HEADER TRANSFERASE(PHOSPHOTRANSFERASE) 25-JAN-88 4PFK TITLE PHOSPHOFRUCTOKINASE. STRUCTURE AND CONTROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOFRUCTOKINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 CELL_LINE: 293; SOURCE 5 EXPRESSION_SYSTEM_STRAIN: 293 KEYWDS TRANSFERASE(PHOSPHOTRANSFERASE) EXPDTA X-RAY DIFFRACTION AUTHOR P.R.EVANS,P.J.HUDSON REVDAT 9 28-FEB-24 4PFK 1 HETSYN REVDAT 8 29-JUL-20 4PFK 1 COMPND REMARK SEQADV HETNAM REVDAT 8 2 1 LINK SITE REVDAT 7 16-NOV-11 4PFK 1 HETATM REVDAT 6 13-JUL-11 4PFK 1 VERSN REVDAT 5 24-FEB-09 4PFK 1 VERSN REVDAT 4 01-APR-03 4PFK 1 JRNL REVDAT 3 15-JUL-90 4PFK 1 REMARK REVDAT 2 19-APR-89 4PFK 1 REMARK REVDAT 1 09-JAN-89 4PFK 0 JRNL AUTH P.R.EVANS,G.W.FARRANTS,P.J.HUDSON JRNL TITL PHOSPHOFRUCTOKINASE: STRUCTURE AND CONTROL. JRNL REF PHILOS.TRANS.R.SOC.LONDON, V. 293 53 1981 JRNL REF 2 SER.B JRNL REFN ISSN 0080-4622 JRNL PMID 6115424 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.R.RYPNIEWSKI,P.R.EVANS REMARK 1 TITL CRYSTAL STRUCTURE OF UNLIGANDED PHOSPHOFRUCTOKINASE FROM REMARK 1 TITL 2 ESCHERICHIA COLI REMARK 1 REF J.MOL.BIOL. V. 207 805 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.SHIRAKIHARA,P.R.EVANS REMARK 1 TITL CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM REMARK 1 TITL 2 ESCHERICHIA COLI WITH ITS REACTION PRODUCTS REMARK 1 REF J.MOL.BIOL. V. 204 973 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.R.EVANS,G.W.FARRANTS,M.C.LAWRENCE REMARK 1 TITL CRYSTALLOGRAPHIC STRUCTURE OF ALLOSTERICALLY INHIBITED REMARK 1 TITL 2 PHOSPHOFRUCTOKINASE AT 7 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 191 713 1986 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.W.HELLINGA,P.R.EVANS REMARK 1 TITL NUCLEOTIDE SEQUENCE AND HIGH-LEVEL EXPRESSION OF THE MAJOR REMARK 1 TITL 2 ESCHERICHIA COLI PHOSPHOFRUCTOKINASE REMARK 1 REF EUR.J.BIOCHEM. V. 149 363 1985 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 5 REMARK 1 AUTH P.R.EVANS,P.J.HUDSON REMARK 1 TITL STRUCTURE AND CONTROL OF PHOSPHOFRUCTOKINASE FROM BACILLUS REMARK 1 TITL 2 STEAROTHERMOPHILUS REMARK 1 REF NATURE V. 279 500 1979 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 6 REMARK 1 AUTH P.R.EVANS,P.J.HUDSON REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF PHOSPHOFRUCTOKINASE FROM REMARK 1 TITL 2 BACILLUS STEAROTHERMOPHILUS REMARK 1 REF PROC.FEBS MEET. V. 52 349 1978 REMARK 1 REFN ISSN 0071-4402 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2392 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 70 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.011 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.041 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179391. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE CRYSTALS USED IN THIS STUDY WERE REMARK 280 GROWN FROM POTASSIUM PHOSPHATE WITH 2 MILLIMOLAR FRUCTOSE-6- REMARK 280 PHOSPHATE. FOR THIS LIGANDED STRUCTURE, THE CRYSTALS WERE SOAKED REMARK 280 IN FRUCTOSE-6-PHOSPHATE (F6P) AND ADP/MG IN POTASSIUM TARTRATE. REMARK 280 F6P 323 AND THE EFFECTOR SITE ADP 326 ARE TREATED AS FULLY REMARK 280 OCCUPIED WHILE ADP 324 IS TREATED AS HALF OCCUPIED. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.05000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.75000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.05000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.75000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 61.25000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.05000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 30.75000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 61.25000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.05000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 30.75000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 23530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -193.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 360 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 380 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CE NZ REMARK 470 LYS A 50 CD CE NZ REMARK 470 LYS A 110 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 3 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 3 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 LEU A 7 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ASP A 12 CB - CG - OD1 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP A 12 CB - CG - OD2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ARG A 21 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 59 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 GLU A 75 CA - CB - CG ANGL. DEV. = 30.3 DEGREES REMARK 500 TYR A 106 CB - CG - CD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 TYR A 106 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES REMARK 500 CYS A 119 CB - CA - C ANGL. DEV. = -12.5 DEGREES REMARK 500 ASP A 148 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 155 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 162 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 171 CG - CD - NE ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG A 207 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 211 CG - CD - NE ANGL. DEV. = 16.3 DEGREES REMARK 500 GLY A 212 N - CA - C ANGL. DEV. = 15.0 DEGREES REMARK 500 GLU A 241 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 ARG A 243 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 252 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 270 CG - CD - NE ANGL. DEV. = 14.1 DEGREES REMARK 500 GLU A 277 CA - CB - CG ANGL. DEV. = 19.8 DEGREES REMARK 500 ARG A 282 CD - NE - CZ ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 282 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASN A 288 CB - CG - OD1 ANGL. DEV. = -12.0 DEGREES REMARK 500 ARG A 310 CD - NE - CZ ANGL. DEV. = 11.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 69 175.11 69.48 REMARK 500 ASP A 129 64.65 -101.09 REMARK 500 LYS A 214 -70.46 -72.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 327 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 185 O REMARK 620 2 GLU A 187 OE1 97.8 REMARK 620 3 ADP A 326 O2B 96.0 161.2 REMARK 620 4 ADP A 326 O2A 169.9 73.5 93.6 REMARK 620 5 HOH A 386 O 82.1 82.1 87.3 101.4 REMARK 620 6 HOH A 387 O 91.6 87.5 104.8 83.0 166.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 325 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 324 O2A REMARK 620 2 ADP A 324 O2B 68.2 REMARK 620 3 ADP A 324 O1A 50.3 86.9 REMARK 620 4 ADP A 324 O1B 86.9 54.3 59.7 REMARK 620 N 1 2 3 DBREF 4PFK A 1 320 UNP P00512 K6PF_BACST 1 319 SEQADV 4PFK GLN A 95 UNP P00512 GLU 95 CONFLICT SEQRES 1 A 319 MET LYS ARG ILE GLY VAL LEU THR SER GLY GLY ASP SER SEQRES 2 A 319 PRO GLY MET ASN ALA ALA ILE ARG SER VAL VAL ARG LYS SEQRES 3 A 319 ALA ILE TYR HIS GLY VAL GLU VAL TYR GLY VAL TYR HIS SEQRES 4 A 319 GLY TYR ALA GLY LEU ILE ALA GLY ASN ILE LYS LYS LEU SEQRES 5 A 319 GLU VAL GLY ASP VAL GLY ASP ILE ILE HIS ARG GLY GLY SEQRES 6 A 319 THR ILE LEU TYR THR ALA ARG CYS PRO GLU PHE LYS THR SEQRES 7 A 319 GLU GLU GLY GLN LYS LYS GLY ILE GLU GLN LEU LYS LYS SEQRES 8 A 319 HIS GLY ILE GLN GLY LEU VAL VAL ILE GLY GLY ASP GLY SEQRES 9 A 319 SER TYR GLN GLY ALA LYS LYS LEU THR GLU HIS GLY PHE SEQRES 10 A 319 PRO CYS VAL GLY VAL PRO GLY THR ILE ASP ASN ASP ILE SEQRES 11 A 319 PRO GLY THR ASP PHE THR ILE GLY PHE ASP THR ALA LEU SEQRES 12 A 319 ASN THR VAL ILE ASP ALA ILE ASP LYS ILE ARG ASP THR SEQRES 13 A 319 ALA THR SER HIS GLU ARG THR TYR VAL ILE GLU VAL MET SEQRES 14 A 319 GLY ARG HIS ALA GLY ASP ILE ALA LEU TRP SER GLY LEU SEQRES 15 A 319 ALA GLY GLY ALA GLU THR ILE LEU ILE PRO GLU ALA ASP SEQRES 16 A 319 TYR ASP MET ASN ASP VAL ILE ALA ARG LEU LYS ARG GLY SEQRES 17 A 319 HIS GLU ARG GLY LYS LYS HIS SER ILE ILE ILE VAL ALA SEQRES 18 A 319 GLU GLY VAL GLY SER GLY VAL ASP PHE GLY ARG GLN ILE SEQRES 19 A 319 GLN GLU ALA THR GLY PHE GLU THR ARG VAL THR VAL LEU SEQRES 20 A 319 GLY HIS VAL GLN ARG GLY GLY SER PRO THR ALA PHE ASP SEQRES 21 A 319 ARG VAL LEU ALA SER ARG LEU GLY ALA ARG ALA VAL GLU SEQRES 22 A 319 LEU LEU LEU GLU GLY LYS GLY GLY ARG CYS VAL GLY ILE SEQRES 23 A 319 GLN ASN ASN GLN LEU VAL ASP HIS ASP ILE ALA GLU ALA SEQRES 24 A 319 LEU ALA ASN LYS HIS THR ILE ASP GLN ARG MET TYR ALA SEQRES 25 A 319 LEU SER LYS GLU LEU SER ILE HET F6P A 323 16 HET MG A 325 1 HET MG A 327 1 HET ADP A 324 27 HET ADP A 326 27 HETNAM F6P 6-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETSYN F6P FRUCTOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D-FRUCTOSE; 6- HETSYN 2 F6P O-PHOSPHONO-D-FRUCTOSE; 6-O-PHOSPHONO-FRUCTOSE FORMUL 2 F6P C6 H13 O9 P FORMUL 3 MG 2(MG 2+) FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 HOH *70(H2 O) HELIX 1 1 GLY A 15 HIS A 30 13/10 END 16 HELIX 2 2 GLY A 40 GLY A 47 13/10 END 8 HELIX 3 4A CYS A 73 THR A 78 5 6 HELIX 4 4 THR A 78 GLY A 93 13/10 END 16 HELIX 5 5 ASP A 103 GLY A 116 1 14 HELIX 6 6 GLY A 138 HIS A 160 1 23 HELIX 7 7 GLY A 174 GLY A 185 1 12 HELIX 8 8 ASP A 197 ARG A 211 13/10 BEGINNING AND END 15 HELIX 9 9 SER A 226 THR A 238 1 13 HELIX 10 10 GLY A 248 GLY A 253 5 6 HELIX 11 11 THR A 257 GLU A 277 13/10 END 21 HELIX 12 12 ASP A 295 ASN A 303 1 8 HELIX 13 13 ASP A 308 SER A 319 1 12 SHEET 1 S1 7 ASN A 48 LEU A 52 0 SHEET 2 S1 7 GLU A 33 TYR A 38 -1 O GLY A 36 N LYS A 50 SHEET 3 S1 7 LYS A 2 SER A 9 1 O VAL A 6 N VAL A 37 SHEET 4 S1 7 GLY A 96 GLY A 101 1 O VAL A 98 N LEU A 7 SHEET 5 S1 7 PRO A 118 VAL A 122 1 O VAL A 120 N VAL A 99 SHEET 6 S1 7 ARG A 282 GLN A 287 1 O ARG A 282 N GLY A 121 SHEET 7 S1 7 GLN A 290 HIS A 294 -1 O HIS A 294 N CYS A 283 SHEET 1 S2 4 THR A 188 LEU A 190 0 SHEET 2 S2 4 SER A 216 ALA A 221 1 O ILE A 219 N LEU A 190 SHEET 3 S2 4 ARG A 162 VAL A 168 1 O ILE A 166 N VAL A 220 SHEET 4 S2 4 GLU A 241 LEU A 247 1 O THR A 245 N GLU A 167 LINK O GLY A 185 MG MG A 327 1555 1555 2.09 LINK OE1 GLU A 187 MG MG A 327 1555 1555 2.25 LINK O2A ADP A 324 MG MG A 325 1555 1555 3.02 LINK O2B ADP A 324 MG MG A 325 1555 1555 2.53 LINK O1A ADP A 324 MG MG A 325 1555 1555 2.52 LINK O1B ADP A 324 MG MG A 325 1555 1555 2.85 LINK O2B ADP A 326 MG MG A 327 1555 1555 1.96 LINK O2A ADP A 326 MG MG A 327 1555 1555 2.35 LINK MG MG A 327 O HOH A 386 1555 1555 2.10 LINK MG MG A 327 O HOH A 387 1555 1555 2.22 CRYST1 122.500 84.100 61.500 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016260 0.00000