data_4OEF # _entry.id 4OEF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OEF pdb_00004oef 10.2210/pdb4oef/pdb RCSB RCSB084388 ? ? WWPDB D_1000084388 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4OEE . unspecified PDB 4OEG . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OEF _pdbx_database_status.recvd_initial_deposition_date 2014-01-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Y.C.' 1 'Hsiao, C.D.' 2 # _citation.id primary _citation.title 'Interactions that influence the binding of synthetic heparan sulfate based disaccharides to fibroblast growth factor-2.' _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_volume 9 _citation.page_first 1712 _citation.page_last 1717 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1554-8929 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24959968 _citation.pdbx_database_id_DOI 10.1021/cb500298q # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.C.' 1 ? primary 'Ho, I.H.' 2 ? primary 'Ku, C.C.' 3 ? primary 'Zhong, Y.Q.' 4 ? primary 'Hu, Y.P.' 5 ? primary 'Chen, Z.G.' 6 ? primary 'Chen, C.Y.' 7 ? primary 'Lin, W.C.' 8 ? primary 'Zulueta, M.M.' 9 ? primary 'Hung, S.C.' 10 ? primary 'Lin, M.G.' 11 ? primary 'Wang, C.C.' 12 ? primary 'Hsiao, C.D.' 13 ? # _cell.entry_id 4OEF _cell.length_a 30.417 _cell.length_b 33.083 _cell.length_c 35.608 _cell.angle_alpha 65.52 _cell.angle_beta 72.60 _cell.angle_gamma 77.35 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OEF _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fibroblast growth factor 2' 17249.732 1 ? 'C69S, C87S' ? ? 2 branched man '2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid' 609.512 1 ? ? ? ? 3 water nat water 18.015 95 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'FGF-2, Basic fibroblast growth factor, bFGF, Heparin-binding growth factor 2, HBGF-2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAAGSITTLPALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVSAN RYLAMKEDGRLLASKSVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS ; _entity_poly.pdbx_seq_one_letter_code_can ;MAAGSITTLPALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVSAN RYLAMKEDGRLLASKSVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ALA n 1 4 GLY n 1 5 SER n 1 6 ILE n 1 7 THR n 1 8 THR n 1 9 LEU n 1 10 PRO n 1 11 ALA n 1 12 LEU n 1 13 PRO n 1 14 GLU n 1 15 ASP n 1 16 GLY n 1 17 GLY n 1 18 SER n 1 19 GLY n 1 20 ALA n 1 21 PHE n 1 22 PRO n 1 23 PRO n 1 24 GLY n 1 25 HIS n 1 26 PHE n 1 27 LYS n 1 28 ASP n 1 29 PRO n 1 30 LYS n 1 31 ARG n 1 32 LEU n 1 33 TYR n 1 34 CYS n 1 35 LYS n 1 36 ASN n 1 37 GLY n 1 38 GLY n 1 39 PHE n 1 40 PHE n 1 41 LEU n 1 42 ARG n 1 43 ILE n 1 44 HIS n 1 45 PRO n 1 46 ASP n 1 47 GLY n 1 48 ARG n 1 49 VAL n 1 50 ASP n 1 51 GLY n 1 52 VAL n 1 53 ARG n 1 54 GLU n 1 55 LYS n 1 56 SER n 1 57 ASP n 1 58 PRO n 1 59 HIS n 1 60 ILE n 1 61 LYS n 1 62 LEU n 1 63 GLN n 1 64 LEU n 1 65 GLN n 1 66 ALA n 1 67 GLU n 1 68 GLU n 1 69 ARG n 1 70 GLY n 1 71 VAL n 1 72 VAL n 1 73 SER n 1 74 ILE n 1 75 LYS n 1 76 GLY n 1 77 VAL n 1 78 SER n 1 79 ALA n 1 80 ASN n 1 81 ARG n 1 82 TYR n 1 83 LEU n 1 84 ALA n 1 85 MET n 1 86 LYS n 1 87 GLU n 1 88 ASP n 1 89 GLY n 1 90 ARG n 1 91 LEU n 1 92 LEU n 1 93 ALA n 1 94 SER n 1 95 LYS n 1 96 SER n 1 97 VAL n 1 98 THR n 1 99 ASP n 1 100 GLU n 1 101 CYS n 1 102 PHE n 1 103 PHE n 1 104 PHE n 1 105 GLU n 1 106 ARG n 1 107 LEU n 1 108 GLU n 1 109 SER n 1 110 ASN n 1 111 ASN n 1 112 TYR n 1 113 ASN n 1 114 THR n 1 115 TYR n 1 116 ARG n 1 117 SER n 1 118 ARG n 1 119 LYS n 1 120 TYR n 1 121 THR n 1 122 SER n 1 123 TRP n 1 124 TYR n 1 125 VAL n 1 126 ALA n 1 127 LEU n 1 128 LYS n 1 129 ARG n 1 130 THR n 1 131 GLY n 1 132 GLN n 1 133 TYR n 1 134 LYS n 1 135 LEU n 1 136 GLY n 1 137 SER n 1 138 LYS n 1 139 THR n 1 140 GLY n 1 141 PRO n 1 142 GLY n 1 143 GLN n 1 144 LYS n 1 145 ALA n 1 146 ILE n 1 147 LEU n 1 148 PHE n 1 149 LEU n 1 150 PRO n 1 151 MET n 1 152 SER n 1 153 ALA n 1 154 LYS n 1 155 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FGF2, FGFB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(RIPL)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FGF2_HUMAN _struct_ref.pdbx_db_accession P09038 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAAGSITTLPALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCAN RYLAMKEDGRLLASKCVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS ; _struct_ref.pdbx_align_begin 134 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4OEF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 155 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P09038 _struct_ref_seq.db_align_beg 134 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 288 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -8 _struct_ref_seq.pdbx_auth_seq_align_end 146 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OEF SER A 78 ? UNP P09038 CYS 211 'engineered mutation' 69 1 1 4OEF SER A 96 ? UNP P09038 CYS 229 'engineered mutation' 87 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IDY 'L-saccharide, alpha linking' n '1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid' ;methyl 2-O-sulfo-alpha-L-idopyranosiduronic acid; 1-O-methyl-2-O-sulfo-alpha-L-iduronic acid; 1-O-methyl-2-O-sulfo-L-iduronic acid; 1-O-methyl-2-O-sulfo-iduronic acid ; 'C7 H12 O10 S' 288.229 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SGN 'D-saccharide, alpha linking' n '2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose' ;N,O6-DISULFO-GLUCOSAMINE; 6-O-sulfo-N-sulfo-alpha-D-glucosamine; 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-glucose ; 'C6 H13 N O11 S2' 339.298 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OEF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.79 _exptl_crystal.density_percent_sol 31.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 299 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_details '40% polyethylene glycol 600 and 100 mM Na2HPO4/citric acid, pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 299K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS HTC' _diffrn_detector.pdbx_collection_date 2012-05-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 4OEF _reflns.observed_criterion_sigma_I 5 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 25 _reflns.d_resolution_high 1.8 _reflns.number_obs 10466 _reflns.number_all 10466 _reflns.percent_possible_obs 94.2 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rsym_value 0.046 _reflns.pdbx_netI_over_sigmaI 36.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 91.0 _reflns_shell.Rmerge_I_obs 0.274 _reflns_shell.pdbx_Rsym_value 0.274 _reflns_shell.meanI_over_sigI_obs 6.7 _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4OEF _refine.ls_number_reflns_obs 10464 _refine.ls_number_reflns_all 10466 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.97 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.304 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 93.91 _refine.ls_R_factor_obs 0.1744 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1691 _refine.ls_R_factor_R_free 0.2201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.01 _refine.ls_number_reflns_R_free 1047 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1BFC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 25.12 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1009 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 1141 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 24.304 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1068 ? 'X-RAY DIFFRACTION' f_angle_d 1.197 ? ? 1436 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.090 ? ? 418 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.083 ? ? 152 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 179 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7973 1.8920 1269 0.2006 89.00 0.2660 . . 140 . . . . 'X-RAY DIFFRACTION' . 1.8920 2.0105 1301 0.1797 92.00 0.2395 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.0105 2.1656 1354 0.1617 93.00 0.2512 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.1656 2.3834 1334 0.1708 94.00 0.2247 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.3834 2.7279 1365 0.1903 95.00 0.2272 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.7279 3.4353 1378 0.1787 97.00 0.2281 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.4353 24.3061 1416 0.1492 98.00 0.1907 . . 158 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4OEF _struct.title 'Crystal Structure Analysis of FGF2-Disaccharide (S6I2) complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OEF _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Heparin/Heparin Sulfate Binding, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 98 ? CYS A 101 ? THR A 89 CYS A 92 5 ? 4 HELX_P HELX_P2 2 LEU A 135 ? THR A 139 ? LEU A 126 THR A 130 5 ? 5 HELX_P HELX_P3 3 GLN A 143 ? ILE A 146 ? GLN A 134 ILE A 137 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id IDY _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id O4 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id SGN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id IDY _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id SGN _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.436 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 49 ? VAL A 52 ? VAL A 40 VAL A 43 A 2 PHE A 39 ? ILE A 43 ? PHE A 30 ILE A 34 A 3 ARG A 31 ? CYS A 34 ? ARG A 22 CYS A 25 A 4 PHE A 148 ? MET A 151 ? PHE A 139 MET A 142 B 1 LEU A 62 ? GLU A 68 ? LEU A 53 GLU A 59 B 2 VAL A 71 ? GLY A 76 ? VAL A 62 GLY A 67 B 3 ARG A 81 ? MET A 85 ? ARG A 72 MET A 76 B 4 LEU A 91 ? SER A 94 ? LEU A 82 SER A 85 C 1 LEU A 62 ? GLU A 68 ? LEU A 53 GLU A 59 C 2 VAL A 71 ? GLY A 76 ? VAL A 62 GLY A 67 C 3 PHE A 103 ? LEU A 107 ? PHE A 94 LEU A 98 C 4 ASN A 113 ? SER A 117 ? ASN A 104 SER A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 52 ? O VAL A 43 N PHE A 40 ? N PHE A 31 A 2 3 O PHE A 39 ? O PHE A 30 N CYS A 34 ? N CYS A 25 A 3 4 N ARG A 31 ? N ARG A 22 O MET A 151 ? O MET A 142 B 1 2 N GLN A 63 ? N GLN A 54 O LYS A 75 ? O LYS A 66 B 2 3 N ILE A 74 ? N ILE A 65 O LEU A 83 ? O LEU A 74 B 3 4 N TYR A 82 ? N TYR A 73 O SER A 94 ? O SER A 85 C 1 2 N GLN A 63 ? N GLN A 54 O LYS A 75 ? O LYS A 66 C 2 3 N VAL A 72 ? N VAL A 63 O PHE A 103 ? O PHE A 94 C 3 4 N PHE A 104 ? N PHE A 95 O ARG A 116 ? O ARG A 107 # _database_PDB_matrix.entry_id 4OEF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OEF _atom_sites.fract_transf_matrix[1][1] 0.032876 _atom_sites.fract_transf_matrix[1][2] -0.007377 _atom_sites.fract_transf_matrix[1][3] -0.008128 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030979 _atom_sites.fract_transf_matrix[2][3] -0.012524 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031744 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -8 ? ? ? A . n A 1 2 ALA 2 -7 ? ? ? A . n A 1 3 ALA 3 -6 ? ? ? A . n A 1 4 GLY 4 -5 ? ? ? A . n A 1 5 SER 5 -4 ? ? ? A . n A 1 6 ILE 6 -3 ? ? ? A . n A 1 7 THR 7 -2 ? ? ? A . n A 1 8 THR 8 -1 ? ? ? A . n A 1 9 LEU 9 0 ? ? ? A . n A 1 10 PRO 10 1 ? ? ? A . n A 1 11 ALA 11 2 ? ? ? A . n A 1 12 LEU 12 3 ? ? ? A . n A 1 13 PRO 13 4 ? ? ? A . n A 1 14 GLU 14 5 ? ? ? A . n A 1 15 ASP 15 6 ? ? ? A . n A 1 16 GLY 16 7 ? ? ? A . n A 1 17 GLY 17 8 ? ? ? A . n A 1 18 SER 18 9 ? ? ? A . n A 1 19 GLY 19 10 ? ? ? A . n A 1 20 ALA 20 11 ? ? ? A . n A 1 21 PHE 21 12 ? ? ? A . n A 1 22 PRO 22 13 ? ? ? A . n A 1 23 PRO 23 14 ? ? ? A . n A 1 24 GLY 24 15 ? ? ? A . n A 1 25 HIS 25 16 ? ? ? A . n A 1 26 PHE 26 17 ? ? ? A . n A 1 27 LYS 27 18 ? ? ? A . n A 1 28 ASP 28 19 19 ASP ASP A . n A 1 29 PRO 29 20 20 PRO PRO A . n A 1 30 LYS 30 21 21 LYS LYS A . n A 1 31 ARG 31 22 22 ARG ARG A . n A 1 32 LEU 32 23 23 LEU LEU A . n A 1 33 TYR 33 24 24 TYR TYR A . n A 1 34 CYS 34 25 25 CYS CYS A . n A 1 35 LYS 35 26 26 LYS LYS A . n A 1 36 ASN 36 27 27 ASN ASN A . n A 1 37 GLY 37 28 28 GLY GLY A . n A 1 38 GLY 38 29 29 GLY GLY A . n A 1 39 PHE 39 30 30 PHE PHE A . n A 1 40 PHE 40 31 31 PHE PHE A . n A 1 41 LEU 41 32 32 LEU LEU A . n A 1 42 ARG 42 33 33 ARG ARG A . n A 1 43 ILE 43 34 34 ILE ILE A . n A 1 44 HIS 44 35 35 HIS HIS A . n A 1 45 PRO 45 36 36 PRO PRO A . n A 1 46 ASP 46 37 37 ASP ASP A . n A 1 47 GLY 47 38 38 GLY GLY A . n A 1 48 ARG 48 39 39 ARG ARG A . n A 1 49 VAL 49 40 40 VAL VAL A . n A 1 50 ASP 50 41 41 ASP ASP A . n A 1 51 GLY 51 42 42 GLY GLY A . n A 1 52 VAL 52 43 43 VAL VAL A . n A 1 53 ARG 53 44 44 ARG ARG A . n A 1 54 GLU 54 45 45 GLU GLU A . n A 1 55 LYS 55 46 46 LYS LYS A . n A 1 56 SER 56 47 47 SER SER A . n A 1 57 ASP 57 48 48 ASP ASP A . n A 1 58 PRO 58 49 49 PRO PRO A . n A 1 59 HIS 59 50 50 HIS HIS A . n A 1 60 ILE 60 51 51 ILE ILE A . n A 1 61 LYS 61 52 52 LYS LYS A . n A 1 62 LEU 62 53 53 LEU LEU A . n A 1 63 GLN 63 54 54 GLN GLN A . n A 1 64 LEU 64 55 55 LEU LEU A . n A 1 65 GLN 65 56 56 GLN GLN A . n A 1 66 ALA 66 57 57 ALA ALA A . n A 1 67 GLU 67 58 58 GLU GLU A . n A 1 68 GLU 68 59 59 GLU GLU A . n A 1 69 ARG 69 60 60 ARG ARG A . n A 1 70 GLY 70 61 61 GLY GLY A . n A 1 71 VAL 71 62 62 VAL VAL A . n A 1 72 VAL 72 63 63 VAL VAL A . n A 1 73 SER 73 64 64 SER SER A . n A 1 74 ILE 74 65 65 ILE ILE A . n A 1 75 LYS 75 66 66 LYS LYS A . n A 1 76 GLY 76 67 67 GLY GLY A . n A 1 77 VAL 77 68 68 VAL VAL A . n A 1 78 SER 78 69 69 SER SER A . n A 1 79 ALA 79 70 70 ALA ALA A . n A 1 80 ASN 80 71 71 ASN ASN A . n A 1 81 ARG 81 72 72 ARG ARG A . n A 1 82 TYR 82 73 73 TYR TYR A . n A 1 83 LEU 83 74 74 LEU LEU A . n A 1 84 ALA 84 75 75 ALA ALA A . n A 1 85 MET 85 76 76 MET MET A . n A 1 86 LYS 86 77 77 LYS LYS A . n A 1 87 GLU 87 78 78 GLU GLU A . n A 1 88 ASP 88 79 79 ASP ASP A . n A 1 89 GLY 89 80 80 GLY GLY A . n A 1 90 ARG 90 81 81 ARG ARG A . n A 1 91 LEU 91 82 82 LEU LEU A . n A 1 92 LEU 92 83 83 LEU LEU A . n A 1 93 ALA 93 84 84 ALA ALA A . n A 1 94 SER 94 85 85 SER SER A . n A 1 95 LYS 95 86 86 LYS LYS A . n A 1 96 SER 96 87 87 SER SER A . n A 1 97 VAL 97 88 88 VAL VAL A . n A 1 98 THR 98 89 89 THR THR A . n A 1 99 ASP 99 90 90 ASP ASP A . n A 1 100 GLU 100 91 91 GLU GLU A . n A 1 101 CYS 101 92 92 CYS CYS A . n A 1 102 PHE 102 93 93 PHE PHE A . n A 1 103 PHE 103 94 94 PHE PHE A . n A 1 104 PHE 104 95 95 PHE PHE A . n A 1 105 GLU 105 96 96 GLU GLU A . n A 1 106 ARG 106 97 97 ARG ARG A . n A 1 107 LEU 107 98 98 LEU LEU A . n A 1 108 GLU 108 99 99 GLU GLU A . n A 1 109 SER 109 100 100 SER SER A . n A 1 110 ASN 110 101 101 ASN ASN A . n A 1 111 ASN 111 102 102 ASN ASN A . n A 1 112 TYR 112 103 103 TYR TYR A . n A 1 113 ASN 113 104 104 ASN ASN A . n A 1 114 THR 114 105 105 THR THR A . n A 1 115 TYR 115 106 106 TYR TYR A . n A 1 116 ARG 116 107 107 ARG ARG A . n A 1 117 SER 117 108 108 SER SER A . n A 1 118 ARG 118 109 109 ARG ARG A . n A 1 119 LYS 119 110 110 LYS LYS A . n A 1 120 TYR 120 111 111 TYR TYR A . n A 1 121 THR 121 112 112 THR THR A . n A 1 122 SER 122 113 113 SER SER A . n A 1 123 TRP 123 114 114 TRP TRP A . n A 1 124 TYR 124 115 115 TYR TYR A . n A 1 125 VAL 125 116 116 VAL VAL A . n A 1 126 ALA 126 117 117 ALA ALA A . n A 1 127 LEU 127 118 118 LEU LEU A . n A 1 128 LYS 128 119 119 LYS LYS A . n A 1 129 ARG 129 120 120 ARG ARG A . n A 1 130 THR 130 121 121 THR THR A . n A 1 131 GLY 131 122 122 GLY GLY A . n A 1 132 GLN 132 123 123 GLN GLN A . n A 1 133 TYR 133 124 124 TYR TYR A . n A 1 134 LYS 134 125 125 LYS LYS A . n A 1 135 LEU 135 126 126 LEU LEU A . n A 1 136 GLY 136 127 127 GLY GLY A . n A 1 137 SER 137 128 128 SER SER A . n A 1 138 LYS 138 129 129 LYS LYS A . n A 1 139 THR 139 130 130 THR THR A . n A 1 140 GLY 140 131 131 GLY GLY A . n A 1 141 PRO 141 132 132 PRO PRO A . n A 1 142 GLY 142 133 133 GLY GLY A . n A 1 143 GLN 143 134 134 GLN GLN A . n A 1 144 LYS 144 135 135 LYS LYS A . n A 1 145 ALA 145 136 136 ALA ALA A . n A 1 146 ILE 146 137 137 ILE ILE A . n A 1 147 LEU 147 138 138 LEU LEU A . n A 1 148 PHE 148 139 139 PHE PHE A . n A 1 149 LEU 149 140 140 LEU LEU A . n A 1 150 PRO 150 141 141 PRO PRO A . n A 1 151 MET 151 142 142 MET MET A . n A 1 152 SER 152 143 143 SER SER A . n A 1 153 ALA 153 144 ? ? ? A . n A 1 154 LYS 154 145 ? ? ? A . n A 1 155 SER 155 146 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 22 HOH HOH A . C 3 HOH 23 323 23 HOH HOH A . C 3 HOH 24 324 24 HOH HOH A . C 3 HOH 25 325 25 HOH HOH A . C 3 HOH 26 326 26 HOH HOH A . C 3 HOH 27 327 27 HOH HOH A . C 3 HOH 28 328 28 HOH HOH A . C 3 HOH 29 329 29 HOH HOH A . C 3 HOH 30 330 30 HOH HOH A . C 3 HOH 31 331 31 HOH HOH A . C 3 HOH 32 332 32 HOH HOH A . C 3 HOH 33 333 33 HOH HOH A . C 3 HOH 34 334 34 HOH HOH A . C 3 HOH 35 335 35 HOH HOH A . C 3 HOH 36 336 36 HOH HOH A . C 3 HOH 37 337 37 HOH HOH A . C 3 HOH 38 338 38 HOH HOH A . C 3 HOH 39 339 39 HOH HOH A . C 3 HOH 40 340 40 HOH HOH A . C 3 HOH 41 341 41 HOH HOH A . C 3 HOH 42 342 42 HOH HOH A . C 3 HOH 43 343 43 HOH HOH A . C 3 HOH 44 344 44 HOH HOH A . C 3 HOH 45 345 45 HOH HOH A . C 3 HOH 46 346 46 HOH HOH A . C 3 HOH 47 347 47 HOH HOH A . C 3 HOH 48 348 48 HOH HOH A . C 3 HOH 49 349 49 HOH HOH A . C 3 HOH 50 350 50 HOH HOH A . C 3 HOH 51 351 51 HOH HOH A . C 3 HOH 52 352 52 HOH HOH A . C 3 HOH 53 353 53 HOH HOH A . C 3 HOH 54 354 54 HOH HOH A . C 3 HOH 55 355 55 HOH HOH A . C 3 HOH 56 356 56 HOH HOH A . C 3 HOH 57 357 57 HOH HOH A . C 3 HOH 58 358 58 HOH HOH A . C 3 HOH 59 359 59 HOH HOH A . C 3 HOH 60 360 60 HOH HOH A . C 3 HOH 61 361 61 HOH HOH A . C 3 HOH 62 362 62 HOH HOH A . C 3 HOH 63 363 63 HOH HOH A . C 3 HOH 64 364 64 HOH HOH A . C 3 HOH 65 365 65 HOH HOH A . C 3 HOH 66 366 66 HOH HOH A . C 3 HOH 67 367 67 HOH HOH A . C 3 HOH 68 368 68 HOH HOH A . C 3 HOH 69 369 69 HOH HOH A . C 3 HOH 70 370 70 HOH HOH A . C 3 HOH 71 371 71 HOH HOH A . C 3 HOH 72 372 72 HOH HOH A . C 3 HOH 73 373 73 HOH HOH A . C 3 HOH 74 374 74 HOH HOH A . C 3 HOH 75 375 75 HOH HOH A . C 3 HOH 76 376 76 HOH HOH A . C 3 HOH 77 377 77 HOH HOH A . C 3 HOH 78 378 78 HOH HOH A . C 3 HOH 79 379 79 HOH HOH A . C 3 HOH 80 380 80 HOH HOH A . C 3 HOH 81 381 81 HOH HOH A . C 3 HOH 82 382 82 HOH HOH A . C 3 HOH 83 383 83 HOH HOH A . C 3 HOH 84 384 84 HOH HOH A . C 3 HOH 85 385 85 HOH HOH A . C 3 HOH 86 386 86 HOH HOH A . C 3 HOH 87 387 87 HOH HOH A . C 3 HOH 88 388 88 HOH HOH A . C 3 HOH 89 389 89 HOH HOH A . C 3 HOH 90 390 90 HOH HOH A . C 3 HOH 91 391 91 HOH HOH A . C 3 HOH 92 392 92 HOH HOH A . C 3 HOH 93 393 93 HOH HOH A . C 3 HOH 94 394 94 HOH HOH A . C 3 HOH 95 395 95 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-09 2 'Structure model' 1 1 2014-09-10 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Refinement description' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' struct_asym 14 3 'Structure model' struct_conn 15 3 'Structure model' struct_ref_seq_dif 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.mon_nstd_flag' 15 3 'Structure model' '_chem_comp.name' 16 3 'Structure model' '_chem_comp.type' 17 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 3 'Structure model' '_struct_ref_seq_dif.details' 31 4 'Structure model' '_chem_comp.pdbx_synonyms' 32 4 'Structure model' '_database_2.pdbx_DOI' 33 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -8 ? A MET 1 2 1 Y 1 A ALA -7 ? A ALA 2 3 1 Y 1 A ALA -6 ? A ALA 3 4 1 Y 1 A GLY -5 ? A GLY 4 5 1 Y 1 A SER -4 ? A SER 5 6 1 Y 1 A ILE -3 ? A ILE 6 7 1 Y 1 A THR -2 ? A THR 7 8 1 Y 1 A THR -1 ? A THR 8 9 1 Y 1 A LEU 0 ? A LEU 9 10 1 Y 1 A PRO 1 ? A PRO 10 11 1 Y 1 A ALA 2 ? A ALA 11 12 1 Y 1 A LEU 3 ? A LEU 12 13 1 Y 1 A PRO 4 ? A PRO 13 14 1 Y 1 A GLU 5 ? A GLU 14 15 1 Y 1 A ASP 6 ? A ASP 15 16 1 Y 1 A GLY 7 ? A GLY 16 17 1 Y 1 A GLY 8 ? A GLY 17 18 1 Y 1 A SER 9 ? A SER 18 19 1 Y 1 A GLY 10 ? A GLY 19 20 1 Y 1 A ALA 11 ? A ALA 20 21 1 Y 1 A PHE 12 ? A PHE 21 22 1 Y 1 A PRO 13 ? A PRO 22 23 1 Y 1 A PRO 14 ? A PRO 23 24 1 Y 1 A GLY 15 ? A GLY 24 25 1 Y 1 A HIS 16 ? A HIS 25 26 1 Y 1 A PHE 17 ? A PHE 26 27 1 Y 1 A LYS 18 ? A LYS 27 28 1 Y 1 A ALA 144 ? A ALA 153 29 1 Y 1 A LYS 145 ? A LYS 154 30 1 Y 1 A SER 146 ? A SER 155 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 IDY S S N N 161 IDY C1 C N R 162 IDY O1 O N N 163 IDY C2 C N R 164 IDY O2 O N N 165 IDY C3 C N S 166 IDY O3 O N N 167 IDY C4 C N S 168 IDY O4 O N N 169 IDY C5 C N R 170 IDY O5 O N N 171 IDY C6 C N N 172 IDY C7 C N N 173 IDY O6A O N N 174 IDY O6B O N N 175 IDY OS1 O N N 176 IDY OS2 O N N 177 IDY OS3 O N N 178 IDY H1 H N N 179 IDY H2 H N N 180 IDY H3 H N N 181 IDY HO3 H N N 182 IDY H4 H N N 183 IDY HO4 H N N 184 IDY H5 H N N 185 IDY H7 H N N 186 IDY H7A H N N 187 IDY H7B H N N 188 IDY HO6B H N N 189 IDY HOS3 H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 LEU N N N N 213 LEU CA C N S 214 LEU C C N N 215 LEU O O N N 216 LEU CB C N N 217 LEU CG C N N 218 LEU CD1 C N N 219 LEU CD2 C N N 220 LEU OXT O N N 221 LEU H H N N 222 LEU H2 H N N 223 LEU HA H N N 224 LEU HB2 H N N 225 LEU HB3 H N N 226 LEU HG H N N 227 LEU HD11 H N N 228 LEU HD12 H N N 229 LEU HD13 H N N 230 LEU HD21 H N N 231 LEU HD22 H N N 232 LEU HD23 H N N 233 LEU HXT H N N 234 LYS N N N N 235 LYS CA C N S 236 LYS C C N N 237 LYS O O N N 238 LYS CB C N N 239 LYS CG C N N 240 LYS CD C N N 241 LYS CE C N N 242 LYS NZ N N N 243 LYS OXT O N N 244 LYS H H N N 245 LYS H2 H N N 246 LYS HA H N N 247 LYS HB2 H N N 248 LYS HB3 H N N 249 LYS HG2 H N N 250 LYS HG3 H N N 251 LYS HD2 H N N 252 LYS HD3 H N N 253 LYS HE2 H N N 254 LYS HE3 H N N 255 LYS HZ1 H N N 256 LYS HZ2 H N N 257 LYS HZ3 H N N 258 LYS HXT H N N 259 MET N N N N 260 MET CA C N S 261 MET C C N N 262 MET O O N N 263 MET CB C N N 264 MET CG C N N 265 MET SD S N N 266 MET CE C N N 267 MET OXT O N N 268 MET H H N N 269 MET H2 H N N 270 MET HA H N N 271 MET HB2 H N N 272 MET HB3 H N N 273 MET HG2 H N N 274 MET HG3 H N N 275 MET HE1 H N N 276 MET HE2 H N N 277 MET HE3 H N N 278 MET HXT H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 SGN C1 C N S 334 SGN C2 C N R 335 SGN C3 C N R 336 SGN C4 C N S 337 SGN C5 C N R 338 SGN C6 C N N 339 SGN N2 N N N 340 SGN O1 O N N 341 SGN O3 O N N 342 SGN O4 O N N 343 SGN O5 O N N 344 SGN O6 O N N 345 SGN S1 S N N 346 SGN O1S O N N 347 SGN O2S O N N 348 SGN O3S O N N 349 SGN S2 S N N 350 SGN O4S O N N 351 SGN O5S O N N 352 SGN O6S O N N 353 SGN H1 H N N 354 SGN H2 H N N 355 SGN H3 H N N 356 SGN H4 H N N 357 SGN H5 H N N 358 SGN H61 H N N 359 SGN H62 H N N 360 SGN HN21 H N N 361 SGN HO1 H N N 362 SGN HO3 H N N 363 SGN HO4 H N N 364 SGN HOS3 H N N 365 SGN HOS6 H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 IDY S O2 sing N N 152 IDY S OS1 doub N N 153 IDY S OS2 doub N N 154 IDY S OS3 sing N N 155 IDY C1 O1 sing N N 156 IDY C1 C2 sing N N 157 IDY C1 O5 sing N N 158 IDY O1 C7 sing N N 159 IDY C2 O2 sing N N 160 IDY C2 C3 sing N N 161 IDY C3 O3 sing N N 162 IDY C3 C4 sing N N 163 IDY C4 O4 sing N N 164 IDY C4 C5 sing N N 165 IDY C5 O5 sing N N 166 IDY C5 C6 sing N N 167 IDY C6 O6A doub N N 168 IDY C6 O6B sing N N 169 IDY C1 H1 sing N N 170 IDY C2 H2 sing N N 171 IDY C3 H3 sing N N 172 IDY O3 HO3 sing N N 173 IDY C4 H4 sing N N 174 IDY O4 HO4 sing N N 175 IDY C5 H5 sing N N 176 IDY C7 H7 sing N N 177 IDY C7 H7A sing N N 178 IDY C7 H7B sing N N 179 IDY O6B HO6B sing N N 180 IDY OS3 HOS3 sing N N 181 ILE N CA sing N N 182 ILE N H sing N N 183 ILE N H2 sing N N 184 ILE CA C sing N N 185 ILE CA CB sing N N 186 ILE CA HA sing N N 187 ILE C O doub N N 188 ILE C OXT sing N N 189 ILE CB CG1 sing N N 190 ILE CB CG2 sing N N 191 ILE CB HB sing N N 192 ILE CG1 CD1 sing N N 193 ILE CG1 HG12 sing N N 194 ILE CG1 HG13 sing N N 195 ILE CG2 HG21 sing N N 196 ILE CG2 HG22 sing N N 197 ILE CG2 HG23 sing N N 198 ILE CD1 HD11 sing N N 199 ILE CD1 HD12 sing N N 200 ILE CD1 HD13 sing N N 201 ILE OXT HXT sing N N 202 LEU N CA sing N N 203 LEU N H sing N N 204 LEU N H2 sing N N 205 LEU CA C sing N N 206 LEU CA CB sing N N 207 LEU CA HA sing N N 208 LEU C O doub N N 209 LEU C OXT sing N N 210 LEU CB CG sing N N 211 LEU CB HB2 sing N N 212 LEU CB HB3 sing N N 213 LEU CG CD1 sing N N 214 LEU CG CD2 sing N N 215 LEU CG HG sing N N 216 LEU CD1 HD11 sing N N 217 LEU CD1 HD12 sing N N 218 LEU CD1 HD13 sing N N 219 LEU CD2 HD21 sing N N 220 LEU CD2 HD22 sing N N 221 LEU CD2 HD23 sing N N 222 LEU OXT HXT sing N N 223 LYS N CA sing N N 224 LYS N H sing N N 225 LYS N H2 sing N N 226 LYS CA C sing N N 227 LYS CA CB sing N N 228 LYS CA HA sing N N 229 LYS C O doub N N 230 LYS C OXT sing N N 231 LYS CB CG sing N N 232 LYS CB HB2 sing N N 233 LYS CB HB3 sing N N 234 LYS CG CD sing N N 235 LYS CG HG2 sing N N 236 LYS CG HG3 sing N N 237 LYS CD CE sing N N 238 LYS CD HD2 sing N N 239 LYS CD HD3 sing N N 240 LYS CE NZ sing N N 241 LYS CE HE2 sing N N 242 LYS CE HE3 sing N N 243 LYS NZ HZ1 sing N N 244 LYS NZ HZ2 sing N N 245 LYS NZ HZ3 sing N N 246 LYS OXT HXT sing N N 247 MET N CA sing N N 248 MET N H sing N N 249 MET N H2 sing N N 250 MET CA C sing N N 251 MET CA CB sing N N 252 MET CA HA sing N N 253 MET C O doub N N 254 MET C OXT sing N N 255 MET CB CG sing N N 256 MET CB HB2 sing N N 257 MET CB HB3 sing N N 258 MET CG SD sing N N 259 MET CG HG2 sing N N 260 MET CG HG3 sing N N 261 MET SD CE sing N N 262 MET CE HE1 sing N N 263 MET CE HE2 sing N N 264 MET CE HE3 sing N N 265 MET OXT HXT sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 SGN C1 C2 sing N N 320 SGN C1 O1 sing N N 321 SGN C1 O5 sing N N 322 SGN C1 H1 sing N N 323 SGN C2 C3 sing N N 324 SGN C2 N2 sing N N 325 SGN C2 H2 sing N N 326 SGN C3 C4 sing N N 327 SGN C3 O3 sing N N 328 SGN C3 H3 sing N N 329 SGN C4 C5 sing N N 330 SGN C4 O4 sing N N 331 SGN C4 H4 sing N N 332 SGN C5 C6 sing N N 333 SGN C5 O5 sing N N 334 SGN C5 H5 sing N N 335 SGN C6 O6 sing N N 336 SGN C6 H61 sing N N 337 SGN C6 H62 sing N N 338 SGN N2 S1 sing N N 339 SGN N2 HN21 sing N N 340 SGN O1 HO1 sing N N 341 SGN O3 HO3 sing N N 342 SGN O4 HO4 sing N N 343 SGN O6 S2 sing N N 344 SGN S1 O1S doub N N 345 SGN S1 O2S doub N N 346 SGN S1 O3S sing N N 347 SGN O3S HOS3 sing N N 348 SGN S2 O4S doub N N 349 SGN S2 O5S doub N N 350 SGN S2 O6S sing N N 351 SGN O6S HOS6 sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 IDY 1 B IDY 1 D IDY 142 n B 2 SGN 2 B SGN 2 D SGN 141 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SGN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcpNS[6S]a' SGN 'COMMON NAME' GMML 1.0 N-sulfo-6-sulfo-a-D-glucopyranose SGN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNSO36SO3 # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[a2121A-1a_1-5_1*OC_2*OSO/3=O/3=O][a2122h-1a_1-5_2*NSO/3=O/3=O_6*OSO/3=O/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][methyl]{[(1+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 SGN _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 IDY _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 IDY 1 n 2 SGN 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BFC _pdbx_initial_refinement_model.details 'PDB ENTRY 1BFC' #