data_4NUB # _entry.id 4NUB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NUB RCSB RCSB083665 WWPDB D_1000083665 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NUB _pdbx_database_status.recvd_initial_deposition_date 2013-12-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Van staalduinen, L.M.' 1 'Jia, Z.' 2 'Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)' 3 # _citation.id primary _citation.title ;Structure and Functional Analysis of YcfD, a Novel 2-Oxoglutarate/Fe(2+)-Dependent Oxygenase Involved in Translational Regulation in Escherichia coli. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 1898 _citation.page_last 1910 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24530688 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2014.02.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'van Staalduinen, L.M.' 1 primary 'Novakowski, S.K.' 2 primary 'Jia, Z.' 3 # _cell.entry_id 4NUB _cell.length_a 75.731 _cell.length_b 75.731 _cell.length_c 210.898 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NUB _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '50S ribosomal protein L16 arginine hydroxylase' 44333.980 1 1.14.11.- 'E146A, K147A' ? ? 2 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 51 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ribosomal oxygenase YcfD, ROX' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)EYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA(MSE)ESEVDSRLVSHQDGKWQVSHGPFESYD HLGETNWSLLVQAVNHWHEPTAAL(MSE)RPFRELPDWRIDDL(MSE)ISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRV GAALQ(MSE)KQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENA(MSE)NYSVGFRAPNTRELISGFAD YVLQRELGGNYYSDPDVPPRAHPADVLPQE(MSE)DKLRE(MSE)(MSE)LELINQPEHFKQWFGEFISQSRHELDIAPP EPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLA(MSE)L AALVNSGYWFFEGSGRVEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWS LLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGAALQMKQHCPHPDLL QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYA NGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEGSGRVEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLU n 1 3 TYR n 1 4 GLN n 1 5 LEU n 1 6 THR n 1 7 LEU n 1 8 ASN n 1 9 TRP n 1 10 PRO n 1 11 ASP n 1 12 PHE n 1 13 LEU n 1 14 GLU n 1 15 ARG n 1 16 HIS n 1 17 TRP n 1 18 GLN n 1 19 LYS n 1 20 ARG n 1 21 PRO n 1 22 VAL n 1 23 VAL n 1 24 LEU n 1 25 LYS n 1 26 ARG n 1 27 GLY n 1 28 PHE n 1 29 ASN n 1 30 ASN n 1 31 PHE n 1 32 ILE n 1 33 ASP n 1 34 PRO n 1 35 ILE n 1 36 SER n 1 37 PRO n 1 38 ASP n 1 39 GLU n 1 40 LEU n 1 41 ALA n 1 42 GLY n 1 43 LEU n 1 44 ALA n 1 45 MSE n 1 46 GLU n 1 47 SER n 1 48 GLU n 1 49 VAL n 1 50 ASP n 1 51 SER n 1 52 ARG n 1 53 LEU n 1 54 VAL n 1 55 SER n 1 56 HIS n 1 57 GLN n 1 58 ASP n 1 59 GLY n 1 60 LYS n 1 61 TRP n 1 62 GLN n 1 63 VAL n 1 64 SER n 1 65 HIS n 1 66 GLY n 1 67 PRO n 1 68 PHE n 1 69 GLU n 1 70 SER n 1 71 TYR n 1 72 ASP n 1 73 HIS n 1 74 LEU n 1 75 GLY n 1 76 GLU n 1 77 THR n 1 78 ASN n 1 79 TRP n 1 80 SER n 1 81 LEU n 1 82 LEU n 1 83 VAL n 1 84 GLN n 1 85 ALA n 1 86 VAL n 1 87 ASN n 1 88 HIS n 1 89 TRP n 1 90 HIS n 1 91 GLU n 1 92 PRO n 1 93 THR n 1 94 ALA n 1 95 ALA n 1 96 LEU n 1 97 MSE n 1 98 ARG n 1 99 PRO n 1 100 PHE n 1 101 ARG n 1 102 GLU n 1 103 LEU n 1 104 PRO n 1 105 ASP n 1 106 TRP n 1 107 ARG n 1 108 ILE n 1 109 ASP n 1 110 ASP n 1 111 LEU n 1 112 MSE n 1 113 ILE n 1 114 SER n 1 115 PHE n 1 116 SER n 1 117 VAL n 1 118 PRO n 1 119 GLY n 1 120 GLY n 1 121 GLY n 1 122 VAL n 1 123 GLY n 1 124 PRO n 1 125 HIS n 1 126 LEU n 1 127 ASP n 1 128 GLN n 1 129 TYR n 1 130 ASP n 1 131 VAL n 1 132 PHE n 1 133 ILE n 1 134 ILE n 1 135 GLN n 1 136 GLY n 1 137 THR n 1 138 GLY n 1 139 ARG n 1 140 ARG n 1 141 ARG n 1 142 TRP n 1 143 ARG n 1 144 VAL n 1 145 GLY n 1 146 ALA n 1 147 ALA n 1 148 LEU n 1 149 GLN n 1 150 MSE n 1 151 LYS n 1 152 GLN n 1 153 HIS n 1 154 CYS n 1 155 PRO n 1 156 HIS n 1 157 PRO n 1 158 ASP n 1 159 LEU n 1 160 LEU n 1 161 GLN n 1 162 VAL n 1 163 ASP n 1 164 PRO n 1 165 PHE n 1 166 GLU n 1 167 ALA n 1 168 ILE n 1 169 ILE n 1 170 ASP n 1 171 GLU n 1 172 GLU n 1 173 LEU n 1 174 GLU n 1 175 PRO n 1 176 GLY n 1 177 ASP n 1 178 ILE n 1 179 LEU n 1 180 TYR n 1 181 ILE n 1 182 PRO n 1 183 PRO n 1 184 GLY n 1 185 PHE n 1 186 PRO n 1 187 HIS n 1 188 GLU n 1 189 GLY n 1 190 TYR n 1 191 ALA n 1 192 LEU n 1 193 GLU n 1 194 ASN n 1 195 ALA n 1 196 MSE n 1 197 ASN n 1 198 TYR n 1 199 SER n 1 200 VAL n 1 201 GLY n 1 202 PHE n 1 203 ARG n 1 204 ALA n 1 205 PRO n 1 206 ASN n 1 207 THR n 1 208 ARG n 1 209 GLU n 1 210 LEU n 1 211 ILE n 1 212 SER n 1 213 GLY n 1 214 PHE n 1 215 ALA n 1 216 ASP n 1 217 TYR n 1 218 VAL n 1 219 LEU n 1 220 GLN n 1 221 ARG n 1 222 GLU n 1 223 LEU n 1 224 GLY n 1 225 GLY n 1 226 ASN n 1 227 TYR n 1 228 TYR n 1 229 SER n 1 230 ASP n 1 231 PRO n 1 232 ASP n 1 233 VAL n 1 234 PRO n 1 235 PRO n 1 236 ARG n 1 237 ALA n 1 238 HIS n 1 239 PRO n 1 240 ALA n 1 241 ASP n 1 242 VAL n 1 243 LEU n 1 244 PRO n 1 245 GLN n 1 246 GLU n 1 247 MSE n 1 248 ASP n 1 249 LYS n 1 250 LEU n 1 251 ARG n 1 252 GLU n 1 253 MSE n 1 254 MSE n 1 255 LEU n 1 256 GLU n 1 257 LEU n 1 258 ILE n 1 259 ASN n 1 260 GLN n 1 261 PRO n 1 262 GLU n 1 263 HIS n 1 264 PHE n 1 265 LYS n 1 266 GLN n 1 267 TRP n 1 268 PHE n 1 269 GLY n 1 270 GLU n 1 271 PHE n 1 272 ILE n 1 273 SER n 1 274 GLN n 1 275 SER n 1 276 ARG n 1 277 HIS n 1 278 GLU n 1 279 LEU n 1 280 ASP n 1 281 ILE n 1 282 ALA n 1 283 PRO n 1 284 PRO n 1 285 GLU n 1 286 PRO n 1 287 PRO n 1 288 TYR n 1 289 GLN n 1 290 PRO n 1 291 ASP n 1 292 GLU n 1 293 ILE n 1 294 TYR n 1 295 ASP n 1 296 ALA n 1 297 LEU n 1 298 LYS n 1 299 GLN n 1 300 GLY n 1 301 GLU n 1 302 VAL n 1 303 LEU n 1 304 VAL n 1 305 ARG n 1 306 LEU n 1 307 GLY n 1 308 GLY n 1 309 LEU n 1 310 ARG n 1 311 VAL n 1 312 LEU n 1 313 ARG n 1 314 ILE n 1 315 GLY n 1 316 ASP n 1 317 ASP n 1 318 VAL n 1 319 TYR n 1 320 ALA n 1 321 ASN n 1 322 GLY n 1 323 GLU n 1 324 LYS n 1 325 ILE n 1 326 ASP n 1 327 SER n 1 328 PRO n 1 329 HIS n 1 330 ARG n 1 331 PRO n 1 332 ALA n 1 333 LEU n 1 334 ASP n 1 335 ALA n 1 336 LEU n 1 337 ALA n 1 338 SER n 1 339 ASN n 1 340 ILE n 1 341 ALA n 1 342 LEU n 1 343 THR n 1 344 ALA n 1 345 GLU n 1 346 ASN n 1 347 PHE n 1 348 GLY n 1 349 ASP n 1 350 ALA n 1 351 LEU n 1 352 GLU n 1 353 ASP n 1 354 PRO n 1 355 SER n 1 356 PHE n 1 357 LEU n 1 358 ALA n 1 359 MSE n 1 360 LEU n 1 361 ALA n 1 362 ALA n 1 363 LEU n 1 364 VAL n 1 365 ASN n 1 366 SER n 1 367 GLY n 1 368 TYR n 1 369 TRP n 1 370 PHE n 1 371 PHE n 1 372 GLU n 1 373 GLY n 1 374 SER n 1 375 GLY n 1 376 ARG n 1 377 VAL n 1 378 GLU n 1 379 HIS n 1 380 HIS n 1 381 HIS n 1 382 HIS n 1 383 HIS n 1 384 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b1128, JW1114, ycfD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'DL41 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YCFD_ECOLI _struct_ref.pdbx_db_accession P27431 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWS LLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYA NGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NUB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 373 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P27431 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 373 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 373 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NUB ALA A 146 ? UNP P27431 GLU 146 'engineered mutation' 146 1 1 4NUB ALA A 147 ? UNP P27431 LYS 147 'engineered mutation' 147 2 1 4NUB SER A 374 ? UNP P27431 ? ? 'EXPRESSION TAG' 374 3 1 4NUB GLY A 375 ? UNP P27431 ? ? 'EXPRESSION TAG' 375 4 1 4NUB ARG A 376 ? UNP P27431 ? ? 'EXPRESSION TAG' 376 5 1 4NUB VAL A 377 ? UNP P27431 ? ? 'EXPRESSION TAG' 377 6 1 4NUB GLU A 378 ? UNP P27431 ? ? 'EXPRESSION TAG' 378 7 1 4NUB HIS A 379 ? UNP P27431 ? ? 'EXPRESSION TAG' 379 8 1 4NUB HIS A 380 ? UNP P27431 ? ? 'EXPRESSION TAG' 380 9 1 4NUB HIS A 381 ? UNP P27431 ? ? 'EXPRESSION TAG' 381 10 1 4NUB HIS A 382 ? UNP P27431 ? ? 'EXPRESSION TAG' 382 11 1 4NUB HIS A 383 ? UNP P27431 ? ? 'EXPRESSION TAG' 383 12 1 4NUB HIS A 384 ? UNP P27431 ? ? 'EXPRESSION TAG' 384 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NUB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.41 _exptl_crystal.density_percent_sol 63.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details ;3.6% PEG 4000, 30% Glycerol, 0.07M sodium acetate, 0.5 uL of 1/10 dilution of seed solution, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-09 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97913 1.0 2 0.97927 1.0 3 0.91837 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97913, 0.97927, 0.91837' # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.7 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4NUB _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 31993 _reflns.d_resolution_low 20 _reflns.pdbx_redundancy 3.6 _reflns.number_obs 31993 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.07 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details Random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4NUB _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.39 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values MLHL _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1806 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 893 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.44 _refine.ls_percent_reflns_obs 99.97 _refine.ls_R_factor_R_work 0.1781 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.700 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.1806 _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 19.926 _refine.pdbx_overall_phase_error 22.31 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2283 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 17602 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 17671 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2872 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 51 _refine_hist.number_atoms_total 2930 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 19.926 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 2977 ? 'X-RAY DIFFRACTION' f_angle_d 1.218 ? ? 4056 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.441 ? ? 1089 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.086 ? ? 418 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 541 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.7001 2.8688 2681 0.3075 100.00 0.3878 . . 170 . . . . 'X-RAY DIFFRACTION' . 2.8688 3.0895 2712 0.2598 100.00 0.2974 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.0895 3.3991 2740 0.2035 100.00 0.2444 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.3991 3.8877 2752 0.1783 100.00 0.2352 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.8877 4.8862 2845 0.1400 100.00 0.1830 . . 125 . . . . 'X-RAY DIFFRACTION' . 4.8862 19.9266 2979 0.1594 100.00 0.1964 . . 143 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4NUB _struct.title 'Crystal structure of Escherichia coli ribosomal oxygenase YcfD' _struct.pdbx_descriptor '50S ribosomal protein L16 arginine hydroxylase (E.C.1.14.11.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NUB _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, BSGI, jelly roll, cupin, beta-barrel, 2OG/Fe2+ dependent oxygenase, Ribosomal protein L-16, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'biological assembly is a dimer generated from the monomer in the asymmetric unit by the operation -y,-x,-z+1/2' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 8 ? HIS A 16 ? ASN A 8 HIS A 16 1 ? 9 HELX_P HELX_P2 2 SER A 36 ? MSE A 45 ? SER A 36 MSE A 45 1 ? 10 HELX_P HELX_P3 3 ALA A 85 ? TRP A 89 ? ALA A 85 TRP A 89 5 ? 5 HELX_P HELX_P4 4 PRO A 92 ? ARG A 101 ? PRO A 92 ARG A 101 5 ? 10 HELX_P HELX_P5 5 ASN A 206 ? ARG A 221 ? ASN A 206 ARG A 221 1 ? 16 HELX_P HELX_P6 6 LEU A 243 ? ASN A 259 ? LEU A 243 ASN A 259 1 ? 17 HELX_P HELX_P7 7 GLU A 262 ? SER A 273 ? GLU A 262 SER A 273 1 ? 12 HELX_P HELX_P8 8 GLN A 289 ? GLN A 299 ? GLN A 289 GLN A 299 1 ? 11 HELX_P HELX_P9 9 HIS A 329 ? ASN A 339 ? HIS A 329 ASN A 339 1 ? 11 HELX_P HELX_P10 10 THR A 343 ? GLU A 352 ? THR A 343 GLU A 352 5 ? 10 HELX_P HELX_P11 11 ASP A 353 ? GLY A 367 ? ASP A 353 GLY A 367 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A GLU 2 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A ALA 44 C ? ? ? 1_555 A MSE 45 N ? ? A ALA 44 A MSE 45 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A MSE 45 C ? ? ? 1_555 A GLU 46 N ? ? A MSE 45 A GLU 46 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A LEU 96 C ? ? ? 1_555 A MSE 97 N ? ? A LEU 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A MSE 97 C ? ? ? 1_555 A ARG 98 N ? ? A MSE 97 A ARG 98 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A LEU 111 C ? ? ? 1_555 A MSE 112 N ? ? A LEU 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A MSE 112 C ? ? ? 1_555 A ILE 113 N ? ? A MSE 112 A ILE 113 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A ALA 195 C ? ? ? 1_555 A MSE 196 N ? ? A ALA 195 A MSE 196 1_555 ? ? ? ? ? ? ? 1.333 ? covale9 covale ? ? A MSE 196 C ? ? ? 1_555 A ASN 197 N ? ? A MSE 196 A ASN 197 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? A GLU 246 C ? ? ? 1_555 A MSE 247 N ? ? A GLU 246 A MSE 247 1_555 ? ? ? ? ? ? ? 1.329 ? covale11 covale ? ? A MSE 247 C ? ? ? 1_555 A ASP 248 N ? ? A MSE 247 A ASP 248 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A GLU 252 C ? ? ? 1_555 A MSE 253 N ? ? A GLU 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A MSE 253 C ? ? ? 1_555 A MSE 254 N ? ? A MSE 253 A MSE 254 1_555 ? ? ? ? ? ? ? 1.326 ? covale14 covale ? ? A MSE 254 C ? ? ? 1_555 A LEU 255 N ? ? A MSE 254 A LEU 255 1_555 ? ? ? ? ? ? ? 1.329 ? covale15 covale ? ? A ALA 358 C ? ? ? 1_555 A MSE 359 N ? ? A ALA 358 A MSE 359 1_555 ? ? ? ? ? ? ? 1.331 ? covale16 covale ? ? A MSE 359 C ? ? ? 1_555 A LEU 360 N ? ? A MSE 359 A LEU 360 1_555 ? ? ? ? ? ? ? 1.334 ? metalc1 metalc ? ? A HIS 125 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 125 A FE 401 1_555 ? ? ? ? ? ? ? 2.025 ? metalc2 metalc ? ? A HIS 187 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 187 A FE 401 1_555 ? ? ? ? ? ? ? 2.184 ? metalc3 metalc ? ? A ASP 127 OD2 ? ? ? 1_555 B FE . FE ? ? A ASP 127 A FE 401 1_555 ? ? ? ? ? ? ? 2.212 ? metalc4 metalc ? ? B FE . FE ? ? ? 1_555 D HOH . O ? ? A FE 401 A HOH 513 1_555 ? ? ? ? ? ? ? 2.479 ? metalc5 metalc ? ? B FE . FE ? ? ? 1_555 D HOH . O ? ? A FE 401 A HOH 508 1_555 ? ? ? ? ? ? ? 2.568 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 66 A . ? GLY 66 A PRO 67 A ? PRO 67 A 1 -2.87 2 GLU 285 A . ? GLU 285 A PRO 286 A ? PRO 286 A 1 -7.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 3 ? C ? 3 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 22 ? LEU A 24 ? VAL A 22 LEU A 24 A 2 ILE A 178 ? ILE A 181 ? ILE A 178 ILE A 181 A 3 VAL A 131 ? GLN A 135 ? VAL A 131 GLN A 135 A 4 ALA A 195 ? PHE A 202 ? ALA A 195 PHE A 202 A 5 ILE A 108 ? SER A 116 ? ILE A 108 SER A 116 A 6 TRP A 79 ? VAL A 83 ? TRP A 79 VAL A 83 A 7 SER A 51 ? GLN A 57 ? SER A 51 GLN A 57 A 8 LYS A 60 ? HIS A 65 ? LYS A 60 HIS A 65 B 1 ILE A 169 ? LEU A 173 ? ILE A 169 LEU A 173 B 2 ARG A 140 ? VAL A 144 ? ARG A 140 VAL A 144 B 3 HIS A 187 ? ALA A 191 ? HIS A 187 ALA A 191 C 1 ALA A 341 ? LEU A 342 ? ALA A 341 LEU A 342 C 2 LEU A 303 ? ARG A 305 ? LEU A 303 ARG A 305 C 3 TRP A 369 ? PHE A 371 ? TRP A 369 PHE A 371 D 1 VAL A 311 ? ILE A 314 ? VAL A 311 ILE A 314 D 2 ASP A 317 ? ALA A 320 ? ASP A 317 ALA A 320 D 3 GLU A 323 ? ILE A 325 ? GLU A 323 ILE A 325 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 24 ? N LEU A 24 O ILE A 178 ? O ILE A 178 A 2 3 O LEU A 179 ? O LEU A 179 N ILE A 133 ? N ILE A 133 A 3 4 N ILE A 134 ? N ILE A 134 O TYR A 198 ? O TYR A 198 A 4 5 O SER A 199 ? O SER A 199 N MSE A 112 ? N MSE A 112 A 5 6 O PHE A 115 ? O PHE A 115 N LEU A 81 ? N LEU A 81 A 6 7 O SER A 80 ? O SER A 80 N VAL A 54 ? N VAL A 54 A 7 8 N LEU A 53 ? N LEU A 53 O SER A 64 ? O SER A 64 B 1 2 O GLU A 171 ? O GLU A 171 N TRP A 142 ? N TRP A 142 B 2 3 N ARG A 143 ? N ARG A 143 O GLU A 188 ? O GLU A 188 C 1 2 O LEU A 342 ? O LEU A 342 N LEU A 303 ? N LEU A 303 C 2 3 N VAL A 304 ? N VAL A 304 O PHE A 370 ? O PHE A 370 D 1 2 N LEU A 312 ? N LEU A 312 O TYR A 319 ? O TYR A 319 D 2 3 N VAL A 318 ? N VAL A 318 O ILE A 325 ? O ILE A 325 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE FE A 401' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 125 ? HIS A 125 . ? 1_555 ? 2 AC1 5 ASP A 127 ? ASP A 127 . ? 1_555 ? 3 AC1 5 HIS A 187 ? HIS A 187 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH A 508 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 513 . ? 1_555 ? 6 AC2 6 LEU A 7 ? LEU A 7 . ? 5_555 ? 7 AC2 6 ASN A 8 ? ASN A 8 . ? 5_555 ? 8 AC2 6 PHE A 12 ? PHE A 12 . ? 5_555 ? 9 AC2 6 HIS A 16 ? HIS A 16 . ? 5_555 ? 10 AC2 6 GLU A 301 ? GLU A 301 . ? 1_555 ? 11 AC2 6 GLU A 372 ? GLU A 372 . ? 1_555 ? # _database_PDB_matrix.entry_id 4NUB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NUB _atom_sites.fract_transf_matrix[1][1] 0.013205 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013205 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004742 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 MSE 45 45 45 MSE MSE A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 TRP 79 79 79 TRP TRP A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 MSE 97 97 97 MSE MSE A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 MSE 112 112 112 MSE MSE A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 TRP 142 142 142 TRP TRP A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLN 149 149 ? ? ? A . n A 1 150 MSE 150 150 ? ? ? A . n A 1 151 LYS 151 151 ? ? ? A . n A 1 152 GLN 152 152 ? ? ? A . n A 1 153 HIS 153 153 ? ? ? A . n A 1 154 CYS 154 154 ? ? ? A . n A 1 155 PRO 155 155 ? ? ? A . n A 1 156 HIS 156 156 ? ? ? A . n A 1 157 PRO 157 157 ? ? ? A . n A 1 158 ASP 158 158 ? ? ? A . n A 1 159 LEU 159 159 ? ? ? A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 HIS 187 187 187 HIS HIS A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 MSE 196 196 196 MSE MSE A . n A 1 197 ASN 197 197 197 ASN ASN A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 PHE 202 202 202 PHE PHE A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 TYR 217 217 217 TYR TYR A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 GLN 220 220 220 GLN GLN A . n A 1 221 ARG 221 221 221 ARG ARG A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ASN 226 226 226 ASN ASN A . n A 1 227 TYR 227 227 227 TYR TYR A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 ASP 232 232 232 ASP ASP A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 PRO 234 234 234 PRO PRO A . n A 1 235 PRO 235 235 235 PRO PRO A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 HIS 238 238 238 HIS HIS A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 GLU 246 246 246 GLU GLU A . n A 1 247 MSE 247 247 247 MSE MSE A . n A 1 248 ASP 248 248 248 ASP ASP A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 ARG 251 251 251 ARG ARG A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 MSE 253 253 253 MSE MSE A . n A 1 254 MSE 254 254 254 MSE MSE A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 GLU 256 256 256 GLU GLU A . n A 1 257 LEU 257 257 257 LEU LEU A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 ASN 259 259 259 ASN ASN A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 GLU 262 262 262 GLU GLU A . n A 1 263 HIS 263 263 263 HIS HIS A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 LYS 265 265 265 LYS LYS A . n A 1 266 GLN 266 266 266 GLN GLN A . n A 1 267 TRP 267 267 267 TRP TRP A . n A 1 268 PHE 268 268 268 PHE PHE A . n A 1 269 GLY 269 269 269 GLY GLY A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 PHE 271 271 271 PHE PHE A . n A 1 272 ILE 272 272 272 ILE ILE A . n A 1 273 SER 273 273 273 SER SER A . n A 1 274 GLN 274 274 274 GLN GLN A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ARG 276 276 276 ARG ARG A . n A 1 277 HIS 277 277 277 HIS HIS A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 LEU 279 279 279 LEU LEU A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 PRO 283 283 283 PRO PRO A . n A 1 284 PRO 284 284 284 PRO PRO A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 PRO 286 286 286 PRO PRO A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 TYR 288 288 288 TYR TYR A . n A 1 289 GLN 289 289 289 GLN GLN A . n A 1 290 PRO 290 290 290 PRO PRO A . n A 1 291 ASP 291 291 291 ASP ASP A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 TYR 294 294 294 TYR TYR A . n A 1 295 ASP 295 295 295 ASP ASP A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LYS 298 298 298 LYS LYS A . n A 1 299 GLN 299 299 299 GLN GLN A . n A 1 300 GLY 300 300 300 GLY GLY A . n A 1 301 GLU 301 301 301 GLU GLU A . n A 1 302 VAL 302 302 302 VAL VAL A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 VAL 304 304 304 VAL VAL A . n A 1 305 ARG 305 305 305 ARG ARG A . n A 1 306 LEU 306 306 306 LEU LEU A . n A 1 307 GLY 307 307 307 GLY GLY A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 LEU 309 309 309 LEU LEU A . n A 1 310 ARG 310 310 310 ARG ARG A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 ARG 313 313 313 ARG ARG A . n A 1 314 ILE 314 314 314 ILE ILE A . n A 1 315 GLY 315 315 315 GLY GLY A . n A 1 316 ASP 316 316 316 ASP ASP A . n A 1 317 ASP 317 317 317 ASP ASP A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 TYR 319 319 319 TYR TYR A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 ASN 321 321 321 ASN ASN A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 LYS 324 324 324 LYS LYS A . n A 1 325 ILE 325 325 325 ILE ILE A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 PRO 328 328 328 PRO PRO A . n A 1 329 HIS 329 329 329 HIS HIS A . n A 1 330 ARG 330 330 330 ARG ARG A . n A 1 331 PRO 331 331 331 PRO PRO A . n A 1 332 ALA 332 332 332 ALA ALA A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 ASP 334 334 334 ASP ASP A . n A 1 335 ALA 335 335 335 ALA ALA A . n A 1 336 LEU 336 336 336 LEU LEU A . n A 1 337 ALA 337 337 337 ALA ALA A . n A 1 338 SER 338 338 338 SER SER A . n A 1 339 ASN 339 339 339 ASN ASN A . n A 1 340 ILE 340 340 340 ILE ILE A . n A 1 341 ALA 341 341 341 ALA ALA A . n A 1 342 LEU 342 342 342 LEU LEU A . n A 1 343 THR 343 343 343 THR THR A . n A 1 344 ALA 344 344 344 ALA ALA A . n A 1 345 GLU 345 345 345 GLU GLU A . n A 1 346 ASN 346 346 346 ASN ASN A . n A 1 347 PHE 347 347 347 PHE PHE A . n A 1 348 GLY 348 348 348 GLY GLY A . n A 1 349 ASP 349 349 349 ASP ASP A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 LEU 351 351 351 LEU LEU A . n A 1 352 GLU 352 352 352 GLU GLU A . n A 1 353 ASP 353 353 353 ASP ASP A . n A 1 354 PRO 354 354 354 PRO PRO A . n A 1 355 SER 355 355 355 SER SER A . n A 1 356 PHE 356 356 356 PHE PHE A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 ALA 358 358 358 ALA ALA A . n A 1 359 MSE 359 359 359 MSE MSE A . n A 1 360 LEU 360 360 360 LEU LEU A . n A 1 361 ALA 361 361 361 ALA ALA A . n A 1 362 ALA 362 362 362 ALA ALA A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 VAL 364 364 364 VAL VAL A . n A 1 365 ASN 365 365 365 ASN ASN A . n A 1 366 SER 366 366 366 SER SER A . n A 1 367 GLY 367 367 367 GLY GLY A . n A 1 368 TYR 368 368 368 TYR TYR A . n A 1 369 TRP 369 369 369 TRP TRP A . n A 1 370 PHE 370 370 370 PHE PHE A . n A 1 371 PHE 371 371 371 PHE PHE A . n A 1 372 GLU 372 372 372 GLU GLU A . n A 1 373 GLY 373 373 ? ? ? A . n A 1 374 SER 374 374 ? ? ? A . n A 1 375 GLY 375 375 ? ? ? A . n A 1 376 ARG 376 376 ? ? ? A . n A 1 377 VAL 377 377 ? ? ? A . n A 1 378 GLU 378 378 ? ? ? A . n A 1 379 HIS 379 379 ? ? ? A . n A 1 380 HIS 380 380 ? ? ? A . n A 1 381 HIS 381 381 ? ? ? A . n A 1 382 HIS 382 382 ? ? ? A . n A 1 383 HIS 383 383 ? ? ? A . n A 1 384 HIS 384 384 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Montreal-Kingston Bacterial Structural Genomics Initiative' _pdbx_SG_project.initial_of_center BSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 401 1 FE FE A . C 3 GOL 1 402 1 GOL GOL A . D 4 HOH 1 501 1 HOH HOH A . D 4 HOH 2 502 2 HOH HOH A . D 4 HOH 3 503 3 HOH HOH A . D 4 HOH 4 504 4 HOH HOH A . D 4 HOH 5 505 5 HOH HOH A . D 4 HOH 6 506 6 HOH HOH A . D 4 HOH 7 507 7 HOH HOH A . D 4 HOH 8 508 8 HOH HOH A . D 4 HOH 9 509 9 HOH HOH A . D 4 HOH 10 510 10 HOH HOH A . D 4 HOH 11 511 11 HOH HOH A . D 4 HOH 12 512 12 HOH HOH A . D 4 HOH 13 513 13 HOH HOH A . D 4 HOH 14 514 14 HOH HOH A . D 4 HOH 15 515 15 HOH HOH A . D 4 HOH 16 516 16 HOH HOH A . D 4 HOH 17 517 17 HOH HOH A . D 4 HOH 18 518 18 HOH HOH A . D 4 HOH 19 519 19 HOH HOH A . D 4 HOH 20 520 20 HOH HOH A . D 4 HOH 21 521 21 HOH HOH A . D 4 HOH 22 522 22 HOH HOH A . D 4 HOH 23 523 23 HOH HOH A . D 4 HOH 24 524 24 HOH HOH A . D 4 HOH 25 525 25 HOH HOH A . D 4 HOH 26 526 26 HOH HOH A . D 4 HOH 27 527 27 HOH HOH A . D 4 HOH 28 528 28 HOH HOH A . D 4 HOH 29 529 29 HOH HOH A . D 4 HOH 30 530 30 HOH HOH A . D 4 HOH 31 531 31 HOH HOH A . D 4 HOH 32 532 32 HOH HOH A . D 4 HOH 33 533 33 HOH HOH A . D 4 HOH 34 534 34 HOH HOH A . D 4 HOH 35 535 35 HOH HOH A . D 4 HOH 36 536 36 HOH HOH A . D 4 HOH 37 537 37 HOH HOH A . D 4 HOH 38 538 38 HOH HOH A . D 4 HOH 39 539 39 HOH HOH A . D 4 HOH 40 540 40 HOH HOH A . D 4 HOH 41 541 41 HOH HOH A . D 4 HOH 42 542 42 HOH HOH A . D 4 HOH 43 543 43 HOH HOH A . D 4 HOH 44 544 44 HOH HOH A . D 4 HOH 45 545 45 HOH HOH A . D 4 HOH 46 546 46 HOH HOH A . D 4 HOH 47 547 47 HOH HOH A . D 4 HOH 48 548 48 HOH HOH A . D 4 HOH 49 549 49 HOH HOH A . D 4 HOH 50 550 50 HOH HOH A . D 4 HOH 51 551 51 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 45 A MSE 45 ? MET SELENOMETHIONINE 3 A MSE 97 A MSE 97 ? MET SELENOMETHIONINE 4 A MSE 112 A MSE 112 ? MET SELENOMETHIONINE 5 A MSE 196 A MSE 196 ? MET SELENOMETHIONINE 6 A MSE 247 A MSE 247 ? MET SELENOMETHIONINE 7 A MSE 253 A MSE 253 ? MET SELENOMETHIONINE 8 A MSE 254 A MSE 254 ? MET SELENOMETHIONINE 9 A MSE 359 A MSE 359 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6570 ? 1 MORE -72 ? 1 'SSA (A^2)' 31550 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 105.4490000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 125 ? A HIS 125 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 73.1 ? 2 NE2 ? A HIS 125 ? A HIS 125 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 116.2 ? 3 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 84.6 ? 4 NE2 ? A HIS 125 ? A HIS 125 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 160.6 ? 5 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 115.8 ? 6 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 82.6 ? 7 NE2 ? A HIS 125 ? A HIS 125 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 508 ? 1_555 88.4 ? 8 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 508 ? 1_555 103.8 ? 9 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 508 ? 1_555 155.4 ? 10 O ? D HOH . ? A HOH 513 ? 1_555 FE ? B FE . ? A FE 401 ? 1_555 O ? D HOH . ? A HOH 508 ? 1_555 72.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-26 2 'Structure model' 1 1 2014-04-30 3 'Structure model' 1 2 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 3.9133 14.9265 84.3808 0.1566 0.2272 0.1773 0.0822 0.0206 0.0372 0.1548 0.3824 0.6056 0.0213 -0.0631 0.0713 0.0068 0.0169 0.0096 0.0853 0.1747 -0.0775 -0.0689 -0.4677 0.0670 'X-RAY DIFFRACTION' 2 ? refined 0.6204 -0.9651 57.1806 0.2324 0.2259 0.2210 -0.1426 -0.0138 -0.0129 0.2007 0.0113 0.2468 -0.1125 0.3371 -0.0643 -0.0235 0.0616 -0.0254 -0.0584 0.2824 0.1080 -0.1799 0.1305 0.0917 'X-RAY DIFFRACTION' 3 ? refined 16.0713 24.2904 58.7946 -0.0802 0.0140 0.2055 -0.3670 0.0367 0.0518 0.1332 0.1787 0.1563 0.1131 0.0188 -0.0538 -0.1379 0.2331 -0.0599 -0.1447 0.2893 -0.0812 0.1023 -0.2415 0.2413 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 181 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 182 through 259 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 260 through 372 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 SHARP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 508 ? ? O A HOH 509 ? ? 2.11 2 1 O A HOH 509 ? ? O A HOH 513 ? ? 2.17 3 1 O A HOH 525 ? ? O A HOH 526 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 7 ? ? -171.07 138.20 2 1 HIS A 16 ? ? -122.35 -50.71 3 1 LYS A 19 ? ? -129.86 -52.42 4 1 ASP A 58 ? ? 54.95 16.88 5 1 PRO A 67 ? ? -75.41 -167.93 6 1 GLU A 69 ? ? -67.86 -71.10 7 1 ASP A 72 ? ? -126.01 -166.64 8 1 ASP A 109 ? ? -98.10 -117.38 9 1 ASP A 110 ? ? -129.38 -158.81 10 1 ASP A 232 ? ? -115.56 50.05 11 1 PRO A 287 ? ? -48.23 152.87 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 14 ? OE1 ? A GLU 14 OE1 2 1 Y 1 A GLU 14 ? OE2 ? A GLU 14 OE2 3 1 Y 1 A GLN 57 ? CD ? A GLN 57 CD 4 1 Y 1 A GLN 57 ? OE1 ? A GLN 57 OE1 5 1 Y 1 A GLN 57 ? NE2 ? A GLN 57 NE2 6 1 Y 1 A ASP 58 ? OD1 ? A ASP 58 OD1 7 1 Y 1 A ASP 58 ? OD2 ? A ASP 58 OD2 8 1 Y 1 A LYS 60 ? CG ? A LYS 60 CG 9 1 Y 1 A LYS 60 ? CD ? A LYS 60 CD 10 1 Y 1 A LYS 60 ? CE ? A LYS 60 CE 11 1 Y 1 A LYS 60 ? NZ ? A LYS 60 NZ 12 1 Y 1 A GLN 62 ? OE1 ? A GLN 62 OE1 13 1 Y 1 A GLN 62 ? NE2 ? A GLN 62 NE2 14 1 Y 1 A GLU 69 ? CG ? A GLU 69 CG 15 1 Y 1 A GLU 69 ? CD ? A GLU 69 CD 16 1 Y 1 A GLU 69 ? OE1 ? A GLU 69 OE1 17 1 Y 1 A GLU 69 ? OE2 ? A GLU 69 OE2 18 1 Y 1 A HIS 73 ? CG ? A HIS 73 CG 19 1 Y 1 A HIS 73 ? ND1 ? A HIS 73 ND1 20 1 Y 1 A HIS 73 ? CD2 ? A HIS 73 CD2 21 1 Y 1 A HIS 73 ? CE1 ? A HIS 73 CE1 22 1 Y 1 A HIS 73 ? NE2 ? A HIS 73 NE2 23 1 Y 1 A GLN 128 ? OE1 ? A GLN 128 OE1 24 1 Y 1 A LEU 160 ? CG ? A LEU 160 CG 25 1 Y 1 A LEU 160 ? CD1 ? A LEU 160 CD1 26 1 Y 1 A LEU 160 ? CD2 ? A LEU 160 CD2 27 1 Y 1 A GLU 166 ? CG ? A GLU 166 CG 28 1 Y 1 A GLU 166 ? CD ? A GLU 166 CD 29 1 Y 1 A GLU 166 ? OE1 ? A GLU 166 OE1 30 1 Y 1 A GLU 166 ? OE2 ? A GLU 166 OE2 31 1 Y 1 A GLN 220 ? CD ? A GLN 220 CD 32 1 Y 1 A GLN 220 ? OE1 ? A GLN 220 OE1 33 1 Y 1 A GLN 220 ? NE2 ? A GLN 220 NE2 34 1 Y 1 A ASP 326 ? CG ? A ASP 326 CG 35 1 Y 1 A ASP 326 ? OD1 ? A ASP 326 OD1 36 1 Y 1 A ASP 326 ? OD2 ? A ASP 326 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 149 ? A GLN 149 2 1 Y 1 A MSE 150 ? A MSE 150 3 1 Y 1 A LYS 151 ? A LYS 151 4 1 Y 1 A GLN 152 ? A GLN 152 5 1 Y 1 A HIS 153 ? A HIS 153 6 1 Y 1 A CYS 154 ? A CYS 154 7 1 Y 1 A PRO 155 ? A PRO 155 8 1 Y 1 A HIS 156 ? A HIS 156 9 1 Y 1 A PRO 157 ? A PRO 157 10 1 Y 1 A ASP 158 ? A ASP 158 11 1 Y 1 A LEU 159 ? A LEU 159 12 1 Y 1 A GLY 373 ? A GLY 373 13 1 Y 1 A SER 374 ? A SER 374 14 1 Y 1 A GLY 375 ? A GLY 375 15 1 Y 1 A ARG 376 ? A ARG 376 16 1 Y 1 A VAL 377 ? A VAL 377 17 1 Y 1 A GLU 378 ? A GLU 378 18 1 Y 1 A HIS 379 ? A HIS 379 19 1 Y 1 A HIS 380 ? A HIS 380 20 1 Y 1 A HIS 381 ? A HIS 381 21 1 Y 1 A HIS 382 ? A HIS 382 22 1 Y 1 A HIS 383 ? A HIS 383 23 1 Y 1 A HIS 384 ? A HIS 384 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 GLYCEROL GOL 4 water HOH #