data_4O9G # _entry.id 4O9G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4O9G pdb_00004o9g 10.2210/pdb4o9g/pdb RCSB RCSB084209 ? ? WWPDB D_1000084209 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4O9E _pdbx_database_related.details 'Wild-type version of the protein in complex with TDP' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4O9G _pdbx_database_status.recvd_initial_deposition_date 2014-01-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thoden, J.B.' 1 'Holden, H.M.' 2 # _citation.id primary _citation.title 'The molecular architecture of QdtA, a sugar 3,4-ketoisomerase from Thermoanaerobacterium thermosaccharolyticum.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 23 _citation.page_first 683 _citation.page_last 692 _citation.year 2014 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24616215 _citation.pdbx_database_id_DOI 10.1002/pro.2451 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thoden, J.B.' 1 ? primary 'Holden, H.M.' 2 ? # _cell.entry_id 4O9G _cell.length_a 95.396 _cell.length_b 95.396 _cell.length_c 94.643 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4O9G _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man QdtA 17141.775 2 ? H51N ? ? 2 non-polymer syn dTDP-4-keto-6-deoxyglucose 546.314 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn '(2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol' 368.463 1 ? ? ? ? 5 water nat water 18.015 173 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 3,4-ketoisomerase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLYNVALIKFKDIADKYGHLTPIEGKIDIPFDIKRVYYITKVDKDITRGYNSHKKLHQVLICLNGSVKIRLKIPDEEKII ELNDPSVGLYIGPLVWREMFDFTEGCVLLVLASEYYDETDYIRNYDFYIDEAKKRFLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLYNVALIKFKDIADKYGHLTPIEGKIDIPFDIKRVYYITKVDKDITRGYNSHKKLHQVLICLNGSVKIRLKIPDEEKII ELNDPSVGLYIGPLVWREMFDFTEGCVLLVLASEYYDETDYIRNYDFYIDEAKKRFLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 TYR n 1 4 ASN n 1 5 VAL n 1 6 ALA n 1 7 LEU n 1 8 ILE n 1 9 LYS n 1 10 PHE n 1 11 LYS n 1 12 ASP n 1 13 ILE n 1 14 ALA n 1 15 ASP n 1 16 LYS n 1 17 TYR n 1 18 GLY n 1 19 HIS n 1 20 LEU n 1 21 THR n 1 22 PRO n 1 23 ILE n 1 24 GLU n 1 25 GLY n 1 26 LYS n 1 27 ILE n 1 28 ASP n 1 29 ILE n 1 30 PRO n 1 31 PHE n 1 32 ASP n 1 33 ILE n 1 34 LYS n 1 35 ARG n 1 36 VAL n 1 37 TYR n 1 38 TYR n 1 39 ILE n 1 40 THR n 1 41 LYS n 1 42 VAL n 1 43 ASP n 1 44 LYS n 1 45 ASP n 1 46 ILE n 1 47 THR n 1 48 ARG n 1 49 GLY n 1 50 TYR n 1 51 ASN n 1 52 SER n 1 53 HIS n 1 54 LYS n 1 55 LYS n 1 56 LEU n 1 57 HIS n 1 58 GLN n 1 59 VAL n 1 60 LEU n 1 61 ILE n 1 62 CYS n 1 63 LEU n 1 64 ASN n 1 65 GLY n 1 66 SER n 1 67 VAL n 1 68 LYS n 1 69 ILE n 1 70 ARG n 1 71 LEU n 1 72 LYS n 1 73 ILE n 1 74 PRO n 1 75 ASP n 1 76 GLU n 1 77 GLU n 1 78 LYS n 1 79 ILE n 1 80 ILE n 1 81 GLU n 1 82 LEU n 1 83 ASN n 1 84 ASP n 1 85 PRO n 1 86 SER n 1 87 VAL n 1 88 GLY n 1 89 LEU n 1 90 TYR n 1 91 ILE n 1 92 GLY n 1 93 PRO n 1 94 LEU n 1 95 VAL n 1 96 TRP n 1 97 ARG n 1 98 GLU n 1 99 MET n 1 100 PHE n 1 101 ASP n 1 102 PHE n 1 103 THR n 1 104 GLU n 1 105 GLY n 1 106 CYS n 1 107 VAL n 1 108 LEU n 1 109 LEU n 1 110 VAL n 1 111 LEU n 1 112 ALA n 1 113 SER n 1 114 GLU n 1 115 TYR n 1 116 TYR n 1 117 ASP n 1 118 GLU n 1 119 THR n 1 120 ASP n 1 121 TYR n 1 122 ILE n 1 123 ARG n 1 124 ASN n 1 125 TYR n 1 126 ASP n 1 127 PHE n 1 128 TYR n 1 129 ILE n 1 130 ASP n 1 131 GLU n 1 132 ALA n 1 133 LYS n 1 134 LYS n 1 135 ARG n 1 136 PHE n 1 137 LEU n 1 138 GLU n 1 139 HIS n 1 140 HIS n 1 141 HIS n 1 142 HIS n 1 143 HIS n 1 144 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene qdtA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain E207-71 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoanaerobacterium thermosaccharolyticum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1517 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET31 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6TFC5_THETR _struct_ref.pdbx_db_accession Q6TFC5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLYNVALIKFKDIADKYGHLTPIEGKIDIPFDIKRVYYITKVDKDITRGYHAHKKLHQVLICLNGSVKIRLKIPDEEKII ELNDPSVGLYIGPFLWREMFDFTEGCVLLVLASEYCDETDYIRNYDFYIDEAKKRF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4O9G A 1 ? 136 ? Q6TFC5 1 ? 136 ? 1 136 2 1 4O9G B 1 ? 136 ? Q6TFC5 1 ? 136 ? 1 136 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4O9G ASN A 51 ? UNP Q6TFC5 HIS 51 'engineered mutation' 51 1 1 4O9G SER A 52 ? UNP Q6TFC5 ALA 52 'SEE REMARK 999' 52 2 1 4O9G LEU A 94 ? UNP Q6TFC5 PHE 94 'SEE REMARK 999' 94 3 1 4O9G VAL A 95 ? UNP Q6TFC5 LEU 95 'SEE REMARK 999' 95 4 1 4O9G TYR A 116 ? UNP Q6TFC5 CYS 116 'SEE REMARK 999' 116 5 1 4O9G LEU A 137 ? UNP Q6TFC5 ? ? 'expression tag' 137 6 1 4O9G GLU A 138 ? UNP Q6TFC5 ? ? 'expression tag' 138 7 1 4O9G HIS A 139 ? UNP Q6TFC5 ? ? 'expression tag' 139 8 1 4O9G HIS A 140 ? UNP Q6TFC5 ? ? 'expression tag' 140 9 1 4O9G HIS A 141 ? UNP Q6TFC5 ? ? 'expression tag' 141 10 1 4O9G HIS A 142 ? UNP Q6TFC5 ? ? 'expression tag' 142 11 1 4O9G HIS A 143 ? UNP Q6TFC5 ? ? 'expression tag' 143 12 1 4O9G HIS A 144 ? UNP Q6TFC5 ? ? 'expression tag' 144 13 2 4O9G ASN B 51 ? UNP Q6TFC5 HIS 51 'engineered mutation' 51 14 2 4O9G SER B 52 ? UNP Q6TFC5 ALA 52 'SEE REMARK 999' 52 15 2 4O9G LEU B 94 ? UNP Q6TFC5 PHE 94 'SEE REMARK 999' 94 16 2 4O9G VAL B 95 ? UNP Q6TFC5 LEU 95 'SEE REMARK 999' 95 17 2 4O9G TYR B 116 ? UNP Q6TFC5 CYS 116 'SEE REMARK 999' 116 18 2 4O9G LEU B 137 ? UNP Q6TFC5 ? ? 'expression tag' 137 19 2 4O9G GLU B 138 ? UNP Q6TFC5 ? ? 'expression tag' 138 20 2 4O9G HIS B 139 ? UNP Q6TFC5 ? ? 'expression tag' 139 21 2 4O9G HIS B 140 ? UNP Q6TFC5 ? ? 'expression tag' 140 22 2 4O9G HIS B 141 ? UNP Q6TFC5 ? ? 'expression tag' 141 23 2 4O9G HIS B 142 ? UNP Q6TFC5 ? ? 'expression tag' 142 24 2 4O9G HIS B 143 ? UNP Q6TFC5 ? ? 'expression tag' 143 25 2 4O9G HIS B 144 ? UNP Q6TFC5 ? ? 'expression tag' 144 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4TD non-polymer . '(2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol' 'tetraerythritol propoxylate' 'C17 H36 O8' 368.463 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 T46 non-polymer . dTDP-4-keto-6-deoxyglucose ? 'C16 H24 N2 O15 P2' 546.314 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4O9G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_percent_sol 60.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '28-33% pentaerythritol propoxylate, 100 mM HEPPS, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details 'Montel mirrors' _diffrn_detector.type 'Bruker Platinum 135' _diffrn_detector.pdbx_collection_date 2013-11-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni filter' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.9 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 14.9 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4O9G _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 95.7 _reflns.pdbx_Rsym_value 0.079 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 33577 _reflns.d_resolution_low 50.0 _reflns.pdbx_redundancy 7.7 _reflns.number_obs 33577 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 2.0 _reflns_shell.percent_possible_all 87.1 _reflns_shell.Rmerge_I_obs 0.374 _reflns_shell.pdbx_Rsym_value 0.374 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4259 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.1 _refine.overall_SU_B 3.818 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4O9G _refine.aniso_B[2][3] 0.00 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.107 _refine.aniso_B[1][3] 0.00 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.aniso_B[3][3] -0.85 _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] 0.42 _refine.pdbx_overall_ESU_R 0.136 _refine.ls_R_factor_obs 0.20258 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_starting_model 'PDB entry 4O9E' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.ls_number_reflns_R_free 1701 _refine.correlation_coeff_Fo_to_Fc_free 0.930 _refine.pdbx_ls_sigma_F 0 _refine.ls_percent_reflns_obs 95.75 _refine.ls_R_factor_R_work 0.20053 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.90 _refine.pdbx_overall_ESU_R_Free 0.135 _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 28.137 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.203 _refine.aniso_B[2][2] 0.42 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I 0 _refine.ls_d_res_low 29.97 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details MASK _refine.aniso_B[1][2] 0.00 _refine.ls_R_factor_R_free 0.24078 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 31868 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 33577 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2300 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 99 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 2572 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 29.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.009 0.019 ? 2473 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.000 0.020 ? 2384 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.347 2.024 ? 3352 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.598 3.000 ? 5512 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 8.100 5.000 ? 278 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.832 24.035 ? 114 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.371 15.000 ? 444 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.355 15.000 ? 12 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.080 0.200 ? 371 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.006 0.020 ? 2616 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.000 0.020 ? 534 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 2051 _refine_ls_shell.R_factor_R_work 0.317 _refine_ls_shell.percent_reflns_obs 84.92 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4O9G _struct.title ;Crystal structure of the H51N mutant of the 3,4-ketoisomerase QdtA from Thermoanaerobacterium thermosaccharolyticum in complex with TDP-4-keto-6-deoxyglucose ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4O9G _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'cupin, 3, 4-ketoisomerase, TDP-sugar binding, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details 'Biologic dimer is composed of chains A+B' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 117 ? THR A 119 ? ASP A 117 THR A 119 5 ? 3 HELX_P HELX_P2 2 ASN A 124 ? LEU A 137 ? ASN A 124 LEU A 137 1 ? 14 HELX_P HELX_P3 3 ASP B 117 ? THR B 119 ? ASP B 117 THR B 119 5 ? 3 HELX_P HELX_P4 4 ASN B 124 ? LEU B 137 ? ASN B 124 LEU B 137 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 5 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? LYS A 9 ? VAL A 5 LYS A 9 A 2 VAL A 87 ? ILE A 91 ? VAL A 87 ILE A 91 A 3 GLN A 58 ? ASN A 64 ? GLN A 58 ASN A 64 A 4 VAL A 107 ? ALA A 112 ? VAL A 107 ALA A 112 A 5 ARG A 35 ? THR A 40 ? ARG A 35 THR A 40 A 6 GLY B 18 ? GLU B 24 ? GLY B 18 GLU B 24 A 7 ILE B 13 ? ASP B 15 ? ILE B 13 ASP B 15 B 1 ILE A 13 ? ASP A 15 ? ILE A 13 ASP A 15 B 2 GLY A 18 ? GLU A 24 ? GLY A 18 GLU A 24 B 3 ARG B 35 ? THR B 40 ? ARG B 35 THR B 40 B 4 VAL B 107 ? ALA B 112 ? VAL B 107 ALA B 112 B 5 GLN B 58 ? ASN B 64 ? GLN B 58 ASN B 64 B 6 VAL B 87 ? ILE B 91 ? VAL B 87 ILE B 91 B 7 VAL B 5 ? LYS B 9 ? VAL B 5 LYS B 9 C 1 GLU A 76 ? LEU A 82 ? GLU A 76 LEU A 82 C 2 VAL A 67 ? ILE A 73 ? VAL A 67 ILE A 73 C 3 TRP A 96 ? PHE A 100 ? TRP A 96 PHE A 100 C 4 ARG A 48 ? HIS A 53 ? ARG A 48 HIS A 53 C 5 TYR A 121 ? ILE A 122 ? TYR A 121 ILE A 122 D 1 GLU B 76 ? LEU B 82 ? GLU B 76 LEU B 82 D 2 VAL B 67 ? ILE B 73 ? VAL B 67 ILE B 73 D 3 TRP B 96 ? PHE B 100 ? TRP B 96 PHE B 100 D 4 THR B 47 ? HIS B 53 ? THR B 47 HIS B 53 D 5 TYR B 121 ? ILE B 122 ? TYR B 121 ILE B 122 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 8 ? N ILE A 8 O GLY A 88 ? O GLY A 88 A 2 3 O LEU A 89 ? O LEU A 89 N LEU A 60 ? N LEU A 60 A 3 4 N ILE A 61 ? N ILE A 61 O LEU A 109 ? O LEU A 109 A 4 5 O ALA A 112 ? O ALA A 112 N ARG A 35 ? N ARG A 35 A 5 6 N VAL A 36 ? N VAL A 36 O ILE B 23 ? O ILE B 23 A 6 7 O LEU B 20 ? O LEU B 20 N ILE B 13 ? N ILE B 13 B 1 2 N ILE A 13 ? N ILE A 13 O LEU A 20 ? O LEU A 20 B 2 3 N ILE A 23 ? N ILE A 23 O VAL B 36 ? O VAL B 36 B 3 4 N TYR B 37 ? N TYR B 37 O VAL B 110 ? O VAL B 110 B 4 5 O LEU B 109 ? O LEU B 109 N ILE B 61 ? N ILE B 61 B 5 6 N LEU B 60 ? N LEU B 60 O LEU B 89 ? O LEU B 89 B 6 7 O GLY B 88 ? O GLY B 88 N ILE B 8 ? N ILE B 8 C 1 2 O LYS A 78 ? O LYS A 78 N LEU A 71 ? N LEU A 71 C 2 3 N LYS A 68 ? N LYS A 68 O PHE A 100 ? O PHE A 100 C 3 4 O MET A 99 ? O MET A 99 N ARG A 48 ? N ARG A 48 C 4 5 N SER A 52 ? N SER A 52 O ILE A 122 ? O ILE A 122 D 1 2 O LYS B 78 ? O LYS B 78 N LEU B 71 ? N LEU B 71 D 2 3 N ARG B 70 ? N ARG B 70 O GLU B 98 ? O GLU B 98 D 3 4 O MET B 99 ? O MET B 99 N ARG B 48 ? N ARG B 48 D 4 5 N SER B 52 ? N SER B 52 O ILE B 122 ? O ILE B 122 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A T46 201 ? 19 'BINDING SITE FOR RESIDUE T46 A 201' AC2 Software B T46 201 ? 22 'BINDING SITE FOR RESIDUE T46 B 201' AC3 Software B EDO 202 ? 5 'BINDING SITE FOR RESIDUE EDO B 202' AC4 Software B 4TD 203 ? 10 'BINDING SITE FOR RESIDUE 4TD B 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ARG A 35 ? ARG A 35 . ? 1_555 ? 2 AC1 19 TYR A 37 ? TYR A 37 . ? 1_555 ? 3 AC1 19 ILE A 39 ? ILE A 39 . ? 1_555 ? 4 AC1 19 ARG A 48 ? ARG A 48 . ? 1_555 ? 5 AC1 19 GLY A 49 ? GLY A 49 . ? 1_555 ? 6 AC1 19 HIS A 53 ? HIS A 53 . ? 1_555 ? 7 AC1 19 GLN A 58 ? GLN A 58 . ? 1_555 ? 8 AC1 19 ARG A 97 ? ARG A 97 . ? 1_555 ? 9 AC1 19 MET A 99 ? MET A 99 . ? 1_555 ? 10 AC1 19 TYR A 116 ? TYR A 116 . ? 1_555 ? 11 AC1 19 TYR A 121 ? TYR A 121 . ? 1_555 ? 12 AC1 19 ARG A 123 ? ARG A 123 . ? 1_555 ? 13 AC1 19 HOH G . ? HOH A 328 . ? 1_555 ? 14 AC1 19 HOH G . ? HOH A 329 . ? 1_555 ? 15 AC1 19 HOH G . ? HOH A 378 . ? 1_555 ? 16 AC1 19 ILE B 13 ? ILE B 13 . ? 1_555 ? 17 AC1 19 PRO B 22 ? PRO B 22 . ? 1_555 ? 18 AC1 19 EDO E . ? EDO B 202 . ? 1_555 ? 19 AC1 19 HOH H . ? HOH B 308 . ? 1_555 ? 20 AC2 22 ILE A 13 ? ILE A 13 . ? 1_555 ? 21 AC2 22 PRO A 22 ? PRO A 22 . ? 1_555 ? 22 AC2 22 HOH G . ? HOH A 394 . ? 1_555 ? 23 AC2 22 ARG B 35 ? ARG B 35 . ? 1_555 ? 24 AC2 22 TYR B 37 ? TYR B 37 . ? 1_555 ? 25 AC2 22 ILE B 39 ? ILE B 39 . ? 1_555 ? 26 AC2 22 ARG B 48 ? ARG B 48 . ? 1_555 ? 27 AC2 22 GLY B 49 ? GLY B 49 . ? 1_555 ? 28 AC2 22 HIS B 53 ? HIS B 53 . ? 1_555 ? 29 AC2 22 GLN B 58 ? GLN B 58 . ? 1_555 ? 30 AC2 22 ARG B 97 ? ARG B 97 . ? 1_555 ? 31 AC2 22 MET B 99 ? MET B 99 . ? 1_555 ? 32 AC2 22 TYR B 116 ? TYR B 116 . ? 1_555 ? 33 AC2 22 TYR B 121 ? TYR B 121 . ? 1_555 ? 34 AC2 22 ARG B 123 ? ARG B 123 . ? 1_555 ? 35 AC2 22 HOH H . ? HOH B 301 . ? 1_555 ? 36 AC2 22 HOH H . ? HOH B 316 . ? 1_555 ? 37 AC2 22 HOH H . ? HOH B 319 . ? 1_555 ? 38 AC2 22 HOH H . ? HOH B 324 . ? 1_555 ? 39 AC2 22 HOH H . ? HOH B 325 . ? 1_555 ? 40 AC2 22 HOH H . ? HOH B 326 . ? 1_555 ? 41 AC2 22 HOH H . ? HOH B 372 . ? 1_555 ? 42 AC3 5 ARG A 48 ? ARG A 48 . ? 1_555 ? 43 AC3 5 GLY A 49 ? GLY A 49 . ? 1_555 ? 44 AC3 5 T46 C . ? T46 A 201 . ? 1_555 ? 45 AC3 5 TYR B 17 ? TYR B 17 . ? 1_555 ? 46 AC3 5 HOH H . ? HOH B 308 . ? 1_555 ? 47 AC4 10 TYR B 50 ? TYR B 50 . ? 8_556 ? 48 AC4 10 TYR B 50 ? TYR B 50 . ? 1_555 ? 49 AC4 10 LYS B 72 ? LYS B 72 . ? 8_556 ? 50 AC4 10 LYS B 72 ? LYS B 72 . ? 1_555 ? 51 AC4 10 TRP B 96 ? TRP B 96 . ? 8_556 ? 52 AC4 10 GLU B 98 ? GLU B 98 . ? 8_556 ? 53 AC4 10 GLU B 98 ? GLU B 98 . ? 1_555 ? 54 AC4 10 TYR B 125 ? TYR B 125 . ? 8_556 ? 55 AC4 10 TYR B 125 ? TYR B 125 . ? 1_555 ? 56 AC4 10 ASP B 126 ? ASP B 126 . ? 8_556 ? # _database_PDB_matrix.entry_id 4O9G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4O9G _atom_sites.fract_transf_matrix[1][1] 0.010483 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010483 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010566 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 PHE 136 136 136 PHE PHE A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 HIS 139 139 ? ? ? A . n A 1 140 HIS 140 140 ? ? ? A . n A 1 141 HIS 141 141 ? ? ? A . n A 1 142 HIS 142 142 ? ? ? A . n A 1 143 HIS 143 143 ? ? ? A . n A 1 144 HIS 144 144 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 LEU 2 2 2 LEU LEU B . n B 1 3 TYR 3 3 3 TYR TYR B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 ILE 8 8 8 ILE ILE B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 TYR 17 17 17 TYR TYR B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 HIS 19 19 19 HIS HIS B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 THR 21 21 21 THR THR B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 ILE 27 27 27 ILE ILE B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 ILE 29 29 29 ILE ILE B . n B 1 30 PRO 30 30 30 PRO PRO B . n B 1 31 PHE 31 31 31 PHE PHE B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 TYR 37 37 37 TYR TYR B . n B 1 38 TYR 38 38 38 TYR TYR B . n B 1 39 ILE 39 39 39 ILE ILE B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 ILE 46 46 46 ILE ILE B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ARG 48 48 48 ARG ARG B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 TYR 50 50 50 TYR TYR B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 HIS 53 53 53 HIS HIS B . n B 1 54 LYS 54 54 54 LYS LYS B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 HIS 57 57 57 HIS HIS B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 CYS 62 62 62 CYS CYS B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 ASN 64 64 64 ASN ASN B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 LYS 68 68 68 LYS LYS B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 PRO 74 74 74 PRO PRO B . n B 1 75 ASP 75 75 75 ASP ASP B . n B 1 76 GLU 76 76 76 GLU GLU B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 LYS 78 78 78 LYS LYS B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 ILE 80 80 80 ILE ILE B . n B 1 81 GLU 81 81 81 GLU GLU B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ASP 84 84 84 ASP ASP B . n B 1 85 PRO 85 85 85 PRO PRO B . n B 1 86 SER 86 86 86 SER SER B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 TYR 90 90 90 TYR TYR B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 GLY 92 92 92 GLY GLY B . n B 1 93 PRO 93 93 93 PRO PRO B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 TRP 96 96 96 TRP TRP B . n B 1 97 ARG 97 97 97 ARG ARG B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 MET 99 99 99 MET MET B . n B 1 100 PHE 100 100 100 PHE PHE B . n B 1 101 ASP 101 101 101 ASP ASP B . n B 1 102 PHE 102 102 102 PHE PHE B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 CYS 106 106 106 CYS CYS B . n B 1 107 VAL 107 107 107 VAL VAL B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 SER 113 113 113 SER SER B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 TYR 115 115 115 TYR TYR B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 ASP 117 117 117 ASP ASP B . n B 1 118 GLU 118 118 118 GLU GLU B . n B 1 119 THR 119 119 119 THR THR B . n B 1 120 ASP 120 120 120 ASP ASP B . n B 1 121 TYR 121 121 121 TYR TYR B . n B 1 122 ILE 122 122 122 ILE ILE B . n B 1 123 ARG 123 123 123 ARG ARG B . n B 1 124 ASN 124 124 124 ASN ASN B . n B 1 125 TYR 125 125 125 TYR TYR B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 PHE 127 127 127 PHE PHE B . n B 1 128 TYR 128 128 128 TYR TYR B . n B 1 129 ILE 129 129 129 ILE ILE B . n B 1 130 ASP 130 130 130 ASP ASP B . n B 1 131 GLU 131 131 131 GLU GLU B . n B 1 132 ALA 132 132 132 ALA ALA B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 LYS 134 134 134 LYS LYS B . n B 1 135 ARG 135 135 135 ARG ARG B . n B 1 136 PHE 136 136 136 PHE PHE B . n B 1 137 LEU 137 137 137 LEU LEU B . n B 1 138 GLU 138 138 138 GLU GLU B . n B 1 139 HIS 139 139 ? ? ? B . n B 1 140 HIS 140 140 ? ? ? B . n B 1 141 HIS 141 141 ? ? ? B . n B 1 142 HIS 142 142 ? ? ? B . n B 1 143 HIS 143 143 ? ? ? B . n B 1 144 HIS 144 144 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T46 1 201 1 T46 LIG A . D 2 T46 1 201 2 T46 LIG B . E 3 EDO 1 202 1 EDO EDO B . F 4 4TD 1 203 1 4TD X21 B . G 5 HOH 1 301 1 HOH HOH A . G 5 HOH 2 302 2 HOH HOH A . G 5 HOH 3 303 3 HOH HOH A . G 5 HOH 4 304 4 HOH HOH A . G 5 HOH 5 305 8 HOH HOH A . G 5 HOH 6 306 10 HOH HOH A . G 5 HOH 7 307 12 HOH HOH A . G 5 HOH 8 308 13 HOH HOH A . G 5 HOH 9 309 14 HOH HOH A . G 5 HOH 10 310 15 HOH HOH A . G 5 HOH 11 311 16 HOH HOH A . G 5 HOH 12 312 17 HOH HOH A . G 5 HOH 13 313 18 HOH HOH A . G 5 HOH 14 314 20 HOH HOH A . G 5 HOH 15 315 21 HOH HOH A . G 5 HOH 16 316 23 HOH HOH A . G 5 HOH 17 317 24 HOH HOH A . G 5 HOH 18 318 26 HOH HOH A . G 5 HOH 19 319 28 HOH HOH A . G 5 HOH 20 320 29 HOH HOH A . G 5 HOH 21 321 32 HOH HOH A . G 5 HOH 22 322 33 HOH HOH A . G 5 HOH 23 323 34 HOH HOH A . G 5 HOH 24 324 35 HOH HOH A . G 5 HOH 25 325 36 HOH HOH A . G 5 HOH 26 326 37 HOH HOH A . G 5 HOH 27 327 38 HOH HOH A . G 5 HOH 28 328 39 HOH HOH A . G 5 HOH 29 329 42 HOH HOH A . G 5 HOH 30 330 43 HOH HOH A . G 5 HOH 31 331 44 HOH HOH A . G 5 HOH 32 332 45 HOH HOH A . G 5 HOH 33 333 46 HOH HOH A . G 5 HOH 34 334 47 HOH HOH A . G 5 HOH 35 335 48 HOH HOH A . G 5 HOH 36 336 49 HOH HOH A . G 5 HOH 37 337 50 HOH HOH A . G 5 HOH 38 338 51 HOH HOH A . G 5 HOH 39 339 52 HOH HOH A . G 5 HOH 40 340 54 HOH HOH A . G 5 HOH 41 341 56 HOH HOH A . G 5 HOH 42 342 57 HOH HOH A . G 5 HOH 43 343 69 HOH HOH A . G 5 HOH 44 344 83 HOH HOH A . G 5 HOH 45 345 84 HOH HOH A . G 5 HOH 46 346 85 HOH HOH A . G 5 HOH 47 347 86 HOH HOH A . G 5 HOH 48 348 88 HOH HOH A . G 5 HOH 49 349 89 HOH HOH A . G 5 HOH 50 350 90 HOH HOH A . G 5 HOH 51 351 91 HOH HOH A . G 5 HOH 52 352 96 HOH HOH A . G 5 HOH 53 353 97 HOH HOH A . G 5 HOH 54 354 98 HOH HOH A . G 5 HOH 55 355 99 HOH HOH A . G 5 HOH 56 356 100 HOH HOH A . G 5 HOH 57 357 101 HOH HOH A . G 5 HOH 58 358 104 HOH HOH A . G 5 HOH 59 359 105 HOH HOH A . G 5 HOH 60 360 106 HOH HOH A . G 5 HOH 61 361 107 HOH HOH A . G 5 HOH 62 362 108 HOH HOH A . G 5 HOH 63 363 109 HOH HOH A . G 5 HOH 64 364 110 HOH HOH A . G 5 HOH 65 365 111 HOH HOH A . G 5 HOH 66 366 112 HOH HOH A . G 5 HOH 67 367 117 HOH HOH A . G 5 HOH 68 368 119 HOH HOH A . G 5 HOH 69 369 120 HOH HOH A . G 5 HOH 70 370 121 HOH HOH A . G 5 HOH 71 371 122 HOH HOH A . G 5 HOH 72 372 123 HOH HOH A . G 5 HOH 73 373 124 HOH HOH A . G 5 HOH 74 374 125 HOH HOH A . G 5 HOH 75 375 127 HOH HOH A . G 5 HOH 76 376 128 HOH HOH A . G 5 HOH 77 377 129 HOH HOH A . G 5 HOH 78 378 139 HOH HOH A . G 5 HOH 79 379 146 HOH HOH A . G 5 HOH 80 380 161 HOH HOH A . G 5 HOH 81 381 162 HOH HOH A . G 5 HOH 82 382 164 HOH HOH A . G 5 HOH 83 383 165 HOH HOH A . G 5 HOH 84 384 166 HOH HOH A . G 5 HOH 85 385 168 HOH HOH A . G 5 HOH 86 386 169 HOH HOH A . G 5 HOH 87 387 173 HOH HOH A . G 5 HOH 88 388 174 HOH HOH A . G 5 HOH 89 389 175 HOH HOH A . G 5 HOH 90 390 176 HOH HOH A . G 5 HOH 91 391 177 HOH HOH A . G 5 HOH 92 392 179 HOH HOH A . G 5 HOH 93 393 182 HOH HOH A . G 5 HOH 94 394 5 HOH HOH A . G 5 HOH 95 395 134 HOH HOH A . G 5 HOH 96 396 135 HOH HOH A . H 5 HOH 1 301 6 HOH HOH B . H 5 HOH 2 302 9 HOH HOH B . H 5 HOH 3 303 11 HOH HOH B . H 5 HOH 4 304 19 HOH HOH B . H 5 HOH 5 305 22 HOH HOH B . H 5 HOH 6 306 25 HOH HOH B . H 5 HOH 7 307 27 HOH HOH B . H 5 HOH 8 308 31 HOH HOH B . H 5 HOH 9 309 40 HOH HOH B . H 5 HOH 10 310 41 HOH HOH B . H 5 HOH 11 311 53 HOH HOH B . H 5 HOH 12 312 58 HOH HOH B . H 5 HOH 13 313 59 HOH HOH B . H 5 HOH 14 314 60 HOH HOH B . H 5 HOH 15 315 61 HOH HOH B . H 5 HOH 16 316 62 HOH HOH B . H 5 HOH 17 317 63 HOH HOH B . H 5 HOH 18 318 64 HOH HOH B . H 5 HOH 19 319 65 HOH HOH B . H 5 HOH 20 320 66 HOH HOH B . H 5 HOH 21 321 67 HOH HOH B . H 5 HOH 22 322 68 HOH HOH B . H 5 HOH 23 323 70 HOH HOH B . H 5 HOH 24 324 71 HOH HOH B . H 5 HOH 25 325 72 HOH HOH B . H 5 HOH 26 326 73 HOH HOH B . H 5 HOH 27 327 74 HOH HOH B . H 5 HOH 28 328 75 HOH HOH B . H 5 HOH 29 329 76 HOH HOH B . H 5 HOH 30 330 77 HOH HOH B . H 5 HOH 31 331 78 HOH HOH B . H 5 HOH 32 332 80 HOH HOH B . H 5 HOH 33 333 81 HOH HOH B . H 5 HOH 34 334 82 HOH HOH B . H 5 HOH 35 335 87 HOH HOH B . H 5 HOH 36 336 92 HOH HOH B . H 5 HOH 37 337 93 HOH HOH B . H 5 HOH 38 338 94 HOH HOH B . H 5 HOH 39 339 95 HOH HOH B . H 5 HOH 40 340 102 HOH HOH B . H 5 HOH 41 341 103 HOH HOH B . H 5 HOH 42 342 113 HOH HOH B . H 5 HOH 43 343 114 HOH HOH B . H 5 HOH 44 344 115 HOH HOH B . H 5 HOH 45 345 116 HOH HOH B . H 5 HOH 46 346 118 HOH HOH B . H 5 HOH 47 347 130 HOH HOH B . H 5 HOH 48 348 131 HOH HOH B . H 5 HOH 49 349 132 HOH HOH B . H 5 HOH 50 350 133 HOH HOH B . H 5 HOH 51 351 136 HOH HOH B . H 5 HOH 52 352 137 HOH HOH B . H 5 HOH 53 353 140 HOH HOH B . H 5 HOH 54 354 141 HOH HOH B . H 5 HOH 55 355 143 HOH HOH B . H 5 HOH 56 356 144 HOH HOH B . H 5 HOH 57 357 145 HOH HOH B . H 5 HOH 58 358 147 HOH HOH B . H 5 HOH 59 359 148 HOH HOH B . H 5 HOH 60 360 149 HOH HOH B . H 5 HOH 61 361 150 HOH HOH B . H 5 HOH 62 362 151 HOH HOH B . H 5 HOH 63 363 152 HOH HOH B . H 5 HOH 64 364 153 HOH HOH B . H 5 HOH 65 365 154 HOH HOH B . H 5 HOH 66 366 155 HOH HOH B . H 5 HOH 67 367 156 HOH HOH B . H 5 HOH 68 368 157 HOH HOH B . H 5 HOH 69 369 158 HOH HOH B . H 5 HOH 70 370 159 HOH HOH B . H 5 HOH 71 371 160 HOH HOH B . H 5 HOH 72 372 167 HOH HOH B . H 5 HOH 73 373 170 HOH HOH B . H 5 HOH 74 374 171 HOH HOH B . H 5 HOH 75 375 172 HOH HOH B . H 5 HOH 76 376 180 HOH HOH B . H 5 HOH 77 377 181 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-09 2 'Structure model' 1 1 2014-06-11 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 SAINT 'data reduction' . ? 4 SADABS 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4O9G _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;AUTHOR STATE THE FOLLOWING: ALA 52-> SER, PHE 94 -> LEU, LEU 95 ->VAL, AND CYS 116 -> TYR WE BELIEVE ARE SEQUENCING ERRORS IN THE DATA BASE DEPOSITION AS PCR USING VARIOUS ENZYMES AND TECHNIQUES ALWAYS GAVE GENES WITH THIS SEQUENCE AND NOT THAT DEPOSITED, AND AS SUCH WE HAVE DISCUSSED THAT IN THE PAPER ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 319 ? ? O B HOH 324 ? ? 1.99 2 1 O A HOH 311 ? ? O A HOH 361 ? ? 2.09 3 1 O A HOH 383 ? ? O A HOH 391 ? ? 2.11 4 1 O B HOH 359 ? ? O B HOH 374 ? ? 2.12 5 1 O A HOH 380 ? ? O A HOH 393 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 15 ? ? -157.00 -158.12 2 1 LYS A 26 ? ? 77.56 -8.44 3 1 ILE A 27 ? ? -105.95 -65.36 4 1 ASN A 83 ? ? -149.14 17.85 5 1 ASP B 15 ? ? -167.45 -161.54 6 1 LYS B 26 ? ? 71.41 -11.93 7 1 ILE B 27 ? ? -103.51 -64.24 8 1 ASN B 83 ? ? -153.74 17.72 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 MET A 1 ? ? LEU A 2 ? ? -149.98 2 1 GLU B 104 ? ? GLY B 105 ? ? -50.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 139 ? A HIS 139 2 1 Y 1 A HIS 140 ? A HIS 140 3 1 Y 1 A HIS 141 ? A HIS 141 4 1 Y 1 A HIS 142 ? A HIS 142 5 1 Y 1 A HIS 143 ? A HIS 143 6 1 Y 1 A HIS 144 ? A HIS 144 7 1 Y 1 B HIS 139 ? B HIS 139 8 1 Y 1 B HIS 140 ? B HIS 140 9 1 Y 1 B HIS 141 ? B HIS 141 10 1 Y 1 B HIS 142 ? B HIS 142 11 1 Y 1 B HIS 143 ? B HIS 143 12 1 Y 1 B HIS 144 ? B HIS 144 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4TD C1 C N N 1 4TD C2 C N N 2 4TD C4 C N N 3 4TD C5 C N S 4 4TD C6 C N N 5 4TD C8 C N N 6 4TD C10 C N N 7 4TD C11 C N S 8 4TD C12 C N N 9 4TD C14 C N N 10 4TD C16 C N N 11 4TD C17 C N S 12 4TD C18 C N N 13 4TD C20 C N N 14 4TD C22 C N N 15 4TD C23 C N R 16 4TD C24 C N N 17 4TD O25 O N N 18 4TD O21 O N N 19 4TD O15 O N N 20 4TD O19 O N N 21 4TD O9 O N N 22 4TD O13 O N N 23 4TD O3 O N N 24 4TD O7 O N N 25 4TD H1 H N N 26 4TD H2 H N N 27 4TD H3 H N N 28 4TD H4 H N N 29 4TD H5 H N N 30 4TD H6 H N N 31 4TD H7 H N N 32 4TD H8 H N N 33 4TD H9 H N N 34 4TD H10 H N N 35 4TD H11 H N N 36 4TD H12 H N N 37 4TD H13 H N N 38 4TD H14 H N N 39 4TD H15 H N N 40 4TD H16 H N N 41 4TD H17 H N N 42 4TD H18 H N N 43 4TD H19 H N N 44 4TD H20 H N N 45 4TD H21 H N N 46 4TD H22 H N N 47 4TD H23 H N N 48 4TD H24 H N N 49 4TD H25 H N N 50 4TD H26 H N N 51 4TD H27 H N N 52 4TD H28 H N N 53 4TD H29 H N N 54 4TD H30 H N N 55 4TD H31 H N N 56 4TD H32 H N N 57 4TD H33 H N N 58 4TD H34 H N N 59 4TD H35 H N N 60 4TD H36 H N N 61 ALA N N N N 62 ALA CA C N S 63 ALA C C N N 64 ALA O O N N 65 ALA CB C N N 66 ALA OXT O N N 67 ALA H H N N 68 ALA H2 H N N 69 ALA HA H N N 70 ALA HB1 H N N 71 ALA HB2 H N N 72 ALA HB3 H N N 73 ALA HXT H N N 74 ARG N N N N 75 ARG CA C N S 76 ARG C C N N 77 ARG O O N N 78 ARG CB C N N 79 ARG CG C N N 80 ARG CD C N N 81 ARG NE N N N 82 ARG CZ C N N 83 ARG NH1 N N N 84 ARG NH2 N N N 85 ARG OXT O N N 86 ARG H H N N 87 ARG H2 H N N 88 ARG HA H N N 89 ARG HB2 H N N 90 ARG HB3 H N N 91 ARG HG2 H N N 92 ARG HG3 H N N 93 ARG HD2 H N N 94 ARG HD3 H N N 95 ARG HE H N N 96 ARG HH11 H N N 97 ARG HH12 H N N 98 ARG HH21 H N N 99 ARG HH22 H N N 100 ARG HXT H N N 101 ASN N N N N 102 ASN CA C N S 103 ASN C C N N 104 ASN O O N N 105 ASN CB C N N 106 ASN CG C N N 107 ASN OD1 O N N 108 ASN ND2 N N N 109 ASN OXT O N N 110 ASN H H N N 111 ASN H2 H N N 112 ASN HA H N N 113 ASN HB2 H N N 114 ASN HB3 H N N 115 ASN HD21 H N N 116 ASN HD22 H N N 117 ASN HXT H N N 118 ASP N N N N 119 ASP CA C N S 120 ASP C C N N 121 ASP O O N N 122 ASP CB C N N 123 ASP CG C N N 124 ASP OD1 O N N 125 ASP OD2 O N N 126 ASP OXT O N N 127 ASP H H N N 128 ASP H2 H N N 129 ASP HA H N N 130 ASP HB2 H N N 131 ASP HB3 H N N 132 ASP HD2 H N N 133 ASP HXT H N N 134 CYS N N N N 135 CYS CA C N R 136 CYS C C N N 137 CYS O O N N 138 CYS CB C N N 139 CYS SG S N N 140 CYS OXT O N N 141 CYS H H N N 142 CYS H2 H N N 143 CYS HA H N N 144 CYS HB2 H N N 145 CYS HB3 H N N 146 CYS HG H N N 147 CYS HXT H N N 148 EDO C1 C N N 149 EDO O1 O N N 150 EDO C2 C N N 151 EDO O2 O N N 152 EDO H11 H N N 153 EDO H12 H N N 154 EDO HO1 H N N 155 EDO H21 H N N 156 EDO H22 H N N 157 EDO HO2 H N N 158 GLN N N N N 159 GLN CA C N S 160 GLN C C N N 161 GLN O O N N 162 GLN CB C N N 163 GLN CG C N N 164 GLN CD C N N 165 GLN OE1 O N N 166 GLN NE2 N N N 167 GLN OXT O N N 168 GLN H H N N 169 GLN H2 H N N 170 GLN HA H N N 171 GLN HB2 H N N 172 GLN HB3 H N N 173 GLN HG2 H N N 174 GLN HG3 H N N 175 GLN HE21 H N N 176 GLN HE22 H N N 177 GLN HXT H N N 178 GLU N N N N 179 GLU CA C N S 180 GLU C C N N 181 GLU O O N N 182 GLU CB C N N 183 GLU CG C N N 184 GLU CD C N N 185 GLU OE1 O N N 186 GLU OE2 O N N 187 GLU OXT O N N 188 GLU H H N N 189 GLU H2 H N N 190 GLU HA H N N 191 GLU HB2 H N N 192 GLU HB3 H N N 193 GLU HG2 H N N 194 GLU HG3 H N N 195 GLU HE2 H N N 196 GLU HXT H N N 197 GLY N N N N 198 GLY CA C N N 199 GLY C C N N 200 GLY O O N N 201 GLY OXT O N N 202 GLY H H N N 203 GLY H2 H N N 204 GLY HA2 H N N 205 GLY HA3 H N N 206 GLY HXT H N N 207 HIS N N N N 208 HIS CA C N S 209 HIS C C N N 210 HIS O O N N 211 HIS CB C N N 212 HIS CG C Y N 213 HIS ND1 N Y N 214 HIS CD2 C Y N 215 HIS CE1 C Y N 216 HIS NE2 N Y N 217 HIS OXT O N N 218 HIS H H N N 219 HIS H2 H N N 220 HIS HA H N N 221 HIS HB2 H N N 222 HIS HB3 H N N 223 HIS HD1 H N N 224 HIS HD2 H N N 225 HIS HE1 H N N 226 HIS HE2 H N N 227 HIS HXT H N N 228 HOH O O N N 229 HOH H1 H N N 230 HOH H2 H N N 231 ILE N N N N 232 ILE CA C N S 233 ILE C C N N 234 ILE O O N N 235 ILE CB C N S 236 ILE CG1 C N N 237 ILE CG2 C N N 238 ILE CD1 C N N 239 ILE OXT O N N 240 ILE H H N N 241 ILE H2 H N N 242 ILE HA H N N 243 ILE HB H N N 244 ILE HG12 H N N 245 ILE HG13 H N N 246 ILE HG21 H N N 247 ILE HG22 H N N 248 ILE HG23 H N N 249 ILE HD11 H N N 250 ILE HD12 H N N 251 ILE HD13 H N N 252 ILE HXT H N N 253 LEU N N N N 254 LEU CA C N S 255 LEU C C N N 256 LEU O O N N 257 LEU CB C N N 258 LEU CG C N N 259 LEU CD1 C N N 260 LEU CD2 C N N 261 LEU OXT O N N 262 LEU H H N N 263 LEU H2 H N N 264 LEU HA H N N 265 LEU HB2 H N N 266 LEU HB3 H N N 267 LEU HG H N N 268 LEU HD11 H N N 269 LEU HD12 H N N 270 LEU HD13 H N N 271 LEU HD21 H N N 272 LEU HD22 H N N 273 LEU HD23 H N N 274 LEU HXT H N N 275 LYS N N N N 276 LYS CA C N S 277 LYS C C N N 278 LYS O O N N 279 LYS CB C N N 280 LYS CG C N N 281 LYS CD C N N 282 LYS CE C N N 283 LYS NZ N N N 284 LYS OXT O N N 285 LYS H H N N 286 LYS H2 H N N 287 LYS HA H N N 288 LYS HB2 H N N 289 LYS HB3 H N N 290 LYS HG2 H N N 291 LYS HG3 H N N 292 LYS HD2 H N N 293 LYS HD3 H N N 294 LYS HE2 H N N 295 LYS HE3 H N N 296 LYS HZ1 H N N 297 LYS HZ2 H N N 298 LYS HZ3 H N N 299 LYS HXT H N N 300 MET N N N N 301 MET CA C N S 302 MET C C N N 303 MET O O N N 304 MET CB C N N 305 MET CG C N N 306 MET SD S N N 307 MET CE C N N 308 MET OXT O N N 309 MET H H N N 310 MET H2 H N N 311 MET HA H N N 312 MET HB2 H N N 313 MET HB3 H N N 314 MET HG2 H N N 315 MET HG3 H N N 316 MET HE1 H N N 317 MET HE2 H N N 318 MET HE3 H N N 319 MET HXT H N N 320 PHE N N N N 321 PHE CA C N S 322 PHE C C N N 323 PHE O O N N 324 PHE CB C N N 325 PHE CG C Y N 326 PHE CD1 C Y N 327 PHE CD2 C Y N 328 PHE CE1 C Y N 329 PHE CE2 C Y N 330 PHE CZ C Y N 331 PHE OXT O N N 332 PHE H H N N 333 PHE H2 H N N 334 PHE HA H N N 335 PHE HB2 H N N 336 PHE HB3 H N N 337 PHE HD1 H N N 338 PHE HD2 H N N 339 PHE HE1 H N N 340 PHE HE2 H N N 341 PHE HZ H N N 342 PHE HXT H N N 343 PRO N N N N 344 PRO CA C N S 345 PRO C C N N 346 PRO O O N N 347 PRO CB C N N 348 PRO CG C N N 349 PRO CD C N N 350 PRO OXT O N N 351 PRO H H N N 352 PRO HA H N N 353 PRO HB2 H N N 354 PRO HB3 H N N 355 PRO HG2 H N N 356 PRO HG3 H N N 357 PRO HD2 H N N 358 PRO HD3 H N N 359 PRO HXT H N N 360 SER N N N N 361 SER CA C N S 362 SER C C N N 363 SER O O N N 364 SER CB C N N 365 SER OG O N N 366 SER OXT O N N 367 SER H H N N 368 SER H2 H N N 369 SER HA H N N 370 SER HB2 H N N 371 SER HB3 H N N 372 SER HG H N N 373 SER HXT H N N 374 T46 C4 C N N 375 T46 C5 C N R 376 T46 C6 C N N 377 T46 C21 C N N 378 T46 O21 O N N 379 T46 N31 N N N 380 T46 C41 C N N 381 T46 O41 O N N 382 T46 C51 C N N 383 T46 C5A C N N 384 T46 C61 C N N 385 T46 N11 N N N 386 T46 C1, C N R 387 T46 C2, C N N 388 T46 C3, C N S 389 T46 O3, O N N 390 T46 O4, O N N 391 T46 C4, C N R 392 T46 C5, C N N 393 T46 O5, O N N 394 T46 P P N N 395 T46 O1P O N N 396 T46 O2P O N N 397 T46 OPP O N N 398 T46 P2 P N N 399 T46 O4P O N N 400 T46 O3P O N N 401 T46 O1 O N N 402 T46 C1 C N R 403 T46 C2 C N R 404 T46 O2 O N N 405 T46 C3 C N R 406 T46 O3 O N N 407 T46 O4 O N N 408 T46 O5 O N N 409 T46 H1 H N N 410 T46 H2 H N N 411 T46 H3 H N N 412 T46 H4 H N N 413 T46 H5 H N N 414 T46 H6 H N N 415 T46 H7 H N N 416 T46 H8 H N N 417 T46 H9 H N N 418 T46 H10 H N N 419 T46 H11 H N N 420 T46 H12 H N N 421 T46 H13 H N N 422 T46 H14 H N N 423 T46 H15 H N N 424 T46 H16 H N N 425 T46 H17 H N N 426 T46 H18 H N N 427 T46 H19 H N N 428 T46 H20 H N N 429 T46 H21 H N N 430 T46 H22 H N N 431 T46 H23 H N N 432 T46 H24 H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 VAL N N N N 502 VAL CA C N S 503 VAL C C N N 504 VAL O O N N 505 VAL CB C N N 506 VAL CG1 C N N 507 VAL CG2 C N N 508 VAL OXT O N N 509 VAL H H N N 510 VAL H2 H N N 511 VAL HA H N N 512 VAL HB H N N 513 VAL HG11 H N N 514 VAL HG12 H N N 515 VAL HG13 H N N 516 VAL HG21 H N N 517 VAL HG22 H N N 518 VAL HG23 H N N 519 VAL HXT H N N 520 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4TD O13 C11 sing N N 1 4TD C11 C12 sing N N 2 4TD C11 C10 sing N N 3 4TD C10 O9 sing N N 4 4TD O9 C8 sing N N 5 4TD C8 C1 sing N N 6 4TD C24 C23 sing N N 7 4TD O25 C23 sing N N 8 4TD C14 C1 sing N N 9 4TD C14 O15 sing N N 10 4TD C16 O15 sing N N 11 4TD C16 C17 sing N N 12 4TD C23 C22 sing N N 13 4TD C22 O21 sing N N 14 4TD C1 C20 sing N N 15 4TD C1 C2 sing N N 16 4TD O19 C17 sing N N 17 4TD O21 C20 sing N N 18 4TD C17 C18 sing N N 19 4TD C2 O3 sing N N 20 4TD C6 C5 sing N N 21 4TD O3 C4 sing N N 22 4TD C4 C5 sing N N 23 4TD C5 O7 sing N N 24 4TD C2 H1 sing N N 25 4TD C2 H2 sing N N 26 4TD C4 H3 sing N N 27 4TD C4 H4 sing N N 28 4TD C5 H5 sing N N 29 4TD C6 H6 sing N N 30 4TD C6 H7 sing N N 31 4TD C6 H8 sing N N 32 4TD C8 H9 sing N N 33 4TD C8 H10 sing N N 34 4TD C10 H11 sing N N 35 4TD C10 H12 sing N N 36 4TD C11 H13 sing N N 37 4TD C12 H14 sing N N 38 4TD C12 H15 sing N N 39 4TD C12 H16 sing N N 40 4TD C14 H17 sing N N 41 4TD C14 H18 sing N N 42 4TD C16 H19 sing N N 43 4TD C16 H20 sing N N 44 4TD C17 H21 sing N N 45 4TD C18 H22 sing N N 46 4TD C18 H23 sing N N 47 4TD C18 H24 sing N N 48 4TD C20 H25 sing N N 49 4TD C20 H26 sing N N 50 4TD C22 H27 sing N N 51 4TD C22 H28 sing N N 52 4TD C23 H29 sing N N 53 4TD C24 H30 sing N N 54 4TD C24 H31 sing N N 55 4TD C24 H32 sing N N 56 4TD O25 H33 sing N N 57 4TD O19 H34 sing N N 58 4TD O13 H35 sing N N 59 4TD O7 H36 sing N N 60 ALA N CA sing N N 61 ALA N H sing N N 62 ALA N H2 sing N N 63 ALA CA C sing N N 64 ALA CA CB sing N N 65 ALA CA HA sing N N 66 ALA C O doub N N 67 ALA C OXT sing N N 68 ALA CB HB1 sing N N 69 ALA CB HB2 sing N N 70 ALA CB HB3 sing N N 71 ALA OXT HXT sing N N 72 ARG N CA sing N N 73 ARG N H sing N N 74 ARG N H2 sing N N 75 ARG CA C sing N N 76 ARG CA CB sing N N 77 ARG CA HA sing N N 78 ARG C O doub N N 79 ARG C OXT sing N N 80 ARG CB CG sing N N 81 ARG CB HB2 sing N N 82 ARG CB HB3 sing N N 83 ARG CG CD sing N N 84 ARG CG HG2 sing N N 85 ARG CG HG3 sing N N 86 ARG CD NE sing N N 87 ARG CD HD2 sing N N 88 ARG CD HD3 sing N N 89 ARG NE CZ sing N N 90 ARG NE HE sing N N 91 ARG CZ NH1 sing N N 92 ARG CZ NH2 doub N N 93 ARG NH1 HH11 sing N N 94 ARG NH1 HH12 sing N N 95 ARG NH2 HH21 sing N N 96 ARG NH2 HH22 sing N N 97 ARG OXT HXT sing N N 98 ASN N CA sing N N 99 ASN N H sing N N 100 ASN N H2 sing N N 101 ASN CA C sing N N 102 ASN CA CB sing N N 103 ASN CA HA sing N N 104 ASN C O doub N N 105 ASN C OXT sing N N 106 ASN CB CG sing N N 107 ASN CB HB2 sing N N 108 ASN CB HB3 sing N N 109 ASN CG OD1 doub N N 110 ASN CG ND2 sing N N 111 ASN ND2 HD21 sing N N 112 ASN ND2 HD22 sing N N 113 ASN OXT HXT sing N N 114 ASP N CA sing N N 115 ASP N H sing N N 116 ASP N H2 sing N N 117 ASP CA C sing N N 118 ASP CA CB sing N N 119 ASP CA HA sing N N 120 ASP C O doub N N 121 ASP C OXT sing N N 122 ASP CB CG sing N N 123 ASP CB HB2 sing N N 124 ASP CB HB3 sing N N 125 ASP CG OD1 doub N N 126 ASP CG OD2 sing N N 127 ASP OD2 HD2 sing N N 128 ASP OXT HXT sing N N 129 CYS N CA sing N N 130 CYS N H sing N N 131 CYS N H2 sing N N 132 CYS CA C sing N N 133 CYS CA CB sing N N 134 CYS CA HA sing N N 135 CYS C O doub N N 136 CYS C OXT sing N N 137 CYS CB SG sing N N 138 CYS CB HB2 sing N N 139 CYS CB HB3 sing N N 140 CYS SG HG sing N N 141 CYS OXT HXT sing N N 142 EDO C1 O1 sing N N 143 EDO C1 C2 sing N N 144 EDO C1 H11 sing N N 145 EDO C1 H12 sing N N 146 EDO O1 HO1 sing N N 147 EDO C2 O2 sing N N 148 EDO C2 H21 sing N N 149 EDO C2 H22 sing N N 150 EDO O2 HO2 sing N N 151 GLN N CA sing N N 152 GLN N H sing N N 153 GLN N H2 sing N N 154 GLN CA C sing N N 155 GLN CA CB sing N N 156 GLN CA HA sing N N 157 GLN C O doub N N 158 GLN C OXT sing N N 159 GLN CB CG sing N N 160 GLN CB HB2 sing N N 161 GLN CB HB3 sing N N 162 GLN CG CD sing N N 163 GLN CG HG2 sing N N 164 GLN CG HG3 sing N N 165 GLN CD OE1 doub N N 166 GLN CD NE2 sing N N 167 GLN NE2 HE21 sing N N 168 GLN NE2 HE22 sing N N 169 GLN OXT HXT sing N N 170 GLU N CA sing N N 171 GLU N H sing N N 172 GLU N H2 sing N N 173 GLU CA C sing N N 174 GLU CA CB sing N N 175 GLU CA HA sing N N 176 GLU C O doub N N 177 GLU C OXT sing N N 178 GLU CB CG sing N N 179 GLU CB HB2 sing N N 180 GLU CB HB3 sing N N 181 GLU CG CD sing N N 182 GLU CG HG2 sing N N 183 GLU CG HG3 sing N N 184 GLU CD OE1 doub N N 185 GLU CD OE2 sing N N 186 GLU OE2 HE2 sing N N 187 GLU OXT HXT sing N N 188 GLY N CA sing N N 189 GLY N H sing N N 190 GLY N H2 sing N N 191 GLY CA C sing N N 192 GLY CA HA2 sing N N 193 GLY CA HA3 sing N N 194 GLY C O doub N N 195 GLY C OXT sing N N 196 GLY OXT HXT sing N N 197 HIS N CA sing N N 198 HIS N H sing N N 199 HIS N H2 sing N N 200 HIS CA C sing N N 201 HIS CA CB sing N N 202 HIS CA HA sing N N 203 HIS C O doub N N 204 HIS C OXT sing N N 205 HIS CB CG sing N N 206 HIS CB HB2 sing N N 207 HIS CB HB3 sing N N 208 HIS CG ND1 sing Y N 209 HIS CG CD2 doub Y N 210 HIS ND1 CE1 doub Y N 211 HIS ND1 HD1 sing N N 212 HIS CD2 NE2 sing Y N 213 HIS CD2 HD2 sing N N 214 HIS CE1 NE2 sing Y N 215 HIS CE1 HE1 sing N N 216 HIS NE2 HE2 sing N N 217 HIS OXT HXT sing N N 218 HOH O H1 sing N N 219 HOH O H2 sing N N 220 ILE N CA sing N N 221 ILE N H sing N N 222 ILE N H2 sing N N 223 ILE CA C sing N N 224 ILE CA CB sing N N 225 ILE CA HA sing N N 226 ILE C O doub N N 227 ILE C OXT sing N N 228 ILE CB CG1 sing N N 229 ILE CB CG2 sing N N 230 ILE CB HB sing N N 231 ILE CG1 CD1 sing N N 232 ILE CG1 HG12 sing N N 233 ILE CG1 HG13 sing N N 234 ILE CG2 HG21 sing N N 235 ILE CG2 HG22 sing N N 236 ILE CG2 HG23 sing N N 237 ILE CD1 HD11 sing N N 238 ILE CD1 HD12 sing N N 239 ILE CD1 HD13 sing N N 240 ILE OXT HXT sing N N 241 LEU N CA sing N N 242 LEU N H sing N N 243 LEU N H2 sing N N 244 LEU CA C sing N N 245 LEU CA CB sing N N 246 LEU CA HA sing N N 247 LEU C O doub N N 248 LEU C OXT sing N N 249 LEU CB CG sing N N 250 LEU CB HB2 sing N N 251 LEU CB HB3 sing N N 252 LEU CG CD1 sing N N 253 LEU CG CD2 sing N N 254 LEU CG HG sing N N 255 LEU CD1 HD11 sing N N 256 LEU CD1 HD12 sing N N 257 LEU CD1 HD13 sing N N 258 LEU CD2 HD21 sing N N 259 LEU CD2 HD22 sing N N 260 LEU CD2 HD23 sing N N 261 LEU OXT HXT sing N N 262 LYS N CA sing N N 263 LYS N H sing N N 264 LYS N H2 sing N N 265 LYS CA C sing N N 266 LYS CA CB sing N N 267 LYS CA HA sing N N 268 LYS C O doub N N 269 LYS C OXT sing N N 270 LYS CB CG sing N N 271 LYS CB HB2 sing N N 272 LYS CB HB3 sing N N 273 LYS CG CD sing N N 274 LYS CG HG2 sing N N 275 LYS CG HG3 sing N N 276 LYS CD CE sing N N 277 LYS CD HD2 sing N N 278 LYS CD HD3 sing N N 279 LYS CE NZ sing N N 280 LYS CE HE2 sing N N 281 LYS CE HE3 sing N N 282 LYS NZ HZ1 sing N N 283 LYS NZ HZ2 sing N N 284 LYS NZ HZ3 sing N N 285 LYS OXT HXT sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 T46 O3, C3, sing N N 359 T46 C3, C2, sing N N 360 T46 C3, C4, sing N N 361 T46 O1P P doub N N 362 T46 C2, C1, sing N N 363 T46 C4, C5, sing N N 364 T46 C4, O4, sing N N 365 T46 C5, O5, sing N N 366 T46 O5, P sing N N 367 T46 P O2P sing N N 368 T46 P OPP sing N N 369 T46 C1, O4, sing N N 370 T46 C1, N11 sing N N 371 T46 O3P P2 doub N N 372 T46 O21 C21 doub N N 373 T46 N11 C21 sing N N 374 T46 N11 C61 sing N N 375 T46 OPP P2 sing N N 376 T46 C21 N31 sing N N 377 T46 P2 O1 sing N N 378 T46 P2 O4P sing N N 379 T46 C61 C51 doub N N 380 T46 O2 C2 sing N N 381 T46 O1 C1 sing N N 382 T46 N31 C41 sing N N 383 T46 C51 C41 sing N N 384 T46 C51 C5A sing N N 385 T46 C41 O41 doub N N 386 T46 C3 C2 sing N N 387 T46 C3 O3 sing N N 388 T46 C3 C4 sing N N 389 T46 C2 C1 sing N N 390 T46 C1 O5 sing N N 391 T46 C4 C5 sing N N 392 T46 C4 O4 doub N N 393 T46 O5 C5 sing N N 394 T46 C5 C6 sing N N 395 T46 C5 H1 sing N N 396 T46 C6 H2 sing N N 397 T46 C6 H3 sing N N 398 T46 C6 H4 sing N N 399 T46 N31 H5 sing N N 400 T46 C5A H6 sing N N 401 T46 C5A H7 sing N N 402 T46 C5A H8 sing N N 403 T46 C61 H9 sing N N 404 T46 C1, H10 sing N N 405 T46 C2, H11 sing N N 406 T46 C2, H12 sing N N 407 T46 C3, H13 sing N N 408 T46 O3, H14 sing N N 409 T46 C4, H15 sing N N 410 T46 C5, H16 sing N N 411 T46 C5, H17 sing N N 412 T46 O2P H18 sing N N 413 T46 O4P H19 sing N N 414 T46 C1 H20 sing N N 415 T46 C2 H21 sing N N 416 T46 O2 H22 sing N N 417 T46 C3 H23 sing N N 418 T46 O3 H24 sing N N 419 THR N CA sing N N 420 THR N H sing N N 421 THR N H2 sing N N 422 THR CA C sing N N 423 THR CA CB sing N N 424 THR CA HA sing N N 425 THR C O doub N N 426 THR C OXT sing N N 427 THR CB OG1 sing N N 428 THR CB CG2 sing N N 429 THR CB HB sing N N 430 THR OG1 HG1 sing N N 431 THR CG2 HG21 sing N N 432 THR CG2 HG22 sing N N 433 THR CG2 HG23 sing N N 434 THR OXT HXT sing N N 435 TRP N CA sing N N 436 TRP N H sing N N 437 TRP N H2 sing N N 438 TRP CA C sing N N 439 TRP CA CB sing N N 440 TRP CA HA sing N N 441 TRP C O doub N N 442 TRP C OXT sing N N 443 TRP CB CG sing N N 444 TRP CB HB2 sing N N 445 TRP CB HB3 sing N N 446 TRP CG CD1 doub Y N 447 TRP CG CD2 sing Y N 448 TRP CD1 NE1 sing Y N 449 TRP CD1 HD1 sing N N 450 TRP CD2 CE2 doub Y N 451 TRP CD2 CE3 sing Y N 452 TRP NE1 CE2 sing Y N 453 TRP NE1 HE1 sing N N 454 TRP CE2 CZ2 sing Y N 455 TRP CE3 CZ3 doub Y N 456 TRP CE3 HE3 sing N N 457 TRP CZ2 CH2 doub Y N 458 TRP CZ2 HZ2 sing N N 459 TRP CZ3 CH2 sing Y N 460 TRP CZ3 HZ3 sing N N 461 TRP CH2 HH2 sing N N 462 TRP OXT HXT sing N N 463 TYR N CA sing N N 464 TYR N H sing N N 465 TYR N H2 sing N N 466 TYR CA C sing N N 467 TYR CA CB sing N N 468 TYR CA HA sing N N 469 TYR C O doub N N 470 TYR C OXT sing N N 471 TYR CB CG sing N N 472 TYR CB HB2 sing N N 473 TYR CB HB3 sing N N 474 TYR CG CD1 doub Y N 475 TYR CG CD2 sing Y N 476 TYR CD1 CE1 sing Y N 477 TYR CD1 HD1 sing N N 478 TYR CD2 CE2 doub Y N 479 TYR CD2 HD2 sing N N 480 TYR CE1 CZ doub Y N 481 TYR CE1 HE1 sing N N 482 TYR CE2 CZ sing Y N 483 TYR CE2 HE2 sing N N 484 TYR CZ OH sing N N 485 TYR OH HH sing N N 486 TYR OXT HXT sing N N 487 VAL N CA sing N N 488 VAL N H sing N N 489 VAL N H2 sing N N 490 VAL CA C sing N N 491 VAL CA CB sing N N 492 VAL CA HA sing N N 493 VAL C O doub N N 494 VAL C OXT sing N N 495 VAL CB CG1 sing N N 496 VAL CB CG2 sing N N 497 VAL CB HB sing N N 498 VAL CG1 HG11 sing N N 499 VAL CG1 HG12 sing N N 500 VAL CG1 HG13 sing N N 501 VAL CG2 HG21 sing N N 502 VAL CG2 HG22 sing N N 503 VAL CG2 HG23 sing N N 504 VAL OXT HXT sing N N 505 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 dTDP-4-keto-6-deoxyglucose T46 3 1,2-ETHANEDIOL EDO 4 '(2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol' 4TD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4O9E _pdbx_initial_refinement_model.details 'PDB entry 4O9E' #