HEADER PROTEIN TRANSPORT 29-DEC-13 4O8Q TITLE CRYSTAL STRUCTURE OF BOVINE MHD DOMAIN OF THE COPI DELTA SUBUNIT AT TITLE 2 2.15 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: COATOMER SUBUNIT DELTA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MHD; COMPND 5 SYNONYM: ARCHAIN, DELTA-COAT PROTEIN, DELTA-COP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: ARCN1, COPD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PKM260 KEYWDS MHD, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.LAHAV,H.ROZENBERG,D.CASSEL,N.ADIR REVDAT 5 03-APR-24 4O8Q 1 REMARK REVDAT 4 28-FEB-24 4O8Q 1 REMARK SEQADV REVDAT 3 24-JUN-15 4O8Q 1 JRNL REVDAT 2 10-JUN-15 4O8Q 1 JRNL REVDAT 1 07-JAN-15 4O8Q 0 JRNL AUTH A.LAHAV,H.ROZENBERG,A.PARNIS,D.CASSEL,N.ADIR JRNL TITL STRUCTURE OF THE BOVINE COPI DELTA SUBUNIT MU HOMOLOGY JRNL TITL 2 DOMAIN AT 2.15 ANGSTROM RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1328 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 26057672 JRNL DOI 10.1107/S1399004715006203 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1565) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.7 REMARK 3 NUMBER OF REFLECTIONS : 33217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.650 REMARK 3 FREE R VALUE TEST SET COUNT : 1546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8898 - 4.7617 0.91 3193 156 0.1756 0.2068 REMARK 3 2 4.7617 - 3.7880 0.96 3199 155 0.1439 0.1805 REMARK 3 3 3.7880 - 3.3117 0.94 3113 151 0.1600 0.2101 REMARK 3 4 3.3117 - 3.0100 0.93 3030 147 0.2053 0.2636 REMARK 3 5 3.0100 - 2.7949 0.91 2986 145 0.2186 0.2513 REMARK 3 6 2.7949 - 2.6305 0.89 2900 140 0.2118 0.2731 REMARK 3 7 2.6305 - 2.4990 0.88 2858 140 0.2198 0.2647 REMARK 3 8 2.4990 - 2.3904 0.83 2684 129 0.2114 0.2650 REMARK 3 9 2.3904 - 2.2986 0.83 2667 136 0.2134 0.2888 REMARK 3 10 2.2986 - 2.2193 0.80 2561 127 0.1963 0.2594 REMARK 3 11 2.2193 - 2.1500 0.76 2480 120 0.2089 0.3158 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3900 REMARK 3 ANGLE : 1.159 5300 REMARK 3 CHIRALITY : 0.046 606 REMARK 3 PLANARITY : 0.004 700 REMARK 3 DIHEDRAL : 14.437 1457 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8520 85.4224 88.9941 REMARK 3 T TENSOR REMARK 3 T11: 0.2636 T22: 0.2267 REMARK 3 T33: 0.2433 T12: 0.0248 REMARK 3 T13: -0.0431 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.3290 L22: 0.7017 REMARK 3 L33: 1.5524 L12: 0.6109 REMARK 3 L13: -0.4066 L23: 0.1865 REMARK 3 S TENSOR REMARK 3 S11: 0.0880 S12: -0.1264 S13: -0.0917 REMARK 3 S21: 0.3677 S22: -0.0397 S23: -0.4928 REMARK 3 S31: 0.0518 S32: -0.0852 S33: 0.0037 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2702 80.2361 72.7632 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: 0.1875 REMARK 3 T33: 0.1711 T12: 0.0130 REMARK 3 T13: 0.0122 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 1.5466 L22: 1.3460 REMARK 3 L33: 1.6169 L12: -0.1681 REMARK 3 L13: 0.3051 L23: -0.9561 REMARK 3 S TENSOR REMARK 3 S11: -0.1198 S12: 0.0843 S13: -0.0767 REMARK 3 S21: -0.2061 S22: 0.0257 S23: 0.0394 REMARK 3 S31: 0.1081 S32: -0.1692 S33: -0.0215 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 352 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5287 92.7922 90.7454 REMARK 3 T TENSOR REMARK 3 T11: 0.2147 T22: 0.1853 REMARK 3 T33: 0.2024 T12: 0.0561 REMARK 3 T13: -0.0929 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 0.3629 L22: 1.4333 REMARK 3 L33: 1.8732 L12: 0.6205 REMARK 3 L13: -0.4099 L23: 1.1797 REMARK 3 S TENSOR REMARK 3 S11: 0.1173 S12: -0.0183 S13: 0.0134 REMARK 3 S21: -0.2963 S22: -0.1940 S23: 0.0222 REMARK 3 S31: -0.5142 S32: 0.0018 S33: -0.2805 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 389 THROUGH 441 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4769 94.4394 112.0638 REMARK 3 T TENSOR REMARK 3 T11: 0.2450 T22: 0.2320 REMARK 3 T33: 0.2590 T12: -0.0358 REMARK 3 T13: -0.0188 T23: -0.1085 REMARK 3 L TENSOR REMARK 3 L11: 1.2742 L22: 1.9570 REMARK 3 L33: 1.3756 L12: -0.9088 REMARK 3 L13: 0.0093 L23: -0.9468 REMARK 3 S TENSOR REMARK 3 S11: 0.1385 S12: -0.0212 S13: -0.2280 REMARK 3 S21: -0.2001 S22: -0.0407 S23: 0.1822 REMARK 3 S31: 0.0289 S32: -0.0312 S33: -0.0103 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 442 THROUGH 480 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1788 94.7607 105.7700 REMARK 3 T TENSOR REMARK 3 T11: 0.2984 T22: 0.3328 REMARK 3 T33: 0.3311 T12: -0.0663 REMARK 3 T13: 0.0159 T23: -0.1271 REMARK 3 L TENSOR REMARK 3 L11: 0.3869 L22: 0.3270 REMARK 3 L33: 0.8099 L12: 0.1556 REMARK 3 L13: 0.2932 L23: -0.3884 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: 0.1947 S13: -0.0137 REMARK 3 S21: -0.1281 S22: 0.0542 S23: 0.1485 REMARK 3 S31: -0.1133 S32: -0.2167 S33: 0.1055 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 481 THROUGH 511 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9939 80.0325 85.3057 REMARK 3 T TENSOR REMARK 3 T11: 0.2824 T22: 0.2222 REMARK 3 T33: 0.2064 T12: -0.0300 REMARK 3 T13: -0.0131 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 0.3607 L22: 0.6008 REMARK 3 L33: 0.9846 L12: 0.1488 REMARK 3 L13: -0.6512 L23: -0.2382 REMARK 3 S TENSOR REMARK 3 S11: 0.0648 S12: -0.1687 S13: 0.0202 REMARK 3 S21: 0.3097 S22: -0.2171 S23: 0.3357 REMARK 3 S31: 0.2302 S32: -0.3593 S33: 0.0325 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 270 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6267 60.1631 110.1341 REMARK 3 T TENSOR REMARK 3 T11: 0.2954 T22: 0.2820 REMARK 3 T33: 0.2817 T12: 0.0279 REMARK 3 T13: 0.0078 T23: 0.0752 REMARK 3 L TENSOR REMARK 3 L11: 2.2140 L22: 1.0369 REMARK 3 L33: 1.3681 L12: -0.6968 REMARK 3 L13: -1.2247 L23: -0.1030 REMARK 3 S TENSOR REMARK 3 S11: 0.1648 S12: 0.0608 S13: -0.1480 REMARK 3 S21: -0.0891 S22: -0.2175 S23: -0.0758 REMARK 3 S31: -0.0367 S32: 0.1651 S33: -0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 369 THROUGH 471 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2798 82.3742 128.6651 REMARK 3 T TENSOR REMARK 3 T11: 0.2129 T22: 0.3262 REMARK 3 T33: 0.2473 T12: -0.0478 REMARK 3 T13: -0.0075 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.5103 L22: 3.4521 REMARK 3 L33: 0.5748 L12: -1.8054 REMARK 3 L13: 0.4875 L23: -0.1293 REMARK 3 S TENSOR REMARK 3 S11: -0.1403 S12: -0.3421 S13: 0.1382 REMARK 3 S21: 0.2652 S22: 0.0964 S23: -0.3073 REMARK 3 S31: 0.0460 S32: 0.0180 S33: -0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 472 THROUGH 511 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5174 68.0152 111.4358 REMARK 3 T TENSOR REMARK 3 T11: 0.3726 T22: 0.3495 REMARK 3 T33: 0.4518 T12: -0.0413 REMARK 3 T13: 0.0616 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.6749 L22: 0.5728 REMARK 3 L33: 0.1783 L12: -0.5243 REMARK 3 L13: -0.1506 L23: -0.2097 REMARK 3 S TENSOR REMARK 3 S11: 0.1839 S12: -0.1728 S13: 0.1973 REMARK 3 S21: -0.0308 S22: -0.1225 S23: -0.1349 REMARK 3 S31: -0.0112 S32: 0.1547 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O8Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-13; 07-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5; 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ESRF; ESRF REMARK 200 BEAMLINE : ID14-4; ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791; 0.9394 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) OR REMARK 200 SI(311); DOUBLE CRYSTAL, SI(111) REMARK 200 OR SI(311) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; ADSC QUANTUM REMARK 200 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43300 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 28.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48700 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR-SAD REMARK 200 SOFTWARE USED: PHASER (PHENIX) REMARK 200 STARTING MODEL: FROM INITIAL SAD EXPERIMENT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM CITRATE TRIBASIC REMARK 280 DEHYDRATE, 20% PEG 3350, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K. 0.4M NACL, 0.1M HEPES 7.5, 18% PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.04600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.89700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.16650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.89700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.04600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.16650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 385 REMARK 465 GLY A 386 REMARK 465 ASN A 387 REMARK 465 SER B 267 REMARK 465 PRO B 268 REMARK 465 ILE B 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 370 CG CD OE1 OE2 REMARK 470 GLU A 399 CD OE1 OE2 REMARK 470 ASP A 400 CG OD1 OD2 REMARK 470 ASP A 446 OD1 OD2 REMARK 470 LYS A 448 CB CG CD CE NZ REMARK 470 LYS A 476 CG CD CE NZ REMARK 470 ASN B 270 CG OD1 ND2 REMARK 470 ASP B 289 CG OD1 OD2 REMARK 470 GLU B 320 CG CD OE1 OE2 REMARK 470 ASP B 321 OD1 OD2 REMARK 470 LYS B 322 CG CD CE NZ REMARK 470 LYS B 323 CD CE NZ REMARK 470 LYS B 336 CD CE NZ REMARK 470 LYS B 351 CG CD CE NZ REMARK 470 GLU B 370 CG CD OE1 OE2 REMARK 470 TRP B 381 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 381 CZ3 CH2 REMARK 470 ASN B 387 CG OD1 ND2 REMARK 470 GLU B 399 CG CD OE1 OE2 REMARK 470 ASP B 400 CG OD1 OD2 REMARK 470 LYS B 448 CG CD CE NZ REMARK 470 GLN B 461 CG CD OE1 NE2 REMARK 470 ARG B 496 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 442 -157.00 68.38 REMARK 500 ILE A 458 149.36 -171.72 REMARK 500 ASP B 321 -119.76 47.19 REMARK 500 LYS B 322 -3.53 64.80 REMARK 500 ASN B 387 31.23 -90.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 601 DBREF 4O8Q A 268 511 UNP P53619 COPD_BOVIN 268 511 DBREF 4O8Q B 268 511 UNP P53619 COPD_BOVIN 268 511 SEQADV 4O8Q SER A 267 UNP P53619 EXPRESSION TAG SEQADV 4O8Q SER B 267 UNP P53619 EXPRESSION TAG SEQRES 1 A 245 SER PRO ILE ASN MET GLU SER VAL HIS MET LYS ILE GLU SEQRES 2 A 245 GLU LYS ILE THR LEU THR CYS GLY ARG ASP GLY GLY LEU SEQRES 3 A 245 GLN ASN MET GLU LEU HIS GLY MET ILE MET LEU ARG ILE SEQRES 4 A 245 SER ASP ASP LYS PHE GLY ARG ILE ARG LEU HIS VAL GLU SEQRES 5 A 245 ASN GLU ASP LYS LYS GLY VAL GLN LEU GLN THR HIS PRO SEQRES 6 A 245 ASN VAL ASP LYS LYS LEU PHE THR ALA GLU SER LEU ILE SEQRES 7 A 245 GLY LEU LYS ASN PRO GLU LYS SER PHE PRO VAL ASN SER SEQRES 8 A 245 ASP VAL GLY VAL LEU LYS TRP ARG LEU GLN THR THR GLU SEQRES 9 A 245 GLU SER PHE ILE PRO LEU THR ILE ASN CYS TRP PRO SER SEQRES 10 A 245 GLU SER GLY ASN GLY CYS ASP VAL ASN ILE GLU TYR GLU SEQRES 11 A 245 LEU GLN GLU ASP ASN LEU GLU LEU ASN ASP VAL VAL ILE SEQRES 12 A 245 THR ILE PRO LEU PRO SER GLY VAL GLY ALA PRO VAL ILE SEQRES 13 A 245 GLY GLU ILE ASP GLY GLU TYR ARG HIS ASP SER ARG ARG SEQRES 14 A 245 ASN THR LEU GLU TRP CYS LEU PRO VAL ILE ASP ALA LYS SEQRES 15 A 245 ASN LYS SER GLY SER LEU GLU PHE SER ILE ALA GLY GLN SEQRES 16 A 245 PRO ASN ASP PHE PHE PRO VAL GLN VAL SER PHE ILE SER SEQRES 17 A 245 LYS LYS ASN TYR CYS ASN ILE GLN VAL THR LYS VAL THR SEQRES 18 A 245 GLN VAL ASP GLY ASN SER PRO VAL ARG PHE SER THR GLU SEQRES 19 A 245 THR THR PHE LEU VAL ASP LYS TYR GLU ILE LEU SEQRES 1 B 245 SER PRO ILE ASN MET GLU SER VAL HIS MET LYS ILE GLU SEQRES 2 B 245 GLU LYS ILE THR LEU THR CYS GLY ARG ASP GLY GLY LEU SEQRES 3 B 245 GLN ASN MET GLU LEU HIS GLY MET ILE MET LEU ARG ILE SEQRES 4 B 245 SER ASP ASP LYS PHE GLY ARG ILE ARG LEU HIS VAL GLU SEQRES 5 B 245 ASN GLU ASP LYS LYS GLY VAL GLN LEU GLN THR HIS PRO SEQRES 6 B 245 ASN VAL ASP LYS LYS LEU PHE THR ALA GLU SER LEU ILE SEQRES 7 B 245 GLY LEU LYS ASN PRO GLU LYS SER PHE PRO VAL ASN SER SEQRES 8 B 245 ASP VAL GLY VAL LEU LYS TRP ARG LEU GLN THR THR GLU SEQRES 9 B 245 GLU SER PHE ILE PRO LEU THR ILE ASN CYS TRP PRO SER SEQRES 10 B 245 GLU SER GLY ASN GLY CYS ASP VAL ASN ILE GLU TYR GLU SEQRES 11 B 245 LEU GLN GLU ASP ASN LEU GLU LEU ASN ASP VAL VAL ILE SEQRES 12 B 245 THR ILE PRO LEU PRO SER GLY VAL GLY ALA PRO VAL ILE SEQRES 13 B 245 GLY GLU ILE ASP GLY GLU TYR ARG HIS ASP SER ARG ARG SEQRES 14 B 245 ASN THR LEU GLU TRP CYS LEU PRO VAL ILE ASP ALA LYS SEQRES 15 B 245 ASN LYS SER GLY SER LEU GLU PHE SER ILE ALA GLY GLN SEQRES 16 B 245 PRO ASN ASP PHE PHE PRO VAL GLN VAL SER PHE ILE SER SEQRES 17 B 245 LYS LYS ASN TYR CYS ASN ILE GLN VAL THR LYS VAL THR SEQRES 18 B 245 GLN VAL ASP GLY ASN SER PRO VAL ARG PHE SER THR GLU SEQRES 19 B 245 THR THR PHE LEU VAL ASP LYS TYR GLU ILE LEU HET FMT A 601 3 HETNAM FMT FORMIC ACID FORMUL 3 FMT C H2 O2 FORMUL 4 HOH *229(H2 O) HELIX 1 1 SER A 267 MET A 271 5 5 HELIX 2 2 ASP A 307 GLY A 311 5 5 HELIX 3 3 ASP A 334 SER A 342 1 9 HELIX 4 4 GLU A 370 ILE A 374 5 5 HELIX 5 5 GLN A 461 PHE A 466 5 6 HELIX 6 6 ASP B 307 GLY B 311 5 5 HELIX 7 7 ASP B 334 SER B 342 1 9 HELIX 8 8 GLU B 370 ILE B 374 5 5 HELIX 9 9 ASP B 446 ASN B 449 5 4 HELIX 10 10 GLN B 461 PHE B 466 5 6 SHEET 1 A 9 GLN A 326 THR A 329 0 SHEET 2 A 9 VAL A 359 THR A 368 -1 O LYS A 363 N GLN A 328 SHEET 3 A 9 LEU A 292 ILE A 305 -1 N LEU A 297 O LEU A 366 SHEET 4 A 9 VAL A 274 CYS A 286 -1 N LYS A 277 O MET A 302 SHEET 5 A 9 SER A 498 ILE A 510 1 O GLU A 500 N ILE A 278 SHEET 6 A 9 VAL A 468 SER A 474 -1 N VAL A 468 O ILE A 510 SHEET 7 A 9 LEU A 404 PRO A 412 -1 N THR A 410 O GLN A 469 SHEET 8 A 9 THR A 437 CYS A 441 -1 O TRP A 440 N ILE A 409 SHEET 9 A 9 GLU A 428 ASP A 432 -1 N ARG A 430 O GLU A 439 SHEET 1 B 3 LEU A 343 ILE A 344 0 SHEET 2 B 3 ILE A 313 ASN A 319 -1 N LEU A 315 O ILE A 344 SHEET 3 B 3 ILE A 481 GLN A 488 -1 O GLN A 482 N GLU A 318 SHEET 1 C 4 LEU A 376 SER A 383 0 SHEET 2 C 4 CYS A 389 LEU A 397 -1 O ASN A 392 N TRP A 381 SHEET 3 C 4 SER A 451 ILE A 458 -1 O PHE A 456 N VAL A 391 SHEET 4 C 4 VAL A 421 ILE A 425 -1 N GLY A 423 O GLU A 455 SHEET 1 D 9 GLN B 326 THR B 329 0 SHEET 2 D 9 VAL B 359 THR B 368 -1 O LYS B 363 N GLN B 328 SHEET 3 D 9 LEU B 292 ILE B 305 -1 N MET B 295 O THR B 368 SHEET 4 D 9 VAL B 274 GLY B 287 -1 N LYS B 277 O MET B 302 SHEET 5 D 9 SER B 498 LEU B 511 1 O LEU B 511 N CYS B 286 SHEET 6 D 9 VAL B 468 SER B 474 -1 N SER B 474 O PHE B 503 SHEET 7 D 9 LEU B 404 PRO B 412 -1 N THR B 410 O GLN B 469 SHEET 8 D 9 THR B 437 ILE B 445 -1 O TRP B 440 N ILE B 409 SHEET 9 D 9 GLU B 428 ASP B 432 -1 N ARG B 430 O GLU B 439 SHEET 1 E 3 LEU B 343 ILE B 344 0 SHEET 2 E 3 ILE B 313 ASN B 319 -1 N LEU B 315 O ILE B 344 SHEET 3 E 3 ILE B 481 GLN B 488 -1 O LYS B 485 N HIS B 316 SHEET 1 F 4 LEU B 376 GLU B 384 0 SHEET 2 F 4 CYS B 389 LEU B 397 -1 O ASN B 392 N TRP B 381 SHEET 3 F 4 SER B 451 ILE B 458 -1 O LEU B 454 N ILE B 393 SHEET 4 F 4 VAL B 421 ILE B 425 -1 N GLY B 423 O GLU B 455 CISPEP 1 LEU A 442 PRO A 443 0 -6.99 CISPEP 2 PHE A 466 PRO A 467 0 1.21 CISPEP 3 PHE B 466 PRO B 467 0 -2.25 SITE 1 AC1 4 ASN A 463 PHE A 466 HOH A 729 GLU B 341 CRYST1 42.092 110.333 145.794 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023757 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009063 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006859 0.00000