HEADER CELL ADHESION 06-MAY-14 4QB7 TITLE CRYSTAL STRUCTURE OF A FIMBRIAL PROTEIN (BVU_2522) FROM BACTEROIDES TITLE 2 VULGATUS ATCC 8482 AT 2.55 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 22-379; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482 / DSM 1447 / NCTC 11154; SOURCE 5 GENE: BVU_2522; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS FIMBRIAL PROTEIN, PF13149 FAMILY, DUF3988, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4QB7 1 REMARK SEQADV REVDAT 4 22-APR-20 4QB7 1 JRNL LINK REVDAT 3 22-NOV-17 4QB7 1 REMARK REVDAT 2 24-DEC-14 4QB7 1 TITLE REVDAT 1 02-JUL-14 4QB7 0 JRNL AUTH Q.XU,M.SHOJI,S.SHIBATA,M.NAITO,K.SATO,M.A.ELSLIGER, JRNL AUTH 2 J.C.GRANT,H.L.AXELROD,H.J.CHIU,C.L.FARR,L.JAROSZEWSKI, JRNL AUTH 3 M.W.KNUTH,A.M.DEACON,A.GODZIK,S.A.LESLEY,M.A.CURTIS, JRNL AUTH 4 K.NAKAYAMA,I.A.WILSON JRNL TITL A DISTINCT TYPE OF PILUS FROM THE HUMAN MICROBIOME. JRNL REF CELL V. 165 690 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27062925 JRNL DOI 10.1016/J.CELL.2016.03.016 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 35430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1776 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 18 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.62 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.47 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2890 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2244 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2740 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE : 0.2505 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.19 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 150 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2626 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 282 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.10630 REMARK 3 B22 (A**2) : -6.13730 REMARK 3 B33 (A**2) : 0.03100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.323 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2757 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3765 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1226 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 80 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 376 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2757 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 385 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3091 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.21 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.04 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.83 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|31 - 368} REMARK 3 ORIGIN FOR THE GROUP (A): 11.8300 67.9638 33.7638 REMARK 3 T TENSOR REMARK 3 T11: -0.0318 T22: 0.0091 REMARK 3 T33: -0.0342 T12: 0.0146 REMARK 3 T13: 0.0052 T23: 0.1316 REMARK 3 L TENSOR REMARK 3 L11: 0.7374 L22: 1.2026 REMARK 3 L33: 1.4875 L12: 0.8169 REMARK 3 L13: -0.7714 L23: -1.1915 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: -0.1474 S13: -0.1037 REMARK 3 S21: -0.0460 S22: 0.0944 S23: 0.1332 REMARK 3 S31: -0.0664 S32: -0.0452 S33: -0.1107 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. SULFATE(SO4) AND CHLORIDE (CL) IONS MODELED WERE REMARK 3 PRESENT IN CRYSTALLIZATION CONDITIONS. 5. RAMACHANDRAN OUTLIER REMARK 3 (A357) IS SUPPORTED BY DENSITY. REMARK 4 REMARK 4 4QB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369,0.97934,0.97919 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35435 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 46.607 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.77600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20M SODIUM CHLORIDE, 2.00M AMMONIUM REMARK 280 SULFATE, 0.1M SODIUM CACODYLATE PH 6.5, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 93.06000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 105.91500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 93.06000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 105.91500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 93.06000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 105.91500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 93.06000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.91500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLU A 22 REMARK 465 MSE A 23 REMARK 465 THR A 24 REMARK 465 GLU A 25 REMARK 465 MSE A 26 REMARK 465 ASN A 27 REMARK 465 PRO A 28 REMARK 465 ASP A 29 REMARK 465 THR A 30 REMARK 465 GLN A 43 REMARK 465 THR A 44 REMARK 465 ARG A 45 REMARK 465 GLY A 46 REMARK 465 THR A 47 REMARK 465 ASP A 369 REMARK 465 ASP A 370 REMARK 465 SER A 371 REMARK 465 ASP A 372 REMARK 465 SER A 373 REMARK 465 ASP A 374 REMARK 465 ILE A 375 REMARK 465 ASN A 376 REMARK 465 VAL A 377 REMARK 465 GLU A 378 REMARK 465 LYS A 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 57 -129.68 -88.35 REMARK 500 PRO A 81 72.47 -67.93 REMARK 500 SER A 93 -57.39 68.37 REMARK 500 ASP A 94 -0.36 -141.95 REMARK 500 ASP A 107 -158.19 -90.89 REMARK 500 ASN A 176 57.31 -150.92 REMARK 500 SER A 219 -31.17 -130.18 REMARK 500 ASP A 261 78.08 -155.69 REMARK 500 ASN A 295 -121.77 50.60 REMARK 500 LYS A 357 139.47 -28.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 423 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-385726 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (22-379) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4QB7 A 22 379 UNP A6L3B5 A6L3B5_BACV8 22 379 SEQADV 4QB7 GLY A 0 UNP A6L3B5 EXPRESSION TAG SEQRES 1 A 359 GLY GLU MSE THR GLU MSE ASN PRO ASP THR ASN ARG THR SEQRES 2 A 359 ILE GLY LEU ASP VAL TYR THR GLU VAL GLN THR ARG GLY SEQRES 3 A 359 THR GLU THR THR THR SER THR LEU LYS ALA ASN ALA GLY SEQRES 4 A 359 PHE GLY ILE PHE ALA TYR GLN THR SER SER ALA GLY TRP SEQRES 5 A 359 ASN SER GLU LYS GLY ASN THR THR PRO ASN PHE MSE TYR SEQRES 6 A 359 ASN GLU HIS ALA THR TRP THR SER ASP SER TRP GLY TYR SEQRES 7 A 359 THR ASN LEU ARG PHE TRP PRO ILE ASP ASP LYS LYS ILE SEQRES 8 A 359 THR PHE PHE ALA TYR ALA PRO TYR GLU SER LYS PRO GLU SEQRES 9 A 359 VAL GLY THR ASP GLN LYS ILE THR LEU SER GLY GLN ASN SEQRES 10 A 359 ALA LYS GLY ALA PRO THR ILE THR PHE GLU VAL LYS THR SEQRES 11 A 359 SER ASN ASN TRP LYS ASP MSE ILE ASP LEU VAL THR ASP SEQRES 12 A 359 CYS HIS THR ALA ILE GLN ASP GLN THR ASN GLU SER ASN SEQRES 13 A 359 LYS GLY THR VAL GLN PHE LYS PHE SER HIS VAL LEU THR SEQRES 14 A 359 GLN ILE ALA ASN ILE LYS VAL LYS PRO ASP VAL ASN LEU SEQRES 15 A 359 GLY THR ASP THR LYS ILE PHE VAL THR GLY LEU LYS LEU SEQRES 16 A 359 ASP PRO GLY SER THR THR LEU TYR ASN LYS ALA VAL TYR SEQRES 17 A 359 LYS PHE ASP ASN ASP THR TRP GLU ALA ILE SER PRO ASP SEQRES 18 A 359 ALA SER TYR PHE SER THR GLU GLN ASP LEU SER ASP PHE SEQRES 19 A 359 LEU ASN LYS THR THR THR ASP GLN TRP GLY TYR ASN LYS SEQRES 20 A 359 SER SER ILE ASN VAL SER ASP ASP GLN ASN ALA THR ALA SEQRES 21 A 359 LEU PHE SER ASP THR GLU ALA LEU TYR PHE ILE PRO VAL SEQRES 22 A 359 ASN ASN LYS ASN GLY THR THR ASN ALA GLY ASP LEU LYS SEQRES 23 A 359 LEU LYS ILE ASN TYR ASP ILE VAL THR LYS VAL THR ASP SEQRES 24 A 359 THR SER ASN LEU THR SER THR ILE THR ASN LYS GLU VAL SEQRES 25 A 359 SER LEU PRO LYS ASN THR PHE LYS LYS GLY THR LYS HIS SEQRES 26 A 359 THR TYR VAL LEU THR ILE LYS MSE ASN ALA ILE LYS ILE SEQRES 27 A 359 THR VAL GLU ASP ASN MSE GLU GLY TRP THR ASP ASP SER SEQRES 28 A 359 ASP SER ASP ILE ASN VAL GLU LYS MODRES 4QB7 MSE A 84 MET SELENOMETHIONINE MODRES 4QB7 MSE A 157 MET SELENOMETHIONINE MODRES 4QB7 MSE A 353 MET SELENOMETHIONINE MODRES 4QB7 MSE A 364 MET SELENOMETHIONINE HET MSE A 84 8 HET MSE A 157 8 HET MSE A 353 8 HET MSE A 364 8 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET SO4 A 409 5 HET SO4 A 410 5 HET SO4 A 411 5 HET SO4 A 412 5 HET SO4 A 413 5 HET SO4 A 414 5 HET SO4 A 415 5 HET SO4 A 416 5 HET SO4 A 417 5 HET CL A 418 1 HET CL A 419 1 HET CL A 420 1 HET CL A 421 1 HET CL A 422 1 HET CL A 423 1 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 SO4 17(O4 S 2-) FORMUL 19 CL 6(CL 1-) FORMUL 25 HOH *282(H2 O) HELIX 1 1 THR A 49 ASN A 57 1 9 HELIX 2 2 GLY A 71 LYS A 76 1 6 HELIX 3 3 GLY A 77 THR A 79 5 3 HELIX 4 4 HIS A 165 GLN A 169 5 5 HELIX 5 5 ASN A 294 GLY A 298 5 5 SHEET 1 A 2 GLY A 35 VAL A 38 0 SHEET 2 A 2 THR A 179 PHE A 182 1 O PHE A 182 N ASP A 37 SHEET 1 B 6 SER A 95 GLY A 97 0 SHEET 2 B 6 MSE A 84 THR A 92 -1 N THR A 90 O GLY A 97 SHEET 3 B 6 PHE A 60 THR A 67 -1 N PHE A 60 O ALA A 89 SHEET 4 B 6 LYS A 110 ALA A 117 -1 O THR A 112 N TYR A 65 SHEET 5 B 6 VAL A 161 ASP A 163 -1 O ASP A 163 N ALA A 115 SHEET 6 B 6 SER A 185 HIS A 186 -1 O SER A 185 N THR A 162 SHEET 1 C 4 ILE A 131 LEU A 133 0 SHEET 2 C 4 THR A 143 GLU A 147 -1 O THR A 145 N THR A 132 SHEET 3 C 4 TYR A 223 LYS A 229 -1 O TYR A 228 N ILE A 144 SHEET 4 C 4 THR A 234 ALA A 237 -1 O THR A 234 N LYS A 229 SHEET 1 D 4 ILE A 131 LEU A 133 0 SHEET 2 D 4 THR A 143 GLU A 147 -1 O THR A 145 N THR A 132 SHEET 3 D 4 TYR A 223 LYS A 229 -1 O TYR A 228 N ILE A 144 SHEET 4 D 4 SER A 243 TYR A 244 -1 O SER A 243 N ASN A 224 SHEET 1 E 3 THR A 279 ALA A 280 0 SHEET 2 E 3 THR A 189 PRO A 198 -1 N VAL A 196 O THR A 279 SHEET 3 E 3 LEU A 288 PHE A 290 -1 O PHE A 290 N THR A 189 SHEET 1 F 4 THR A 279 ALA A 280 0 SHEET 2 F 4 THR A 189 PRO A 198 -1 N VAL A 196 O THR A 279 SHEET 3 F 4 THR A 343 ILE A 351 1 O HIS A 345 N GLN A 190 SHEET 4 F 4 ILE A 358 GLY A 366 -1 O ASN A 363 N THR A 346 SHEET 1 G 3 GLN A 249 ASP A 250 0 SHEET 2 G 3 THR A 206 ASP A 216 -1 N LEU A 215 O GLN A 249 SHEET 3 G 3 ILE A 270 ASN A 271 -1 O ILE A 270 N VAL A 210 SHEET 1 H 4 GLN A 249 ASP A 250 0 SHEET 2 H 4 THR A 206 ASP A 216 -1 N LEU A 215 O GLN A 249 SHEET 3 H 4 LYS A 306 THR A 318 -1 O LYS A 306 N ASP A 216 SHEET 4 H 4 SER A 321 SER A 333 -1 O VAL A 332 N LEU A 307 LINK C PHE A 83 N MSE A 84 1555 1555 1.34 LINK C MSE A 84 N TYR A 85 1555 1555 1.34 LINK C ASP A 156 N MSE A 157 1555 1555 1.36 LINK C MSE A 157 N ILE A 158 1555 1555 1.33 LINK C LYS A 352 N MSE A 353 1555 1555 1.34 LINK C MSE A 353 N ASN A 354 1555 1555 1.34 LINK C ASN A 363 N MSE A 364 1555 1555 1.34 LINK C MSE A 364 N GLU A 365 1555 1555 1.31 CISPEP 1 ALA A 117 PRO A 118 0 2.57 CISPEP 2 SER A 239 PRO A 240 0 1.86 SITE 1 AC1 4 LYS A 197 ALA A 278 HOH A 600 HOH A 631 SITE 1 AC2 7 GLY A 264 TYR A 265 ASN A 266 LYS A 267 SITE 2 AC2 7 ASP A 312 THR A 326 HOH A 503 SITE 1 AC3 5 ASN A 78 THR A 79 THR A 80 ASN A 82 SITE 2 AC3 5 LYS A 177 SITE 1 AC4 3 ASN A 271 HOH A 526 HOH A 633 SITE 1 AC5 2 LYS A 267 SER A 268 SITE 1 AC6 6 GLY A 135 GLN A 136 ASN A 137 ALA A 138 SITE 2 AC6 6 HOH A 701 HOH A 714 SITE 1 AC7 7 SER A 69 ALA A 70 GLY A 71 ASP A 94 SITE 2 AC7 7 SER A 95 LYS A 110 ASP A 170 SITE 1 AC8 6 TYR A 311 ILE A 327 ILE A 351 LYS A 352 SITE 2 AC8 6 ALA A 355 ILE A 356 SITE 1 AC9 7 THR A 211 GLY A 212 ASN A 266 LYS A 267 SITE 2 AC9 7 ASN A 310 HOH A 501 HOH A 503 SITE 1 BC1 4 ARG A 32 PRO A 105 ILE A 106 LYS A 109 SITE 1 BC2 3 TYR A 39 GLN A 181 HOH A 641 SITE 1 BC3 2 HIS A 165 THR A 166 SITE 1 BC4 4 TRP A 96 TYR A 98 LEU A 101 HOH A 669 SITE 1 BC5 2 TYR A 119 SER A 121 SITE 1 BC6 3 TYR A 223 GLU A 236 ALA A 237 SITE 1 BC7 2 SER A 151 ASN A 152 SITE 1 BC8 3 ASN A 271 ASP A 274 THR A 279 SITE 1 BC9 2 THR A 258 THR A 259 SITE 1 CC1 1 THR A 150 SITE 1 CC2 1 GLU A 248 SITE 1 CC3 1 ALA A 302 SITE 1 CC4 3 SER A 219 THR A 220 THR A 221 CRYST1 54.220 186.120 211.830 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018443 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004721 0.00000