data_4PY5 # _entry.id 4PY5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4PY5 NDB NA2974 RCSB RCSB085365 WWPDB D_1000085365 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PY5 _pdbx_database_status.recvd_initial_deposition_date 2014-03-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Figiel, M.' 1 'Nowotny, M.' 2 # _citation.id primary _citation.title 'Crystal structure of RNase H3-substrate complex reveals parallel evolution of RNA/DNA hybrid recognition.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 9285 _citation.page_last 9294 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25016521 _citation.pdbx_database_id_DOI 10.1093/nar/gku615 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Figiel, M.' 1 primary 'Nowotny, M.' 2 # _cell.entry_id 4PY5 _cell.length_a 58.449 _cell.length_b 67.661 _cell.length_c 107.514 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PY5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ribonuclease 30301.682 1 3.1.26.- D78N ? ? 2 polymer syn "5'-R(*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3'" 6053.649 1 ? ? ? ? 3 polymer syn "5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*C)-3'" 5845.785 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 7 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 7 water nat water 18.015 187 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMKLSSSEKEKLLKKLKALGAKEEKPPEHAQYRLRLNDAILTVYKSGSVVYGGKGREKLKELVAETVLSDTELPRIGCNE AGKGEFVGPLVVACIVADEKCLKRLIELGVKDSKKLSNEKVEELASEITETCHGKVKLLIPEKYNRAYSKFKNINRLLEA VYREIVSDLCEKFSPKVVVVDKFSNRAEEVLKDVVKGARLEVRPKAEDDLAVAAASIVAKAVRLKTMKELEKRFKVKLPE GNTGLAELLKKTPKELHEKLFKLHFSVGGKK ; ;SMKLSSSEKEKLLKKLKALGAKEEKPPEHAQYRLRLNDAILTVYKSGSVVYGGKGREKLKELVAETVLSDTELPRIGCNE AGKGEFVGPLVVACIVADEKCLKRLIELGVKDSKKLSNEKVEELASEITETCHGKVKLLIPEKYNRAYSKFKNINRLLEA VYREIVSDLCEKFSPKVVVVDKFSNRAEEVLKDVVKGARLEVRPKAEDDLAVAAASIVAKAVRLKTMKELEKRFKVKLPE GNTGLAELLKKTPKELHEKLFKLHFSVGGKK ; A ? 2 polyribonucleotide no no GAGUGCGACACCUGAUUCC GAGUGCGACACCUGAUUCC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)(DG)(DC)(DA)(DC)(DT)(DC)' GGAATCAGGTGTCGCACTC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LYS n 1 4 LEU n 1 5 SER n 1 6 SER n 1 7 SER n 1 8 GLU n 1 9 LYS n 1 10 GLU n 1 11 LYS n 1 12 LEU n 1 13 LEU n 1 14 LYS n 1 15 LYS n 1 16 LEU n 1 17 LYS n 1 18 ALA n 1 19 LEU n 1 20 GLY n 1 21 ALA n 1 22 LYS n 1 23 GLU n 1 24 GLU n 1 25 LYS n 1 26 PRO n 1 27 PRO n 1 28 GLU n 1 29 HIS n 1 30 ALA n 1 31 GLN n 1 32 TYR n 1 33 ARG n 1 34 LEU n 1 35 ARG n 1 36 LEU n 1 37 ASN n 1 38 ASP n 1 39 ALA n 1 40 ILE n 1 41 LEU n 1 42 THR n 1 43 VAL n 1 44 TYR n 1 45 LYS n 1 46 SER n 1 47 GLY n 1 48 SER n 1 49 VAL n 1 50 VAL n 1 51 TYR n 1 52 GLY n 1 53 GLY n 1 54 LYS n 1 55 GLY n 1 56 ARG n 1 57 GLU n 1 58 LYS n 1 59 LEU n 1 60 LYS n 1 61 GLU n 1 62 LEU n 1 63 VAL n 1 64 ALA n 1 65 GLU n 1 66 THR n 1 67 VAL n 1 68 LEU n 1 69 SER n 1 70 ASP n 1 71 THR n 1 72 GLU n 1 73 LEU n 1 74 PRO n 1 75 ARG n 1 76 ILE n 1 77 GLY n 1 78 CYS n 1 79 ASN n 1 80 GLU n 1 81 ALA n 1 82 GLY n 1 83 LYS n 1 84 GLY n 1 85 GLU n 1 86 PHE n 1 87 VAL n 1 88 GLY n 1 89 PRO n 1 90 LEU n 1 91 VAL n 1 92 VAL n 1 93 ALA n 1 94 CYS n 1 95 ILE n 1 96 VAL n 1 97 ALA n 1 98 ASP n 1 99 GLU n 1 100 LYS n 1 101 CYS n 1 102 LEU n 1 103 LYS n 1 104 ARG n 1 105 LEU n 1 106 ILE n 1 107 GLU n 1 108 LEU n 1 109 GLY n 1 110 VAL n 1 111 LYS n 1 112 ASP n 1 113 SER n 1 114 LYS n 1 115 LYS n 1 116 LEU n 1 117 SER n 1 118 ASN n 1 119 GLU n 1 120 LYS n 1 121 VAL n 1 122 GLU n 1 123 GLU n 1 124 LEU n 1 125 ALA n 1 126 SER n 1 127 GLU n 1 128 ILE n 1 129 THR n 1 130 GLU n 1 131 THR n 1 132 CYS n 1 133 HIS n 1 134 GLY n 1 135 LYS n 1 136 VAL n 1 137 LYS n 1 138 LEU n 1 139 LEU n 1 140 ILE n 1 141 PRO n 1 142 GLU n 1 143 LYS n 1 144 TYR n 1 145 ASN n 1 146 ARG n 1 147 ALA n 1 148 TYR n 1 149 SER n 1 150 LYS n 1 151 PHE n 1 152 LYS n 1 153 ASN n 1 154 ILE n 1 155 ASN n 1 156 ARG n 1 157 LEU n 1 158 LEU n 1 159 GLU n 1 160 ALA n 1 161 VAL n 1 162 TYR n 1 163 ARG n 1 164 GLU n 1 165 ILE n 1 166 VAL n 1 167 SER n 1 168 ASP n 1 169 LEU n 1 170 CYS n 1 171 GLU n 1 172 LYS n 1 173 PHE n 1 174 SER n 1 175 PRO n 1 176 LYS n 1 177 VAL n 1 178 VAL n 1 179 VAL n 1 180 VAL n 1 181 ASP n 1 182 LYS n 1 183 PHE n 1 184 SER n 1 185 ASN n 1 186 ARG n 1 187 ALA n 1 188 GLU n 1 189 GLU n 1 190 VAL n 1 191 LEU n 1 192 LYS n 1 193 ASP n 1 194 VAL n 1 195 VAL n 1 196 LYS n 1 197 GLY n 1 198 ALA n 1 199 ARG n 1 200 LEU n 1 201 GLU n 1 202 VAL n 1 203 ARG n 1 204 PRO n 1 205 LYS n 1 206 ALA n 1 207 GLU n 1 208 ASP n 1 209 ASP n 1 210 LEU n 1 211 ALA n 1 212 VAL n 1 213 ALA n 1 214 ALA n 1 215 ALA n 1 216 SER n 1 217 ILE n 1 218 VAL n 1 219 ALA n 1 220 LYS n 1 221 ALA n 1 222 VAL n 1 223 ARG n 1 224 LEU n 1 225 LYS n 1 226 THR n 1 227 MET n 1 228 LYS n 1 229 GLU n 1 230 LEU n 1 231 GLU n 1 232 LYS n 1 233 ARG n 1 234 PHE n 1 235 LYS n 1 236 VAL n 1 237 LYS n 1 238 LEU n 1 239 PRO n 1 240 GLU n 1 241 GLY n 1 242 ASN n 1 243 THR n 1 244 GLY n 1 245 LEU n 1 246 ALA n 1 247 GLU n 1 248 LEU n 1 249 LEU n 1 250 LYS n 1 251 LYS n 1 252 THR n 1 253 PRO n 1 254 LYS n 1 255 GLU n 1 256 LEU n 1 257 HIS n 1 258 GLU n 1 259 LYS n 1 260 LEU n 1 261 PHE n 1 262 LYS n 1 263 LEU n 1 264 HIS n 1 265 PHE n 1 266 SER n 1 267 VAL n 1 268 GLY n 1 269 GLY n 1 270 LYS n 1 271 LYS n 2 1 G n 2 2 A n 2 3 G n 2 4 U n 2 5 G n 2 6 C n 2 7 G n 2 8 A n 2 9 C n 2 10 A n 2 11 C n 2 12 C n 2 13 U n 2 14 G n 2 15 A n 2 16 U n 2 17 U n 2 18 C n 2 19 C n 3 1 DG n 3 2 DG n 3 3 DA n 3 4 DA n 3 5 DT n 3 6 DC n 3 7 DA n 3 8 DG n 3 9 DG n 3 10 DT n 3 11 DG n 3 12 DT n 3 13 DC n 3 14 DG n 3 15 DC n 3 16 DA n 3 17 DC n 3 18 DT n 3 19 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Theam_0945 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermovibrio ammonificans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 648996 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Star' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP E8T217_THEA1 E8T217 1 ;MKLSSSEKEKLLKKLKALGAKEEKPPEHAQYRLRLNDAILTVYKSGSVVYGGKGREKLKELVAETVLSDTELPRIGCDEA GKGEFVGPLVVACIVADEKCLKRLIELGVKDSKKLSNEKVEELASEITETCHGKVKLLIPEKYNRAYSKFKNINRLLEAV YREIVSDLCEKFSPKVVVVDKFSNRAEEVLKDVVKGARLEVRPKAEDDLAVAAASIVAKAVRLKTMKELEKRFKVKLPEG NTGLAELLKKTPKELHEKLFKLHFSVGGKK ; 1 ? 2 PDB 4PY5 4PY5 2 ? ? ? 3 PDB 4PY5 4PY5 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PY5 A 2 ? 271 ? E8T217 1 ? 270 ? 1 270 2 2 4PY5 B 1 ? 19 ? 4PY5 1 ? 19 ? 1 19 3 3 4PY5 C 1 ? 19 ? 4PY5 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PY5 SER A 1 ? UNP E8T217 ? ? 'EXPRESSION TAG' 0 1 1 4PY5 ASN A 79 ? UNP E8T217 ASP 78 'ENGINEERED MUTATION' 78 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4PY5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_percent_sol 51.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details ;0.2 M AmSO4, 0.1 M BisTris, 25% PEG 3350, 10 mM spermine tetrahydrochloride, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-01-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.entry_id 4PY5 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.1 _reflns.number_obs 25396 _reflns.number_all 25583 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.23 _reflns_shell.percent_possible_all 95.7 _reflns_shell.Rmerge_I_obs 0.564 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.66 _reflns_shell.pdbx_redundancy 4.27 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3890 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4PY5 _refine.ls_number_reflns_obs 25392 _refine.ls_number_reflns_all 25583 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.090 _refine.ls_d_res_high 2.100 _refine.ls_percent_reflns_obs 99.27 _refine.ls_R_factor_obs 0.1857 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1832 _refine.ls_R_factor_R_free 0.2330 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 1271 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 23.19 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2025 _refine_hist.pdbx_number_atoms_nucleic_acid 788 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 3042 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 42.090 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 2978 ? 'X-RAY DIFFRACTION' f_angle_d 1.074 ? ? 4194 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.298 ? ? 1197 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.058 ? ? 503 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 392 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.1001 2.1842 2518 0.2391 94.00 0.3135 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.1842 2.2836 2610 0.2068 100.00 0.2595 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.2836 2.4039 2672 0.1966 100.00 0.2309 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.4039 2.5545 2669 0.1959 100.00 0.2642 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.5545 2.7517 2666 0.2095 100.00 0.2971 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.7517 3.0286 2684 0.2071 100.00 0.2600 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.0286 3.4667 2713 0.1882 100.00 0.2386 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.4667 4.3669 2730 0.1574 100.00 0.1951 . . 144 . . . . 'X-RAY DIFFRACTION' . 4.3669 42.0982 2859 0.1688 100.00 0.2122 . . 151 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4PY5 _struct.title 'Thermovibrio ammonificans RNase H3 in complex with 19-mer RNA/DNA' _struct.pdbx_descriptor 'Ribonuclease (E.C.3.1.26.-), dna, rna' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PY5 _struct_keywords.pdbx_keywords Hydrolase/DNA/RNA _struct_keywords.text 'RNase H fold, RNA/DNA hybrid, Hydrolase-DNA-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 6 ? L N N 5 ? M N N 7 ? N N N 7 ? O N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? LEU A 19 ? SER A 4 LEU A 18 1 ? 15 HELX_P HELX_P2 2 ARG A 56 ? ASP A 70 ? ARG A 55 ASP A 69 1 ? 15 HELX_P HELX_P3 3 ASP A 98 ? GLY A 109 ? ASP A 97 GLY A 108 1 ? 12 HELX_P HELX_P4 4 ASP A 112 ? LEU A 116 ? ASP A 111 LEU A 115 5 ? 5 HELX_P HELX_P5 5 SER A 117 ? CYS A 132 ? SER A 116 CYS A 131 1 ? 16 HELX_P HELX_P6 6 ILE A 140 ? LYS A 152 ? ILE A 139 LYS A 151 1 ? 13 HELX_P HELX_P7 7 ASN A 153 ? SER A 174 ? ASN A 152 SER A 173 1 ? 22 HELX_P HELX_P8 8 ARG A 186 ? LYS A 192 ? ARG A 185 LYS A 191 1 ? 7 HELX_P HELX_P9 9 LYS A 205 ? ASP A 208 ? LYS A 204 ASP A 207 5 ? 4 HELX_P HELX_P10 10 ASP A 209 ? PHE A 234 ? ASP A 208 PHE A 233 1 ? 26 HELX_P HELX_P11 11 GLY A 244 ? THR A 252 ? GLY A 243 THR A 251 1 ? 9 HELX_P HELX_P12 12 PRO A 253 ? GLU A 255 ? PRO A 252 GLU A 254 5 ? 3 HELX_P HELX_P13 13 LEU A 256 ? PHE A 261 ? LEU A 255 PHE A 260 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 101 SG A ? ? 1_555 A CYS 132 SG ? ? A CYS 100 A CYS 131 1_555 ? ? ? ? ? ? ? 2.027 ? metalc1 metalc ? ? A ASN 79 OD1 ? ? ? 1_555 D MG . MG ? ? A ASN 78 A MG 301 1_555 ? ? ? ? ? ? ? 2.084 ? metalc2 metalc ? ? B A 8 OP2 ? ? ? 1_555 D MG . MG ? ? B A 8 A MG 301 1_555 ? ? ? ? ? ? ? 2.358 ? metalc3 metalc ? ? A GLU 80 O ? ? ? 1_555 D MG . MG ? ? A GLU 79 A MG 301 1_555 ? ? ? ? ? ? ? 2.492 ? metalc4 metalc ? ? B G 7 OP1 ? ? ? 1_555 D MG . MG ? ? B G 7 A MG 301 1_555 ? ? ? ? ? ? ? 2.935 ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 301 A HOH 425 1_555 ? ? ? ? ? ? ? 2.342 ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 301 A HOH 406 1_555 ? ? ? ? ? ? ? 2.563 ? hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 C DC 19 N3 ? ? B G 1 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B G 1 N2 ? ? ? 1_555 C DC 19 O2 ? ? B G 1 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B G 1 O6 ? ? ? 1_555 C DC 19 N4 ? ? B G 1 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B A 2 N1 ? ? ? 1_555 C DT 18 N3 ? ? B A 2 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B A 2 N6 ? ? ? 1_555 C DT 18 O4 ? ? B A 2 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B G 3 N1 ? ? ? 1_555 C DC 17 N3 ? ? B G 3 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B G 3 N2 ? ? ? 1_555 C DC 17 O2 ? ? B G 3 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B G 3 O6 ? ? ? 1_555 C DC 17 N4 ? ? B G 3 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B U 4 N3 ? ? ? 1_555 C DA 16 N1 ? ? B U 4 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B U 4 O4 ? ? ? 1_555 C DA 16 N6 ? ? B U 4 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B G 5 N1 ? ? ? 1_555 C DC 15 N3 ? ? B G 5 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B G 5 N2 ? ? ? 1_555 C DC 15 O2 ? ? B G 5 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B G 5 O6 ? ? ? 1_555 C DC 15 N4 ? ? B G 5 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B C 6 N3 ? ? ? 1_555 C DG 14 N1 ? ? B C 6 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B C 6 N4 ? ? ? 1_555 C DG 14 O6 ? ? B C 6 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B C 6 O2 ? ? ? 1_555 C DG 14 N2 ? ? B C 6 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B G 7 N1 ? ? ? 1_555 C DC 13 N3 ? ? B G 7 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B G 7 N2 ? ? ? 1_555 C DC 13 O2 ? ? B G 7 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B G 7 O6 ? ? ? 1_555 C DC 13 N4 ? ? B G 7 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B A 8 N1 ? ? ? 1_555 C DT 12 N3 ? ? B A 8 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B A 8 N6 ? ? ? 1_555 C DT 12 O4 ? ? B A 8 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B C 9 N3 ? ? ? 1_555 C DG 11 N1 ? ? B C 9 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B C 9 N4 ? ? ? 1_555 C DG 11 O6 ? ? B C 9 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? B C 9 O2 ? ? ? 1_555 C DG 11 N2 ? ? B C 9 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? B A 10 N1 ? ? ? 1_555 C DT 10 N3 ? ? B A 10 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? B A 10 N6 ? ? ? 1_555 C DT 10 O4 ? ? B A 10 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? B C 11 N3 ? ? ? 1_555 C DG 9 N1 ? ? B C 11 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? B C 11 N4 ? ? ? 1_555 C DG 9 O6 ? ? B C 11 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? B C 11 O2 ? ? ? 1_555 C DG 9 N2 ? ? B C 11 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? B C 12 N3 ? ? ? 1_555 C DG 8 N1 ? ? B C 12 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? B C 12 N4 ? ? ? 1_555 C DG 8 O6 ? ? B C 12 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? B C 12 O2 ? ? ? 1_555 C DG 8 N2 ? ? B C 12 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? B U 13 N3 ? ? ? 1_555 C DA 7 N1 ? ? B U 13 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? B U 13 O4 ? ? ? 1_555 C DA 7 N6 ? ? B U 13 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? B G 14 N1 ? ? ? 1_555 C DC 6 N3 ? ? B G 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? B G 14 N2 ? ? ? 1_555 C DC 6 O2 ? ? B G 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? B G 14 O6 ? ? ? 1_555 C DC 6 N4 ? ? B G 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? B A 15 N1 ? ? ? 1_555 C DT 5 N3 ? ? B A 15 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? B A 15 N6 ? ? ? 1_555 C DT 5 O4 ? ? B A 15 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? B U 16 N3 ? ? ? 1_555 C DA 4 N1 ? ? B U 16 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog41 hydrog ? ? B U 16 O4 ? ? ? 1_555 C DA 4 N6 ? ? B U 16 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? B U 17 N3 ? ? ? 1_555 C DA 3 N1 ? ? B U 17 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? B U 17 O4 ? ? ? 1_555 C DA 3 N6 ? ? B U 17 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? B C 18 N3 ? ? ? 1_555 C DG 2 N1 ? ? B C 18 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog45 hydrog ? ? B C 18 N4 ? ? ? 1_555 C DG 2 O6 ? ? B C 18 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? B C 18 O2 ? ? ? 1_555 C DG 2 N2 ? ? B C 18 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog47 hydrog ? ? B C 19 N3 ? ? ? 1_555 C DG 1 N1 ? ? B C 19 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog48 hydrog ? ? B C 19 N4 ? ? ? 1_555 C DG 1 O6 ? ? B C 19 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog49 hydrog ? ? B C 19 O2 ? ? ? 1_555 C DG 1 N2 ? ? B C 19 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 73 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 72 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 74 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 73 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 22 ? GLU A 24 ? LYS A 21 GLU A 23 A 2 ALA A 30 ? LEU A 36 ? ALA A 29 LEU A 35 A 3 ALA A 39 ? TYR A 44 ? ALA A 38 TYR A 43 A 4 VAL A 49 ? GLY A 53 ? VAL A 48 GLY A 52 B 1 HIS A 133 ? LEU A 139 ? HIS A 132 LEU A 138 B 2 LEU A 90 ? ALA A 97 ? LEU A 89 ALA A 96 B 3 ARG A 75 ? ALA A 81 ? ARG A 74 ALA A 80 B 4 VAL A 177 ? ASP A 181 ? VAL A 176 ASP A 180 B 5 ARG A 199 ? ARG A 203 ? ARG A 198 ARG A 202 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 24 ? N GLU A 23 O ARG A 33 ? O ARG A 32 A 2 3 N GLN A 31 ? N GLN A 30 O VAL A 43 ? O VAL A 42 A 3 4 N THR A 42 ? N THR A 41 O VAL A 50 ? O VAL A 49 B 1 2 O LYS A 137 ? O LYS A 136 N VAL A 92 ? N VAL A 91 B 2 3 O ALA A 97 ? O ALA A 96 N ARG A 75 ? N ARG A 74 B 3 4 N ILE A 76 ? N ILE A 75 O VAL A 179 ? O VAL A 178 B 4 5 N VAL A 178 ? N VAL A 177 O GLU A 201 ? O GLU A 200 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 301' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 302' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A 303' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 304' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 305' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 306' AC7 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 A 307' AC8 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 308' AC9 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASN A 79 ? ASN A 78 . ? 1_555 ? 2 AC1 6 GLU A 80 ? GLU A 79 . ? 1_555 ? 3 AC1 6 HOH M . ? HOH A 406 . ? 1_555 ? 4 AC1 6 HOH M . ? HOH A 425 . ? 1_555 ? 5 AC1 6 G B 7 ? G B 7 . ? 1_555 ? 6 AC1 6 A B 8 ? A B 8 . ? 1_555 ? 7 AC2 6 ARG A 75 ? ARG A 74 . ? 1_555 ? 8 AC2 6 ARG A 199 ? ARG A 198 . ? 1_555 ? 9 AC2 6 ARG A 203 ? ARG A 202 . ? 1_555 ? 10 AC2 6 HOH M . ? HOH A 429 . ? 1_555 ? 11 AC2 6 HOH M . ? HOH A 500 . ? 1_555 ? 12 AC2 6 HOH M . ? HOH A 501 . ? 1_555 ? 13 AC3 5 HIS A 133 ? HIS A 132 . ? 4_567 ? 14 AC3 5 GLY A 134 ? GLY A 133 . ? 4_567 ? 15 AC3 5 LYS A 251 ? LYS A 250 . ? 1_555 ? 16 AC3 5 HOH M . ? HOH A 421 . ? 1_555 ? 17 AC3 5 HOH M . ? HOH A 460 . ? 1_555 ? 18 AC4 4 SER A 6 ? SER A 5 . ? 4_477 ? 19 AC4 4 LYS A 9 ? LYS A 8 . ? 4_477 ? 20 AC4 4 GLY A 197 ? GLY A 196 . ? 1_555 ? 21 AC4 4 HOH M . ? HOH A 508 . ? 1_555 ? 22 AC5 3 LYS A 54 ? LYS A 53 . ? 1_555 ? 23 AC5 3 GLY A 55 ? GLY A 54 . ? 1_555 ? 24 AC5 3 ARG A 56 ? ARG A 55 . ? 1_555 ? 25 AC6 6 ASN A 155 ? ASN A 154 . ? 1_555 ? 26 AC6 6 ARG A 156 ? ARG A 155 . ? 1_555 ? 27 AC6 6 ASN A 185 ? ASN A 184 . ? 1_555 ? 28 AC6 6 ARG A 186 ? ARG A 185 . ? 1_555 ? 29 AC6 6 DC C 17 ? DC C 17 . ? 1_555 ? 30 AC6 6 HOH O . ? HOH C 218 . ? 1_555 ? 31 AC7 2 PRO A 253 ? PRO A 252 . ? 1_555 ? 32 AC7 2 LYS A 254 ? LYS A 253 . ? 1_555 ? 33 AC8 3 HIS A 29 ? HIS A 28 . ? 4_477 ? 34 AC8 3 LYS A 45 ? LYS A 44 . ? 4_477 ? 35 AC8 3 LEU A 200 ? LEU A 199 . ? 1_555 ? 36 AC9 6 DC C 15 ? DC C 15 . ? 1_555 ? 37 AC9 6 DA C 16 ? DA C 16 . ? 1_555 ? 38 AC9 6 HOH O . ? HOH C 211 . ? 1_555 ? 39 AC9 6 HOH O . ? HOH C 216 . ? 1_555 ? 40 AC9 6 HOH O . ? HOH C 217 . ? 1_555 ? 41 AC9 6 HOH O . ? HOH C 221 . ? 1_555 ? # _database_PDB_matrix.entry_id 4PY5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PY5 _atom_sites.fract_transf_matrix[1][1] 0.017109 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014780 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009301 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 LYS 15 14 14 LYS LYS A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 LYS 17 16 16 LYS LYS A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 LYS 22 21 21 LYS LYS A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 PRO 27 26 26 PRO PRO A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 HIS 29 28 28 HIS HIS A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 GLN 31 30 30 GLN GLN A . n A 1 32 TYR 32 31 31 TYR TYR A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 ARG 35 34 34 ARG ARG A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 ASN 37 36 36 ASN ASN A . n A 1 38 ASP 38 37 37 ASP ASP A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 TYR 44 43 43 TYR TYR A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 TYR 51 50 50 TYR TYR A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 ARG 56 55 55 ARG ARG A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 LYS 60 59 59 LYS LYS A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 GLU 65 64 64 GLU GLU A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 SER 69 68 68 SER SER A . n A 1 70 ASP 70 69 69 ASP ASP A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 GLU 72 71 71 GLU GLU A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 ARG 75 74 74 ARG ARG A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 CYS 78 77 77 CYS CYS A . n A 1 79 ASN 79 78 78 ASN ASN A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 ALA 81 80 80 ALA ALA A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 LYS 83 82 82 LYS LYS A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 PRO 89 88 88 PRO PRO A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 CYS 94 93 93 CYS CYS A . n A 1 95 ILE 95 94 94 ILE ILE A . n A 1 96 VAL 96 95 95 VAL VAL A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 LYS 100 99 99 LYS LYS A . n A 1 101 CYS 101 100 100 CYS CYS A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 LYS 103 102 102 LYS LYS A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 ILE 106 105 105 ILE ILE A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 LYS 111 110 110 LYS LYS A . n A 1 112 ASP 112 111 111 ASP ASP A . n A 1 113 SER 113 112 112 SER SER A . n A 1 114 LYS 114 113 113 LYS LYS A . n A 1 115 LYS 115 114 114 LYS LYS A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 SER 117 116 116 SER SER A . n A 1 118 ASN 118 117 117 ASN ASN A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 GLU 123 122 122 GLU GLU A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 SER 126 125 125 SER SER A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 THR 129 128 128 THR THR A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 THR 131 130 130 THR THR A . n A 1 132 CYS 132 131 131 CYS CYS A . n A 1 133 HIS 133 132 132 HIS HIS A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 LYS 135 134 134 LYS LYS A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 PRO 141 140 140 PRO PRO A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 TYR 144 143 143 TYR TYR A . n A 1 145 ASN 145 144 144 ASN ASN A . n A 1 146 ARG 146 145 145 ARG ARG A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 SER 149 148 148 SER SER A . n A 1 150 LYS 150 149 149 LYS LYS A . n A 1 151 PHE 151 150 150 PHE PHE A . n A 1 152 LYS 152 151 151 LYS LYS A . n A 1 153 ASN 153 152 152 ASN ASN A . n A 1 154 ILE 154 153 153 ILE ILE A . n A 1 155 ASN 155 154 154 ASN ASN A . n A 1 156 ARG 156 155 155 ARG ARG A . n A 1 157 LEU 157 156 156 LEU LEU A . n A 1 158 LEU 158 157 157 LEU LEU A . n A 1 159 GLU 159 158 158 GLU GLU A . n A 1 160 ALA 160 159 159 ALA ALA A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 TYR 162 161 161 TYR TYR A . n A 1 163 ARG 163 162 162 ARG ARG A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 ILE 165 164 164 ILE ILE A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 SER 167 166 166 SER SER A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 LEU 169 168 168 LEU LEU A . n A 1 170 CYS 170 169 169 CYS CYS A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 LYS 172 171 171 LYS LYS A . n A 1 173 PHE 173 172 172 PHE PHE A . n A 1 174 SER 174 173 173 SER SER A . n A 1 175 PRO 175 174 174 PRO PRO A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 VAL 177 176 176 VAL VAL A . n A 1 178 VAL 178 177 177 VAL VAL A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 VAL 180 179 179 VAL VAL A . n A 1 181 ASP 181 180 180 ASP ASP A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 PHE 183 182 182 PHE PHE A . n A 1 184 SER 184 183 183 SER SER A . n A 1 185 ASN 185 184 184 ASN ASN A . n A 1 186 ARG 186 185 185 ARG ARG A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 GLU 189 188 188 GLU GLU A . n A 1 190 VAL 190 189 189 VAL VAL A . n A 1 191 LEU 191 190 190 LEU LEU A . n A 1 192 LYS 192 191 191 LYS LYS A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 VAL 194 193 193 VAL VAL A . n A 1 195 VAL 195 194 194 VAL VAL A . n A 1 196 LYS 196 195 195 LYS LYS A . n A 1 197 GLY 197 196 196 GLY GLY A . n A 1 198 ALA 198 197 197 ALA ALA A . n A 1 199 ARG 199 198 198 ARG ARG A . n A 1 200 LEU 200 199 199 LEU LEU A . n A 1 201 GLU 201 200 200 GLU GLU A . n A 1 202 VAL 202 201 201 VAL VAL A . n A 1 203 ARG 203 202 202 ARG ARG A . n A 1 204 PRO 204 203 203 PRO PRO A . n A 1 205 LYS 205 204 204 LYS LYS A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 GLU 207 206 206 GLU GLU A . n A 1 208 ASP 208 207 207 ASP ASP A . n A 1 209 ASP 209 208 208 ASP ASP A . n A 1 210 LEU 210 209 209 LEU LEU A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 VAL 212 211 211 VAL VAL A . n A 1 213 ALA 213 212 212 ALA ALA A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 ALA 215 214 214 ALA ALA A . n A 1 216 SER 216 215 215 SER SER A . n A 1 217 ILE 217 216 216 ILE ILE A . n A 1 218 VAL 218 217 217 VAL VAL A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 LYS 220 219 219 LYS LYS A . n A 1 221 ALA 221 220 220 ALA ALA A . n A 1 222 VAL 222 221 221 VAL VAL A . n A 1 223 ARG 223 222 222 ARG ARG A . n A 1 224 LEU 224 223 223 LEU LEU A . n A 1 225 LYS 225 224 224 LYS LYS A . n A 1 226 THR 226 225 225 THR THR A . n A 1 227 MET 227 226 226 MET MET A . n A 1 228 LYS 228 227 227 LYS LYS A . n A 1 229 GLU 229 228 228 GLU GLU A . n A 1 230 LEU 230 229 229 LEU LEU A . n A 1 231 GLU 231 230 230 GLU GLU A . n A 1 232 LYS 232 231 231 LYS LYS A . n A 1 233 ARG 233 232 232 ARG ARG A . n A 1 234 PHE 234 233 233 PHE PHE A . n A 1 235 LYS 235 234 234 LYS LYS A . n A 1 236 VAL 236 235 235 VAL VAL A . n A 1 237 LYS 237 236 236 LYS LYS A . n A 1 238 LEU 238 237 237 LEU LEU A . n A 1 239 PRO 239 238 238 PRO PRO A . n A 1 240 GLU 240 239 239 GLU GLU A . n A 1 241 GLY 241 240 240 GLY GLY A . n A 1 242 ASN 242 241 241 ASN ASN A . n A 1 243 THR 243 242 242 THR THR A . n A 1 244 GLY 244 243 243 GLY GLY A . n A 1 245 LEU 245 244 244 LEU LEU A . n A 1 246 ALA 246 245 245 ALA ALA A . n A 1 247 GLU 247 246 246 GLU GLU A . n A 1 248 LEU 248 247 247 LEU LEU A . n A 1 249 LEU 249 248 248 LEU LEU A . n A 1 250 LYS 250 249 249 LYS LYS A . n A 1 251 LYS 251 250 250 LYS LYS A . n A 1 252 THR 252 251 251 THR THR A . n A 1 253 PRO 253 252 252 PRO PRO A . n A 1 254 LYS 254 253 253 LYS LYS A . n A 1 255 GLU 255 254 254 GLU GLU A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 HIS 257 256 256 HIS HIS A . n A 1 258 GLU 258 257 257 GLU GLU A . n A 1 259 LYS 259 258 258 LYS LYS A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 PHE 261 260 260 PHE PHE A . n A 1 262 LYS 262 261 261 LYS LYS A . n A 1 263 LEU 263 262 262 LEU LEU A . n A 1 264 HIS 264 263 263 HIS HIS A . n A 1 265 PHE 265 264 264 PHE PHE A . n A 1 266 SER 266 265 265 SER SER A . n A 1 267 VAL 267 266 266 VAL VAL A . n A 1 268 GLY 268 267 ? ? ? A . n A 1 269 GLY 269 268 ? ? ? A . n A 1 270 LYS 270 269 ? ? ? A . n A 1 271 LYS 271 270 ? ? ? A . n B 2 1 G 1 1 1 G G B . n B 2 2 A 2 2 2 A A B . n B 2 3 G 3 3 3 G G B . n B 2 4 U 4 4 4 U U B . n B 2 5 G 5 5 5 G G B . n B 2 6 C 6 6 6 C C B . n B 2 7 G 7 7 7 G G B . n B 2 8 A 8 8 8 A A B . n B 2 9 C 9 9 9 C C B . n B 2 10 A 10 10 10 A A B . n B 2 11 C 11 11 11 C C B . n B 2 12 C 12 12 12 C C B . n B 2 13 U 13 13 13 U U B . n B 2 14 G 14 14 14 G G B . n B 2 15 A 15 15 15 A A B . n B 2 16 U 16 16 16 U U B . n B 2 17 U 17 17 17 U U B . n B 2 18 C 18 18 18 C C B . n B 2 19 C 19 19 19 C C B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DG 2 2 2 DG DG C . n C 3 3 DA 3 3 3 DA DA C . n C 3 4 DA 4 4 4 DA DA C . n C 3 5 DT 5 5 5 DT DT C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DA 7 7 7 DA DA C . n C 3 8 DG 8 8 8 DG DG C . n C 3 9 DG 9 9 9 DG DG C . n C 3 10 DT 10 10 10 DT DT C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DT 12 12 12 DT DT C . n C 3 13 DC 13 13 13 DC DC C . n C 3 14 DG 14 14 14 DG DG C . n C 3 15 DC 15 15 15 DC DC C . n C 3 16 DA 16 16 16 DA DA C . n C 3 17 DC 17 17 17 DC DC C . n C 3 18 DT 18 18 18 DT DT C . n C 3 19 DC 19 19 19 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 301 1 MG MG A . E 5 SO4 1 302 1 SO4 SO4 A . F 5 SO4 1 303 2 SO4 SO4 A . G 5 SO4 1 304 3 SO4 SO4 A . H 5 SO4 1 305 5 SO4 SO4 A . I 5 SO4 1 306 6 SO4 SO4 A . J 5 SO4 1 307 7 SO4 SO4 A . K 6 GOL 1 308 1 GOL GOL A . L 5 SO4 1 101 4 SO4 SO4 C . M 7 HOH 1 401 1 HOH HOH A . M 7 HOH 2 402 2 HOH HOH A . M 7 HOH 3 403 3 HOH HOH A . M 7 HOH 4 404 5 HOH HOH A . M 7 HOH 5 405 6 HOH HOH A . M 7 HOH 6 406 7 HOH HOH A . M 7 HOH 7 407 9 HOH HOH A . M 7 HOH 8 408 10 HOH HOH A . M 7 HOH 9 409 11 HOH HOH A . M 7 HOH 10 410 12 HOH HOH A . M 7 HOH 11 411 13 HOH HOH A . M 7 HOH 12 412 14 HOH HOH A . M 7 HOH 13 413 15 HOH HOH A . M 7 HOH 14 414 17 HOH HOH A . M 7 HOH 15 415 19 HOH HOH A . M 7 HOH 16 416 20 HOH HOH A . M 7 HOH 17 417 21 HOH HOH A . M 7 HOH 18 418 22 HOH HOH A . M 7 HOH 19 419 23 HOH HOH A . M 7 HOH 20 420 24 HOH HOH A . M 7 HOH 21 421 25 HOH HOH A . M 7 HOH 22 422 26 HOH HOH A . M 7 HOH 23 423 28 HOH HOH A . M 7 HOH 24 424 29 HOH HOH A . M 7 HOH 25 425 30 HOH HOH A . M 7 HOH 26 426 31 HOH HOH A . M 7 HOH 27 427 32 HOH HOH A . M 7 HOH 28 428 33 HOH HOH A . M 7 HOH 29 429 34 HOH HOH A . M 7 HOH 30 430 35 HOH HOH A . M 7 HOH 31 431 36 HOH HOH A . M 7 HOH 32 432 37 HOH HOH A . M 7 HOH 33 433 38 HOH HOH A . M 7 HOH 34 434 39 HOH HOH A . M 7 HOH 35 435 40 HOH HOH A . M 7 HOH 36 436 41 HOH HOH A . M 7 HOH 37 437 42 HOH HOH A . M 7 HOH 38 438 43 HOH HOH A . M 7 HOH 39 439 44 HOH HOH A . M 7 HOH 40 440 45 HOH HOH A . M 7 HOH 41 441 47 HOH HOH A . M 7 HOH 42 442 48 HOH HOH A . M 7 HOH 43 443 49 HOH HOH A . M 7 HOH 44 444 50 HOH HOH A . M 7 HOH 45 445 51 HOH HOH A . M 7 HOH 46 446 52 HOH HOH A . M 7 HOH 47 447 53 HOH HOH A . M 7 HOH 48 448 54 HOH HOH A . M 7 HOH 49 449 55 HOH HOH A . M 7 HOH 50 450 56 HOH HOH A . M 7 HOH 51 451 57 HOH HOH A . M 7 HOH 52 452 58 HOH HOH A . M 7 HOH 53 453 59 HOH HOH A . M 7 HOH 54 454 60 HOH HOH A . M 7 HOH 55 455 61 HOH HOH A . M 7 HOH 56 456 63 HOH HOH A . M 7 HOH 57 457 64 HOH HOH A . M 7 HOH 58 458 65 HOH HOH A . M 7 HOH 59 459 66 HOH HOH A . M 7 HOH 60 460 67 HOH HOH A . M 7 HOH 61 461 68 HOH HOH A . M 7 HOH 62 462 69 HOH HOH A . M 7 HOH 63 463 70 HOH HOH A . M 7 HOH 64 464 71 HOH HOH A . M 7 HOH 65 465 72 HOH HOH A . M 7 HOH 66 466 73 HOH HOH A . M 7 HOH 67 467 74 HOH HOH A . M 7 HOH 68 468 75 HOH HOH A . M 7 HOH 69 469 77 HOH HOH A . M 7 HOH 70 470 84 HOH HOH A . M 7 HOH 71 471 85 HOH HOH A . M 7 HOH 72 472 99 HOH HOH A . M 7 HOH 73 473 100 HOH HOH A . M 7 HOH 74 474 101 HOH HOH A . M 7 HOH 75 475 102 HOH HOH A . M 7 HOH 76 476 103 HOH HOH A . M 7 HOH 77 477 104 HOH HOH A . M 7 HOH 78 478 105 HOH HOH A . M 7 HOH 79 479 106 HOH HOH A . M 7 HOH 80 480 107 HOH HOH A . M 7 HOH 81 481 108 HOH HOH A . M 7 HOH 82 482 109 HOH HOH A . M 7 HOH 83 483 111 HOH HOH A . M 7 HOH 84 484 112 HOH HOH A . M 7 HOH 85 485 113 HOH HOH A . M 7 HOH 86 486 114 HOH HOH A . M 7 HOH 87 487 115 HOH HOH A . M 7 HOH 88 488 116 HOH HOH A . M 7 HOH 89 489 117 HOH HOH A . M 7 HOH 90 490 118 HOH HOH A . M 7 HOH 91 491 119 HOH HOH A . M 7 HOH 92 492 120 HOH HOH A . M 7 HOH 93 493 129 HOH HOH A . M 7 HOH 94 494 130 HOH HOH A . M 7 HOH 95 495 131 HOH HOH A . M 7 HOH 96 496 132 HOH HOH A . M 7 HOH 97 497 133 HOH HOH A . M 7 HOH 98 498 134 HOH HOH A . M 7 HOH 99 499 135 HOH HOH A . M 7 HOH 100 500 136 HOH HOH A . M 7 HOH 101 501 137 HOH HOH A . M 7 HOH 102 502 138 HOH HOH A . M 7 HOH 103 503 139 HOH HOH A . M 7 HOH 104 504 140 HOH HOH A . M 7 HOH 105 505 141 HOH HOH A . M 7 HOH 106 506 143 HOH HOH A . M 7 HOH 107 507 144 HOH HOH A . M 7 HOH 108 508 146 HOH HOH A . M 7 HOH 109 509 147 HOH HOH A . M 7 HOH 110 510 148 HOH HOH A . M 7 HOH 111 511 149 HOH HOH A . M 7 HOH 112 512 150 HOH HOH A . M 7 HOH 113 513 151 HOH HOH A . M 7 HOH 114 514 152 HOH HOH A . M 7 HOH 115 515 153 HOH HOH A . M 7 HOH 116 516 154 HOH HOH A . M 7 HOH 117 517 155 HOH HOH A . M 7 HOH 118 518 157 HOH HOH A . M 7 HOH 119 519 158 HOH HOH A . M 7 HOH 120 520 159 HOH HOH A . M 7 HOH 121 521 160 HOH HOH A . M 7 HOH 122 522 165 HOH HOH A . M 7 HOH 123 523 166 HOH HOH A . M 7 HOH 124 524 167 HOH HOH A . M 7 HOH 125 525 168 HOH HOH A . M 7 HOH 126 526 169 HOH HOH A . M 7 HOH 127 527 170 HOH HOH A . M 7 HOH 128 528 171 HOH HOH A . M 7 HOH 129 529 172 HOH HOH A . M 7 HOH 130 530 173 HOH HOH A . M 7 HOH 131 531 174 HOH HOH A . M 7 HOH 132 532 175 HOH HOH A . M 7 HOH 133 533 176 HOH HOH A . M 7 HOH 134 534 177 HOH HOH A . M 7 HOH 135 535 178 HOH HOH A . M 7 HOH 136 536 179 HOH HOH A . M 7 HOH 137 537 180 HOH HOH A . M 7 HOH 138 538 184 HOH HOH A . M 7 HOH 139 539 186 HOH HOH A . M 7 HOH 140 540 187 HOH HOH A . M 7 HOH 141 541 81 HOH HOH A . N 7 HOH 1 101 8 HOH HOH B . N 7 HOH 2 102 16 HOH HOH B . N 7 HOH 3 103 18 HOH HOH B . N 7 HOH 4 104 27 HOH HOH B . N 7 HOH 5 105 62 HOH HOH B . N 7 HOH 6 106 78 HOH HOH B . N 7 HOH 7 107 79 HOH HOH B . N 7 HOH 8 108 80 HOH HOH B . N 7 HOH 9 109 82 HOH HOH B . N 7 HOH 10 110 86 HOH HOH B . N 7 HOH 11 111 94 HOH HOH B . N 7 HOH 12 112 96 HOH HOH B . N 7 HOH 13 113 97 HOH HOH B . N 7 HOH 14 114 98 HOH HOH B . N 7 HOH 15 115 110 HOH HOH B . N 7 HOH 16 116 124 HOH HOH B . N 7 HOH 17 117 125 HOH HOH B . N 7 HOH 18 118 126 HOH HOH B . N 7 HOH 19 119 163 HOH HOH B . N 7 HOH 20 120 164 HOH HOH B . N 7 HOH 21 121 181 HOH HOH B . O 7 HOH 1 201 4 HOH HOH C . O 7 HOH 2 202 46 HOH HOH C . O 7 HOH 3 203 76 HOH HOH C . O 7 HOH 4 204 83 HOH HOH C . O 7 HOH 5 205 87 HOH HOH C . O 7 HOH 6 206 88 HOH HOH C . O 7 HOH 7 207 89 HOH HOH C . O 7 HOH 8 208 90 HOH HOH C . O 7 HOH 9 209 91 HOH HOH C . O 7 HOH 10 210 92 HOH HOH C . O 7 HOH 11 211 93 HOH HOH C . O 7 HOH 12 212 95 HOH HOH C . O 7 HOH 13 213 121 HOH HOH C . O 7 HOH 14 214 122 HOH HOH C . O 7 HOH 15 215 123 HOH HOH C . O 7 HOH 16 216 127 HOH HOH C . O 7 HOH 17 217 128 HOH HOH C . O 7 HOH 18 218 142 HOH HOH C . O 7 HOH 19 219 145 HOH HOH C . O 7 HOH 20 220 156 HOH HOH C . O 7 HOH 21 221 161 HOH HOH C . O 7 HOH 22 222 162 HOH HOH C . O 7 HOH 23 223 182 HOH HOH C . O 7 HOH 24 224 183 HOH HOH C . O 7 HOH 25 225 185 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6500 ? 1 MORE -125 ? 1 'SSA (A^2)' 16530 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 79 ? A ASN 78 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 OP2 ? B A 8 ? B A 8 ? 1_555 172.7 ? 2 OD1 ? A ASN 79 ? A ASN 78 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? A GLU 80 ? A GLU 79 ? 1_555 84.1 ? 3 OP2 ? B A 8 ? B A 8 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? A GLU 80 ? A GLU 79 ? 1_555 103.3 ? 4 OD1 ? A ASN 79 ? A ASN 78 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 OP1 ? B G 7 ? B G 7 ? 1_555 89.3 ? 5 OP2 ? B A 8 ? B A 8 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 OP1 ? B G 7 ? B G 7 ? 1_555 89.3 ? 6 O ? A GLU 80 ? A GLU 79 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 OP1 ? B G 7 ? B G 7 ? 1_555 102.4 ? 7 OD1 ? A ASN 79 ? A ASN 78 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 425 ? 1_555 98.7 ? 8 OP2 ? B A 8 ? B A 8 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 425 ? 1_555 74.0 ? 9 O ? A GLU 80 ? A GLU 79 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 425 ? 1_555 176.2 ? 10 OP1 ? B G 7 ? B G 7 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 425 ? 1_555 75.0 ? 11 OD1 ? A ASN 79 ? A ASN 78 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 406 ? 1_555 96.3 ? 12 OP2 ? B A 8 ? B A 8 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 406 ? 1_555 83.6 ? 13 O ? A GLU 80 ? A GLU 79 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 406 ? 1_555 90.0 ? 14 OP1 ? B G 7 ? B G 7 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 406 ? 1_555 166.9 ? 15 O ? M HOH . ? A HOH 425 ? 1_555 MG ? D MG . ? A MG 301 ? 1_555 O ? M HOH . ? A HOH 406 ? 1_555 92.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-30 2 'Structure model' 1 1 2014-08-27 3 'Structure model' 1 2 2014-10-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX 'model building' AutoSol ? 1 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 2 XDS 'data reduction' . ? 3 XDS 'data scaling' . ? 4 PHENIX phasing AutoSol ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" C DA 4 ? ? "C3'" C DA 4 ? ? "C2'" C DA 4 ? ? 97.92 102.20 -4.28 0.70 N 2 1 "C4'" C DT 5 ? ? "C3'" C DT 5 ? ? "C2'" C DT 5 ? ? 97.99 102.20 -4.21 0.70 N 3 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? N1 C DT 5 ? ? 110.43 108.30 2.13 0.30 N 4 1 "O4'" C DC 6 ? ? "C1'" C DC 6 ? ? N1 C DC 6 ? ? 110.97 108.30 2.67 0.30 N 5 1 "O4'" C DA 7 ? ? "C1'" C DA 7 ? ? N9 C DA 7 ? ? 110.29 108.30 1.99 0.30 N 6 1 "O4'" C DT 12 ? ? "C1'" C DT 12 ? ? N1 C DT 12 ? ? 112.88 108.30 4.58 0.30 N 7 1 "O4'" C DC 13 ? ? "C4'" C DC 13 ? ? "C3'" C DC 13 ? ? 101.82 104.50 -2.68 0.40 N 8 1 "O4'" C DC 13 ? ? "C1'" C DC 13 ? ? N1 C DC 13 ? ? 111.35 108.30 3.05 0.30 N 9 1 "O4'" C DG 14 ? ? "C1'" C DG 14 ? ? N9 C DG 14 ? ? 110.14 108.30 1.84 0.30 N 10 1 "O4'" C DC 17 ? ? "C1'" C DC 17 ? ? N1 C DC 17 ? ? 110.89 108.30 2.59 0.30 N 11 1 "O4'" C DT 18 ? ? "C4'" C DT 18 ? ? "C3'" C DT 18 ? ? 101.63 104.50 -2.87 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 36 ? ? 58.97 -111.92 2 1 ASP A 97 ? ? -102.13 -169.35 3 1 LYS A 151 ? ? 49.48 27.23 4 1 ASN A 152 ? ? -171.42 122.33 5 1 LYS A 195 ? ? 49.10 -125.84 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 9 ? CD ? A GLU 10 CD 2 1 Y 1 A GLU 9 ? OE1 ? A GLU 10 OE1 3 1 Y 1 A GLU 9 ? OE2 ? A GLU 10 OE2 4 1 Y 1 A LYS 13 ? CD ? A LYS 14 CD 5 1 Y 1 A LYS 13 ? CE ? A LYS 14 CE 6 1 Y 1 A LYS 13 ? NZ ? A LYS 14 NZ 7 1 Y 1 A LYS 16 ? NZ ? A LYS 17 NZ 8 1 Y 1 A LYS 21 ? CG ? A LYS 22 CG 9 1 Y 1 A LYS 21 ? CD ? A LYS 22 CD 10 1 Y 1 A LYS 21 ? CE ? A LYS 22 CE 11 1 Y 1 A LYS 21 ? NZ ? A LYS 22 NZ 12 1 Y 1 A LYS 24 ? CD ? A LYS 25 CD 13 1 Y 1 A LYS 24 ? CE ? A LYS 25 CE 14 1 Y 1 A LYS 24 ? NZ ? A LYS 25 NZ 15 1 Y 1 A ASN 36 ? OD1 ? A ASN 37 OD1 16 1 Y 1 A ASN 36 ? ND2 ? A ASN 37 ND2 17 1 Y 1 A LYS 53 ? CD ? A LYS 54 CD 18 1 Y 1 A LYS 53 ? CE ? A LYS 54 CE 19 1 Y 1 A LYS 53 ? NZ ? A LYS 54 NZ 20 1 Y 1 A LYS 57 ? CG ? A LYS 58 CG 21 1 Y 1 A LYS 57 ? CD ? A LYS 58 CD 22 1 Y 1 A LYS 57 ? CE ? A LYS 58 CE 23 1 Y 1 A LYS 57 ? NZ ? A LYS 58 NZ 24 1 Y 1 A LYS 99 ? CG ? A LYS 100 CG 25 1 Y 1 A LYS 99 ? CD ? A LYS 100 CD 26 1 Y 1 A LYS 99 ? CE ? A LYS 100 CE 27 1 Y 1 A LYS 99 ? NZ ? A LYS 100 NZ 28 1 Y 1 A LYS 102 ? NZ ? A LYS 103 NZ 29 1 Y 1 A GLU 118 ? CG ? A GLU 119 CG 30 1 Y 1 A GLU 118 ? CD ? A GLU 119 CD 31 1 Y 1 A GLU 118 ? OE1 ? A GLU 119 OE1 32 1 Y 1 A GLU 118 ? OE2 ? A GLU 119 OE2 33 1 Y 1 A LYS 119 ? CD ? A LYS 120 CD 34 1 Y 1 A LYS 119 ? CE ? A LYS 120 CE 35 1 Y 1 A LYS 119 ? NZ ? A LYS 120 NZ 36 1 Y 1 A GLU 122 ? CD ? A GLU 123 CD 37 1 Y 1 A GLU 122 ? OE1 ? A GLU 123 OE1 38 1 Y 1 A GLU 122 ? OE2 ? A GLU 123 OE2 39 1 Y 1 A LYS 134 ? CD ? A LYS 135 CD 40 1 Y 1 A LYS 134 ? CE ? A LYS 135 CE 41 1 Y 1 A LYS 134 ? NZ ? A LYS 135 NZ 42 1 Y 1 A LYS 136 ? CE ? A LYS 137 CE 43 1 Y 1 A LYS 136 ? NZ ? A LYS 137 NZ 44 1 Y 1 A LYS 142 ? CE ? A LYS 143 CE 45 1 Y 1 A LYS 142 ? NZ ? A LYS 143 NZ 46 1 Y 1 A LYS 149 ? NZ ? A LYS 150 NZ 47 1 Y 1 A LYS 151 ? CD ? A LYS 152 CD 48 1 Y 1 A LYS 151 ? CE ? A LYS 152 CE 49 1 Y 1 A LYS 151 ? NZ ? A LYS 152 NZ 50 1 Y 1 A LYS 191 ? CD ? A LYS 192 CD 51 1 Y 1 A LYS 191 ? CE ? A LYS 192 CE 52 1 Y 1 A LYS 191 ? NZ ? A LYS 192 NZ 53 1 Y 1 A LYS 204 ? CD ? A LYS 205 CD 54 1 Y 1 A LYS 204 ? CE ? A LYS 205 CE 55 1 Y 1 A LYS 204 ? NZ ? A LYS 205 NZ 56 1 Y 1 A LYS 224 ? NZ ? A LYS 225 NZ 57 1 Y 1 A LYS 227 ? CE ? A LYS 228 CE 58 1 Y 1 A LYS 227 ? NZ ? A LYS 228 NZ 59 1 Y 1 A LYS 231 ? CE ? A LYS 232 CE 60 1 Y 1 A LYS 231 ? NZ ? A LYS 232 NZ 61 1 Y 1 A LYS 234 ? CD ? A LYS 235 CD 62 1 Y 1 A LYS 234 ? CE ? A LYS 235 CE 63 1 Y 1 A LYS 234 ? NZ ? A LYS 235 NZ 64 1 Y 1 A LYS 236 ? CD ? A LYS 237 CD 65 1 Y 1 A LYS 236 ? CE ? A LYS 237 CE 66 1 Y 1 A LYS 236 ? NZ ? A LYS 237 NZ 67 1 Y 1 A GLU 246 ? CD ? A GLU 247 CD 68 1 Y 1 A GLU 246 ? OE1 ? A GLU 247 OE1 69 1 Y 1 A GLU 246 ? OE2 ? A GLU 247 OE2 70 1 Y 1 A LYS 253 ? CD ? A LYS 254 CD 71 1 Y 1 A LYS 253 ? CE ? A LYS 254 CE 72 1 Y 1 A LYS 253 ? NZ ? A LYS 254 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 267 ? A GLY 268 2 1 Y 1 A GLY 268 ? A GLY 269 3 1 Y 1 A LYS 269 ? A LYS 270 4 1 Y 1 A LYS 270 ? A LYS 271 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4PY5 'double helix' 4PY5 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 C DC 19 1_555 0.044 -0.318 -0.083 -8.182 -8.925 -0.745 1 B_G1:DC19_C B 1 ? C 19 ? 19 1 1 B A 2 1_555 C DT 18 1_555 0.068 -0.325 -0.066 -4.722 -16.649 -0.097 2 B_A2:DT18_C B 2 ? C 18 ? 20 1 1 B G 3 1_555 C DC 17 1_555 -0.683 -0.321 0.166 -6.412 -13.703 4.325 3 B_G3:DC17_C B 3 ? C 17 ? 19 1 1 B U 4 1_555 C DA 16 1_555 0.106 -0.043 0.114 -4.659 -12.473 -1.963 4 B_U4:DA16_C B 4 ? C 16 ? 20 1 1 B G 5 1_555 C DC 15 1_555 -0.244 -0.185 -0.172 -7.148 -7.777 -1.781 5 B_G5:DC15_C B 5 ? C 15 ? 19 1 1 B C 6 1_555 C DG 14 1_555 0.063 -0.220 0.028 1.881 -9.165 -1.797 6 B_C6:DG14_C B 6 ? C 14 ? 19 1 1 B G 7 1_555 C DC 13 1_555 -0.045 -0.099 -0.086 -7.961 -11.628 3.957 7 B_G7:DC13_C B 7 ? C 13 ? 19 1 1 B A 8 1_555 C DT 12 1_555 -0.123 -0.228 0.182 -5.673 -14.757 -1.290 8 B_A8:DT12_C B 8 ? C 12 ? 20 1 1 B C 9 1_555 C DG 11 1_555 0.262 -0.187 0.205 -1.022 -16.047 1.081 9 B_C9:DG11_C B 9 ? C 11 ? 19 1 1 B A 10 1_555 C DT 10 1_555 0.062 -0.209 0.096 -4.210 -12.429 2.120 10 B_A10:DT10_C B 10 ? C 10 ? 20 1 1 B C 11 1_555 C DG 9 1_555 0.349 -0.196 -0.104 4.037 -14.696 1.279 11 B_C11:DG9_C B 11 ? C 9 ? 19 1 1 B C 12 1_555 C DG 8 1_555 0.314 -0.171 -0.019 -2.124 -12.987 0.752 12 B_C12:DG8_C B 12 ? C 8 ? 19 1 1 B U 13 1_555 C DA 7 1_555 -0.081 -0.084 0.002 -0.164 -8.896 5.661 13 B_U13:DA7_C B 13 ? C 7 ? 20 1 1 B G 14 1_555 C DC 6 1_555 -0.276 -0.216 0.190 0.333 -8.763 0.670 14 B_G14:DC6_C B 14 ? C 6 ? 19 1 1 B A 15 1_555 C DT 5 1_555 0.239 -0.191 0.089 1.381 -10.127 -2.621 15 B_A15:DT5_C B 15 ? C 5 ? 20 1 1 B U 16 1_555 C DA 4 1_555 -0.015 -0.157 0.288 -1.107 -14.476 2.168 16 B_U16:DA4_C B 16 ? C 4 ? 20 1 1 B U 17 1_555 C DA 3 1_555 0.061 0.017 0.072 4.882 -13.323 1.661 17 B_U17:DA3_C B 17 ? C 3 ? 20 1 1 B C 18 1_555 C DG 2 1_555 0.174 -0.182 -0.359 11.669 -11.262 1.207 18 B_C18:DG2_C B 18 ? C 2 ? 19 1 1 B C 19 1_555 C DG 1 1_555 0.230 -0.276 -0.211 7.730 -6.281 -1.397 19 B_C19:DG1_C B 19 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 C DC 19 1_555 B A 2 1_555 C DT 18 1_555 0.001 -1.735 3.258 2.528 4.711 32.044 -3.895 0.423 2.971 8.461 -4.540 32.475 1 BB_G1A2:DT18DC19_CC B 1 ? C 19 ? B 2 ? C 18 ? 1 B A 2 1_555 C DT 18 1_555 B G 3 1_555 C DC 17 1_555 0.757 -2.090 3.294 -0.432 6.412 25.032 -6.330 -1.805 2.671 14.491 0.977 25.831 2 BB_A2G3:DC17DT18_CC B 2 ? C 18 ? B 3 ? C 17 ? 1 B G 3 1_555 C DC 17 1_555 B U 4 1_555 C DA 16 1_555 -0.643 -1.422 3.164 0.346 3.685 37.083 -2.688 1.050 3.008 5.777 -0.542 37.261 3 BB_G3U4:DA16DC17_CC B 3 ? C 17 ? B 4 ? C 16 ? 1 B U 4 1_555 C DA 16 1_555 B G 5 1_555 C DC 15 1_555 0.039 -1.346 3.256 4.286 7.578 27.654 -4.272 0.817 2.772 15.378 -8.697 28.966 4 BB_U4G5:DC15DA16_CC B 4 ? C 16 ? B 5 ? C 15 ? 1 B G 5 1_555 C DC 15 1_555 B C 6 1_555 C DG 14 1_555 0.701 -1.333 3.038 -0.744 7.462 34.617 -3.165 -1.249 2.687 12.362 1.232 35.396 5 BB_G5C6:DG14DC15_CC B 5 ? C 15 ? B 6 ? C 14 ? 1 B C 6 1_555 C DG 14 1_555 B G 7 1_555 C DC 13 1_555 0.666 -2.126 3.383 3.897 14.233 27.059 -6.504 -0.573 2.102 27.937 -7.648 30.756 6 BB_C6G7:DC13DG14_CC B 6 ? C 14 ? B 7 ? C 13 ? 1 B G 7 1_555 C DC 13 1_555 B A 8 1_555 C DT 12 1_555 1.029 -2.326 3.211 2.774 7.942 17.763 -10.108 -1.867 2.118 24.047 -8.400 19.640 7 BB_G7A8:DT12DC13_CC B 7 ? C 13 ? B 8 ? C 12 ? 1 B A 8 1_555 C DT 12 1_555 B C 9 1_555 C DG 11 1_555 0.123 -1.441 3.189 0.598 1.115 36.353 -2.459 -0.117 3.146 1.786 -0.958 36.374 8 BB_A8C9:DG11DT12_CC B 8 ? C 12 ? B 9 ? C 11 ? 1 B C 9 1_555 C DG 11 1_555 B A 10 1_555 C DT 10 1_555 0.229 -1.741 3.262 1.440 7.986 27.759 -5.133 -0.162 2.675 16.211 -2.923 28.899 9 BB_C9A10:DT10DG11_CC B 9 ? C 11 ? B 10 ? C 10 ? 1 B A 10 1_555 C DT 10 1_555 B C 11 1_555 C DG 9 1_555 0.680 -2.164 3.157 4.431 -0.176 29.439 -4.176 -0.414 3.234 -0.345 -8.658 29.764 10 BB_A10C11:DG9DT10_CC B 10 ? C 10 ? B 11 ? C 9 ? 1 B C 11 1_555 C DG 9 1_555 B C 12 1_555 C DG 8 1_555 -0.573 -2.007 3.398 -0.440 6.869 29.282 -5.237 1.017 2.871 13.355 0.855 30.063 11 BB_C11C12:DG8DG9_CC B 11 ? C 9 ? B 12 ? C 8 ? 1 B C 12 1_555 C DG 8 1_555 B U 13 1_555 C DA 7 1_555 0.647 -1.257 3.215 0.838 4.311 29.956 -3.244 -1.076 3.025 8.284 -1.611 30.269 12 BB_C12U13:DA7DG8_CC B 12 ? C 8 ? B 13 ? C 7 ? 1 B U 13 1_555 C DA 7 1_555 B G 14 1_555 C DC 6 1_555 -0.257 -1.617 3.308 -1.865 3.239 29.539 -3.815 0.116 3.127 6.321 3.640 29.769 13 BB_U13G14:DC6DA7_CC B 13 ? C 7 ? B 14 ? C 6 ? 1 B G 14 1_555 C DC 6 1_555 B A 15 1_555 C DT 5 1_555 -0.386 -1.926 3.230 -0.455 1.951 32.124 -3.812 0.617 3.115 3.521 0.821 32.185 14 BB_G14A15:DT5DC6_CC B 14 ? C 6 ? B 15 ? C 5 ? 1 B A 15 1_555 C DT 5 1_555 B U 16 1_555 C DA 4 1_555 0.150 -1.852 3.273 -1.266 2.665 32.346 -3.768 -0.484 3.106 4.771 2.266 32.477 15 BB_A15U16:DA4DT5_CC B 15 ? C 5 ? B 16 ? C 4 ? 1 B U 16 1_555 C DA 4 1_555 B U 17 1_555 C DA 3 1_555 -0.812 -1.813 3.094 -1.505 4.335 27.097 -4.788 1.372 2.815 9.168 3.184 27.476 16 BB_U16U17:DA3DA4_CC B 16 ? C 4 ? B 17 ? C 3 ? 1 B U 17 1_555 C DA 3 1_555 B C 18 1_555 C DG 2 1_555 0.195 -1.311 3.078 0.480 3.109 32.395 -2.840 -0.271 2.945 5.555 -0.857 32.543 17 BB_U17C18:DG2DA3_CC B 17 ? C 3 ? B 18 ? C 2 ? 1 B C 18 1_555 C DG 2 1_555 B C 19 1_555 C DG 1 1_555 0.030 -1.812 3.440 -1.182 5.725 34.174 -3.928 -0.233 3.102 9.655 1.993 34.655 18 BB_C18C19:DG1DG2_CC B 18 ? C 2 ? B 19 ? C 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 'SULFATE ION' SO4 6 GLYCEROL GOL 7 water HOH #