HEADER CELL ADHESION 15-JAN-14 4OFK TITLE CRYSTAL STRUCTURE OF SYG-2 D4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SYG-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: D4, UNP RESIDUES 327-430; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: C26G2.1, CELE_C26G2.1, SYG-2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IMMUNOGLOBULIN SUPERFAMILY, CELL ADHESION, SYNAPTOGENESIS, PROTEIN KEYWDS 2 BINDING, N-LINKED GLYCOSYLATION, MEMBRANE, EXTRACELLULAR, SIGNALING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.OZKAN,D.BOREK,Z.OTWINOWSKI,K.C.GARCIA REVDAT 2 29-JUL-20 4OFK 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 19-FEB-14 4OFK 0 JRNL AUTH E.OZKAN,P.H.CHIA,R.R.WANG,N.GORIATCHEVA,D.BOREK, JRNL AUTH 2 Z.OTWINOWSKI,T.WALZ,K.SHEN,K.C.GARCIA JRNL TITL EXTRACELLULAR ARCHITECTURE OF THE SYG-1/SYG-2 ADHESION JRNL TITL 2 COMPLEX INSTRUCTS SYNAPTOGENESIS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 156 482 2014 JRNL REFN ISSN 0092-8674 JRNL PMID 24485456 JRNL DOI 10.1016/J.CELL.2014.01.004 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1453 - 3.4473 1.00 2621 130 0.1771 0.1781 REMARK 3 2 3.4473 - 2.7364 1.00 2581 126 0.1952 0.2476 REMARK 3 3 2.7364 - 2.3906 1.00 2585 115 0.1932 0.2161 REMARK 3 4 2.3906 - 2.1720 1.00 2532 147 0.1934 0.2144 REMARK 3 5 2.1720 - 2.0163 1.00 2559 139 0.1993 0.2224 REMARK 3 6 2.0163 - 1.8975 1.00 2554 137 0.2093 0.2347 REMARK 3 7 1.8975 - 1.8020 0.99 2492 136 0.2382 0.2380 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1666 REMARK 3 ANGLE : 1.044 2277 REMARK 3 CHIRALITY : 0.043 268 REMARK 3 PLANARITY : 0.006 301 REMARK 3 DIHEDRAL : 14.011 615 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 327:346) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3084 -12.4192 -15.6384 REMARK 3 T TENSOR REMARK 3 T11: 0.2432 T22: 0.2166 REMARK 3 T33: 0.2204 T12: 0.0367 REMARK 3 T13: -0.0140 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 1.6207 L22: 4.3248 REMARK 3 L33: 7.0266 L12: 0.9833 REMARK 3 L13: -0.4712 L23: -2.8400 REMARK 3 S TENSOR REMARK 3 S11: -0.0510 S12: 0.1138 S13: -0.1966 REMARK 3 S21: -0.1941 S22: 0.1070 S23: -0.0473 REMARK 3 S31: 0.8872 S32: -0.8092 S33: -0.0202 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 347:361) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7277 -10.2202 -20.4762 REMARK 3 T TENSOR REMARK 3 T11: 0.2109 T22: 0.1952 REMARK 3 T33: 0.1905 T12: 0.1187 REMARK 3 T13: -0.0016 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 1.9425 L22: 2.5778 REMARK 3 L33: 6.8835 L12: 2.0105 REMARK 3 L13: -2.1913 L23: -1.7997 REMARK 3 S TENSOR REMARK 3 S11: -0.2103 S12: 0.0892 S13: -0.3389 REMARK 3 S21: -0.0238 S22: 0.0311 S23: -0.4349 REMARK 3 S31: 0.5197 S32: -0.1543 S33: 0.1169 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 362:367) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3822 -7.1616 -12.1891 REMARK 3 T TENSOR REMARK 3 T11: 0.1950 T22: 0.1985 REMARK 3 T33: 0.1584 T12: 0.0680 REMARK 3 T13: -0.0107 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 3.3753 L22: 2.8874 REMARK 3 L33: 2.0324 L12: 2.7225 REMARK 3 L13: -5.7853 L23: -4.0909 REMARK 3 S TENSOR REMARK 3 S11: 0.0538 S12: -0.4014 S13: 0.0697 REMARK 3 S21: 0.0314 S22: -0.2013 S23: -0.0449 REMARK 3 S31: -0.3312 S32: 0.1336 S33: 0.1083 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 368:377) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2479 -8.9337 -7.5575 REMARK 3 T TENSOR REMARK 3 T11: 0.2595 T22: 0.2959 REMARK 3 T33: 0.1771 T12: 0.1004 REMARK 3 T13: 0.0085 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 6.0885 L22: 0.7763 REMARK 3 L33: 0.4058 L12: -0.0465 REMARK 3 L13: -1.4479 L23: 0.2529 REMARK 3 S TENSOR REMARK 3 S11: -0.2001 S12: -1.1884 S13: -0.0048 REMARK 3 S21: 0.1535 S22: 0.1589 S23: -0.1756 REMARK 3 S31: 0.4825 S32: 0.7585 S33: -0.0626 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 378:385) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8504 -10.2951 -29.5249 REMARK 3 T TENSOR REMARK 3 T11: 0.2720 T22: 0.2826 REMARK 3 T33: 0.2073 T12: 0.1097 REMARK 3 T13: 0.0202 T23: -0.0669 REMARK 3 L TENSOR REMARK 3 L11: 5.9273 L22: 6.5917 REMARK 3 L33: 9.6514 L12: -0.1615 REMARK 3 L13: 1.6022 L23: -2.2808 REMARK 3 S TENSOR REMARK 3 S11: -0.3695 S12: 0.5948 S13: 0.0164 REMARK 3 S21: -0.7325 S22: -0.4846 S23: -0.0295 REMARK 3 S31: -0.3876 S32: -0.8784 S33: 0.4842 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 386:395) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8058 -14.5000 -15.3724 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.2329 REMARK 3 T33: 0.1642 T12: 0.0995 REMARK 3 T13: 0.0007 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.8423 L22: 3.7623 REMARK 3 L33: 2.0750 L12: 2.5583 REMARK 3 L13: -4.5568 L23: -5.5303 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: -0.2215 S13: -0.1746 REMARK 3 S21: 0.1086 S22: -0.2252 S23: -0.2215 REMARK 3 S31: 0.5917 S32: 0.2643 S33: 0.2148 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 396:405) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4578 -14.8082 2.2754 REMARK 3 T TENSOR REMARK 3 T11: 0.3232 T22: 0.2613 REMARK 3 T33: 0.1622 T12: -0.0615 REMARK 3 T13: 0.0228 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 9.3275 L22: 5.6120 REMARK 3 L33: 2.7675 L12: -0.8958 REMARK 3 L13: 0.8744 L23: 1.7399 REMARK 3 S TENSOR REMARK 3 S11: 0.2015 S12: -0.5978 S13: 0.0833 REMARK 3 S21: 0.4202 S22: 0.1392 S23: 0.0142 REMARK 3 S31: 0.2115 S32: -0.5198 S33: -0.2416 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 406:410) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7368 -8.4878 -8.9016 REMARK 3 T TENSOR REMARK 3 T11: 0.2361 T22: 0.1794 REMARK 3 T33: 0.2106 T12: 0.1061 REMARK 3 T13: 0.0720 T23: 0.0629 REMARK 3 L TENSOR REMARK 3 L11: 2.0030 L22: 2.0182 REMARK 3 L33: 1.9963 L12: 2.0020 REMARK 3 L13: 1.9782 L23: 1.9995 REMARK 3 S TENSOR REMARK 3 S11: 0.5541 S12: 0.3121 S13: 0.5470 REMARK 3 S21: 0.2406 S22: 0.2095 S23: 0.5920 REMARK 3 S31: -0.9896 S32: -0.7920 S33: -0.7133 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 411:420) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5326 0.8332 -19.3807 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.1478 REMARK 3 T33: 0.1534 T12: 0.0818 REMARK 3 T13: -0.0013 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 8.3861 L22: 5.0734 REMARK 3 L33: 3.2120 L12: 2.2067 REMARK 3 L13: -2.3488 L23: -0.4385 REMARK 3 S TENSOR REMARK 3 S11: 0.1382 S12: 0.0812 S13: 0.3956 REMARK 3 S21: 0.0431 S22: 0.0219 S23: 0.1735 REMARK 3 S31: -0.4179 S32: -0.0418 S33: -0.2221 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 421:429) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6386 -14.6700 -7.6161 REMARK 3 T TENSOR REMARK 3 T11: 0.4133 T22: 0.3153 REMARK 3 T33: 0.2488 T12: -0.0280 REMARK 3 T13: 0.0418 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 9.1344 L22: 9.4859 REMARK 3 L33: 7.1991 L12: 4.6859 REMARK 3 L13: -3.1416 L23: -8.1745 REMARK 3 S TENSOR REMARK 3 S11: 0.5862 S12: -0.4592 S13: -0.1646 REMARK 3 S21: 0.8728 S22: 0.0896 S23: 0.9324 REMARK 3 S31: 0.2070 S32: -0.8299 S33: -0.4312 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 327:354) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1645 15.8902 -18.6960 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.2521 REMARK 3 T33: 0.2460 T12: 0.1199 REMARK 3 T13: -0.0293 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 2.6537 L22: 7.8217 REMARK 3 L33: 2.1173 L12: 3.4572 REMARK 3 L13: 0.5128 L23: 2.3815 REMARK 3 S TENSOR REMARK 3 S11: -0.1323 S12: 0.0984 S13: 0.3016 REMARK 3 S21: -0.2492 S22: 0.2213 S23: 0.2039 REMARK 3 S31: -0.3414 S32: 0.1755 S33: 0.0376 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 355:430) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8807 12.8937 -14.5401 REMARK 3 T TENSOR REMARK 3 T11: 0.3016 T22: 0.2943 REMARK 3 T33: 0.2167 T12: 0.1322 REMARK 3 T13: -0.0292 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 4.3885 L22: 4.4236 REMARK 3 L33: 0.7617 L12: 0.6231 REMARK 3 L13: -1.1062 L23: -0.4327 REMARK 3 S TENSOR REMARK 3 S11: 0.1242 S12: -0.4379 S13: 0.3489 REMARK 3 S21: 0.6234 S22: 0.0580 S23: -0.2796 REMARK 3 S31: -0.1343 S32: 0.1663 S33: -0.1486 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084429. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.16962 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18855 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER, SHELX, MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M AMMONIUM SULFATE, 0.1 M TRIS PH REMARK 280 8.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.90600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.06550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.90600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.06550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1032 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1052 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 323 REMARK 465 PRO A 324 REMARK 465 GLY A 325 REMARK 465 SER A 326 REMARK 465 PRO A 430 REMARK 465 GLY B 323 REMARK 465 PRO B 324 REMARK 465 GLY B 325 REMARK 465 SER B 326 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1054 O HOH B 1056 1.83 REMARK 500 O HOH A 1070 O HOH A 1076 1.90 REMARK 500 O HOH B 1041 O HOH B 1062 1.94 REMARK 500 O HOH B 1028 O HOH B 1052 1.96 REMARK 500 O HOH A 1048 O HOH B 1039 1.99 REMARK 500 O HOH B 1036 O HOH B 1049 1.99 REMARK 500 O HOH A 1011 O HOH A 1067 2.05 REMARK 500 OG SER A 347 O HOH A 1024 2.06 REMARK 500 O HOH A 1049 O HOH A 1063 2.08 REMARK 500 O7 NAG A 901 O HOH A 1069 2.09 REMARK 500 O HOH A 1059 O HOH A 1070 2.16 REMARK 500 ND2 ASN B 391 O5 NAG B 901 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 333 -167.91 -169.26 REMARK 500 SER B 333 -167.72 -169.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OF0 RELATED DB: PDB REMARK 900 RELATED ID: 4OF3 RELATED DB: PDB REMARK 900 RELATED ID: 4OF6 RELATED DB: PDB REMARK 900 RELATED ID: 4OF7 RELATED DB: PDB REMARK 900 RELATED ID: 4OF8 RELATED DB: PDB REMARK 900 RELATED ID: 4OFD RELATED DB: PDB REMARK 900 RELATED ID: 4OFI RELATED DB: PDB REMARK 900 RELATED ID: 4OFP RELATED DB: PDB REMARK 900 RELATED ID: 4OFY RELATED DB: PDB DBREF 4OFK A 327 430 UNP Q9U3P2 Q9U3P2_CAEEL 327 430 DBREF 4OFK B 327 430 UNP Q9U3P2 Q9U3P2_CAEEL 327 430 SEQADV 4OFK GLY A 323 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK PRO A 324 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK GLY A 325 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK SER A 326 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK GLY B 323 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK PRO B 324 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK GLY B 325 UNP Q9U3P2 EXPRESSION TAG SEQADV 4OFK SER B 326 UNP Q9U3P2 EXPRESSION TAG SEQRES 1 A 108 GLY PRO GLY SER VAL ASN TYR PRO PRO ALA SER VAL GLU SEQRES 2 A 108 LEU PHE GLY GLU SER ASN ILE ARG TYR GLY SER SER ALA SEQRES 3 A 108 ASN ILE GLN CYS LYS SER LEU PRO SER ASN PRO ALA SER SEQRES 4 A 108 GLN ILE THR TRP ILE ILE ASN GLY ARG SER VAL PRO THR SEQRES 5 A 108 PRO THR GLN ARG GLU PHE VAL VAL GLU ASN GLY ILE VAL SEQRES 6 A 108 SER SER SER ASN VAL SER VAL HIS SER ASN GLU LEU SER SEQRES 7 A 108 VAL GLU ALA HIS GLN ILE ASN VAL GLU CYS MET ALA THR SEQRES 8 A 108 ASN PRO GLU GLY SER SER ALA LYS GLN HIS VAL ILE LYS SEQRES 9 A 108 ILE ILE ALA PRO SEQRES 1 B 108 GLY PRO GLY SER VAL ASN TYR PRO PRO ALA SER VAL GLU SEQRES 2 B 108 LEU PHE GLY GLU SER ASN ILE ARG TYR GLY SER SER ALA SEQRES 3 B 108 ASN ILE GLN CYS LYS SER LEU PRO SER ASN PRO ALA SER SEQRES 4 B 108 GLN ILE THR TRP ILE ILE ASN GLY ARG SER VAL PRO THR SEQRES 5 B 108 PRO THR GLN ARG GLU PHE VAL VAL GLU ASN GLY ILE VAL SEQRES 6 B 108 SER SER SER ASN VAL SER VAL HIS SER ASN GLU LEU SER SEQRES 7 B 108 VAL GLU ALA HIS GLN ILE ASN VAL GLU CYS MET ALA THR SEQRES 8 B 108 ASN PRO GLU GLY SER SER ALA LYS GLN HIS VAL ILE LYS SEQRES 9 B 108 ILE ILE ALA PRO MODRES 4OFK ASN B 391 ASN GLYCOSYLATION SITE MODRES 4OFK ASN A 391 ASN GLYCOSYLATION SITE HET NAG A 901 14 HET CL A 902 1 HET EDO A 903 4 HET NAG B 901 14 HET SO4 B 902 5 HET EDO B 903 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 CL CL 1- FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 SO4 O4 S 2- FORMUL 9 HOH *143(H2 O) HELIX 1 1 ASN B 397 LEU B 399 5 3 SHEET 1 A 4 VAL A 334 GLY A 338 0 SHEET 2 A 4 SER A 347 SER A 354 -1 O LYS A 353 N GLU A 335 SHEET 3 A 4 ILE A 386 HIS A 395 -1 O SER A 388 N SER A 354 SHEET 4 A 4 ARG A 378 VAL A 381 -1 N ARG A 378 O SER A 389 SHEET 1 B 4 ASN A 341 ARG A 343 0 SHEET 2 B 4 GLY A 417 ILE A 428 1 O LYS A 426 N ILE A 342 SHEET 3 B 4 GLY B 417 ILE B 428 -1 O ALA B 420 N SER A 418 SHEET 4 B 4 ASN B 341 ARG B 343 1 N ILE B 342 O ILE B 428 SHEET 1 C 8 ARG A 370 VAL A 372 0 SHEET 2 C 8 GLN A 362 ILE A 367 -1 N ILE A 367 O ARG A 370 SHEET 3 C 8 GLN A 405 ASN A 414 -1 O THR A 413 N GLN A 362 SHEET 4 C 8 GLY A 417 ILE A 428 -1 O HIS A 423 N VAL A 408 SHEET 5 C 8 GLY B 417 ILE B 428 -1 O ALA B 420 N SER A 418 SHEET 6 C 8 GLN B 405 ASN B 414 -1 N VAL B 408 O HIS B 423 SHEET 7 C 8 GLN B 362 ILE B 367 -1 N ILE B 366 O GLU B 409 SHEET 8 C 8 ARG B 370 SER B 371 -1 O ARG B 370 N ILE B 367 SHEET 1 D 4 VAL B 334 PHE B 337 0 SHEET 2 D 4 SER B 347 SER B 354 -1 O GLN B 351 N PHE B 337 SHEET 3 D 4 GLY B 385 HIS B 395 -1 O VAL B 394 N ALA B 348 SHEET 4 D 4 ARG B 378 VAL B 382 -1 N PHE B 380 O VAL B 387 SSBOND 1 CYS A 352 CYS A 410 1555 1555 2.02 SSBOND 2 CYS B 352 CYS B 410 1555 1555 2.02 LINK ND2 ASN A 391 C1 NAG A 901 1555 1555 1.45 LINK ND2 ASN B 391 C1 NAG B 901 1555 1555 1.43 CISPEP 1 ASN A 358 PRO A 359 0 0.46 CISPEP 2 ASN B 358 PRO B 359 0 0.72 CRYST1 61.812 54.131 63.623 90.00 104.61 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016178 0.000000 0.004217 0.00000 SCALE2 0.000000 0.018474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016243 0.00000