data_4OI3 # _entry.id 4OI3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4OI3 RCSB RCSB084520 WWPDB D_1000084520 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4OI6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OI3 _pdbx_database_status.recvd_initial_deposition_date 2014-01-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, M.' 1 'Jiang, Y.L.' 2 'Wang, S.' 3 'Cheng, W.' 4 'Zhang, R.G.' 5 'Virolle, M.J.' 6 'Chen, Y.' 7 'Zhou, C.Z.' 8 # _citation.id primary _citation.title 'Streptomyces coelicolor SCO4226 Is a Nickel Binding Protein.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first e109660 _citation.page_last e109660 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25285530 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0109660 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lu, M.' 1 primary 'Jiang, Y.L.' 2 primary 'Wang, S.' 3 primary 'Jin, H.' 4 primary 'Zhang, R.G.' 5 primary 'Virolle, M.J.' 6 primary 'Chen, Y.' 7 primary 'Zhou, C.Z.' 8 # _cell.entry_id 4OI3 _cell.length_a 29.574 _cell.length_b 66.982 _cell.length_c 34.265 _cell.angle_alpha 90.00 _cell.angle_beta 95.02 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OI3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nickel responsive protein' 10211.600 2 ? ? ? ? 2 water nat water 18.015 158 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHH(MSE)AHF(MSE)DVHRG(MSE)HGITSDQLHQAHQADLAVEKDENVHFEQAWADPASGTIYCLSEGPS AEAVQRVHERAGHKADEIHEVPLSA ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHMAHFMDVHRGMHGITSDQLHQAHQADLAVEKDENVHFEQAWADPASGTIYCLSEGPSAEAVQRVHERAGHKAD EIHEVPLSA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 MSE n 1 9 ALA n 1 10 HIS n 1 11 PHE n 1 12 MSE n 1 13 ASP n 1 14 VAL n 1 15 HIS n 1 16 ARG n 1 17 GLY n 1 18 MSE n 1 19 HIS n 1 20 GLY n 1 21 ILE n 1 22 THR n 1 23 SER n 1 24 ASP n 1 25 GLN n 1 26 LEU n 1 27 HIS n 1 28 GLN n 1 29 ALA n 1 30 HIS n 1 31 GLN n 1 32 ALA n 1 33 ASP n 1 34 LEU n 1 35 ALA n 1 36 VAL n 1 37 GLU n 1 38 LYS n 1 39 ASP n 1 40 GLU n 1 41 ASN n 1 42 VAL n 1 43 HIS n 1 44 PHE n 1 45 GLU n 1 46 GLN n 1 47 ALA n 1 48 TRP n 1 49 ALA n 1 50 ASP n 1 51 PRO n 1 52 ALA n 1 53 SER n 1 54 GLY n 1 55 THR n 1 56 ILE n 1 57 TYR n 1 58 CYS n 1 59 LEU n 1 60 SER n 1 61 GLU n 1 62 GLY n 1 63 PRO n 1 64 SER n 1 65 ALA n 1 66 GLU n 1 67 ALA n 1 68 VAL n 1 69 GLN n 1 70 ARG n 1 71 VAL n 1 72 HIS n 1 73 GLU n 1 74 ARG n 1 75 ALA n 1 76 GLY n 1 77 HIS n 1 78 LYS n 1 79 ALA n 1 80 ASP n 1 81 GLU n 1 82 ILE n 1 83 HIS n 1 84 GLU n 1 85 VAL n 1 86 PRO n 1 87 LEU n 1 88 SER n 1 89 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SCO4226 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'A3(2)' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces coelicolor' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 100226 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9FCE4_STRCO _struct_ref.pdbx_db_accession Q9FCE4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAHFMDVHRGMHGITSDQLHQAHQADLAVEKDENVHFEQAWADPASGTIYCLSEGPSAEAVQRVHERAGHKADEIHEVPL SA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OI3 A 8 ? 89 ? Q9FCE4 1 ? 82 ? 1 82 2 1 4OI3 B 8 ? 89 ? Q9FCE4 1 ? 82 ? 1 82 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OI3 MSE A 1 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -6 1 1 4OI3 HIS A 2 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -5 2 1 4OI3 HIS A 3 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -4 3 1 4OI3 HIS A 4 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -3 4 1 4OI3 HIS A 5 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -2 5 1 4OI3 HIS A 6 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -1 6 1 4OI3 HIS A 7 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' 0 7 2 4OI3 MSE B 1 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -6 8 2 4OI3 HIS B 2 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -5 9 2 4OI3 HIS B 3 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -4 10 2 4OI3 HIS B 4 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -3 11 2 4OI3 HIS B 5 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -2 12 2 4OI3 HIS B 6 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' -1 13 2 4OI3 HIS B 7 ? UNP Q9FCE4 ? ? 'EXPRESSION TAG' 0 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OI3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.66 _exptl_crystal.density_percent_sol 25.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '1.6 M sodium citrate dehydrate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details ? _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-11-13 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(III)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.3 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI ? _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4OI3 _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 93.9 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 32680 _reflns.d_resolution_low 34.14 _reflns.pdbx_redundancy ? _reflns.number_obs 30687 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.3 _reflns_shell.d_res_low 1.32 _reflns_shell.percent_possible_all 66.6 _reflns_shell.Rmerge_I_obs 0.317 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.1 _refine.overall_SU_B 1.497 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4OI3 _refine.aniso_B[2][3] 0.00 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.029 _refine.aniso_B[1][3] -0.32 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.aniso_B[3][3] 0.30 _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] 0.23 _refine.pdbx_overall_ESU_R 0.061 _refine.ls_R_factor_obs 0.15327 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.ls_number_reflns_R_free 1550 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.pdbx_ls_sigma_F . _refine.ls_percent_reflns_obs 93.84 _refine.ls_R_factor_R_work 0.15237 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.30 _refine.pdbx_overall_ESU_R_Free 0.051 _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 9.945 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.15237 _refine.aniso_B[2][2] -0.58 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 34.14 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details MASK _refine.aniso_B[1][2] 0.00 _refine.ls_R_factor_R_free 0.16926 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 29092 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_number_reflns_all 31002 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1256 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 1414 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 34.14 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.021 ? 1314 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.073 1.891 ? 1790 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 4.872 5.000 ? 168 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.540 24.595 ? 74 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.000 15.000 ? 198 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.037 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.078 0.200 ? 186 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 1062 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined 0.200 0.200 ? 556 ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.290 0.200 ? 871 ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.112 0.200 ? 120 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.155 0.200 ? 40 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.190 0.200 ? 14 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.929 1.500 ? 842 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.117 2.000 ? 1304 ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it 1.615 3.000 ? 520 ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it 2.206 4.500 ? 482 ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 0.982 3.000 ? 1362 ? 'X-RAY DIFFRACTION' r_sphericity_free 2.806 3.000 ? 158 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 2.008 3.000 ? 1276 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.301 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.number_reflns_R_work 1614 _refine_ls_shell.R_factor_R_work 0.192 _refine_ls_shell.percent_reflns_obs 70.12 _refine_ls_shell.R_factor_R_free 0.211 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4OI3 _struct.title 'Crystal structure analysis of SCO4226 from Streptomyces coelicolor A3(2)' _struct.pdbx_descriptor 'Nickel responsive protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text ;nickel responsive protein, Structural Genomics, ferredoxin-like fold, a nickel responsive protein, nickel binding, METAL BINDING PROTEIN ; _struct_keywords.entry_id 4OI3 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? LYS A 38 ? THR A 15 LYS A 31 1 ? 17 HELX_P HELX_P2 2 ASP A 39 ? ASN A 41 ? ASP A 32 ASN A 34 5 ? 3 HELX_P HELX_P3 3 SER A 64 ? GLY A 76 ? SER A 57 GLY A 69 1 ? 13 HELX_P HELX_P4 4 THR B 22 ? GLU B 37 ? THR B 15 GLU B 30 1 ? 16 HELX_P HELX_P5 5 LYS B 38 ? ASN B 41 ? LYS B 31 ASN B 34 5 ? 4 HELX_P HELX_P6 6 SER B 64 ? GLY B 76 ? SER B 57 GLY B 69 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PHE 11 C ? ? ? 1_555 A MSE 12 N ? ? A PHE 4 A MSE 5 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 12 C ? ? ? 1_555 A ASP 13 N ? ? A MSE 5 A ASP 6 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? A GLY 17 C ? ? ? 1_555 A MSE 18 N ? ? A GLY 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 18 C ? ? ? 1_555 A HIS 19 N ? ? A MSE 11 A HIS 12 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? B PHE 11 C ? ? ? 1_555 B MSE 12 N ? ? B PHE 4 B MSE 5 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? B MSE 12 C ? ? ? 1_555 B ASP 13 N ? ? B MSE 5 B ASP 6 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? B GLY 17 C ? ? ? 1_555 B MSE 18 N ? ? B GLY 10 B MSE 11 1_555 ? ? ? ? ? ? ? 1.332 ? covale8 covale ? ? B MSE 18 C ? ? ? 1_555 B HIS 19 N ? ? B MSE 11 B HIS 12 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 81 ? GLU A 84 ? GLU A 74 GLU A 77 A 2 HIS A 10 ? HIS A 15 ? HIS A 3 HIS A 8 A 3 THR A 55 ? GLU A 61 ? THR A 48 GLU A 54 A 4 HIS A 43 ? ASP A 50 ? HIS A 36 ASP A 43 A 5 LEU B 87 ? ALA B 89 ? LEU B 80 ALA B 82 B 1 LEU A 87 ? ALA A 89 ? LEU A 80 ALA A 82 B 2 HIS B 43 ? ASP B 50 ? HIS B 36 ASP B 43 B 3 THR B 55 ? GLU B 61 ? THR B 48 GLU B 54 B 4 HIS B 10 ? HIS B 15 ? HIS B 3 HIS B 8 B 5 GLU B 81 ? GLU B 84 ? GLU B 74 GLU B 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 83 ? O HIS A 76 N MSE A 12 ? N MSE A 5 A 2 3 N HIS A 15 ? N HIS A 8 O ILE A 56 ? O ILE A 49 A 3 4 O THR A 55 ? O THR A 48 N ASP A 50 ? N ASP A 43 A 4 5 N ALA A 49 ? N ALA A 42 O LEU B 87 ? O LEU B 80 B 1 2 N LEU A 87 ? N LEU A 80 O ALA B 49 ? O ALA B 42 B 2 3 N ASP B 50 ? N ASP B 43 O THR B 55 ? O THR B 48 B 3 4 O SER B 60 ? O SER B 53 N PHE B 11 ? N PHE B 4 B 4 5 N MSE B 12 ? N MSE B 5 O HIS B 83 ? O HIS B 76 # _database_PDB_matrix.entry_id 4OI3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OI3 _atom_sites.fract_transf_matrix[1][1] 0.033813 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002968 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014929 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029296 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -6 ? ? ? A . n A 1 2 HIS 2 -5 ? ? ? A . n A 1 3 HIS 3 -4 ? ? ? A . n A 1 4 HIS 4 -3 ? ? ? A . n A 1 5 HIS 5 -2 ? ? ? A . n A 1 6 HIS 6 -1 ? ? ? A . n A 1 7 HIS 7 0 ? ? ? A . n A 1 8 MSE 8 1 ? ? ? A . n A 1 9 ALA 9 2 2 ALA ALA A . n A 1 10 HIS 10 3 3 HIS HIS A . n A 1 11 PHE 11 4 4 PHE PHE A . n A 1 12 MSE 12 5 5 MSE MSE A . n A 1 13 ASP 13 6 6 ASP ASP A . n A 1 14 VAL 14 7 7 VAL VAL A . n A 1 15 HIS 15 8 8 HIS HIS A . n A 1 16 ARG 16 9 9 ARG ARG A . n A 1 17 GLY 17 10 10 GLY GLY A . n A 1 18 MSE 18 11 11 MSE MSE A . n A 1 19 HIS 19 12 12 HIS HIS A . n A 1 20 GLY 20 13 13 GLY GLY A . n A 1 21 ILE 21 14 14 ILE ILE A . n A 1 22 THR 22 15 15 THR THR A . n A 1 23 SER 23 16 16 SER SER A . n A 1 24 ASP 24 17 17 ASP ASP A . n A 1 25 GLN 25 18 18 GLN GLN A . n A 1 26 LEU 26 19 19 LEU LEU A . n A 1 27 HIS 27 20 20 HIS HIS A . n A 1 28 GLN 28 21 21 GLN GLN A . n A 1 29 ALA 29 22 22 ALA ALA A . n A 1 30 HIS 30 23 23 HIS HIS A . n A 1 31 GLN 31 24 24 GLN GLN A . n A 1 32 ALA 32 25 25 ALA ALA A . n A 1 33 ASP 33 26 26 ASP ASP A . n A 1 34 LEU 34 27 27 LEU LEU A . n A 1 35 ALA 35 28 28 ALA ALA A . n A 1 36 VAL 36 29 29 VAL VAL A . n A 1 37 GLU 37 30 30 GLU GLU A . n A 1 38 LYS 38 31 31 LYS LYS A . n A 1 39 ASP 39 32 32 ASP ASP A . n A 1 40 GLU 40 33 33 GLU GLU A . n A 1 41 ASN 41 34 34 ASN ASN A . n A 1 42 VAL 42 35 35 VAL VAL A . n A 1 43 HIS 43 36 36 HIS HIS A . n A 1 44 PHE 44 37 37 PHE PHE A . n A 1 45 GLU 45 38 38 GLU GLU A . n A 1 46 GLN 46 39 39 GLN GLN A . n A 1 47 ALA 47 40 40 ALA ALA A . n A 1 48 TRP 48 41 41 TRP TRP A . n A 1 49 ALA 49 42 42 ALA ALA A . n A 1 50 ASP 50 43 43 ASP ASP A . n A 1 51 PRO 51 44 44 PRO PRO A . n A 1 52 ALA 52 45 45 ALA ALA A . n A 1 53 SER 53 46 46 SER SER A . n A 1 54 GLY 54 47 47 GLY GLY A . n A 1 55 THR 55 48 48 THR THR A . n A 1 56 ILE 56 49 49 ILE ILE A . n A 1 57 TYR 57 50 50 TYR TYR A . n A 1 58 CYS 58 51 51 CYS CYS A . n A 1 59 LEU 59 52 52 LEU LEU A . n A 1 60 SER 60 53 53 SER SER A . n A 1 61 GLU 61 54 54 GLU GLU A . n A 1 62 GLY 62 55 55 GLY GLY A . n A 1 63 PRO 63 56 56 PRO PRO A . n A 1 64 SER 64 57 57 SER SER A . n A 1 65 ALA 65 58 58 ALA ALA A . n A 1 66 GLU 66 59 59 GLU GLU A . n A 1 67 ALA 67 60 60 ALA ALA A . n A 1 68 VAL 68 61 61 VAL VAL A . n A 1 69 GLN 69 62 62 GLN GLN A . n A 1 70 ARG 70 63 63 ARG ARG A . n A 1 71 VAL 71 64 64 VAL VAL A . n A 1 72 HIS 72 65 65 HIS HIS A . n A 1 73 GLU 73 66 66 GLU GLU A . n A 1 74 ARG 74 67 67 ARG ARG A . n A 1 75 ALA 75 68 68 ALA ALA A . n A 1 76 GLY 76 69 69 GLY GLY A . n A 1 77 HIS 77 70 70 HIS HIS A . n A 1 78 LYS 78 71 71 LYS LYS A . n A 1 79 ALA 79 72 72 ALA ALA A . n A 1 80 ASP 80 73 73 ASP ASP A . n A 1 81 GLU 81 74 74 GLU GLU A . n A 1 82 ILE 82 75 75 ILE ILE A . n A 1 83 HIS 83 76 76 HIS HIS A . n A 1 84 GLU 84 77 77 GLU GLU A . n A 1 85 VAL 85 78 78 VAL VAL A . n A 1 86 PRO 86 79 79 PRO PRO A . n A 1 87 LEU 87 80 80 LEU LEU A . n A 1 88 SER 88 81 81 SER SER A . n A 1 89 ALA 89 82 82 ALA ALA A . n B 1 1 MSE 1 -6 ? ? ? B . n B 1 2 HIS 2 -5 ? ? ? B . n B 1 3 HIS 3 -4 ? ? ? B . n B 1 4 HIS 4 -3 ? ? ? B . n B 1 5 HIS 5 -2 ? ? ? B . n B 1 6 HIS 6 -1 ? ? ? B . n B 1 7 HIS 7 0 ? ? ? B . n B 1 8 MSE 8 1 ? ? ? B . n B 1 9 ALA 9 2 2 ALA ALA B . n B 1 10 HIS 10 3 3 HIS HIS B . n B 1 11 PHE 11 4 4 PHE PHE B . n B 1 12 MSE 12 5 5 MSE MSE B . n B 1 13 ASP 13 6 6 ASP ASP B . n B 1 14 VAL 14 7 7 VAL VAL B . n B 1 15 HIS 15 8 8 HIS HIS B . n B 1 16 ARG 16 9 9 ARG ARG B . n B 1 17 GLY 17 10 10 GLY GLY B . n B 1 18 MSE 18 11 11 MSE MSE B . n B 1 19 HIS 19 12 12 HIS HIS B . n B 1 20 GLY 20 13 13 GLY GLY B . n B 1 21 ILE 21 14 14 ILE ILE B . n B 1 22 THR 22 15 15 THR THR B . n B 1 23 SER 23 16 16 SER SER B . n B 1 24 ASP 24 17 17 ASP ASP B . n B 1 25 GLN 25 18 18 GLN GLN B . n B 1 26 LEU 26 19 19 LEU LEU B . n B 1 27 HIS 27 20 20 HIS HIS B . n B 1 28 GLN 28 21 21 GLN GLN B . n B 1 29 ALA 29 22 22 ALA ALA B . n B 1 30 HIS 30 23 23 HIS HIS B . n B 1 31 GLN 31 24 24 GLN GLN B . n B 1 32 ALA 32 25 25 ALA ALA B . n B 1 33 ASP 33 26 26 ASP ASP B . n B 1 34 LEU 34 27 27 LEU LEU B . n B 1 35 ALA 35 28 28 ALA ALA B . n B 1 36 VAL 36 29 29 VAL VAL B . n B 1 37 GLU 37 30 30 GLU GLU B . n B 1 38 LYS 38 31 31 LYS LYS B . n B 1 39 ASP 39 32 32 ASP ASP B . n B 1 40 GLU 40 33 33 GLU GLU B . n B 1 41 ASN 41 34 34 ASN ASN B . n B 1 42 VAL 42 35 35 VAL VAL B . n B 1 43 HIS 43 36 36 HIS HIS B . n B 1 44 PHE 44 37 37 PHE PHE B . n B 1 45 GLU 45 38 38 GLU GLU B . n B 1 46 GLN 46 39 39 GLN GLN B . n B 1 47 ALA 47 40 40 ALA ALA B . n B 1 48 TRP 48 41 41 TRP TRP B . n B 1 49 ALA 49 42 42 ALA ALA B . n B 1 50 ASP 50 43 43 ASP ASP B . n B 1 51 PRO 51 44 44 PRO PRO B . n B 1 52 ALA 52 45 45 ALA ALA B . n B 1 53 SER 53 46 46 SER SER B . n B 1 54 GLY 54 47 47 GLY GLY B . n B 1 55 THR 55 48 48 THR THR B . n B 1 56 ILE 56 49 49 ILE ILE B . n B 1 57 TYR 57 50 50 TYR TYR B . n B 1 58 CYS 58 51 51 CYS CYS B . n B 1 59 LEU 59 52 52 LEU LEU B . n B 1 60 SER 60 53 53 SER SER B . n B 1 61 GLU 61 54 54 GLU GLU B . n B 1 62 GLY 62 55 55 GLY GLY B . n B 1 63 PRO 63 56 56 PRO PRO B . n B 1 64 SER 64 57 57 SER SER B . n B 1 65 ALA 65 58 58 ALA ALA B . n B 1 66 GLU 66 59 59 GLU GLU B . n B 1 67 ALA 67 60 60 ALA ALA B . n B 1 68 VAL 68 61 61 VAL VAL B . n B 1 69 GLN 69 62 62 GLN GLN B . n B 1 70 ARG 70 63 63 ARG ARG B . n B 1 71 VAL 71 64 64 VAL VAL B . n B 1 72 HIS 72 65 65 HIS HIS B . n B 1 73 GLU 73 66 66 GLU GLU B . n B 1 74 ARG 74 67 67 ARG ARG B . n B 1 75 ALA 75 68 68 ALA ALA B . n B 1 76 GLY 76 69 69 GLY GLY B . n B 1 77 HIS 77 70 70 HIS HIS B . n B 1 78 LYS 78 71 71 LYS LYS B . n B 1 79 ALA 79 72 72 ALA ALA B . n B 1 80 ASP 80 73 73 ASP ASP B . n B 1 81 GLU 81 74 74 GLU GLU B . n B 1 82 ILE 82 75 75 ILE ILE B . n B 1 83 HIS 83 76 76 HIS HIS B . n B 1 84 GLU 84 77 77 GLU GLU B . n B 1 85 VAL 85 78 78 VAL VAL B . n B 1 86 PRO 86 79 79 PRO PRO B . n B 1 87 LEU 87 80 80 LEU LEU B . n B 1 88 SER 88 81 81 SER SER B . n B 1 89 ALA 89 82 82 ALA ALA B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 5 ? MET SELENOMETHIONINE 2 A MSE 18 A MSE 11 ? MET SELENOMETHIONINE 3 B MSE 12 B MSE 5 ? MET SELENOMETHIONINE 4 B MSE 18 B MSE 11 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2140 ? 1 MORE -14 ? 1 'SSA (A^2)' 7780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2014-10-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 SOLVE phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 11 ? ? -95.67 36.22 2 1 HIS A 70 ? ? -151.97 73.07 3 1 MSE B 11 ? ? -89.49 40.60 4 1 HIS B 70 ? ? -151.29 73.27 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -6 ? A MSE 1 2 1 Y 1 A HIS -5 ? A HIS 2 3 1 Y 1 A HIS -4 ? A HIS 3 4 1 Y 1 A HIS -3 ? A HIS 4 5 1 Y 1 A HIS -2 ? A HIS 5 6 1 Y 1 A HIS -1 ? A HIS 6 7 1 Y 1 A HIS 0 ? A HIS 7 8 1 Y 1 A MSE 1 ? A MSE 8 9 1 Y 1 B MSE -6 ? B MSE 1 10 1 Y 1 B HIS -5 ? B HIS 2 11 1 Y 1 B HIS -4 ? B HIS 3 12 1 Y 1 B HIS -3 ? B HIS 4 13 1 Y 1 B HIS -2 ? B HIS 5 14 1 Y 1 B HIS -1 ? B HIS 6 15 1 Y 1 B HIS 0 ? B HIS 7 16 1 Y 1 B MSE 1 ? B MSE 8 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 101 1 HOH HOH A . C 2 HOH 2 102 3 HOH HOH A . C 2 HOH 3 103 5 HOH HOH A . C 2 HOH 4 104 8 HOH HOH A . C 2 HOH 5 105 10 HOH HOH A . C 2 HOH 6 106 11 HOH HOH A . C 2 HOH 7 107 12 HOH HOH A . C 2 HOH 8 108 14 HOH HOH A . C 2 HOH 9 109 17 HOH HOH A . C 2 HOH 10 110 18 HOH HOH A . C 2 HOH 11 111 20 HOH HOH A . C 2 HOH 12 112 22 HOH HOH A . C 2 HOH 13 113 28 HOH HOH A . C 2 HOH 14 114 29 HOH HOH A . C 2 HOH 15 115 30 HOH HOH A . C 2 HOH 16 116 32 HOH HOH A . C 2 HOH 17 117 33 HOH HOH A . C 2 HOH 18 118 38 HOH HOH A . C 2 HOH 19 119 42 HOH HOH A . C 2 HOH 20 120 45 HOH HOH A . C 2 HOH 21 121 46 HOH HOH A . C 2 HOH 22 122 47 HOH HOH A . C 2 HOH 23 123 48 HOH HOH A . C 2 HOH 24 124 49 HOH HOH A . C 2 HOH 25 125 50 HOH HOH A . C 2 HOH 26 126 51 HOH HOH A . C 2 HOH 27 127 52 HOH HOH A . C 2 HOH 28 128 57 HOH HOH A . C 2 HOH 29 129 60 HOH HOH A . C 2 HOH 30 130 62 HOH HOH A . C 2 HOH 31 131 63 HOH HOH A . C 2 HOH 32 132 64 HOH HOH A . C 2 HOH 33 133 67 HOH HOH A . C 2 HOH 34 134 68 HOH HOH A . C 2 HOH 35 135 69 HOH HOH A . C 2 HOH 36 136 70 HOH HOH A . C 2 HOH 37 137 75 HOH HOH A . C 2 HOH 38 138 76 HOH HOH A . C 2 HOH 39 139 78 HOH HOH A . C 2 HOH 40 140 80 HOH HOH A . C 2 HOH 41 141 81 HOH HOH A . C 2 HOH 42 142 83 HOH HOH A . C 2 HOH 43 143 86 HOH HOH A . C 2 HOH 44 144 88 HOH HOH A . C 2 HOH 45 145 89 HOH HOH A . C 2 HOH 46 146 92 HOH HOH A . C 2 HOH 47 147 94 HOH HOH A . C 2 HOH 48 148 95 HOH HOH A . C 2 HOH 49 149 99 HOH HOH A . C 2 HOH 50 150 103 HOH HOH A . C 2 HOH 51 151 107 HOH HOH A . C 2 HOH 52 152 109 HOH HOH A . C 2 HOH 53 153 110 HOH HOH A . C 2 HOH 54 154 111 HOH HOH A . C 2 HOH 55 155 112 HOH HOH A . C 2 HOH 56 156 113 HOH HOH A . C 2 HOH 57 157 114 HOH HOH A . C 2 HOH 58 158 115 HOH HOH A . C 2 HOH 59 159 116 HOH HOH A . C 2 HOH 60 160 117 HOH HOH A . C 2 HOH 61 161 120 HOH HOH A . C 2 HOH 62 162 123 HOH HOH A . C 2 HOH 63 163 124 HOH HOH A . C 2 HOH 64 164 125 HOH HOH A . C 2 HOH 65 165 126 HOH HOH A . C 2 HOH 66 166 127 HOH HOH A . C 2 HOH 67 167 128 HOH HOH A . C 2 HOH 68 168 129 HOH HOH A . C 2 HOH 69 169 130 HOH HOH A . C 2 HOH 70 170 131 HOH HOH A . C 2 HOH 71 171 134 HOH HOH A . C 2 HOH 72 172 135 HOH HOH A . C 2 HOH 73 173 136 HOH HOH A . C 2 HOH 74 174 139 HOH HOH A . C 2 HOH 75 175 140 HOH HOH A . C 2 HOH 76 176 141 HOH HOH A . C 2 HOH 77 177 142 HOH HOH A . C 2 HOH 78 178 145 HOH HOH A . C 2 HOH 79 179 148 HOH HOH A . C 2 HOH 80 180 149 HOH HOH A . C 2 HOH 81 181 150 HOH HOH A . C 2 HOH 82 182 151 HOH HOH A . C 2 HOH 83 183 152 HOH HOH A . C 2 HOH 84 184 155 HOH HOH A . C 2 HOH 85 185 156 HOH HOH A . D 2 HOH 1 101 2 HOH HOH B . D 2 HOH 2 102 4 HOH HOH B . D 2 HOH 3 103 6 HOH HOH B . D 2 HOH 4 104 7 HOH HOH B . D 2 HOH 5 105 9 HOH HOH B . D 2 HOH 6 106 13 HOH HOH B . D 2 HOH 7 107 15 HOH HOH B . D 2 HOH 8 108 16 HOH HOH B . D 2 HOH 9 109 19 HOH HOH B . D 2 HOH 10 110 21 HOH HOH B . D 2 HOH 11 111 23 HOH HOH B . D 2 HOH 12 112 24 HOH HOH B . D 2 HOH 13 113 25 HOH HOH B . D 2 HOH 14 114 26 HOH HOH B . D 2 HOH 15 115 27 HOH HOH B . D 2 HOH 16 116 31 HOH HOH B . D 2 HOH 17 117 34 HOH HOH B . D 2 HOH 18 118 35 HOH HOH B . D 2 HOH 19 119 36 HOH HOH B . D 2 HOH 20 120 37 HOH HOH B . D 2 HOH 21 121 39 HOH HOH B . D 2 HOH 22 122 40 HOH HOH B . D 2 HOH 23 123 41 HOH HOH B . D 2 HOH 24 124 43 HOH HOH B . D 2 HOH 25 125 44 HOH HOH B . D 2 HOH 26 126 53 HOH HOH B . D 2 HOH 27 127 54 HOH HOH B . D 2 HOH 28 128 55 HOH HOH B . D 2 HOH 29 129 56 HOH HOH B . D 2 HOH 30 130 58 HOH HOH B . D 2 HOH 31 131 59 HOH HOH B . D 2 HOH 32 132 61 HOH HOH B . D 2 HOH 33 133 65 HOH HOH B . D 2 HOH 34 134 66 HOH HOH B . D 2 HOH 35 135 71 HOH HOH B . D 2 HOH 36 136 72 HOH HOH B . D 2 HOH 37 137 73 HOH HOH B . D 2 HOH 38 138 74 HOH HOH B . D 2 HOH 39 139 77 HOH HOH B . D 2 HOH 40 140 79 HOH HOH B . D 2 HOH 41 141 82 HOH HOH B . D 2 HOH 42 142 84 HOH HOH B . D 2 HOH 43 143 85 HOH HOH B . D 2 HOH 44 144 87 HOH HOH B . D 2 HOH 45 145 90 HOH HOH B . D 2 HOH 46 146 91 HOH HOH B . D 2 HOH 47 147 93 HOH HOH B . D 2 HOH 48 148 96 HOH HOH B . D 2 HOH 49 149 97 HOH HOH B . D 2 HOH 50 150 98 HOH HOH B . D 2 HOH 51 151 100 HOH HOH B . D 2 HOH 52 152 101 HOH HOH B . D 2 HOH 53 153 102 HOH HOH B . D 2 HOH 54 154 104 HOH HOH B . D 2 HOH 55 155 105 HOH HOH B . D 2 HOH 56 156 106 HOH HOH B . D 2 HOH 57 157 108 HOH HOH B . D 2 HOH 58 158 118 HOH HOH B . D 2 HOH 59 159 119 HOH HOH B . D 2 HOH 60 160 121 HOH HOH B . D 2 HOH 61 161 122 HOH HOH B . D 2 HOH 62 162 132 HOH HOH B . D 2 HOH 63 163 133 HOH HOH B . D 2 HOH 64 164 137 HOH HOH B . D 2 HOH 65 165 138 HOH HOH B . D 2 HOH 66 166 143 HOH HOH B . D 2 HOH 67 167 144 HOH HOH B . D 2 HOH 68 168 146 HOH HOH B . D 2 HOH 69 169 147 HOH HOH B . D 2 HOH 70 170 153 HOH HOH B . D 2 HOH 71 171 154 HOH HOH B . D 2 HOH 72 172 157 HOH HOH B . D 2 HOH 73 173 158 HOH HOH B . #