY GLY A . n A 1 127 PRO 127 153 153 PRO PRO A . n A 1 128 ASP 128 154 154 ASP ASP A . n A 1 129 PHE 129 155 155 PHE PHE A . n A 1 130 LEU 130 156 156 LEU LEU A . n A 1 131 GLU 131 157 157 GLU GLU A . n A 1 132 GLN 132 158 158 GLN GLN A . n A 1 133 ILE 133 159 159 ILE ILE A . n A 1 134 VAL 134 160 160 VAL VAL A . n A 1 135 LEU 135 161 161 LEU LEU A . n A 1 136 THR 136 162 162 THR THR A . n A 1 137 ARG 137 163 163 ARG ARG A . n A 1 138 ASP 138 164 164 ASP ASP A . n A 1 139 LYS 139 165 165 LYS LYS A . n A 1 140 THR 140 166 166 THR THR A . n A 1 141 VAL 141 167 167 VAL VAL A . n A 1 142 VAL 142 168 168 VAL VAL A . n A 1 143 SER 143 169 169 SER SER A . n A 1 144 ALA 144 170 170 ALA ALA A . n A 1 145 ASP 145 171 171 ASP ASP A . n A 1 146 LEU 146 172 172 LEU LEU A . n A 1 147 LEU 147 173 173 LEU LEU A . n A 1 148 ILE 148 174 174 ILE ILE A . n A 1 149 ASP 149 175 175 ASP ASP A . n A 1 150 ASP 150 176 176 ASP ASP A . n A 1 151 ARG 151 177 177 ARG ARG A . n A 1 152 PRO 152 178 178 PRO PRO A . n A 1 153 ASP 153 179 179 ASP ASP A . n A 1 154 ILE 154 180 180 ILE ILE A . n A 1 155 THR 155 181 181 THR THR A . n A 1 156 GLY 156 182 182 GLY GLY A . n A 1 157 ALA 157 183 183 ALA ALA A . n A 1 158 GLU 158 184 184 GLU GLU A . n A 1 159 PRO 159 185 185 PRO PRO A . n A 1 160 THR 160 186 186 THR THR A . n A 1 161 PRO 161 187 187 PRO PRO A . n A 1 162 SER 162 188 188 SER SER A . n A 1 163 TRP 163 189 189 TRP TRP A . n A 1 164 GLU 164 190 190 GLU GLU A . n A 1 165 HIS 165 191 191 HIS HIS A . n A 1 166 VAL 166 192 192 VAL VAL A . n A 1 167 LEU 167 193 193 LEU LEU A . n A 1 168 PHE 168 194 194 PHE PHE A . n A 1 169 THR 169 195 195 THR THR A . n A 1 170 ALA 170 196 196 ALA ALA A . n A 1 171 CYS 171 197 197 CYS CYS A . n A 1 172 HIS 172 198 198 HIS HIS A . n A 1 173 ASN 173 199 199 ASN ASN A . n A 1 174 GLN 174 200 200 GLN GLN A . n A 1 175 HIS 175 201 201 HIS HIS A . n A 1 176 LEU 176 202 202 LEU LEU A . n A 1 177 GLN 177 203 203 GLN GLN A . n A 1 178 LEU 178 204 204 LEU LEU A . n A 1 179 GLN 179 205 205 GLN GLN A . n A 1 180 PRO 180 206 206 PRO PRO A . n A 1 181 PRO 181 207 207 PRO PRO A . n A 1 182 ARG 182 208 208 ARG ARG A . n A 1 183 ARG 183 209 209 ARG ARG A . n A 1 184 ARG 184 210 210 ARG ARG A . n A 1 185 LEU 185 211 211 LEU LEU A . n A 1 186 HIS 186 212 212 HIS HIS A . n A 1 187 SER 187 213 213 SER SER A . n A 1 188 TRP 188 214 214 TRP TRP A . n A 1 189 ALA 189 215 215 ALA ALA A . n A 1 190 ASP 190 216 216 ASP ASP A . n A 1 191 ASP 191 217 217 ASP ASP A . n A 1 192 TRP 192 218 218 TRP TRP A . n A 1 193 LYS 193 219 219 LYS LYS A . n A 1 194 ALA 194 220 220 ALA ALA A . n A 1 195 ILE 195 221 221 ILE ILE A . n A 1 196 LEU 196 222 222 LEU LEU A . n A 1 197 ASP 197 223 223 ASP ASP A . n A 1 198 SER 198 224 224 SER SER A . n A 1 199 LYS 199 225 225 LYS LYS A . n A 1 200 ARG 200 226 226 ARG ARG A . n A 1 201 PRO 201 227 227 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 1 MG MG A . C 3 PO4 1 302 1 PO4 PO4 A . D 4 2JW 1 303 1 2JW DRG A . E 5 TRS 1 304 1 TRS TRI A . F 6 GOL 1 305 1 GOL GOL A . G 6 GOL 1 306 2 GOL GOL A . H 6 GOL 1 307 3 GOL GOL A . I 6 GOL 1 308 4 GOL GOL A . J 6 GOL 1 309 5 GOL GOL A . K 6 GOL 1 310 6 GOL GOL A . L 6 GOL 1 311 7 GOL GOL A . M 7 PEG 1 312 1 PEG PEG A . N 7 PEG 1 313 2 PEG PEG A . O 7 PEG 1 314 3 PEG PEG A . P 7 PEG 1 315 4 PEG PEG A . Q 7 PEG 1 316 5 PEG PEG A . R 7 PEG 1 317 6 PEG PEG A . S 7 PEG 1 318 7 PEG PEG A . T 8 HOH 1 401 1 HOH HOH A . T 8 HOH 2 402 2 HOH HOH A . T 8 HOH 3 403 3 HOH HOH A . T 8 HOH 4 404 4 HOH HOH A . T 8 HOH 5 405 5 HOH HOH A . T 8 HOH 6 406 6 HOH HOH A . T 8 HOH 7 407 7 HOH HOH A . T 8 HOH 8 408 8 HOH HOH A . T 8 HOH 9 409 9 HOH HOH A . T 8 HOH 10 410 10 HOH HOH A . T 8 HOH 11 411 11 HOH HOH A . T 8 HOH 12 412 12 HOH HOH A . T 8 HOH 13 413 13 HOH HOH A . T 8 HOH 14 414 14 HOH HOH A . T 8 HOH 15 415 15 HOH HOH A . T 8 HOH 16 416 16 HOH HOH A . T 8 HOH 17 417 17 HOH HOH A . T 8 HOH 18 418 18 HOH HOH A . T 8 HOH 19 419 19 HOH HOH A . T 8 HOH 20 420 20 HOH HOH A . T 8 HOH 21 421 21 HOH HOH A . T 8 HOH 22 422 22 HOH HOH A . T 8 HOH 23 423 23 HOH HOH A . T 8 HOH 24 424 24 HOH HOH A . T 8 HOH 25 425 25 HOH HOH A . T 8 HOH 26 426 26 HOH HOH A . T 8 HOH 27 427 27 HOH HOH A . T 8 HOH 28 428 28 HOH HOH A . T 8 HOH 29 429 29 HOH HOH A . T 8 HOH 30 430 30 HOH HOH A . T 8 HOH 31 431 31 HOH HOH A . T 8 HOH 32 432 32 HOH HOH A . T 8 HOH 33 433 33 HOH HOH A . T 8 HOH 34 434 34 HOH HOH A . T 8 HOH 35 435 35 HOH HOH A . T 8 HOH 36 436 36 HOH HOH A . T 8 HOH 37 437 37 HOH HOH A . T 8 HOH 38 438 38 HOH HOH A . T 8 HOH 39 439 39 HOH HOH A . T 8 HOH 40 440 40 HOH HOH A . T 8 HOH 41 441 41 HOH HOH A . T 8 HOH 42 442 42 HOH HOH A . T 8 HOH 43 443 43 HOH HOH A . T 8 HOH 44 444 44 HOH HOH A . T 8 HOH 45 445 45 HOH HOH A . T 8 HOH 46 446 46 HOH HOH A . T 8 HOH 47 447 47 HOH HOH A . T 8 HOH 48 448 48 HOH HOH A . T 8 HOH 49 449 49 HOH HOH A . T 8 HOH 50 450 50 HOH HOH A . T 8 HOH 51 451 51 HOH HOH A . T 8 HOH 52 452 52 HOH HOH A . T 8 HOH 53 453 53 HOH HOH A . T 8 HOH 54 454 54 HOH HOH A . T 8 HOH 55 455 55 HOH HOH A . T 8 HOH 56 456 56 HOH HOH A . T 8 HOH 57 457 57 HOH HOH A . T 8 HOH 58 458 58 HOH HOH A . T 8 HOH 59 459 59 HOH HOH A . T 8 HOH 60 460 60 HOH HOH A . T 8 HOH 61 461 61 HOH HOH A . T 8 HOH 62 462 62 HOH HOH A . T 8 HOH 63 463 63 HOH HOH A . T 8 HOH 64 464 64 HOH HOH A . T 8 HOH 65 465 65 HOH HOH A . T 8 HOH 66 466 66 HOH HOH A . T 8 HOH 67 467 67 HOH HOH A . T 8 HOH 68 468 68 HOH HOH A . T 8 HOH 69 469 69 HOH HOH A . T 8 HOH 70 470 70 HOH HOH A . T 8 HOH 71 471 71 HOH HOH A . T 8 HOH 72 472 72 HOH HOH A . T 8 HOH 73 473 73 HOH HOH A . T 8 HOH 74 474 74 HOH HOH A . T 8 HOH 75 475 75 HOH HOH A . T 8 HOH 76 476 76 HOH HOH A . T 8 HOH 77 477 77 HOH HOH A . T 8 HOH 78 478 78 HOH HOH A . T 8 HOH 79 479 79 HOH HOH A . T 8 HOH 80 480 80 HOH HOH A . T 8 HOH 81 481 81 HOH HOH A . T 8 HOH 82 482 82 HOH HOH A . T 8 HOH 83 483 83 HOH HOH A . T 8 HOH 84 484 84 HOH HOH A . T 8 HOH 85 485 85 HOH HOH A . T 8 HOH 86 486 86 HOH HOH A . T 8 HOH 87 487 87 HOH HOH A . T 8 HOH 88 488 88 HOH HOH A . T 8 HOH 89 489 89 HOH HOH A . T 8 HOH 90 490 90 HOH HOH A . T 8 HOH 91 491 91 HOH HOH A . T 8 HOH 92 492 92 HOH HOH A . T 8 HOH 93 493 93 HOH HOH A . T 8 HOH 94 494 94 HOH HOH A . T 8 HOH 95 495 95 HOH HOH A . T 8 HOH 96 496 96 HOH HOH A . T 8 HOH 97 497 97 HOH HOH A . T 8 HOH 98 498 98 HOH HOH A . T 8 HOH 99 499 99 HOH HOH A . T 8 HOH 100 500 100 HOH HOH A . T 8 HOH 101 501 101 HOH HOH A . T 8 HOH 102 502 102 HOH HOH A . T 8 HOH 103 503 103 HOH HOH A . T 8 HOH 104 504 104 HOH HOH A . T 8 HOH 105 505 105 HOH HOH A . T 8 HOH 106 506 106 HOH HOH A . T 8 HOH 107 507 107 HOH HOH A . T 8 HOH 108 508 108 HOH HOH A . T 8 HOH 109 509 109 HOH HOH A . T 8 HOH 110 510 110 HOH HOH A . T 8 HOH 111 511 111 HOH HOH A . T 8 HOH 112 512 112 HOH HOH A . T 8 HOH 113 513 113 HOH HOH A . T 8 HOH 114 514 114 HOH HOH A . T 8 HOH 115 515 115 HOH HOH A . T 8 HOH 116 516 116 HOH HOH A . T 8 HOH 117 517 117 HOH HOH A . T 8 HOH 118 518 118 HOH HOH A . T 8 HOH 119 519 119 HOH HOH A . T 8 HOH 120 520 120 HOH HOH A . T 8 HOH 121 521 121 HOH HOH A . T 8 HOH 122 522 122 HOH HOH A . T 8 HOH 123 523 123 HOH HOH A . T 8 HOH 124 524 124 HOH HOH A . T 8 HOH 125 525 125 HOH HOH A . T 8 HOH 126 526 126 HOH HOH A . T 8 HOH 127 527 127 HOH HOH A . T 8 HOH 128 528 128 HOH HOH A . T 8 HOH 129 529 129 HOH HOH A . T 8 HOH 130 530 130 HOH HOH A . T 8 HOH 131 531 131 HOH HOH A . T 8 HOH 132 532 132 HOH HOH A . T 8 HOH 133 533 133 HOH HOH A . T 8 HOH 134 534 134 HOH HOH A . T 8 HOH 135 535 135 HOH HOH A . T 8 HOH 136 536 136 HOH HOH A . T 8 HOH 137 537 137 HOH HOH A . T 8 HOH 138 538 138 HOH HOH A . T 8 HOH 139 539 139 HOH HOH A . T 8 HOH 140 540 140 HOH HOH A . T 8 HOH 141 541 141 HOH HOH A . T 8 HOH 142 542 142 HOH HOH A . T 8 HOH 143 543 143 HOH HOH A . T 8 HOH 144 544 144 HOH HOH A . T 8 HOH 145 545 145 HOH HOH A . T 8 HOH 146 546 146 HOH HOH A . T 8 HOH 147 547 147 HOH HOH A . T 8 HOH 148 548 148 HOH HOH A . T 8 HOH 149 549 149 HOH HOH A . T 8 HOH 150 550 150 HOH HOH A . T 8 HOH 151 551 151 HOH HOH A . T 8 HOH 152 552 152 HOH HOH A . T 8 HOH 153 553 153 HOH HOH A . T 8 HOH 154 554 154 HOH HOH A . T 8 HOH 155 555 155 HOH HOH A . T 8 HOH 156 556 156 HOH HOH A . T 8 HOH 157 557 157 HOH HOH A . T 8 HOH 158 558 158 HOH HOH A . T 8 HOH 159 559 159 HOH HOH A . T 8 HOH 160 560 160 HOH HOH A . T 8 HOH 161 561 161 HOH HOH A . T 8 HOH 162 562 162 HOH HOH A . T 8 HOH 163 563 163 HOH HOH A . T 8 HOH 164 564 164 HOH HOH A . T 8 HOH 165 565 165 HOH HOH A . T 8 HOH 166 566 166 HOH HOH A . T 8 HOH 167 567 167 HOH HOH A . T 8 HOH 168 568 168 HOH HOH A . T 8 HOH 169 569 169 HOH HOH A . T 8 HOH 170 570 170 HOH HOH A . T 8 HOH 171 571 171 HOH HOH A . T 8 HOH 172 572 172 HOH HOH A . T 8 HOH 173 573 173 HOH HOH A . T 8 HOH 174 574 174 HOH HOH A . T 8 HOH 175 575 175 HOH HOH A . T 8 HOH 176 576 176 HOH HOH A . T 8 HOH 177 577 178 HOH HOH A . T 8 HOH 178 578 179 HOH HOH A . T 8 HOH 179 579 180 HOH HOH A . T 8 HOH 180 580 181 HOH HOH A . T 8 HOH 181 581 182 HOH HOH A . T 8 HOH 182 582 183 HOH HOH A . T 8 HOH 183 583 184 HOH HOH A . T 8 HOH 184 584 185 HOH HOH A . T 8 HOH 185 585 186 HOH HOH A . T 8 HOH 186 586 187 HOH HOH A . T 8 HOH 187 587 188 HOH HOH A . T 8 HOH 188 588 189 HOH HOH A . T 8 HOH 189 589 190 HOH HOH A . T 8 HOH 190 590 191 HOH HOH A . T 8 HOH 191 591 192 HOH HOH A . T 8 HOH 192 592 193 HOH HOH A . T 8 HOH 193 593 194 HOH HOH A . T 8 HOH 194 594 195 HOH HOH A . T 8 HOH 195 595 196 HOH HOH A . T 8 HOH 196 596 197 HOH HOH A . T 8 HOH 197 597 198 HOH HOH A . T 8 HOH 198 598 199 HOH HOH A . T 8 HOH 199 599 200 HOH HOH A . T 8 HOH 200 600 201 HOH HOH A . T 8 HOH 201 601 202 HOH HOH A . T 8 HOH 202 602 203 HOH HOH A . T 8 HOH 203 603 204 HOH HOH A . T 8 HOH 204 604 205 HOH HOH A . T 8 HOH 205 605 206 HOH HOH A . T 8 HOH 206 606 207 HOH HOH A . T 8 HOH 207 607 208 HOH HOH A . T 8 HOH 208 608 209 HOH HOH A . T 8 HOH 209 609 210 HOH HOH A . T 8 HOH 210 610 211 HOH HOH A . T 8 HOH 211 611 212 HOH HOH A . T 8 HOH 212 612 213 HOH HOH A . T 8 HOH 213 613 214 HOH HOH A . T 8 HOH 214 614 215 HOH HOH A . T 8 HOH 215 615 216 HOH HOH A . T 8 HOH 216 616 217 HOH HOH A . T 8 HOH 217 617 218 HOH HOH A . T 8 HOH 218 618 219 HOH HOH A . T 8 HOH 219 619 220 HOH HOH A . T 8 HOH 220 620 221 HOH HOH A . T 8 HOH 221 621 222 HOH HOH A . T 8 HOH 222 622 223 HOH HOH A . T 8 HOH 223 623 224 HOH HOH A . T 8 HOH 224 624 225 HOH HOH A . T 8 HOH 225 625 226 HOH HOH A . T 8 HOH 226 626 228 HOH HOH A . T 8 HOH 227 627 229 HOH HOH A . T 8 HOH 228 628 231 HOH HOH A . T 8 HOH 229 629 232 HOH HOH A . T 8 HOH 230 630 233 HOH HOH A . T 8 HOH 231 631 234 HOH HOH A . T 8 HOH 232 632 236 HOH HOH A . T 8 HOH 233 633 237 HOH HOH A . T 8 HOH 234 634 238 HOH HOH A . T 8 HOH 235 635 239 HOH HOH A . T 8 HOH 236 636 240 HOH HOH A . T 8 HOH 237 637 241 HOH HOH A . T 8 HOH 238 638 242 HOH HOH A . T 8 HOH 239 639 243 HOH HOH A . T 8 HOH 240 640 244 HOH HOH A . T 8 HOH 241 641 245 HOH HOH A . T 8 HOH 242 642 246 HOH HOH A . T 8 HOH 243 643 247 HOH HOH A . T 8 HOH 244 644 248 HOH HOH A . T 8 HOH 245 645 249 HOH HOH A . T 8 HOH 246 646 250 HOH HOH A . T 8 HOH 247 647 251 HOH HOH A . T 8 HOH 248 648 252 HOH HOH A . T 8 HOH 249 649 253 HOH HOH A . T 8 HOH 250 650 254 HOH HOH A . T 8 HOH 251 651 255 HOH HOH A . T 8 HOH 252 652 256 HOH HOH A . T 8 HOH 253 653 257 HOH HOH A . T 8 HOH 254 654 258 HOH HOH A . T 8 HOH 255 655 259 HOH HOH A . T 8 HOH 256 656 260 HOH HOH A . T 8 HOH 257 657 261 HOH HOH A . T 8 HOH 258 658 262 HOH HOH A . T 8 HOH 259 659 263 HOH HOH A . T 8 HOH 260 660 264 HOH HOH A . T 8 HOH 261 661 265 HOH HOH A . T 8 HOH 262 662 266 HOH HOH A . T 8 HOH 263 663 267 HOH HOH A . T 8 HOH 264 664 268 HOH HOH A . T 8 HOH 265 665 269 HOH HOH A . T 8 HOH 266 666 270 HOH HOH A . T 8 HOH 267 667 271 HOH HOH A . T 8 HOH 268 668 272 HOH HOH A . T 8 HOH 269 669 273 HOH HOH A . T 8 HOH 270 670 274 HOH HOH A . T 8 HOH 271 671 275 HOH HOH A . T 8 HOH 272 672 276 HOH HOH A . T 8 HOH 273 673 277 HOH HOH A . T 8 HOH 274 674 278 HOH HOH A . T 8 HOH 275 675 279 HOH HOH A . T 8 HOH 276 676 280 HOH HOH A . T 8 HOH 277 677 281 HOH HOH A . T 8 HOH 278 678 282 HOH HOH A . T 8 HOH 279 679 283 HOH HOH A . T 8 HOH 280 680 284 HOH HOH A . T 8 HOH 281 681 285 HOH HOH A . T 8 HOH 282 682 286 HOH HOH A . T 8 HOH 283 683 287 HOH HOH A . T 8 HOH 284 684 288 HOH HOH A . T 8 HOH 285 685 289 HOH HOH A . T 8 HOH 286 686 290 HOH HOH A . T 8 HOH 287 687 291 HOH HOH A . T 8 HOH 288 688 292 HOH HOH A . T 8 HOH 289 689 293 HOH HOH A . T 8 HOH 290 690 294 HOH HOH A . T 8 HOH 291 691 295 HOH HOH A . T 8 HOH 292 692 296 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10580 ? 1 MORE -14 ? 1 'SSA (A^2)' 17600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 52.9550000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 484 ? T HOH . 2 1 A HOH 575 ? T HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 15 ? A ASP 41 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? A ASP 17 ? A ASP 43 ? 1_555 88.1 ? 2 OD2 ? A ASP 15 ? A ASP 41 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 OD1 ? A ASP 150 ? A ASP 176 ? 1_555 84.1 ? 3 O ? A ASP 17 ? A ASP 43 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 OD1 ? A ASP 150 ? A ASP 176 ? 1_555 90.8 ? 4 OD2 ? A ASP 15 ? A ASP 41 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? C PO4 . ? A PO4 302 ? 1_555 87.9 ? 5 O ? A ASP 17 ? A ASP 43 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? C PO4 . ? A PO4 302 ? 1_555 95.1 ? 6 OD1 ? A ASP 150 ? A ASP 176 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? C PO4 . ? A PO4 302 ? 1_555 169.9 ? 7 OD2 ? A ASP 15 ? A ASP 41 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 90.8 ? 8 O ? A ASP 17 ? A ASP 43 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 178.8 ? 9 OD1 ? A ASP 150 ? A ASP 176 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 88.6 ? 10 O2 ? C PO4 . ? A PO4 302 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 85.3 ? 11 OD2 ? A ASP 15 ? A ASP 41 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 173.3 ? 12 O ? A ASP 17 ? A ASP 43 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 86.4 ? 13 OD1 ? A ASP 150 ? A ASP 176 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 92.2 ? 14 O2 ? C PO4 . ? A PO4 302 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 96.3 ? 15 O ? T HOH . ? A HOH 401 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 94.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-10 2 'Structure model' 1 1 2014-10-08 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_ref_seq_dif.details' 29 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -4.1839 -0.2950 14.1889 0.0916 0.0624 0.0896 -0.0028 0.0358 -0.0140 0.6208 0.2080 4.0555 -0.3493 1.5858 -0.8983 0.1410 0.0213 -0.1623 -0.0954 -0.0545 0.0339 -0.1003 0.3859 -0.2296 'X-RAY DIFFRACTION' 2 ? refined -7.2552 26.0317 20.0036 0.0215 0.0239 0.0301 0.0019 0.0203 -0.0041 0.4871 0.5501 0.1100 -0.1222 -0.1515 0.2110 0.0217 0.0119 -0.0335 -0.0014 0.0552 -0.0693 -0.0298 -0.0158 -0.0069 'X-RAY DIFFRACTION' 3 ? refined 4.7278 13.7517 18.7940 0.0079 0.0226 0.0687 0.0043 0.0198 0.0101 0.6105 0.2382 0.3883 0.2814 -0.2557 0.0504 -0.0011 0.0027 -0.0016 -0.0286 -0.1076 -0.0957 -0.0169 -0.0143 0.0462 'X-RAY DIFFRACTION' 4 ? refined -3.8346 24.8374 28.6956 0.0459 0.0563 0.2384 0.0043 0.0428 -0.0151 2.2766 7.6565 0.7978 4.1703 1.3191 2.4348 0.0792 -0.0632 -0.0161 -0.0372 -0.1724 -0.2787 0.1369 0.0554 -0.0298 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 27 A 39 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 40 A 159 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 160 A 227 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 303 A 303 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LEU _pdbx_validate_close_contact.auth_seq_id_1 204 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 PEG _pdbx_validate_close_contact.auth_seq_id_2 317 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 37 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 37 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 37 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.93 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.63 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 42 ? ? -100.67 -73.24 2 1 VAL A 45 ? ? -132.25 -52.32 3 1 ASN A 100 ? ? 75.64 -2.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 205 ? CG ? A GLN 179 CG 2 1 Y 1 A GLN 205 ? CD ? A GLN 179 CD 3 1 Y 1 A GLN 205 ? OE1 ? A GLN 179 OE1 4 1 Y 1 A GLN 205 ? NE2 ? A GLN 179 NE2 5 1 N 1 A PEG 312 ? C1 ? M PEG 1 C1 6 1 N 1 A PEG 312 ? O1 ? M PEG 1 O1 7 1 N 1 A PEG 313 ? O1 ? N PEG 1 O1 8 1 N 1 A PEG 313 ? C3 ? N PEG 1 C3 9 1 N 1 A PEG 313 ? C4 ? N PEG 1 C4 10 1 N 1 A PEG 313 ? O4 ? N PEG 1 O4 11 1 N 1 A PEG 316 ? C1 ? Q PEG 1 C1 12 1 N 1 A PEG 316 ? O1 ? Q PEG 1 O1 13 1 N 1 A PEG 316 ? C2 ? Q PEG 1 C2 14 1 N 1 A PEG 317 ? C1 ? R PEG 1 C1 15 1 N 1 A PEG 317 ? O1 ? R PEG 1 O1 16 1 N 1 A PEG 318 ? C1 ? S PEG 1 C1 17 1 N 1 A PEG 318 ? O1 ? S PEG 1 O1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2JW O2 O N N 1 2JW C2 C N N 2 2JW N3 N N N 3 2JW C4 C N N 4 2JW O4 O N N 5 2JW C5 C N N 6 2JW CAR C N N 7 2JW C6 C N N 8 2JW N1 N N N 9 2JW CAJ C N R 10 2JW OAF O N N 11 2JW CAI C N N 12 2JW CAG C N R 13 2JW OAH O N N 14 2JW CAE C N R 15 2JW CAC C N N 16 2JW OAD O N N 17 2JW CAB C N R 18 2JW PAA P N N 19 2JW OBA O N N 20 2JW OBC O N N 21 2JW OBB O N N 22 2JW CAU C Y N 23 2JW CAV C Y N 24 2JW CAW C Y N 25 2JW CAX C Y N 26 2JW NCA N N N 27 2JW OCA O N N 28 2JW OCB O N N 29 2JW CAY C Y N 30 2JW CAZ C Y N 31 2JW H1 H N N 32 2JW H2 H N N 33 2JW H3 H N N 34 2JW H4 H N N 35 2JW H5 H N N 36 2JW H6 H N N 37 2JW H7 H N N 38 2JW H8 H N N 39 2JW H9 H N N 40 2JW H10 H N N 41 2JW H11 H N N 42 2JW H12 H N N 43 2JW H13 H N N 44 2JW H14 H N N 45 2JW H15 H N N 46 2JW H16 H N N 47 2JW H17 H N N 48 2JW H18 H N N 49 ALA N N N N 50 ALA CA C N S 51 ALA C C N N 52 ALA O O N N 53 ALA CB C N N 54 ALA OXT O N N 55 ALA H H N N 56 ALA H2 H N N 57 ALA HA H N N 58 ALA HB1 H N N 59 ALA HB2 H N N 60 ALA HB3 H N N 61 ALA HXT H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 CYS N N N N 123 CYS CA C N R 124 CYS C C N N 125 CYS O O N N 126 CYS CB C N N 127 CYS SG S N N 128 CYS OXT O N N 129 CYS H H N N 130 CYS H2 H N N 131 CYS HA H N N 132 CYS HB2 H N N 133 CYS HB3 H N N 134 CYS HG H N N 135 CYS HXT H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 GOL C1 C N N 186 GOL O1 O N N 187 GOL C2 C N N 188 GOL O2 O N N 189 GOL C3 C N N 190 GOL O3 O N N 191 GOL H11 H N N 192 GOL H12 H N N 193 GOL HO1 H N N 194 GOL H2 H N N 195 GOL HO2 H N N 196 GOL H31 H N N 197 GOL H32 H N N 198 GOL HO3 H N N 199 HIS N N N N 200 HIS CA C N S 201 HIS C C N N 202 HIS O O N N 203 HIS CB C N N 204 HIS CG C Y N 205 HIS ND1 N Y N 206 HIS CD2 C Y N 207 HIS CE1 C Y N 208 HIS NE2 N Y N 209 HIS OXT O N N 210 HIS H H N N 211 HIS H2 H N N 212 HIS HA H N N 213 HIS HB2 H N N 214 HIS HB3 H N N 215 HIS HD1 H N N 216 HIS HD2 H N N 217 HIS HE1 H N N 218 HIS HE2 H N N 219 HIS HXT H N N 220 HOH O O N N 221 HOH H1 H N N 222 HOH H2 H N N 223 ILE N N N N 224 ILE CA C N S 225 ILE C C N N 226 ILE O O N N 227 ILE CB C N S 228 ILE CG1 C N N 229 ILE CG2 C N N 230 ILE CD1 C N N 231 ILE OXT O N N 232 ILE H H N N 233 ILE H2 H N N 234 ILE HA H N N 235 ILE HB H N N 236 ILE HG12 H N N 237 ILE HG13 H N N 238 ILE HG21 H N N 239 ILE HG22 H N N 240 ILE HG23 H N N 241 ILE HD11 H N N 242 ILE HD12 H N N 243 ILE HD13 H N N 244 ILE HXT H N N 245 LEU N N N N 246 LEU CA C N S 247 LEU C C N N 248 LEU O O N N 249 LEU CB C N N 250 LEU CG C N N 251 LEU CD1 C N N 252 LEU CD2 C N N 253 LEU OXT O N N 254 LEU H H N N 255 LEU H2 H N N 256 LEU HA H N N 257 LEU HB2 H N N 258 LEU HB3 H N N 259 LEU HG H N N 260 LEU HD11 H N N 261 LEU HD12 H N N 262 LEU HD13 H N N 263 LEU HD21 H N N 264 LEU HD22 H N N 265 LEU HD23 H N N 266 LEU HXT H N N 267 LYS N N N N 268 LYS CA C N S 269 LYS C C N N 270 LYS O O N N 271 LYS CB C N N 272 LYS CG C N N 273 LYS CD C N N 274 LYS CE C N N 275 LYS NZ N N N 276 LYS OXT O N N 277 LYS H H N N 278 LYS H2 H N N 279 LYS HA H N N 280 LYS HB2 H N N 281 LYS HB3 H N N 282 LYS HG2 H N N 283 LYS HG3 H N N 284 LYS HD2 H N N 285 LYS HD3 H N N 286 LYS HE2 H N N 287 LYS HE3 H N N 288 LYS HZ1 H N N 289 LYS HZ2 H N N 290 LYS HZ3 H N N 291 LYS HXT H N N 292 MET N N N N 293 MET CA C N S 294 MET C C N N 295 MET O O N N 296 MET CB C N N 297 MET CG C N N 298 MET SD S N N 299 MET CE C N N 300 MET OXT O N N 301 MET H H N N 302 MET H2 H N N 303 MET HA H N N 304 MET HB2 H N N 305 MET HB3 H N N 306 MET HG2 H N N 307 MET HG3 H N N 308 MET HE1 H N N 309 MET HE2 H N N 310 MET HE3 H N N 311 MET HXT H N N 312 MG MG MG N N 313 PEG C1 C N N 314 PEG O1 O N N 315 PEG C2 C N N 316 PEG O2 O N N 317 PEG C3 C N N 318 PEG C4 C N N 319 PEG O4 O N N 320 PEG H11 H N N 321 PEG H12 H N N 322 PEG HO1 H N N 323 PEG H21 H N N 324 PEG H22 H N N 325 PEG H31 H N N 326 PEG H32 H N N 327 PEG H41 H N N 328 PEG H42 H N N 329 PEG HO4 H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PO4 P P N N 354 PO4 O1 O N N 355 PO4 O2 O N N 356 PO4 O3 O N N 357 PO4 O4 O N N 358 PRO N N N N 359 PRO CA C N S 360 PRO C C N N 361 PRO O O N N 362 PRO CB C N N 363 PRO CG C N N 364 PRO CD C N N 365 PRO OXT O N N 366 PRO H H N N 367 PRO HA H N N 368 PRO HB2 H N N 369 PRO HB3 H N N 370 PRO HG2 H N N 371 PRO HG3 H N N 372 PRO HD2 H N N 373 PRO HD3 H N N 374 PRO HXT H N N 375 SER N N N N 376 SER CA C N S 377 SER C C N N 378 SER O O N N 379 SER CB C N N 380 SER OG O N N 381 SER OXT O N N 382 SER H H N N 383 SER H2 H N N 384 SER HA H N N 385 SER HB2 H N N 386 SER HB3 H N N 387 SER HG H N N 388 SER HXT H N N 389 THR N N N N 390 THR CA C N S 391 THR C C N N 392 THR O O N N 393 THR CB C N R 394 THR OG1 O N N 395 THR CG2 C N N 396 THR OXT O N N 397 THR H H N N 398 THR H2 H N N 399 THR HA H N N 400 THR HB H N N 401 THR HG1 H N N 402 THR HG21 H N N 403 THR HG22 H N N 404 THR HG23 H N N 405 THR HXT H N N 406 TRP N N N N 407 TRP CA C N S 408 TRP C C N N 409 TRP O O N N 410 TRP CB C N N 411 TRP CG C Y N 412 TRP CD1 C Y N 413 TRP CD2 C Y N 414 TRP NE1 N Y N 415 TRP CE2 C Y N 416 TRP CE3 C Y N 417 TRP CZ2 C Y N 418 TRP CZ3 C Y N 419 TRP CH2 C Y N 420 TRP OXT O N N 421 TRP H H N N 422 TRP H2 H N N 423 TRP HA H N N 424 TRP HB2 H N N 425 TRP HB3 H N N 426 TRP HD1 H N N 427 TRP HE1 H N N 428 TRP HE3 H N N 429 TRP HZ2 H N N 430 TRP HZ3 H N N 431 TRP HH2 H N N 432 TRP HXT H N N 433 TRS C C N N 434 TRS C1 C N N 435 TRS C2 C N N 436 TRS C3 C N N 437 TRS N N N N 438 TRS O1 O N N 439 TRS O2 O N N 440 TRS O3 O N N 441 TRS H11 H N N 442 TRS H12 H N N 443 TRS H21 H N N 444 TRS H22 H N N 445 TRS H31 H N N 446 TRS H32 H N N 447 TRS HN1 H N N 448 TRS HN2 H N N 449 TRS HN3 H N N 450 TRS HO1 H N N 451 TRS HO2 H N N 452 TRS HO3 H N N 453 TYR N N N N 454 TYR CA C N S 455 TYR C C N N 456 TYR O O N N 457 TYR CB C N N 458 TYR CG C Y N 459 TYR CD1 C Y N 460 TYR CD2 C Y N 461 TYR CE1 C Y N 462 TYR CE2 C Y N 463 TYR CZ C Y N 464 TYR OH O N N 465 TYR OXT O N N 466 TYR H H N N 467 TYR H2 H N N 468 TYR HA H N N 469 TYR HB2 H N N 470 TYR HB3 H N N 471 TYR HD1 H N N 472 TYR HD2 H N N 473 TYR HE1 H N N 474 TYR HE2 H N N 475 TYR HH H N N 476 TYR HXT H N N 477 VAL N N N N 478 VAL CA C N S 479 VAL C C N N 480 VAL O O N N 481 VAL CB C N N 482 VAL CG1 C N N 483 VAL CG2 C N N 484 VAL OXT O N N 485 VAL H H N N 486 VAL H2 H N N 487 VAL HA H N N 488 VAL HB H N N 489 VAL HG11 H N N 490 VAL HG12 H N N 491 VAL HG13 H N N 492 VAL HG21 H N N 493 VAL HG22 H N N 494 VAL HG23 H N N 495 VAL HXT H N N 496 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2JW O4 C4 doub N N 1 2JW CAR C5 sing N N 2 2JW C4 C5 sing N N 3 2JW C4 N3 sing N N 4 2JW C5 C6 doub N N 5 2JW N3 C2 sing N N 6 2JW C6 N1 sing N N 7 2JW C2 N1 sing N N 8 2JW C2 O2 doub N N 9 2JW N1 CAJ sing N N 10 2JW CAJ CAI sing N N 11 2JW CAJ OAF sing N N 12 2JW CAI CAG sing N N 13 2JW OAF CAE sing N N 14 2JW CAG OAH sing N N 15 2JW CAG CAE sing N N 16 2JW OAH CAB sing N N 17 2JW CAV CAW doub Y N 18 2JW CAV CAU sing Y N 19 2JW CAW CAX sing Y N 20 2JW CAE CAC sing N N 21 2JW OCA NCA sing N N 22 2JW CAU CAB sing N N 23 2JW CAU CAZ doub Y N 24 2JW CAX NCA sing N N 25 2JW CAX CAY doub Y N 26 2JW CAB OAD sing N N 27 2JW CAB PAA sing N N 28 2JW NCA OCB doub N N 29 2JW OAD CAC sing N N 30 2JW CAZ CAY sing Y N 31 2JW OBC PAA doub N N 32 2JW OBA PAA sing N N 33 2JW PAA OBB sing N N 34 2JW N3 H1 sing N N 35 2JW CAR H2 sing N N 36 2JW CAR H3 sing N N 37 2JW CAR H4 sing N N 38 2JW C6 H5 sing N N 39 2JW CAJ H6 sing N N 40 2JW CAI H7 sing N N 41 2JW CAI H8 sing N N 42 2JW CAG H9 sing N N 43 2JW CAE H10 sing N N 44 2JW CAC H11 sing N N 45 2JW CAC H12 sing N N 46 2JW OBA H13 sing N N 47 2JW OBB H14 sing N N 48 2JW CAV H15 sing N N 49 2JW CAW H16 sing N N 50 2JW CAY H17 sing N N 51 2JW CAZ H18 sing N N 52 ALA N CA sing N N 53 ALA N H sing N N 54 ALA N H2 sing N N 55 ALA CA C sing N N 56 ALA CA CB sing N N 57 ALA CA HA sing N N 58 ALA C O doub N N 59 ALA C OXT sing N N 60 ALA CB HB1 sing N N 61 ALA CB HB2 sing N N 62 ALA CB HB3 sing N N 63 ALA OXT HXT sing N N 64 ARG N CA sing N N 65 ARG N H sing N N 66 ARG N H2 sing N N 67 ARG CA C sing N N 68 ARG CA CB sing N N 69 ARG CA HA sing N N 70 ARG C O doub N N 71 ARG C OXT sing N N 72 ARG CB CG sing N N 73 ARG CB HB2 sing N N 74 ARG CB HB3 sing N N 75 ARG CG CD sing N N 76 ARG CG HG2 sing N N 77 ARG CG HG3 sing N N 78 ARG CD NE sing N N 79 ARG CD HD2 sing N N 80 ARG CD HD3 sing N N 81 ARG NE CZ sing N N 82 ARG NE HE sing N N 83 ARG CZ NH1 sing N N 84 ARG CZ NH2 doub N N 85 ARG NH1 HH11 sing N N 86 ARG NH1 HH12 sing N N 87 ARG NH2 HH21 sing N N 88 ARG NH2 HH22 sing N N 89 ARG OXT HXT sing N N 90 ASN N CA sing N N 91 ASN N H sing N N 92 ASN N H2 sing N N 93 ASN CA C sing N N 94 ASN CA CB sing N N 95 ASN CA HA sing N N 96 ASN C O doub N N 97 ASN C OXT sing N N 98 ASN CB CG sing N N 99 ASN CB HB2 sing N N 100 ASN CB HB3 sing N N 101 ASN CG OD1 doub N N 102 ASN CG ND2 sing N N 103 ASN ND2 HD21 sing N N 104 ASN ND2 HD22 sing N N 105 ASN OXT HXT sing N N 106 ASP N CA sing N N 107 ASP N H sing N N 108 ASP N H2 sing N N 109 ASP CA C sing N N 110 ASP CA CB sing N N 111 ASP CA HA sing N N 112 ASP C O doub N N 113 ASP C OXT sing N N 114 ASP CB CG sing N N 115 ASP CB HB2 sing N N 116 ASP CB HB3 sing N N 117 ASP CG OD1 doub N N 118 ASP CG OD2 sing N N 119 ASP OD2 HD2 sing N N 120 ASP OXT HXT sing N N 121 CYS N CA sing N N 122 CYS N H sing N N 123 CYS N H2 sing N N 124 CYS CA C sing N N 125 CYS CA CB sing N N 126 CYS CA HA sing N N 127 CYS C O doub N N 128 CYS C OXT sing N N 129 CYS CB SG sing N N 130 CYS CB HB2 sing N N 131 CYS CB HB3 sing N N 132 CYS SG HG sing N N 133 CYS OXT HXT sing N N 134 GLN N CA sing N N 135 GLN N H sing N N 136 GLN N H2 sing N N 137 GLN CA C sing N N 138 GLN CA CB sing N N 139 GLN CA HA sing N N 140 GLN C O doub N N 141 GLN C OXT sing N N 142 GLN CB CG sing N N 143 GLN CB HB2 sing N N 144 GLN CB HB3 sing N N 145 GLN CG CD sing N N 146 GLN CG HG2 sing N N 147 GLN CG HG3 sing N N 148 GLN CD OE1 doub N N 149 GLN CD NE2 sing N N 150 GLN NE2 HE21 sing N N 151 GLN NE2 HE22 sing N N 152 GLN OXT HXT sing N N 153 GLU N CA sing N N 154 GLU N H sing N N 155 GLU N H2 sing N N 156 GLU CA C sing N N 157 GLU CA CB sing N N 158 GLU CA HA sing N N 159 GLU C O doub N N 160 GLU C OXT sing N N 161 GLU CB CG sing N N 162 GLU CB HB2 sing N N 163 GLU CB HB3 sing N N 164 GLU CG CD sing N N 165 GLU CG HG2 sing N N 166 GLU CG HG3 sing N N 167 GLU CD OE1 doub N N 168 GLU CD OE2 sing N N 169 GLU OE2 HE2 sing N N 170 GLU OXT HXT sing N N 171 GLY N CA sing N N 172 GLY N H sing N N 173 GLY N H2 sing N N 174 GLY CA C sing N N 175 GLY CA HA2 sing N N 176 GLY CA HA3 sing N N 177 GLY C O doub N N 178 GLY C OXT sing N N 179 GLY OXT HXT sing N N 180 GOL C1 O1 sing N N 181 GOL C1 C2 sing N N 182 GOL C1 H11 sing N N 183 GOL C1 H12 sing N N 184 GOL O1 HO1 sing N N 185 GOL C2 O2 sing N N 186 GOL C2 C3 sing N N 187 GOL C2 H2 sing N N 188 GOL O2 HO2 sing N N 189 GOL C3 O3 sing N N 190 GOL C3 H31 sing N N 191 GOL C3 H32 sing N N 192 GOL O3 HO3 sing N N 193 HIS N CA sing N N 194 HIS N H sing N N 195 HIS N H2 sing N N 196 HIS CA C sing N N 197 HIS CA CB sing N N 198 HIS CA HA sing N N 199 HIS C O doub N N 200 HIS C OXT sing N N 201 HIS CB CG sing N N 202 HIS CB HB2 sing N N 203 HIS CB HB3 sing N N 204 HIS CG ND1 sing Y N 205 HIS CG CD2 doub Y N 206 HIS ND1 CE1 doub Y N 207 HIS ND1 HD1 sing N N 208 HIS CD2 NE2 sing Y N 209 HIS CD2 HD2 sing N N 210 HIS CE1 NE2 sing Y N 211 HIS CE1 HE1 sing N N 212 HIS NE2 HE2 sing N N 213 HIS OXT HXT sing N N 214 HOH O H1 sing N N 215 HOH O H2 sing N N 216 ILE N CA sing N N 217 ILE N H sing N N 218 ILE N H2 sing N N 219 ILE CA C sing N N 220 ILE CA CB sing N N 221 ILE CA HA sing N N 222 ILE C O doub N N 223 ILE C OXT sing N N 224 ILE CB CG1 sing N N 225 ILE CB CG2 sing N N 226 ILE CB HB sing N N 227 ILE CG1 CD1 sing N N 228 ILE CG1 HG12 sing N N 229 ILE CG1 HG13 sing N N 230 ILE CG2 HG21 sing N N 231 ILE CG2 HG22 sing N N 232 ILE CG2 HG23 sing N N 233 ILE CD1 HD11 sing N N 234 ILE CD1 HD12 sing N N 235 ILE CD1 HD13 sing N N 236 ILE OXT HXT sing N N 237 LEU N CA sing N N 238 LEU N H sing N N 239 LEU N H2 sing N N 240 LEU CA C sing N N 241 LEU CA CB sing N N 242 LEU CA HA sing N N 243 LEU C O doub N N 244 LEU C OXT sing N N 245 LEU CB CG sing N N 246 LEU CB HB2 sing N N 247 LEU CB HB3 sing N N 248 LEU CG CD1 sing N N 249 LEU CG CD2 sing N N 250 LEU CG HG sing N N 251 LEU CD1 HD11 sing N N 252 LEU CD1 HD12 sing N N 253 LEU CD1 HD13 sing N N 254 LEU CD2 HD21 sing N N 255 LEU CD2 HD22 sing N N 256 LEU CD2 HD23 sing N N 257 LEU OXT HXT sing N N 258 LYS N CA sing N N 259 LYS N H sing N N 260 LYS N H2 sing N N 261 LYS CA C sing N N 262 LYS CA CB sing N N 263 LYS CA HA sing N N 264 LYS C O doub N N 265 LYS C OXT sing N N 266 LYS CB CG sing N N 267 LYS CB HB2 sing N N 268 LYS CB HB3 sing N N 269 LYS CG CD sing N N 270 LYS CG HG2 sing N N 271 LYS CG HG3 sing N N 272 LYS CD CE sing N N 273 LYS CD HD2 sing N N 274 LYS CD HD3 sing N N 275 LYS CE NZ sing N N 276 LYS CE HE2 sing N N 277 LYS CE HE3 sing N N 278 LYS NZ HZ1 sing N N 279 LYS NZ HZ2 sing N N 280 LYS NZ HZ3 sing N N 281 LYS OXT HXT sing N N 282 MET N CA sing N N 283 MET N H sing N N 284 MET N H2 sing N N 285 MET CA C sing N N 286 MET CA CB sing N N 287 MET CA HA sing N N 288 MET C O doub N N 289 MET C OXT sing N N 290 MET CB CG sing N N 291 MET CB HB2 sing N N 292 MET CB HB3 sing N N 293 MET CG SD sing N N 294 MET CG HG2 sing N N 295 MET CG HG3 sing N N 296 MET SD CE sing N N 297 MET CE HE1 sing N N 298 MET CE HE2 sing N N 299 MET CE HE3 sing N N 300 MET OXT HXT sing N N 301 PEG C1 O1 sing N N 302 PEG C1 C2 sing N N 303 PEG C1 H11 sing N N 304 PEG C1 H12 sing N N 305 PEG O1 HO1 sing N N 306 PEG C2 O2 sing N N 307 PEG C2 H21 sing N N 308 PEG C2 H22 sing N N 309 PEG O2 C3 sing N N 310 PEG C3 C4 sing N N 311 PEG C3 H31 sing N N 312 PEG C3 H32 sing N N 313 PEG C4 O4 sing N N 314 PEG C4 H41 sing N N 315 PEG C4 H42 sing N N 316 PEG O4 HO4 sing N N 317 PHE N CA sing N N 318 PHE N H sing N N 319 PHE N H2 sing N N 320 PHE CA C sing N N 321 PHE CA CB sing N N 322 PHE CA HA sing N N 323 PHE C O doub N N 324 PHE C OXT sing N N 325 PHE CB CG sing N N 326 PHE CB HB2 sing N N 327 PHE CB HB3 sing N N 328 PHE CG CD1 doub Y N 329 PHE CG CD2 sing Y N 330 PHE CD1 CE1 sing Y N 331 PHE CD1 HD1 sing N N 332 PHE CD2 CE2 doub Y N 333 PHE CD2 HD2 sing N N 334 PHE CE1 CZ doub Y N 335 PHE CE1 HE1 sing N N 336 PHE CE2 CZ sing Y N 337 PHE CE2 HE2 sing N N 338 PHE CZ HZ sing N N 339 PHE OXT HXT sing N N 340 PO4 P O1 doub N N 341 PO4 P O2 sing N N 342 PO4 P O3 sing N N 343 PO4 P O4 sing N N 344 PRO N CA sing N N 345 PRO N CD sing N N 346 PRO N H sing N N 347 PRO CA C sing N N 348 PRO CA CB sing N N 349 PRO CA HA sing N N 350 PRO C O doub N N 351 PRO C OXT sing N N 352 PRO CB CG sing N N 353 PRO CB HB2 sing N N 354 PRO CB HB3 sing N N 355 PRO CG CD sing N N 356 PRO CG HG2 sing N N 357 PRO CG HG3 sing N N 358 PRO CD HD2 sing N N 359 PRO CD HD3 sing N N 360 PRO OXT HXT sing N N 361 SER N CA sing N N 362 SER N H sing N N 363 SER N H2 sing N N 364 SER CA C sing N N 365 SER CA CB sing N N 366 SER CA HA sing N N 367 SER C O doub N N 368 SER C OXT sing N N 369 SER CB OG sing N N 370 SER CB HB2 sing N N 371 SER CB HB3 sing N N 372 SER OG HG sing N N 373 SER OXT HXT sing N N 374 THR N CA sing N N 375 THR N H sing N N 376 THR N H2 sing N N 377 THR CA C sing N N 378 THR CA CB sing N N 379 THR CA HA sing N N 380 THR C O doub N N 381 THR C OXT sing N N 382 THR CB OG1 sing N N 383 THR CB CG2 sing N N 384 THR CB HB sing N N 385 THR OG1 HG1 sing N N 386 THR CG2 HG21 sing N N 387 THR CG2 HG22 sing N N 388 THR CG2 HG23 sing N N 389 THR OXT HXT sing N N 390 TRP N CA sing N N 391 TRP N H sing N N 392 TRP N H2 sing N N 393 TRP CA C sing N N 394 TRP CA CB sing N N 395 TRP CA HA sing N N 396 TRP C O doub N N 397 TRP C OXT sing N N 398 TRP CB CG sing N N 399 TRP CB HB2 sing N N 400 TRP CB HB3 sing N N 401 TRP CG CD1 doub Y N 402 TRP CG CD2 sing Y N 403 TRP CD1 NE1 sing Y N 404 TRP CD1 HD1 sing N N 405 TRP CD2 CE2 doub Y N 406 TRP CD2 CE3 sing Y N 407 TRP NE1 CE2 sing Y N 408 TRP NE1 HE1 sing N N 409 TRP CE2 CZ2 sing Y N 410 TRP CE3 CZ3 doub Y N 411 TRP CE3 HE3 sing N N 412 TRP CZ2 CH2 doub Y N 413 TRP CZ2 HZ2 sing N N 414 TRP CZ3 CH2 sing Y N 415 TRP CZ3 HZ3 sing N N 416 TRP CH2 HH2 sing N N 417 TRP OXT HXT sing N N 418 TRS C C1 sing N N 419 TRS C C2 sing N N 420 TRS C C3 sing N N 421 TRS C N sing N N 422 TRS C1 O1 sing N N 423 TRS C1 H11 sing N N 424 TRS C1 H12 sing N N 425 TRS C2 O2 sing N N 426 TRS C2 H21 sing N N 427 TRS C2 H22 sing N N 428 TRS C3 O3 sing N N 429 TRS C3 H31 sing N N 430 TRS C3 H32 sing N N 431 TRS N HN1 sing N N 432 TRS N HN2 sing N N 433 TRS N HN3 sing N N 434 TRS O1 HO1 sing N N 435 TRS O2 HO2 sing N N 436 TRS O3 HO3 sing N N 437 TYR N CA sing N N 438 TYR N H sing N N 439 TYR N H2 sing N N 440 TYR CA C sing N N 441 TYR CA CB sing N N 442 TYR CA HA sing N N 443 TYR C O doub N N 444 TYR C OXT sing N N 445 TYR CB CG sing N N 446 TYR CB HB2 sing N N 447 TYR CB HB3 sing N N 448 TYR CG CD1 doub Y N 449 TYR CG CD2 sing Y N 450 TYR CD1 CE1 sing Y N 451 TYR CD1 HD1 sing N N 452 TYR CD2 CE2 doub Y N 453 TYR CD2 HD2 sing N N 454 TYR CE1 CZ doub Y N 455 TYR CE1 HE1 sing N N 456 TYR CE2 CZ sing Y N 457 TYR CE2 HE2 sing N N 458 TYR CZ OH sing N N 459 TYR OH HH sing N N 460 TYR OXT HXT sing N N 461 VAL N CA sing N N 462 VAL N H sing N N 463 VAL N H2 sing N N 464 VAL CA C sing N N 465 VAL CA CB sing N N 466 VAL CA HA sing N N 467 VAL C O doub N N 468 VAL C OXT sing N N 469 VAL CB CG1 sing N N 470 VAL CB CG2 sing N N 471 VAL CB HB sing N N 472 VAL CG1 HG11 sing N N 473 VAL CG1 HG12 sing N N 474 VAL CG1 HG13 sing N N 475 VAL CG2 HG21 sing N N 476 VAL CG2 HG22 sing N N 477 VAL CG2 HG23 sing N N 478 VAL OXT HXT sing N N 479 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'PHOSPHATE ION' PO4 4 '1-{2-deoxy-3,5-O-[(4-nitrophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione' 2JW 5 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 6 GLYCEROL GOL 7 'DI(HYDROXYETHYL)ETHER' PEG 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4L6A _pdbx_initial_refinement_model.details 'PDB ENTRY 4L6A' #