data_4OFK # _entry.id 4OFK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4OFK RCSB RCSB084429 WWPDB D_1000084429 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4OF0 . unspecified PDB 4OF3 . unspecified PDB 4OF6 . unspecified PDB 4OF7 . unspecified PDB 4OF8 . unspecified PDB 4OFD . unspecified PDB 4OFI . unspecified PDB 4OFP . unspecified PDB 4OFY . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OFK _pdbx_database_status.recvd_initial_deposition_date 2014-01-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ozkan, E.' 1 'Borek, D.' 2 'Otwinowski, Z.' 3 'Garcia, K.C.' 4 # _citation.id primary _citation.title 'Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 156 _citation.page_first 482 _citation.page_last 494 _citation.year 2014 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24485456 _citation.pdbx_database_id_DOI 10.1016/j.cell.2014.01.004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ozkan, E.' 1 ? primary 'Chia, P.H.' 2 ? primary 'Wang, R.R.' 3 ? primary 'Goriatcheva, N.' 4 ? primary 'Borek, D.' 5 ? primary 'Otwinowski, Z.' 6 ? primary 'Walz, T.' 7 ? primary 'Shen, K.' 8 ? primary 'Garcia, K.C.' 9 ? # _cell.entry_id 4OFK _cell.length_a 61.812 _cell.length_b 54.131 _cell.length_c 63.623 _cell.angle_alpha 90.00 _cell.angle_beta 104.61 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OFK _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein SYG-2' 11467.713 2 ? ? 'D4, UNP residues 327-430' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 6 water nat water 18.015 143 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGSVNYPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQREFVVENGIVSSSNVSVHSNELSVE AHQINVECMATNPEGSSAKQHVIKIIAP ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGSVNYPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQREFVVENGIVSSSNVSVHSNELSVE AHQINVECMATNPEGSSAKQHVIKIIAP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 VAL n 1 6 ASN n 1 7 TYR n 1 8 PRO n 1 9 PRO n 1 10 ALA n 1 11 SER n 1 12 VAL n 1 13 GLU n 1 14 LEU n 1 15 PHE n 1 16 GLY n 1 17 GLU n 1 18 SER n 1 19 ASN n 1 20 ILE n 1 21 ARG n 1 22 TYR n 1 23 GLY n 1 24 SER n 1 25 SER n 1 26 ALA n 1 27 ASN n 1 28 ILE n 1 29 GLN n 1 30 CYS n 1 31 LYS n 1 32 SER n 1 33 LEU n 1 34 PRO n 1 35 SER n 1 36 ASN n 1 37 PRO n 1 38 ALA n 1 39 SER n 1 40 GLN n 1 41 ILE n 1 42 THR n 1 43 TRP n 1 44 ILE n 1 45 ILE n 1 46 ASN n 1 47 GLY n 1 48 ARG n 1 49 SER n 1 50 VAL n 1 51 PRO n 1 52 THR n 1 53 PRO n 1 54 THR n 1 55 GLN n 1 56 ARG n 1 57 GLU n 1 58 PHE n 1 59 VAL n 1 60 VAL n 1 61 GLU n 1 62 ASN n 1 63 GLY n 1 64 ILE n 1 65 VAL n 1 66 SER n 1 67 SER n 1 68 SER n 1 69 ASN n 1 70 VAL n 1 71 SER n 1 72 VAL n 1 73 HIS n 1 74 SER n 1 75 ASN n 1 76 GLU n 1 77 LEU n 1 78 SER n 1 79 VAL n 1 80 GLU n 1 81 ALA n 1 82 HIS n 1 83 GLN n 1 84 ILE n 1 85 ASN n 1 86 VAL n 1 87 GLU n 1 88 CYS n 1 89 MET n 1 90 ALA n 1 91 THR n 1 92 ASN n 1 93 PRO n 1 94 GLU n 1 95 GLY n 1 96 SER n 1 97 SER n 1 98 ALA n 1 99 LYS n 1 100 GLN n 1 101 HIS n 1 102 VAL n 1 103 ILE n 1 104 LYS n 1 105 ILE n 1 106 ILE n 1 107 ALA n 1 108 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name nematode _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'C26G2.1, CELE_C26G2.1, syg-2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'High Five' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9U3P2_CAEEL _struct_ref.pdbx_db_accession Q9U3P2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VNYPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQREFVVENGIVSSSNVSVHSNELSVEAHQI NVECMATNPEGSSAKQHVIKIIAP ; _struct_ref.pdbx_align_begin 327 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OFK A 5 ? 108 ? Q9U3P2 327 ? 430 ? 327 430 2 1 4OFK B 5 ? 108 ? Q9U3P2 327 ? 430 ? 327 430 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OFK GLY A 1 ? UNP Q9U3P2 ? ? 'expression tag' 323 1 1 4OFK PRO A 2 ? UNP Q9U3P2 ? ? 'expression tag' 324 2 1 4OFK GLY A 3 ? UNP Q9U3P2 ? ? 'expression tag' 325 3 1 4OFK SER A 4 ? UNP Q9U3P2 ? ? 'expression tag' 326 4 2 4OFK GLY B 1 ? UNP Q9U3P2 ? ? 'expression tag' 323 5 2 4OFK PRO B 2 ? UNP Q9U3P2 ? ? 'expression tag' 324 6 2 4OFK GLY B 3 ? UNP Q9U3P2 ? ? 'expression tag' 325 7 2 4OFK SER B 4 ? UNP Q9U3P2 ? ? 'expression tag' 326 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OFK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pdbx_details '1.3 M Ammonium sulfate, 0.1 M Tris pH 8.3, VAPOR DIFFUSION, SITTING DROP, temperature 295.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2011-07-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.16962 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.16962 # _reflns.entry_id 4OFK _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.8 _reflns.number_obs 18855 _reflns.number_all 18857 _reflns.percent_possible_obs 100 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 24.3 _reflns.B_iso_Wilson_estimate 23.11 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4OFK _refine.ls_number_reflns_obs 18854 _refine.ls_number_reflns_all 18854 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.135 _refine.ls_d_res_high 1.802 _refine.ls_percent_reflns_obs 99.81 _refine.ls_R_factor_obs 0.1923 _refine.ls_R_factor_all 0.1923 _refine.ls_R_factor_R_work 0.1913 _refine.ls_R_factor_R_free 0.2106 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.93 _refine.ls_number_reflns_R_free 930 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.pdbx_overall_phase_error 21.11 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1559 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 1744 _refine_hist.d_res_high 1.802 _refine_hist.d_res_low 40.135 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.005 ? ? 1666 ? 'X-RAY DIFFRACTION' f_angle_d 1.044 ? ? 2277 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.011 ? ? 615 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.043 ? ? 268 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 301 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.802 1.8975 2492 0.2382 99.00 0.2380 . . 136 . . . . 'X-RAY DIFFRACTION' . 1.8975 2.0163 2554 0.2093 100.00 0.2347 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.0163 2.1720 2559 0.1993 100.00 0.2224 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.1720 2.3906 2532 0.1934 100.00 0.2144 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.3906 2.7364 2585 0.1932 100.00 0.2161 . . 115 . . . . 'X-RAY DIFFRACTION' . 2.7364 3.4473 2581 0.1952 100.00 0.2476 . . 126 . . . . 'X-RAY DIFFRACTION' . 3.4473 40.1453 2621 0.1771 100.00 0.1781 . . 130 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4OFK _struct.title 'Crystal Structure of SYG-2 D4' _struct.pdbx_descriptor 'Protein SYG-2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OFK _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;Immunoglobulin superfamily, Cell adhesion, Synaptogenesis, Protein Binding, N-linked Glycosylation, Membrane, Extracellular, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 5 ? H N N 4 ? I N N 6 ? J N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id B _struct_conf.beg_label_seq_id 75 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id B _struct_conf.end_label_seq_id 77 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id B _struct_conf.beg_auth_seq_id 397 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id B _struct_conf.end_auth_seq_id 399 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 352 A CYS 410 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf2 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 88 SG ? ? B CYS 352 B CYS 410 1_555 ? ? ? ? ? ? ? 2.016 ? ? covale1 covale one ? A ASN 69 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 391 A NAG 901 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation covale2 covale one ? B ASN 69 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 391 B NAG 901 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 36 A . ? ASN 358 A PRO 37 A ? PRO 359 A 1 0.46 2 ASN 36 B . ? ASN 358 B PRO 37 B ? PRO 359 B 1 0.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 8 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 12 ? GLY A 16 ? VAL A 334 GLY A 338 A 2 SER A 25 ? SER A 32 ? SER A 347 SER A 354 A 3 ILE A 64 ? HIS A 73 ? ILE A 386 HIS A 395 A 4 ARG A 56 ? VAL A 59 ? ARG A 378 VAL A 381 B 1 ASN A 19 ? ARG A 21 ? ASN A 341 ARG A 343 B 2 GLY A 95 ? ILE A 106 ? GLY A 417 ILE A 428 B 3 GLY B 95 ? ILE B 106 ? GLY B 417 ILE B 428 B 4 ASN B 19 ? ARG B 21 ? ASN B 341 ARG B 343 C 1 ARG A 48 ? VAL A 50 ? ARG A 370 VAL A 372 C 2 GLN A 40 ? ILE A 45 ? GLN A 362 ILE A 367 C 3 GLN A 83 ? ASN A 92 ? GLN A 405 ASN A 414 C 4 GLY A 95 ? ILE A 106 ? GLY A 417 ILE A 428 C 5 GLY B 95 ? ILE B 106 ? GLY B 417 ILE B 428 C 6 GLN B 83 ? ASN B 92 ? GLN B 405 ASN B 414 C 7 GLN B 40 ? ILE B 45 ? GLN B 362 ILE B 367 C 8 ARG B 48 ? SER B 49 ? ARG B 370 SER B 371 D 1 VAL B 12 ? PHE B 15 ? VAL B 334 PHE B 337 D 2 SER B 25 ? SER B 32 ? SER B 347 SER B 354 D 3 GLY B 63 ? HIS B 73 ? GLY B 385 HIS B 395 D 4 ARG B 56 ? VAL B 60 ? ARG B 378 VAL B 382 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 13 ? N GLU A 335 O LYS A 31 ? O LYS A 353 A 2 3 N SER A 32 ? N SER A 354 O SER A 66 ? O SER A 388 A 3 4 O SER A 67 ? O SER A 389 N ARG A 56 ? N ARG A 378 B 1 2 N ILE A 20 ? N ILE A 342 O LYS A 104 ? O LYS A 426 B 2 3 N SER A 96 ? N SER A 418 O ALA B 98 ? O ALA B 420 B 3 4 O ILE B 106 ? O ILE B 428 N ILE B 20 ? N ILE B 342 C 1 2 O ARG A 48 ? O ARG A 370 N ILE A 45 ? N ILE A 367 C 2 3 N GLN A 40 ? N GLN A 362 O THR A 91 ? O THR A 413 C 3 4 N VAL A 86 ? N VAL A 408 O HIS A 101 ? O HIS A 423 C 4 5 N SER A 96 ? N SER A 418 O ALA B 98 ? O ALA B 420 C 5 6 O HIS B 101 ? O HIS B 423 N VAL B 86 ? N VAL B 408 C 6 7 O GLU B 87 ? O GLU B 409 N ILE B 44 ? N ILE B 366 C 7 8 N ILE B 45 ? N ILE B 367 O ARG B 48 ? O ARG B 370 D 1 2 N PHE B 15 ? N PHE B 337 O GLN B 29 ? O GLN B 351 D 2 3 N ALA B 26 ? N ALA B 348 O VAL B 72 ? O VAL B 394 D 3 4 O VAL B 65 ? O VAL B 387 N PHE B 58 ? N PHE B 380 # _database_PDB_matrix.entry_id 4OFK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OFK _atom_sites.fract_transf_matrix[1][1] 0.016178 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004217 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018474 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016243 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 323 ? ? ? A . n A 1 2 PRO 2 324 ? ? ? A . n A 1 3 GLY 3 325 ? ? ? A . n A 1 4 SER 4 326 ? ? ? A . n A 1 5 VAL 5 327 327 VAL VAL A . n A 1 6 ASN 6 328 328 ASN ASN A . n A 1 7 TYR 7 329 329 TYR TYR A . n A 1 8 PRO 8 330 330 PRO PRO A . n A 1 9 PRO 9 331 331 PRO PRO A . n A 1 10 ALA 10 332 332 ALA ALA A . n A 1 11 SER 11 333 333 SER SER A . n A 1 12 VAL 12 334 334 VAL VAL A . n A 1 13 GLU 13 335 335 GLU GLU A . n A 1 14 LEU 14 336 336 LEU LEU A . n A 1 15 PHE 15 337 337 PHE PHE A . n A 1 16 GLY 16 338 338 GLY GLY A . n A 1 17 GLU 17 339 339 GLU GLU A . n A 1 18 SER 18 340 340 SER SER A . n A 1 19 ASN 19 341 341 ASN ASN A . n A 1 20 ILE 20 342 342 ILE ILE A . n A 1 21 ARG 21 343 343 ARG ARG A . n A 1 22 TYR 22 344 344 TYR TYR A . n A 1 23 GLY 23 345 345 GLY GLY A . n A 1 24 SER 24 346 346 SER SER A . n A 1 25 SER 25 347 347 SER SER A . n A 1 26 ALA 26 348 348 ALA ALA A . n A 1 27 ASN 27 349 349 ASN ASN A . n A 1 28 ILE 28 350 350 ILE ILE A . n A 1 29 GLN 29 351 351 GLN GLN A . n A 1 30 CYS 30 352 352 CYS CYS A . n A 1 31 LYS 31 353 353 LYS LYS A . n A 1 32 SER 32 354 354 SER SER A . n A 1 33 LEU 33 355 355 LEU LEU A . n A 1 34 PRO 34 356 356 PRO PRO A . n A 1 35 SER 35 357 357 SER SER A . n A 1 36 ASN 36 358 358 ASN ASN A . n A 1 37 PRO 37 359 359 PRO PRO A . n A 1 38 ALA 38 360 360 ALA ALA A . n A 1 39 SER 39 361 361 SER SER A . n A 1 40 GLN 40 362 362 GLN GLN A . n A 1 41 ILE 41 363 363 ILE ILE A . n A 1 42 THR 42 364 364 THR THR A . n A 1 43 TRP 43 365 365 TRP TRP A . n A 1 44 ILE 44 366 366 ILE ILE A . n A 1 45 ILE 45 367 367 ILE ILE A . n A 1 46 ASN 46 368 368 ASN ASN A . n A 1 47 GLY 47 369 369 GLY GLY A . n A 1 48 ARG 48 370 370 ARG ARG A . n A 1 49 SER 49 371 371 SER SER A . n A 1 50 VAL 50 372 372 VAL VAL A . n A 1 51 PRO 51 373 373 PRO PRO A . n A 1 52 THR 52 374 374 THR THR A . n A 1 53 PRO 53 375 375 PRO PRO A . n A 1 54 THR 54 376 376 THR THR A . n A 1 55 GLN 55 377 377 GLN GLN A . n A 1 56 ARG 56 378 378 ARG ARG A . n A 1 57 GLU 57 379 379 GLU GLU A . n A 1 58 PHE 58 380 380 PHE PHE A . n A 1 59 VAL 59 381 381 VAL VAL A . n A 1 60 VAL 60 382 382 VAL VAL A . n A 1 61 GLU 61 383 383 GLU GLU A . n A 1 62 ASN 62 384 384 ASN ASN A . n A 1 63 GLY 63 385 385 GLY GLY A . n A 1 64 ILE 64 386 386 ILE ILE A . n A 1 65 VAL 65 387 387 VAL VAL A . n A 1 66 SER 66 388 388 SER SER A . n A 1 67 SER 67 389 389 SER SER A . n A 1 68 SER 68 390 390 SER SER A . n A 1 69 ASN 69 391 391 ASN ASN A . n A 1 70 VAL 70 392 392 VAL VAL A . n A 1 71 SER 71 393 393 SER SER A . n A 1 72 VAL 72 394 394 VAL VAL A . n A 1 73 HIS 73 395 395 HIS HIS A . n A 1 74 SER 74 396 396 SER SER A . n A 1 75 ASN 75 397 397 ASN ASN A . n A 1 76 GLU 76 398 398 GLU GLU A . n A 1 77 LEU 77 399 399 LEU LEU A . n A 1 78 SER 78 400 400 SER SER A . n A 1 79 VAL 79 401 401 VAL VAL A . n A 1 80 GLU 80 402 402 GLU GLU A . n A 1 81 ALA 81 403 403 ALA ALA A . n A 1 82 HIS 82 404 404 HIS HIS A . n A 1 83 GLN 83 405 405 GLN GLN A . n A 1 84 ILE 84 406 406 ILE ILE A . n A 1 85 ASN 85 407 407 ASN ASN A . n A 1 86 VAL 86 408 408 VAL VAL A . n A 1 87 GLU 87 409 409 GLU GLU A . n A 1 88 CYS 88 410 410 CYS CYS A . n A 1 89 MET 89 411 411 MET MET A . n A 1 90 ALA 90 412 412 ALA ALA A . n A 1 91 THR 91 413 413 THR THR A . n A 1 92 ASN 92 414 414 ASN ASN A . n A 1 93 PRO 93 415 415 PRO PRO A . n A 1 94 GLU 94 416 416 GLU GLU A . n A 1 95 GLY 95 417 417 GLY GLY A . n A 1 96 SER 96 418 418 SER SER A . n A 1 97 SER 97 419 419 SER SER A . n A 1 98 ALA 98 420 420 ALA ALA A . n A 1 99 LYS 99 421 421 LYS LYS A . n A 1 100 GLN 100 422 422 GLN GLN A . n A 1 101 HIS 101 423 423 HIS HIS A . n A 1 102 VAL 102 424 424 VAL VAL A . n A 1 103 ILE 103 425 425 ILE ILE A . n A 1 104 LYS 104 426 426 LYS LYS A . n A 1 105 ILE 105 427 427 ILE ILE A . n A 1 106 ILE 106 428 428 ILE ILE A . n A 1 107 ALA 107 429 429 ALA ALA A . n A 1 108 PRO 108 430 ? ? ? A . n B 1 1 GLY 1 323 ? ? ? B . n B 1 2 PRO 2 324 ? ? ? B . n B 1 3 GLY 3 325 ? ? ? B . n B 1 4 SER 4 326 ? ? ? B . n B 1 5 VAL 5 327 327 VAL VAL B . n B 1 6 ASN 6 328 328 ASN ASN B . n B 1 7 TYR 7 329 329 TYR TYR B . n B 1 8 PRO 8 330 330 PRO PRO B . n B 1 9 PRO 9 331 331 PRO PRO B . n B 1 10 ALA 10 332 332 ALA ALA B . n B 1 11 SER 11 333 333 SER SER B . n B 1 12 VAL 12 334 334 VAL VAL B . n B 1 13 GLU 13 335 335 GLU GLU B . n B 1 14 LEU 14 336 336 LEU LEU B . n B 1 15 PHE 15 337 337 PHE PHE B . n B 1 16 GLY 16 338 338 GLY GLY B . n B 1 17 GLU 17 339 339 GLU GLU B . n B 1 18 SER 18 340 340 SER SER B . n B 1 19 ASN 19 341 341 ASN ASN B . n B 1 20 ILE 20 342 342 ILE ILE B . n B 1 21 ARG 21 343 343 ARG ARG B . n B 1 22 TYR 22 344 344 TYR TYR B . n B 1 23 GLY 23 345 345 GLY GLY B . n B 1 24 SER 24 346 346 SER SER B . n B 1 25 SER 25 347 347 SER SER B . n B 1 26 ALA 26 348 348 ALA ALA B . n B 1 27 ASN 27 349 349 ASN ASN B . n B 1 28 ILE 28 350 350 ILE ILE B . n B 1 29 GLN 29 351 351 GLN GLN B . n B 1 30 CYS 30 352 352 CYS CYS B . n B 1 31 LYS 31 353 353 LYS LYS B . n B 1 32 SER 32 354 354 SER SER B . n B 1 33 LEU 33 355 355 LEU LEU B . n B 1 34 PRO 34 356 356 PRO PRO B . n B 1 35 SER 35 357 357 SER SER B . n B 1 36 ASN 36 358 358 ASN ASN B . n B 1 37 PRO 37 359 359 PRO PRO B . n B 1 38 ALA 38 360 360 ALA ALA B . n B 1 39 SER 39 361 361 SER SER B . n B 1 40 GLN 40 362 362 GLN GLN B . n B 1 41 ILE 41 363 363 ILE ILE B . n B 1 42 THR 42 364 364 THR THR B . n B 1 43 TRP 43 365 365 TRP TRP B . n B 1 44 ILE 44 366 366 ILE ILE B . n B 1 45 ILE 45 367 367 ILE ILE B . n B 1 46 ASN 46 368 368 ASN ASN B . n B 1 47 GLY 47 369 369 GLY GLY B . n B 1 48 ARG 48 370 370 ARG ARG B . n B 1 49 SER 49 371 371 SER SER B . n B 1 50 VAL 50 372 372 VAL VAL B . n B 1 51 PRO 51 373 373 PRO PRO B . n B 1 52 THR 52 374 374 THR THR B . n B 1 53 PRO 53 375 375 PRO PRO B . n B 1 54 THR 54 376 376 THR THR B . n B 1 55 GLN 55 377 377 GLN GLN B . n B 1 56 ARG 56 378 378 ARG ARG B . n B 1 57 GLU 57 379 379 GLU GLU B . n B 1 58 PHE 58 380 380 PHE PHE B . n B 1 59 VAL 59 381 381 VAL VAL B . n B 1 60 VAL 60 382 382 VAL VAL B . n B 1 61 GLU 61 383 383 GLU GLU B . n B 1 62 ASN 62 384 384 ASN ASN B . n B 1 63 GLY 63 385 385 GLY GLY B . n B 1 64 ILE 64 386 386 ILE ILE B . n B 1 65 VAL 65 387 387 VAL VAL B . n B 1 66 SER 66 388 388 SER SER B . n B 1 67 SER 67 389 389 SER SER B . n B 1 68 SER 68 390 390 SER SER B . n B 1 69 ASN 69 391 391 ASN ASN B . n B 1 70 VAL 70 392 392 VAL VAL B . n B 1 71 SER 71 393 393 SER SER B . n B 1 72 VAL 72 394 394 VAL VAL B . n B 1 73 HIS 73 395 395 HIS HIS B . n B 1 74 SER 74 396 396 SER SER B . n B 1 75 ASN 75 397 397 ASN ASN B . n B 1 76 GLU 76 398 398 GLU GLU B . n B 1 77 LEU 77 399 399 LEU LEU B . n B 1 78 SER 78 400 400 SER SER B . n B 1 79 VAL 79 401 401 VAL VAL B . n B 1 80 GLU 80 402 402 GLU GLU B . n B 1 81 ALA 81 403 403 ALA ALA B . n B 1 82 HIS 82 404 404 HIS HIS B . n B 1 83 GLN 83 405 405 GLN GLN B . n B 1 84 ILE 84 406 406 ILE ILE B . n B 1 85 ASN 85 407 407 ASN ASN B . n B 1 86 VAL 86 408 408 VAL VAL B . n B 1 87 GLU 87 409 409 GLU GLU B . n B 1 88 CYS 88 410 410 CYS CYS B . n B 1 89 MET 89 411 411 MET MET B . n B 1 90 ALA 90 412 412 ALA ALA B . n B 1 91 THR 91 413 413 THR THR B . n B 1 92 ASN 92 414 414 ASN ASN B . n B 1 93 PRO 93 415 415 PRO PRO B . n B 1 94 GLU 94 416 416 GLU GLU B . n B 1 95 GLY 95 417 417 GLY GLY B . n B 1 96 SER 96 418 418 SER SER B . n B 1 97 SER 97 419 419 SER SER B . n B 1 98 ALA 98 420 420 ALA ALA B . n B 1 99 LYS 99 421 421 LYS LYS B . n B 1 100 GLN 100 422 422 GLN GLN B . n B 1 101 HIS 101 423 423 HIS HIS B . n B 1 102 VAL 102 424 424 VAL VAL B . n B 1 103 ILE 103 425 425 ILE ILE B . n B 1 104 LYS 104 426 426 LYS LYS B . n B 1 105 ILE 105 427 427 ILE ILE B . n B 1 106 ILE 106 428 428 ILE ILE B . n B 1 107 ALA 107 429 429 ALA ALA B . n B 1 108 PRO 108 430 430 PRO PRO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 901 901 NAG NAG A . D 3 CL 1 902 1 CL CL A . E 4 EDO 1 903 1 EDO EDO A . F 2 NAG 1 901 901 NAG NAG B . G 5 SO4 1 902 1 SO4 SO4 B . H 4 EDO 1 903 1 EDO EDO B . I 6 HOH 1 1001 1 HOH HOH A . I 6 HOH 2 1002 2 HOH HOH A . I 6 HOH 3 1003 3 HOH HOH A . I 6 HOH 4 1004 5 HOH HOH A . I 6 HOH 5 1005 6 HOH HOH A . I 6 HOH 6 1006 9 HOH HOH A . I 6 HOH 7 1007 11 HOH HOH A . I 6 HOH 8 1008 12 HOH HOH A . I 6 HOH 9 1009 15 HOH HOH A . I 6 HOH 10 1010 18 HOH HOH A . I 6 HOH 11 1011 19 HOH HOH A . I 6 HOH 12 1012 21 HOH HOH A . I 6 HOH 13 1013 22 HOH HOH A . I 6 HOH 14 1014 23 HOH HOH A . I 6 HOH 15 1015 29 HOH HOH A . I 6 HOH 16 1016 32 HOH HOH A . I 6 HOH 17 1017 33 HOH HOH A . I 6 HOH 18 1018 34 HOH HOH A . I 6 HOH 19 1019 35 HOH HOH A . I 6 HOH 20 1020 36 HOH HOH A . I 6 HOH 21 1021 39 HOH HOH A . I 6 HOH 22 1022 41 HOH HOH A . I 6 HOH 23 1023 44 HOH HOH A . I 6 HOH 24 1024 45 HOH HOH A . I 6 HOH 25 1025 47 HOH HOH A . I 6 HOH 26 1026 48 HOH HOH A . I 6 HOH 27 1027 49 HOH HOH A . I 6 HOH 28 1028 54 HOH HOH A . I 6 HOH 29 1029 55 HOH HOH A . I 6 HOH 30 1030 56 HOH HOH A . I 6 HOH 31 1031 57 HOH HOH A . I 6 HOH 32 1032 58 HOH HOH A . I 6 HOH 33 1033 59 HOH HOH A . I 6 HOH 34 1034 61 HOH HOH A . I 6 HOH 35 1035 63 HOH HOH A . I 6 HOH 36 1036 64 HOH HOH A . I 6 HOH 37 1037 65 HOH HOH A . I 6 HOH 38 1038 66 HOH HOH A . I 6 HOH 39 1039 67 HOH HOH A . I 6 HOH 40 1040 68 HOH HOH A . I 6 HOH 41 1041 69 HOH HOH A . I 6 HOH 42 1042 70 HOH HOH A . I 6 HOH 43 1043 73 HOH HOH A . I 6 HOH 44 1044 76 HOH HOH A . I 6 HOH 45 1045 78 HOH HOH A . I 6 HOH 46 1046 79 HOH HOH A . I 6 HOH 47 1047 84 HOH HOH A . I 6 HOH 48 1048 89 HOH HOH A . I 6 HOH 49 1049 90 HOH HOH A . I 6 HOH 50 1050 92 HOH HOH A . I 6 HOH 51 1051 93 HOH HOH A . I 6 HOH 52 1052 94 HOH HOH A . I 6 HOH 53 1053 100 HOH HOH A . I 6 HOH 54 1054 103 HOH HOH A . I 6 HOH 55 1055 106 HOH HOH A . I 6 HOH 56 1056 109 HOH HOH A . I 6 HOH 57 1057 111 HOH HOH A . I 6 HOH 58 1058 117 HOH HOH A . I 6 HOH 59 1059 118 HOH HOH A . I 6 HOH 60 1060 119 HOH HOH A . I 6 HOH 61 1061 120 HOH HOH A . I 6 HOH 62 1062 121 HOH HOH A . I 6 HOH 63 1063 123 HOH HOH A . I 6 HOH 64 1064 124 HOH HOH A . I 6 HOH 65 1065 125 HOH HOH A . I 6 HOH 66 1066 126 HOH HOH A . I 6 HOH 67 1067 127 HOH HOH A . I 6 HOH 68 1068 128 HOH HOH A . I 6 HOH 69 1069 131 HOH HOH A . I 6 HOH 70 1070 132 HOH HOH A . I 6 HOH 71 1071 133 HOH HOH A . I 6 HOH 72 1072 134 HOH HOH A . I 6 HOH 73 1073 136 HOH HOH A . I 6 HOH 74 1074 138 HOH HOH A . I 6 HOH 75 1075 139 HOH HOH A . I 6 HOH 76 1076 141 HOH HOH A . I 6 HOH 77 1077 142 HOH HOH A . J 6 HOH 1 1001 4 HOH HOH B . J 6 HOH 2 1002 7 HOH HOH B . J 6 HOH 3 1003 8 HOH HOH B . J 6 HOH 4 1004 10 HOH HOH B . J 6 HOH 5 1005 13 HOH HOH B . J 6 HOH 6 1006 14 HOH HOH B . J 6 HOH 7 1007 16 HOH HOH B . J 6 HOH 8 1008 17 HOH HOH B . J 6 HOH 9 1009 20 HOH HOH B . J 6 HOH 10 1010 24 HOH HOH B . J 6 HOH 11 1011 25 HOH HOH B . J 6 HOH 12 1012 26 HOH HOH B . J 6 HOH 13 1013 27 HOH HOH B . J 6 HOH 14 1014 28 HOH HOH B . J 6 HOH 15 1015 30 HOH HOH B . J 6 HOH 16 1016 31 HOH HOH B . J 6 HOH 17 1017 37 HOH HOH B . J 6 HOH 18 1018 38 HOH HOH B . J 6 HOH 19 1019 40 HOH HOH B . J 6 HOH 20 1020 42 HOH HOH B . J 6 HOH 21 1021 43 HOH HOH B . J 6 HOH 22 1022 46 HOH HOH B . J 6 HOH 23 1023 50 HOH HOH B . J 6 HOH 24 1024 51 HOH HOH B . J 6 HOH 25 1025 52 HOH HOH B . J 6 HOH 26 1026 53 HOH HOH B . J 6 HOH 27 1027 60 HOH HOH B . J 6 HOH 28 1028 62 HOH HOH B . J 6 HOH 29 1029 71 HOH HOH B . J 6 HOH 30 1030 72 HOH HOH B . J 6 HOH 31 1031 74 HOH HOH B . J 6 HOH 32 1032 75 HOH HOH B . J 6 HOH 33 1033 77 HOH HOH B . J 6 HOH 34 1034 80 HOH HOH B . J 6 HOH 35 1035 81 HOH HOH B . J 6 HOH 36 1036 82 HOH HOH B . J 6 HOH 37 1037 83 HOH HOH B . J 6 HOH 38 1038 85 HOH HOH B . J 6 HOH 39 1039 86 HOH HOH B . J 6 HOH 40 1040 87 HOH HOH B . J 6 HOH 41 1041 88 HOH HOH B . J 6 HOH 42 1042 91 HOH HOH B . J 6 HOH 43 1043 95 HOH HOH B . J 6 HOH 44 1044 96 HOH HOH B . J 6 HOH 45 1045 97 HOH HOH B . J 6 HOH 46 1046 98 HOH HOH B . J 6 HOH 47 1047 99 HOH HOH B . J 6 HOH 48 1048 101 HOH HOH B . J 6 HOH 49 1049 102 HOH HOH B . J 6 HOH 50 1050 104 HOH HOH B . J 6 HOH 51 1051 105 HOH HOH B . J 6 HOH 52 1052 107 HOH HOH B . J 6 HOH 53 1053 108 HOH HOH B . J 6 HOH 54 1054 110 HOH HOH B . J 6 HOH 55 1055 112 HOH HOH B . J 6 HOH 56 1056 113 HOH HOH B . J 6 HOH 57 1057 114 HOH HOH B . J 6 HOH 58 1058 115 HOH HOH B . J 6 HOH 59 1059 116 HOH HOH B . J 6 HOH 60 1060 122 HOH HOH B . J 6 HOH 61 1061 129 HOH HOH B . J 6 HOH 62 1062 130 HOH HOH B . J 6 HOH 63 1063 135 HOH HOH B . J 6 HOH 64 1064 137 HOH HOH B . J 6 HOH 65 1065 140 HOH HOH B . J 6 HOH 66 1066 143 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 69 B ASN 391 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 69 A ASN 391 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,I 2 1 B,F,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 1032 ? I HOH . 2 1 A HOH 1052 ? I HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-19 2 'Structure model' 1 1 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site 8 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_entity_nonpoly.name' 5 2 'Structure model' '_struct_conn.pdbx_dist_value' 6 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 2 'Structure model' '_struct_conn.pdbx_role' 8 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 9 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 11 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -6.3084 -12.4192 -15.6384 0.2432 0.2166 0.2204 0.0367 -0.0140 -0.0378 1.6207 4.3248 7.0266 0.9833 -0.4712 -2.8400 -0.0510 0.1138 -0.1966 -0.1941 0.1070 -0.0473 0.8872 -0.8092 -0.0202 'X-RAY DIFFRACTION' 2 ? refined -0.7277 -10.2202 -20.4762 0.2109 0.1952 0.1905 0.1187 -0.0016 -0.0288 1.9425 2.5778 6.8835 2.0105 -2.1913 -1.7997 -0.2103 0.0892 -0.3389 -0.0238 0.0311 -0.4349 0.5197 -0.1543 0.1169 'X-RAY DIFFRACTION' 3 ? refined 1.3822 -7.1616 -12.1891 0.1950 0.1985 0.1584 0.0680 -0.0107 0.0193 3.3753 2.8874 2.0324 2.7225 -5.7853 -4.0909 0.0538 -0.4014 0.0697 0.0314 -0.2013 -0.0449 -0.3312 0.1336 0.1083 'X-RAY DIFFRACTION' 4 ? refined 2.2479 -8.9337 -7.5575 0.2595 0.2959 0.1771 0.1004 0.0085 0.0153 6.0885 0.7763 0.4058 -0.0465 -1.4479 0.2529 -0.2001 -1.1884 -0.0048 0.1535 0.1589 -0.1756 0.4825 0.7585 -0.0626 'X-RAY DIFFRACTION' 5 ? refined 3.8504 -10.2951 -29.5249 0.2720 0.2826 0.2073 0.1097 0.0202 -0.0669 5.9273 6.5917 9.6514 -0.1615 1.6022 -2.2808 -0.3695 0.5948 0.0164 -0.7325 -0.4846 -0.0295 -0.3876 -0.8784 0.4842 'X-RAY DIFFRACTION' 6 ? refined 0.8058 -14.5000 -15.3724 0.2697 0.2329 0.1642 0.0995 0.0007 -0.0063 1.8423 3.7623 2.0750 2.5583 -4.5568 -5.5303 0.1001 -0.2215 -0.1746 0.1086 -0.2252 -0.2215 0.5917 0.2643 0.2148 'X-RAY DIFFRACTION' 7 ? refined -8.4578 -14.8082 2.2754 0.3232 0.2613 0.1622 -0.0615 0.0228 0.0442 9.3275 5.6120 2.7675 -0.8958 0.8744 1.7399 0.2015 -0.5978 0.0833 0.4202 0.1392 0.0142 0.2115 -0.5198 -0.2416 'X-RAY DIFFRACTION' 8 ? refined -6.7368 -8.4878 -8.9016 0.2361 0.1794 0.2106 0.1061 0.0720 0.0629 2.0030 2.0182 1.9963 2.0020 1.9782 1.9995 0.5541 0.3121 0.5470 0.2406 0.2095 0.5920 -0.9896 -0.7920 -0.7133 'X-RAY DIFFRACTION' 9 ? refined 0.5326 0.8332 -19.3807 0.1890 0.1478 0.1534 0.0818 -0.0013 -0.0205 8.3861 5.0734 3.2120 2.2067 -2.3488 -0.4385 0.1382 0.0812 0.3956 0.0431 0.0219 0.1735 -0.4179 -0.0418 -0.2221 'X-RAY DIFFRACTION' 10 ? refined -12.6386 -14.6700 -7.6161 0.4133 0.3153 0.2488 -0.0280 0.0418 0.0340 9.1344 9.4859 7.1991 4.6859 -3.1416 -8.1745 0.5862 -0.4592 -0.1646 0.8728 0.0896 0.9324 0.2070 -0.8299 -0.4312 'X-RAY DIFFRACTION' 11 ? refined -5.1645 15.8902 -18.6960 0.2482 0.2521 0.2460 0.1199 -0.0293 -0.0249 2.6537 7.8217 2.1173 3.4572 0.5128 2.3815 -0.1323 0.0984 0.3016 -0.2492 0.2213 0.2039 -0.3414 0.1755 0.0376 'X-RAY DIFFRACTION' 12 ? refined -6.8807 12.8937 -14.5401 0.3016 0.2943 0.2167 0.1322 -0.0292 -0.0541 4.3885 4.4236 0.7617 0.6231 -1.1062 -0.4327 0.1242 -0.4379 0.3489 0.6234 0.0580 -0.2796 -0.1343 0.1663 -0.1486 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 327:346) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 347:361) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 362:367) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 368:377) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 378:385) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 386:395) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 396:405) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 406:410) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 411:420) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 421:429) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 327:354) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 355:430) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 SHELX 'model building' . ? 2 PHASER phasing . ? 3 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 SHELX phasing . ? 7 MOLREP phasing . ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 1054 ? ? O B HOH 1056 ? ? 1.83 2 1 O A HOH 1070 ? ? O A HOH 1076 ? ? 1.90 3 1 O B HOH 1041 ? ? O B HOH 1062 ? ? 1.94 4 1 O B HOH 1028 ? ? O B HOH 1052 ? ? 1.96 5 1 O A HOH 1048 ? ? O B HOH 1039 ? ? 1.99 6 1 O B HOH 1036 ? ? O B HOH 1049 ? ? 1.99 7 1 O A HOH 1011 ? ? O A HOH 1067 ? ? 2.05 8 1 OG A SER 347 ? ? O A HOH 1024 ? ? 2.06 9 1 O A HOH 1049 ? ? O A HOH 1063 ? ? 2.08 10 1 O7 A NAG 901 ? ? O A HOH 1069 ? ? 2.09 11 1 O A HOH 1059 ? ? O A HOH 1070 ? ? 2.16 12 1 ND2 B ASN 391 ? ? O5 B NAG 901 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 333 ? ? -169.26 -167.91 2 1 SER B 333 ? ? -169.73 -167.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 323 ? A GLY 1 2 1 Y 1 A PRO 324 ? A PRO 2 3 1 Y 1 A GLY 325 ? A GLY 3 4 1 Y 1 A SER 326 ? A SER 4 5 1 Y 1 A PRO 430 ? A PRO 108 6 1 Y 1 B GLY 323 ? B GLY 1 7 1 Y 1 B PRO 324 ? B PRO 2 8 1 Y 1 B GLY 325 ? B GLY 3 9 1 Y 1 B SER 326 ? B SER 4 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'CHLORIDE ION' CL 4 1,2-ETHANEDIOL EDO 5 'SULFATE ION' SO4 6 water HOH #