data_4QK9 # _entry.id 4QK9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QK9 pdb_00004qk9 10.2210/pdb4qk9/pdb NDB NA3046 ? ? RCSB RCSB086160 ? ? WWPDB D_1000086160 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4QK8 . unspecified PDB 4QKA . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QK9 _pdbx_database_status.recvd_initial_deposition_date 2014-06-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, A.' 1 'Serganov, A.' 2 # _citation.id primary _citation.title 'Structural insights into recognition of c-di-AMP by the ydaO riboswitch.' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 10 _citation.page_first 787 _citation.page_last 792 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25086507 _citation.pdbx_database_id_DOI 10.1038/nchembio.1607 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, A.' 1 ? primary 'Serganov, A.' 2 ? # _cell.entry_id 4QK9 _cell.length_a 110.265 _cell.length_b 110.265 _cell.length_c 110.265 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QK9 _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'C-di-AMP riboswitch' 40379.836 1 ? ? ? ? 2 non-polymer syn ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 658.412 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 11 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)GCGCUGAAUUCCCUGAAGGGAAACGGGGGACCCAAUCUUCAGGGGUGAAUCCCACGUAAGUGGGUAGGGCUAGUC UCUUUCGGCCCGAACCCGUCAGCUAACCUCGUAAGCGUGGAAAGAGG(23G) ; _entity_poly.pdbx_seq_one_letter_code_can ;GGCGCUGAAUUCCCUGAAGGGAAACGGGGGACCCAAUCUUCAGGGGUGAAUCCCACGUAAGUGGGUAGGGCUAGUCUCUU UCGGCCCGAACCCGUCAGCUAACCUCGUAAGCGUGGAAAGAGGX ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 G n 1 5 C n 1 6 U n 1 7 G n 1 8 A n 1 9 A n 1 10 U n 1 11 U n 1 12 C n 1 13 C n 1 14 C n 1 15 U n 1 16 G n 1 17 A n 1 18 A n 1 19 G n 1 20 G n 1 21 G n 1 22 A n 1 23 A n 1 24 A n 1 25 C n 1 26 G n 1 27 G n 1 28 G n 1 29 G n 1 30 G n 1 31 A n 1 32 C n 1 33 C n 1 34 C n 1 35 A n 1 36 A n 1 37 U n 1 38 C n 1 39 U n 1 40 U n 1 41 C n 1 42 A n 1 43 G n 1 44 G n 1 45 G n 1 46 G n 1 47 U n 1 48 G n 1 49 A n 1 50 A n 1 51 U n 1 52 C n 1 53 C n 1 54 C n 1 55 A n 1 56 C n 1 57 G n 1 58 U n 1 59 A n 1 60 A n 1 61 G n 1 62 U n 1 63 G n 1 64 G n 1 65 G n 1 66 U n 1 67 A n 1 68 G n 1 69 G n 1 70 G n 1 71 C n 1 72 U n 1 73 A n 1 74 G n 1 75 U n 1 76 C n 1 77 U n 1 78 C n 1 79 U n 1 80 U n 1 81 U n 1 82 C n 1 83 G n 1 84 G n 1 85 C n 1 86 C n 1 87 C n 1 88 G n 1 89 A n 1 90 A n 1 91 C n 1 92 C n 1 93 C n 1 94 G n 1 95 U n 1 96 C n 1 97 A n 1 98 G n 1 99 C n 1 100 U n 1 101 A n 1 102 A n 1 103 C n 1 104 C n 1 105 U n 1 106 C n 1 107 G n 1 108 U n 1 109 A n 1 110 A n 1 111 G n 1 112 C n 1 113 G n 1 114 U n 1 115 G n 1 116 G n 1 117 A n 1 118 A n 1 119 A n 1 120 G n 1 121 A n 1 122 G n 1 123 G n 1 124 23G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'In vitro transcription' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4QK9 _struct_ref.pdbx_db_accession 4QK9 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ;GGCGCUGAAUUCCCUGAAGGGAAACGGGGGACCCAAUCUUCAGGGGUGAAUCCCACGUAAGUGGGUAGGGCUAGUCUCUU UCGGCCCGAACCCGUCAGCUAACCUCGUAAGCGUGGAAAGAGGX ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QK9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4QK9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 124 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 23G 'RNA OH 3 prime terminus' n ;GUANOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C10 H13 N5 O10 P2' 425.185 2BA non-polymer . ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate" 'C20 H24 N10 O12 P2' 658.412 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 4QK9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 55.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;0.5mM Spermine, 20mM Magnesium acetrate, 100mM Sodium achloride, 0.05M Sodium cacodylate pH6.5, 20%MPD, pH 6.0, VAPOR DIFFUSION, SITTING DROP ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 1' _diffrn_detector.pdbx_collection_date 2013-12-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4QK9 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 30 _reflns.d_resolution_high 3.05 _reflns.number_obs 9173 _reflns.number_all 9193 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.05 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4QK9 _refine.ls_number_reflns_obs 9173 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.470 _refine.ls_d_res_high 3.05 _refine.ls_percent_reflns_obs 99.77 _refine.ls_R_factor_obs 0.1862 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1819 _refine.ls_R_factor_R_free 0.2241 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.21 _refine.ls_number_reflns_R_free 937 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 4QK8' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.pdbx_overall_phase_error 21.79 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2516 _refine_hist.pdbx_number_atoms_ligand 99 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2615 _refine_hist.d_res_high 3.05 _refine_hist.d_res_low 29.470 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.005 ? ? 2916 ? 'X-RAY DIFFRACTION' f_angle_d 0.987 ? ? 4547 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.193 ? ? 1442 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.043 ? ? 601 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 121 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 3.0010 3.1591 1169 0.2391 100.00 0.2829 . . 132 . . . . 'X-RAY DIFFRACTION' . 3.1591 3.3567 1159 0.2081 100.00 0.2602 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.3567 3.6155 1155 0.2004 100.00 0.2295 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.6155 3.9786 1186 0.1728 100.00 0.2222 . . 130 . . . . 'X-RAY DIFFRACTION' . 3.9786 4.5524 1157 0.1603 100.00 0.2276 . . 136 . . . . 'X-RAY DIFFRACTION' . 4.5524 5.7287 1191 0.1632 100.00 0.1870 . . 134 . . . . 'X-RAY DIFFRACTION' . 5.7287 29.4710 1219 0.1851 99.00 0.2272 . . 143 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4QK9 _struct.title 'Thermovirga lienii c-di-AMP riboswitch' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QK9 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'c-di-AMP riboswitch, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 123 "O3'" ? ? ? 1_555 A 23G 124 P ? ? A G 123 A 23G 124 1_555 ? ? ? ? ? ? ? 1.607 ? ? metalc1 metalc ? ? A U 6 OP1 ? ? ? 1_555 H MG . MG ? ? A U 6 A MG 207 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc2 metalc ? ? A G 28 OP1 ? ? ? 1_555 E MG . MG ? ? A G 28 A MG 204 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc3 metalc ? ? A G 30 OP2 ? ? ? 1_555 D MG . MG ? ? A G 30 A MG 203 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc4 metalc ? ? A A 35 OP2 ? ? ? 1_555 N MG . MG ? ? A A 35 A MG 213 1_555 ? ? ? ? ? ? ? 2.540 ? ? metalc5 metalc ? ? A U 47 OP1 ? ? ? 1_555 E MG . MG ? ? A U 47 A MG 204 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc6 metalc ? ? A C 71 OP1 ? ? ? 1_555 H MG . MG ? ? A C 71 A MG 207 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc7 metalc ? ? A G 98 OP1 ? ? ? 1_555 D MG . MG ? ? A G 98 A MG 203 1_555 ? ? ? ? ? ? ? 2.390 ? ? metalc8 metalc ? ? A G 98 OP2 ? ? ? 1_555 G MG . MG ? ? A G 98 A MG 206 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc9 metalc ? ? A C 99 OP2 ? ? ? 1_555 D MG . MG ? ? A C 99 A MG 203 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc10 metalc ? ? A U 100 O4 ? ? ? 1_555 D MG . MG ? ? A U 100 A MG 203 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc11 metalc ? ? A U 114 OP2 ? ? ? 1_555 L MG . MG ? ? A U 114 A MG 211 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc12 metalc ? ? A G 115 OP2 ? ? ? 1_555 L MG . MG ? ? A G 115 A MG 211 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc13 metalc ? ? A G 123 O6 ? ? ? 1_555 K MG . MG ? ? A G 123 A MG 210 1_555 ? ? ? ? ? ? ? 2.347 ? ? hydrog1 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 113 N1 ? ? A C 3 A G 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 113 O6 ? ? A C 3 A G 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 113 N2 ? ? A C 3 A G 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 4 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 4 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 4 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 110 N1 ? ? A U 6 A A 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 110 N6 ? ? A U 6 A A 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 109 N7 ? ? A G 7 A A 109 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? A G 7 N3 ? ? ? 1_555 A A 109 N6 ? ? A G 7 A A 109 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A A 8 N3 ? ? ? 1_555 A G 107 N2 ? ? A A 8 A G 107 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog15 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 10 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 10 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 10 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 22 N1 ? ? A U 11 A A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 22 N6 ? ? A U 11 A A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 21 N1 ? ? A C 12 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 21 O6 ? ? A C 12 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 21 N2 ? ? A C 12 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 13 A G 20 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog23 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 24 N1 ? ? ? 1_555 A U 108 N3 ? ? A A 24 A U 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 24 N6 ? ? ? 1_555 A U 108 O4 ? ? A A 24 A U 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 25 N3 ? ? ? 1_555 A G 107 N1 ? ? A C 25 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 107 O6 ? ? A C 25 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 25 O2 ? ? ? 1_555 A G 107 N2 ? ? A C 25 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 106 N3 ? ? A G 26 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 106 O2 ? ? A G 26 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 106 N4 ? ? A G 26 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 27 N1 ? ? ? 1_555 A U 105 O2 ? ? A G 27 A U 105 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog35 hydrog ? ? A G 27 O6 ? ? ? 1_555 A U 105 N3 ? ? A G 27 A U 105 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog36 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 28 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 28 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 28 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 29 N1 ? ? ? 1_555 A C 103 N3 ? ? A G 29 A C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 103 O2 ? ? A G 29 A C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 29 O6 ? ? ? 1_555 A C 103 N4 ? ? A G 29 A C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 30 N2 ? ? ? 1_555 A A 102 N7 ? ? A G 30 A A 102 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog43 hydrog ? ? A G 30 N3 ? ? ? 1_555 A A 102 N6 ? ? A G 30 A A 102 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog44 hydrog ? ? A C 33 N4 ? ? ? 1_555 A C 99 O2 ? ? A C 33 A C 99 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog45 hydrog ? ? A C 34 N3 ? ? ? 1_555 A G 98 N1 ? ? A C 34 A G 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 34 N4 ? ? ? 1_555 A G 98 O6 ? ? A C 34 A G 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 34 O2 ? ? ? 1_555 A G 98 N2 ? ? A C 34 A G 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 43 N1 ? ? ? 1_555 A C 96 N3 ? ? A G 43 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 43 N2 ? ? ? 1_555 A C 96 O2 ? ? A G 43 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 43 O6 ? ? ? 1_555 A C 96 N4 ? ? A G 43 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 44 N1 ? ? ? 1_555 A C 93 N3 ? ? A G 44 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 93 O2 ? ? A G 44 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 44 O6 ? ? ? 1_555 A C 93 N4 ? ? A G 44 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 96 N3 ? ? A G 44 A C 96 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog55 hydrog ? ? A G 44 N2 ? ? ? 1_555 A A 97 N1 ? ? A G 44 A A 97 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog56 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 92 N3 ? ? A G 45 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 92 O2 ? ? A G 45 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 92 N4 ? ? A G 45 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 46 N1 ? ? ? 1_555 A C 91 N3 ? ? A G 46 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 46 N2 ? ? ? 1_555 A C 91 O2 ? ? A G 46 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 46 O6 ? ? ? 1_555 A C 91 N4 ? ? A G 46 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A U 47 N3 ? ? ? 1_555 A A 90 N1 ? ? A U 47 A A 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A U 47 O4 ? ? ? 1_555 A A 90 N6 ? ? A U 47 A A 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 48 N2 ? ? ? 1_555 A A 89 N7 ? ? A G 48 A A 89 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog65 hydrog ? ? A G 48 N3 ? ? ? 1_555 A A 89 N6 ? ? A G 48 A A 89 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog66 hydrog ? ? A A 49 N3 ? ? ? 1_555 A G 68 N2 ? ? A A 49 A G 68 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog67 hydrog ? ? A U 51 N3 ? ? ? 1_555 A U 66 O2 ? ? A U 51 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog68 hydrog ? ? A U 51 O4 ? ? ? 1_555 A U 66 N3 ? ? A U 51 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog69 hydrog ? ? A C 52 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 52 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 52 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 52 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 52 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 53 N3 ? ? ? 1_555 A G 64 N1 ? ? A C 53 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 53 N4 ? ? ? 1_555 A G 64 O6 ? ? A C 53 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 53 O2 ? ? ? 1_555 A G 64 N2 ? ? A C 53 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 63 N1 ? ? A C 54 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 63 O6 ? ? A C 54 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 63 N2 ? ? A C 54 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A A 55 N1 ? ? ? 1_555 A U 62 N3 ? ? A A 55 A U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A A 55 N6 ? ? ? 1_555 A U 62 O4 ? ? A A 55 A U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 56 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 56 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 56 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 57 N2 ? ? ? 1_555 A A 60 N7 ? ? A G 57 A A 60 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog84 hydrog ? ? A A 67 N6 ? ? ? 1_555 A G 88 N3 ? ? A A 67 A G 88 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog85 hydrog ? ? A A 67 N7 ? ? ? 1_555 A G 88 N2 ? ? A A 67 A G 88 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog86 hydrog ? ? A G 68 N1 ? ? ? 1_555 A C 87 N3 ? ? A G 68 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 68 N2 ? ? ? 1_555 A C 87 O2 ? ? A G 68 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 68 O6 ? ? ? 1_555 A C 87 N4 ? ? A G 68 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 86 N3 ? ? A G 69 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 86 O2 ? ? A G 69 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 86 N4 ? ? A G 69 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A G 70 N1 ? ? ? 1_555 A C 85 N3 ? ? A G 70 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A G 70 N2 ? ? ? 1_555 A C 85 O2 ? ? A G 70 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A G 70 O6 ? ? ? 1_555 A C 85 N4 ? ? A G 70 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 71 N3 ? ? ? 1_555 A G 84 N1 ? ? A C 71 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 71 N4 ? ? ? 1_555 A G 84 O6 ? ? A C 71 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 71 O2 ? ? ? 1_555 A G 84 N2 ? ? A C 71 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A U 72 N3 ? ? ? 1_555 A G 83 O6 ? ? A U 72 A G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog99 hydrog ? ? A U 72 O2 ? ? ? 1_555 A G 83 N1 ? ? A U 72 A G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog100 hydrog ? ? A A 73 N6 ? ? ? 1_555 A U 114 O4 ? ? A A 73 A U 114 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog101 hydrog ? ? A A 73 N7 ? ? ? 1_555 A U 114 N3 ? ? A A 73 A U 114 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog102 hydrog ? ? A U 75 O2 ? ? ? 1_555 A C 76 N4 ? ? A U 75 A C 76 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog103 hydrog ? ? A C 76 N3 ? ? ? 1_555 A G 122 N1 ? ? A C 76 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 76 N4 ? ? ? 1_555 A G 122 O6 ? ? A C 76 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 76 O2 ? ? ? 1_555 A G 122 N2 ? ? A C 76 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A U 77 N3 ? ? ? 1_555 A A 121 N1 ? ? A U 77 A A 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A U 77 O4 ? ? ? 1_555 A A 121 N6 ? ? A U 77 A A 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A C 78 N3 ? ? ? 1_555 A G 120 N1 ? ? A C 78 A G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A C 78 N4 ? ? ? 1_555 A G 120 O6 ? ? A C 78 A G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 78 O2 ? ? ? 1_555 A G 120 N2 ? ? A C 78 A G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A U 79 N3 ? ? ? 1_555 A A 119 N1 ? ? A U 79 A A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A U 79 O4 ? ? ? 1_555 A A 119 N6 ? ? A U 79 A A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A U 80 N3 ? ? ? 1_555 A A 118 N1 ? ? A U 80 A A 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A U 80 O4 ? ? ? 1_555 A A 118 N6 ? ? A U 80 A A 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A U 81 N3 ? ? ? 1_555 A A 117 N1 ? ? A U 81 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A U 81 O4 ? ? ? 1_555 A A 117 N6 ? ? A U 81 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A C 82 N3 ? ? ? 1_555 A G 116 N1 ? ? A C 82 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A C 82 N4 ? ? ? 1_555 A G 116 O6 ? ? A C 82 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 82 O2 ? ? ? 1_555 A G 116 N2 ? ? A C 82 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A C 93 O2 ? ? ? 1_555 A C 96 N4 ? ? A C 93 A C 96 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog121 hydrog ? ? A C 93 O2 ? ? ? 1_555 A A 97 N6 ? ? A C 93 A A 97 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog122 hydrog ? ? A G 113 N2 ? ? ? 1_555 A U 114 O4 ? ? A G 113 A U 114 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2BA 201 ? 15 'BINDING SITE FOR RESIDUE 2BA A 201' AC2 Software A 2BA 202 ? 14 'BINDING SITE FOR RESIDUE 2BA A 202' AC3 Software A MG 203 ? 6 'BINDING SITE FOR RESIDUE MG A 203' AC4 Software A MG 204 ? 2 'BINDING SITE FOR RESIDUE MG A 204' AC5 Software A MG 206 ? 1 'BINDING SITE FOR RESIDUE MG A 206' AC6 Software A MG 207 ? 2 'BINDING SITE FOR RESIDUE MG A 207' AC7 Software A MG 210 ? 3 'BINDING SITE FOR RESIDUE MG A 210' AC8 Software A MG 211 ? 3 'BINDING SITE FOR RESIDUE MG A 211' AC9 Software A MG 213 ? 2 'BINDING SITE FOR RESIDUE MG A 213' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 G A 4 ? G A 4 . ? 1_555 ? 2 AC1 15 C A 5 ? C A 5 . ? 1_555 ? 3 AC1 15 U A 6 ? U A 6 . ? 1_555 ? 4 AC1 15 G A 7 ? G A 7 . ? 1_555 ? 5 AC1 15 A A 49 ? A A 49 . ? 1_555 ? 6 AC1 15 G A 69 ? G A 69 . ? 1_555 ? 7 AC1 15 G A 70 ? G A 70 . ? 1_555 ? 8 AC1 15 C A 71 ? C A 71 . ? 1_555 ? 9 AC1 15 U A 72 ? U A 72 . ? 1_555 ? 10 AC1 15 C A 86 ? C A 86 . ? 1_555 ? 11 AC1 15 C A 87 ? C A 87 . ? 1_555 ? 12 AC1 15 G A 111 ? G A 111 . ? 1_555 ? 13 AC1 15 C A 112 ? C A 112 . ? 1_555 ? 14 AC1 15 G A 113 ? G A 113 . ? 1_555 ? 15 AC1 15 U A 114 ? U A 114 . ? 1_555 ? 16 AC2 14 A A 8 ? A A 8 . ? 1_555 ? 17 AC2 14 G A 26 ? G A 26 . ? 1_555 ? 18 AC2 14 G A 27 ? G A 27 . ? 1_555 ? 19 AC2 14 G A 28 ? G A 28 . ? 1_555 ? 20 AC2 14 G A 29 ? G A 29 . ? 1_555 ? 21 AC2 14 G A 45 ? G A 45 . ? 1_555 ? 22 AC2 14 G A 46 ? G A 46 . ? 1_555 ? 23 AC2 14 U A 47 ? U A 47 . ? 1_555 ? 24 AC2 14 G A 48 ? G A 48 . ? 1_555 ? 25 AC2 14 C A 92 ? C A 92 . ? 1_555 ? 26 AC2 14 C A 93 ? C A 93 . ? 1_555 ? 27 AC2 14 A A 97 ? A A 97 . ? 1_555 ? 28 AC2 14 C A 106 ? C A 106 . ? 1_555 ? 29 AC2 14 G A 107 ? G A 107 . ? 1_555 ? 30 AC3 6 G A 29 ? G A 29 . ? 1_555 ? 31 AC3 6 G A 30 ? G A 30 . ? 1_555 ? 32 AC3 6 A A 97 ? A A 97 . ? 1_555 ? 33 AC3 6 G A 98 ? G A 98 . ? 1_555 ? 34 AC3 6 C A 99 ? C A 99 . ? 1_555 ? 35 AC3 6 U A 100 ? U A 100 . ? 1_555 ? 36 AC4 2 G A 28 ? G A 28 . ? 1_555 ? 37 AC4 2 U A 47 ? U A 47 . ? 1_555 ? 38 AC5 1 G A 98 ? G A 98 . ? 1_555 ? 39 AC6 2 U A 6 ? U A 6 . ? 1_555 ? 40 AC6 2 C A 71 ? C A 71 . ? 1_555 ? 41 AC7 3 G A 113 ? G A 113 . ? 9_555 ? 42 AC7 3 G A 122 ? G A 122 . ? 1_555 ? 43 AC7 3 G A 123 ? G A 123 . ? 1_555 ? 44 AC8 3 G A 74 ? G A 74 . ? 5_555 ? 45 AC8 3 U A 114 ? U A 114 . ? 1_555 ? 46 AC8 3 G A 115 ? G A 115 . ? 1_555 ? 47 AC9 2 A A 35 ? A A 35 . ? 1_555 ? 48 AC9 2 A A 36 ? A A 36 . ? 1_555 ? # _database_PDB_matrix.entry_id 4QK9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4QK9 _atom_sites.fract_transf_matrix[1][1] 0.009069 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009069 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009069 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 ? ? ? A . n A 1 2 G 2 2 ? ? ? A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 A 9 9 9 A A A . n A 1 10 U 10 10 10 U U A . n A 1 11 U 11 11 11 U U A . n A 1 12 C 12 12 12 C C A . n A 1 13 C 13 13 13 C C A . n A 1 14 C 14 14 14 C C A . n A 1 15 U 15 15 15 U U A . n A 1 16 G 16 16 16 G G A . n A 1 17 A 17 17 17 A A A . n A 1 18 A 18 18 18 A A A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 G 21 21 21 G G A . n A 1 22 A 22 22 22 A A A . n A 1 23 A 23 23 23 A A A . n A 1 24 A 24 24 24 A A A . n A 1 25 C 25 25 25 C C A . n A 1 26 G 26 26 26 G G A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 G 29 29 29 G G A . n A 1 30 G 30 30 30 G G A . n A 1 31 A 31 31 31 A A A . n A 1 32 C 32 32 32 C C A . n A 1 33 C 33 33 33 C C A . n A 1 34 C 34 34 34 C C A . n A 1 35 A 35 35 35 A A A . n A 1 36 A 36 36 36 A A A . n A 1 37 U 37 37 37 U U A . n A 1 38 C 38 38 ? ? ? A . n A 1 39 U 39 39 ? ? ? A . n A 1 40 U 40 40 ? ? ? A . n A 1 41 C 41 41 ? ? ? A . n A 1 42 A 42 42 ? ? ? A . n A 1 43 G 43 43 43 G G A . n A 1 44 G 44 44 44 G G A . n A 1 45 G 45 45 45 G G A . n A 1 46 G 46 46 46 G G A . n A 1 47 U 47 47 47 U U A . n A 1 48 G 48 48 48 G G A . n A 1 49 A 49 49 49 A A A . n A 1 50 A 50 50 50 A A A . n A 1 51 U 51 51 51 U U A . n A 1 52 C 52 52 52 C C A . n A 1 53 C 53 53 53 C C A . n A 1 54 C 54 54 54 C C A . n A 1 55 A 55 55 55 A A A . n A 1 56 C 56 56 56 C C A . n A 1 57 G 57 57 57 G G A . n A 1 58 U 58 58 58 U U A . n A 1 59 A 59 59 59 A A A . n A 1 60 A 60 60 60 A A A . n A 1 61 G 61 61 61 G G A . n A 1 62 U 62 62 62 U U A . n A 1 63 G 63 63 63 G G A . n A 1 64 G 64 64 64 G G A . n A 1 65 G 65 65 65 G G A . n A 1 66 U 66 66 66 U U A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 G 70 70 70 G G A . n A 1 71 C 71 71 71 C C A . n A 1 72 U 72 72 72 U U A . n A 1 73 A 73 73 73 A A A . n A 1 74 G 74 74 74 G G A . n A 1 75 U 75 75 75 U U A . n A 1 76 C 76 76 76 C C A . n A 1 77 U 77 77 77 U U A . n A 1 78 C 78 78 78 C C A . n A 1 79 U 79 79 79 U U A . n A 1 80 U 80 80 80 U U A . n A 1 81 U 81 81 81 U U A . n A 1 82 C 82 82 82 C C A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 C 85 85 85 C C A . n A 1 86 C 86 86 86 C C A . n A 1 87 C 87 87 87 C C A . n A 1 88 G 88 88 88 G G A . n A 1 89 A 89 89 89 A A A . n A 1 90 A 90 90 90 A A A . n A 1 91 C 91 91 91 C C A . n A 1 92 C 92 92 92 C C A . n A 1 93 C 93 93 93 C C A . n A 1 94 G 94 94 94 G G A . n A 1 95 U 95 95 95 U U A . n A 1 96 C 96 96 96 C C A . n A 1 97 A 97 97 97 A A A . n A 1 98 G 98 98 98 G G A . n A 1 99 C 99 99 99 C C A . n A 1 100 U 100 100 100 U U A . n A 1 101 A 101 101 101 A A A . n A 1 102 A 102 102 102 A A A . n A 1 103 C 103 103 103 C C A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 C 106 106 106 C C A . n A 1 107 G 107 107 107 G G A . n A 1 108 U 108 108 108 U U A . n A 1 109 A 109 109 109 A A A . n A 1 110 A 110 110 110 A A A . n A 1 111 G 111 111 111 G G A . n A 1 112 C 112 112 112 C C A . n A 1 113 G 113 113 113 G G A . n A 1 114 U 114 114 114 U U A . n A 1 115 G 115 115 115 G G A . n A 1 116 G 116 116 116 G G A . n A 1 117 A 117 117 117 A A A . n A 1 118 A 118 118 118 A A A . n A 1 119 A 119 119 119 A A A . n A 1 120 G 120 120 120 G G A . n A 1 121 A 121 121 121 A A A . n A 1 122 G 122 122 122 G G A . n A 1 123 G 123 123 123 G G A . n A 1 124 23G 124 124 124 23G 23G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2BA 1 201 201 2BA 2BA A . C 2 2BA 1 202 202 2BA 2BA A . D 3 MG 1 203 300 MG MG A . E 3 MG 1 204 301 MG MG A . F 3 MG 1 205 304 MG MG A . G 3 MG 1 206 305 MG MG A . H 3 MG 1 207 306 MG MG A . I 3 MG 1 208 307 MG MG A . J 3 MG 1 209 308 MG MG A . K 3 MG 1 210 309 MG MG A . L 3 MG 1 211 310 MG MG A . M 3 MG 1 212 311 MG MG A . N 3 MG 1 213 312 MG MG A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 23G _pdbx_struct_mod_residue.label_seq_id 124 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id 23G _pdbx_struct_mod_residue.auth_seq_id 124 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id G _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A U 6 ? A U 6 ? 1_555 MG ? H MG . ? A MG 207 ? 1_555 OP1 ? A C 71 ? A C 71 ? 1_555 83.3 ? 2 OP1 ? A G 28 ? A G 28 ? 1_555 MG ? E MG . ? A MG 204 ? 1_555 OP1 ? A U 47 ? A U 47 ? 1_555 73.0 ? 3 OP2 ? A G 30 ? A G 30 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP1 ? A G 98 ? A G 98 ? 1_555 82.1 ? 4 OP2 ? A G 30 ? A G 30 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP2 ? A C 99 ? A C 99 ? 1_555 155.8 ? 5 OP1 ? A G 98 ? A G 98 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP2 ? A C 99 ? A C 99 ? 1_555 80.6 ? 6 OP2 ? A G 30 ? A G 30 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 100 ? A U 100 ? 1_555 81.6 ? 7 OP1 ? A G 98 ? A G 98 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 100 ? A U 100 ? 1_555 73.8 ? 8 OP2 ? A C 99 ? A C 99 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 100 ? A U 100 ? 1_555 77.4 ? 9 OP2 ? A U 114 ? A U 114 ? 1_555 MG ? L MG . ? A MG 211 ? 1_555 OP2 ? A G 115 ? A G 115 ? 1_555 83.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-06 2 'Structure model' 1 1 2014-08-27 3 'Structure model' 1 2 2014-09-10 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' entity 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' pdbx_initial_refinement_model 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.value' 19 4 'Structure model' '_struct_conn.pdbx_dist_value' 20 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.3_1479)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GTP 1 ? A GTP 1 2 1 Y 1 A G 2 ? A G 2 3 1 Y 1 A C 38 ? A C 38 4 1 Y 1 A U 39 ? A U 39 5 1 Y 1 A U 40 ? A U 40 6 1 Y 1 A C 41 ? A C 41 7 1 Y 1 A A 42 ? A A 42 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 23G P P N N 1 23G N1 N N N 2 23G C2 C N N 3 23G N2 N N N 4 23G N3 N N N 5 23G C4 C Y N 6 23G C5 C Y N 7 23G C6 C N N 8 23G O6 O N N 9 23G N7 N Y N 10 23G C8 C Y N 11 23G N9 N Y N 12 23G PC P N N 13 23G "C1'" C N R 14 23G "C2'" C N R 15 23G "O2'" O N N 16 23G "C3'" C N R 17 23G "O3'" O N N 18 23G "C4'" C N R 19 23G "O4'" O N N 20 23G "C5'" C N N 21 23G "O5'" O N N 22 23G OC1 O N N 23 23G OC2 O N N 24 23G OP1 O N N 25 23G OP2 O N N 26 23G HN1 H N N 27 23G HN2 H N N 28 23G HN2A H N N 29 23G H8 H N N 30 23G "H1'" H N N 31 23G "H2'" H N N 32 23G "H3'" H N N 33 23G "H4'" H N N 34 23G "H5'" H N N 35 23G "H5'A" H N N 36 23G OP3 O N N 37 23G H11 H N N 38 23G HOP2 H N N 39 23G HOP3 H N N 40 2BA P P N R 41 2BA O1P O N N 42 2BA O2P O N N 43 2BA "O5'" O N N 44 2BA "C5'" C N N 45 2BA "C4'" C N R 46 2BA "O4'" O N N 47 2BA "C3'" C N S 48 2BA "O3'" O N N 49 2BA "C2'" C N R 50 2BA "O2'" O N N 51 2BA "C1'" C N R 52 2BA N9 N Y N 53 2BA C8 C Y N 54 2BA N7 N Y N 55 2BA C5 C Y N 56 2BA C6 C Y N 57 2BA N6 N N N 58 2BA N1 N Y N 59 2BA C2 C Y N 60 2BA N3 N Y N 61 2BA C4 C Y N 62 2BA P1 P N R 63 2BA O1P1 O N N 64 2BA O2P1 O N N 65 2BA "O5'1" O N N 66 2BA "C5'1" C N N 67 2BA "C4'1" C N R 68 2BA "O4'1" O N N 69 2BA "C3'1" C N S 70 2BA "O3'1" O N N 71 2BA "C2'1" C N R 72 2BA "O2'1" O N N 73 2BA "C1'1" C N R 74 2BA N91 N Y N 75 2BA C81 C Y N 76 2BA N71 N Y N 77 2BA C51 C Y N 78 2BA C61 C Y N 79 2BA N61 N N N 80 2BA N11 N Y N 81 2BA C21 C Y N 82 2BA N31 N Y N 83 2BA C41 C Y N 84 2BA "H5'" H N N 85 2BA "H5'A" H N N 86 2BA "H4'" H N N 87 2BA "H3'" H N N 88 2BA "H2'" H N N 89 2BA "HO2'" H N N 90 2BA "H1'" H N N 91 2BA H8 H N N 92 2BA HN6 H N N 93 2BA HN6A H N N 94 2BA H2 H N N 95 2BA "HC5'" H N N 96 2BA HC5A H N N 97 2BA "HC4'" H N N 98 2BA "HC3'" H N N 99 2BA "HC2'" H N N 100 2BA HO2A H N N 101 2BA "HC1'" H N N 102 2BA HC8 H N N 103 2BA H1N6 H N N 104 2BA H1NA H N N 105 2BA HC2 H N N 106 2BA H2P H N N 107 2BA H2OP H N N 108 A OP3 O N N 109 A P P N N 110 A OP1 O N N 111 A OP2 O N N 112 A "O5'" O N N 113 A "C5'" C N N 114 A "C4'" C N R 115 A "O4'" O N N 116 A "C3'" C N S 117 A "O3'" O N N 118 A "C2'" C N R 119 A "O2'" O N N 120 A "C1'" C N R 121 A N9 N Y N 122 A C8 C Y N 123 A N7 N Y N 124 A C5 C Y N 125 A C6 C Y N 126 A N6 N N N 127 A N1 N Y N 128 A C2 C Y N 129 A N3 N Y N 130 A C4 C Y N 131 A HOP3 H N N 132 A HOP2 H N N 133 A "H5'" H N N 134 A "H5''" H N N 135 A "H4'" H N N 136 A "H3'" H N N 137 A "HO3'" H N N 138 A "H2'" H N N 139 A "HO2'" H N N 140 A "H1'" H N N 141 A H8 H N N 142 A H61 H N N 143 A H62 H N N 144 A H2 H N N 145 C OP3 O N N 146 C P P N N 147 C OP1 O N N 148 C OP2 O N N 149 C "O5'" O N N 150 C "C5'" C N N 151 C "C4'" C N R 152 C "O4'" O N N 153 C "C3'" C N S 154 C "O3'" O N N 155 C "C2'" C N R 156 C "O2'" O N N 157 C "C1'" C N R 158 C N1 N N N 159 C C2 C N N 160 C O2 O N N 161 C N3 N N N 162 C C4 C N N 163 C N4 N N N 164 C C5 C N N 165 C C6 C N N 166 C HOP3 H N N 167 C HOP2 H N N 168 C "H5'" H N N 169 C "H5''" H N N 170 C "H4'" H N N 171 C "H3'" H N N 172 C "HO3'" H N N 173 C "H2'" H N N 174 C "HO2'" H N N 175 C "H1'" H N N 176 C H41 H N N 177 C H42 H N N 178 C H5 H N N 179 C H6 H N N 180 G OP3 O N N 181 G P P N N 182 G OP1 O N N 183 G OP2 O N N 184 G "O5'" O N N 185 G "C5'" C N N 186 G "C4'" C N R 187 G "O4'" O N N 188 G "C3'" C N S 189 G "O3'" O N N 190 G "C2'" C N R 191 G "O2'" O N N 192 G "C1'" C N R 193 G N9 N Y N 194 G C8 C Y N 195 G N7 N Y N 196 G C5 C Y N 197 G C6 C N N 198 G O6 O N N 199 G N1 N N N 200 G C2 C N N 201 G N2 N N N 202 G N3 N N N 203 G C4 C Y N 204 G HOP3 H N N 205 G HOP2 H N N 206 G "H5'" H N N 207 G "H5''" H N N 208 G "H4'" H N N 209 G "H3'" H N N 210 G "HO3'" H N N 211 G "H2'" H N N 212 G "HO2'" H N N 213 G "H1'" H N N 214 G H8 H N N 215 G H1 H N N 216 G H21 H N N 217 G H22 H N N 218 GTP PG P N N 219 GTP O1G O N N 220 GTP O2G O N N 221 GTP O3G O N N 222 GTP O3B O N N 223 GTP PB P N N 224 GTP O1B O N N 225 GTP O2B O N N 226 GTP O3A O N N 227 GTP PA P N N 228 GTP O1A O N N 229 GTP O2A O N N 230 GTP "O5'" O N N 231 GTP "C5'" C N N 232 GTP "C4'" C N R 233 GTP "O4'" O N N 234 GTP "C3'" C N S 235 GTP "O3'" O N N 236 GTP "C2'" C N R 237 GTP "O2'" O N N 238 GTP "C1'" C N R 239 GTP N9 N Y N 240 GTP C8 C Y N 241 GTP N7 N Y N 242 GTP C5 C Y N 243 GTP C6 C N N 244 GTP O6 O N N 245 GTP N1 N N N 246 GTP C2 C N N 247 GTP N2 N N N 248 GTP N3 N N N 249 GTP C4 C Y N 250 GTP HOG2 H N N 251 GTP HOG3 H N N 252 GTP HOB2 H N N 253 GTP HOA2 H N N 254 GTP "H5'" H N N 255 GTP "H5''" H N N 256 GTP "H4'" H N N 257 GTP "H3'" H N N 258 GTP "HO3'" H N N 259 GTP "H2'" H N N 260 GTP "HO2'" H N N 261 GTP "H1'" H N N 262 GTP H8 H N N 263 GTP HN1 H N N 264 GTP HN21 H N N 265 GTP HN22 H N N 266 MG MG MG N N 267 U OP3 O N N 268 U P P N N 269 U OP1 O N N 270 U OP2 O N N 271 U "O5'" O N N 272 U "C5'" C N N 273 U "C4'" C N R 274 U "O4'" O N N 275 U "C3'" C N S 276 U "O3'" O N N 277 U "C2'" C N R 278 U "O2'" O N N 279 U "C1'" C N R 280 U N1 N N N 281 U C2 C N N 282 U O2 O N N 283 U N3 N N N 284 U C4 C N N 285 U O4 O N N 286 U C5 C N N 287 U C6 C N N 288 U HOP3 H N N 289 U HOP2 H N N 290 U "H5'" H N N 291 U "H5''" H N N 292 U "H4'" H N N 293 U "H3'" H N N 294 U "HO3'" H N N 295 U "H2'" H N N 296 U "HO2'" H N N 297 U "H1'" H N N 298 U H3 H N N 299 U H5 H N N 300 U H6 H N N 301 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 23G P "O5'" sing N N 1 23G P OP1 doub N N 2 23G P OP2 sing N N 3 23G N1 C2 sing N N 4 23G N1 C6 sing N N 5 23G N1 HN1 sing N N 6 23G C2 N2 sing N N 7 23G C2 N3 doub N N 8 23G N2 HN2 sing N N 9 23G N2 HN2A sing N N 10 23G N3 C4 sing N N 11 23G C4 C5 doub Y N 12 23G C4 N9 sing Y N 13 23G C5 C6 sing N N 14 23G C5 N7 sing Y N 15 23G C6 O6 doub N N 16 23G N7 C8 doub Y N 17 23G C8 N9 sing Y N 18 23G C8 H8 sing N N 19 23G N9 "C1'" sing N N 20 23G PC "O2'" sing N N 21 23G PC "O3'" sing N N 22 23G PC OC1 sing N N 23 23G PC OC2 doub N N 24 23G "C1'" "C2'" sing N N 25 23G "C1'" "O4'" sing N N 26 23G "C1'" "H1'" sing N N 27 23G "C2'" "O2'" sing N N 28 23G "C2'" "C3'" sing N N 29 23G "C2'" "H2'" sing N N 30 23G "C3'" "O3'" sing N N 31 23G "C3'" "C4'" sing N N 32 23G "C3'" "H3'" sing N N 33 23G "C4'" "O4'" sing N N 34 23G "C4'" "C5'" sing N N 35 23G "C4'" "H4'" sing N N 36 23G "C5'" "O5'" sing N N 37 23G "C5'" "H5'" sing N N 38 23G "C5'" "H5'A" sing N N 39 23G P OP3 sing N N 40 23G OC1 H11 sing N N 41 23G OP2 HOP2 sing N N 42 23G OP3 HOP3 sing N N 43 2BA P O1P doub N N 44 2BA P O2P sing N N 45 2BA P "O5'" sing N N 46 2BA P "O3'1" sing N N 47 2BA "O5'" "C5'" sing N N 48 2BA "C5'" "C4'" sing N N 49 2BA "C4'" "O4'" sing N N 50 2BA "C4'" "C3'" sing N N 51 2BA "O4'" "C1'" sing N N 52 2BA "C3'" "O3'" sing N N 53 2BA "C3'" "C2'" sing N N 54 2BA "O3'" P1 sing N N 55 2BA "C2'" "O2'" sing N N 56 2BA "C2'" "C1'" sing N N 57 2BA "C1'" N9 sing N N 58 2BA N9 C8 sing Y N 59 2BA N9 C4 sing Y N 60 2BA C8 N7 doub Y N 61 2BA N7 C5 sing Y N 62 2BA C5 C6 doub Y N 63 2BA C5 C4 sing Y N 64 2BA C6 N6 sing N N 65 2BA C6 N1 sing Y N 66 2BA N1 C2 doub Y N 67 2BA C2 N3 sing Y N 68 2BA N3 C4 doub Y N 69 2BA P1 O1P1 doub N N 70 2BA P1 O2P1 sing N N 71 2BA P1 "O5'1" sing N N 72 2BA "O5'1" "C5'1" sing N N 73 2BA "C5'1" "C4'1" sing N N 74 2BA "C4'1" "O4'1" sing N N 75 2BA "C4'1" "C3'1" sing N N 76 2BA "O4'1" "C1'1" sing N N 77 2BA "C3'1" "O3'1" sing N N 78 2BA "C3'1" "C2'1" sing N N 79 2BA "C2'1" "O2'1" sing N N 80 2BA "C2'1" "C1'1" sing N N 81 2BA "C1'1" N91 sing N N 82 2BA N91 C81 sing Y N 83 2BA N91 C41 sing Y N 84 2BA C81 N71 doub Y N 85 2BA N71 C51 sing Y N 86 2BA C51 C61 doub Y N 87 2BA C51 C41 sing Y N 88 2BA C61 N61 sing N N 89 2BA C61 N11 sing Y N 90 2BA N11 C21 doub Y N 91 2BA C21 N31 sing Y N 92 2BA N31 C41 doub Y N 93 2BA "C5'" "H5'" sing N N 94 2BA "C5'" "H5'A" sing N N 95 2BA "C4'" "H4'" sing N N 96 2BA "C3'" "H3'" sing N N 97 2BA "C2'" "H2'" sing N N 98 2BA "O2'" "HO2'" sing N N 99 2BA "C1'" "H1'" sing N N 100 2BA C8 H8 sing N N 101 2BA N6 HN6 sing N N 102 2BA N6 HN6A sing N N 103 2BA C2 H2 sing N N 104 2BA "C5'1" "HC5'" sing N N 105 2BA "C5'1" HC5A sing N N 106 2BA "C4'1" "HC4'" sing N N 107 2BA "C3'1" "HC3'" sing N N 108 2BA "C2'1" "HC2'" sing N N 109 2BA "O2'1" HO2A sing N N 110 2BA "C1'1" "HC1'" sing N N 111 2BA C81 HC8 sing N N 112 2BA N61 H1N6 sing N N 113 2BA N61 H1NA sing N N 114 2BA C21 HC2 sing N N 115 2BA O2P H2P sing N N 116 2BA O2P1 H2OP sing N N 117 A OP3 P sing N N 118 A OP3 HOP3 sing N N 119 A P OP1 doub N N 120 A P OP2 sing N N 121 A P "O5'" sing N N 122 A OP2 HOP2 sing N N 123 A "O5'" "C5'" sing N N 124 A "C5'" "C4'" sing N N 125 A "C5'" "H5'" sing N N 126 A "C5'" "H5''" sing N N 127 A "C4'" "O4'" sing N N 128 A "C4'" "C3'" sing N N 129 A "C4'" "H4'" sing N N 130 A "O4'" "C1'" sing N N 131 A "C3'" "O3'" sing N N 132 A "C3'" "C2'" sing N N 133 A "C3'" "H3'" sing N N 134 A "O3'" "HO3'" sing N N 135 A "C2'" "O2'" sing N N 136 A "C2'" "C1'" sing N N 137 A "C2'" "H2'" sing N N 138 A "O2'" "HO2'" sing N N 139 A "C1'" N9 sing N N 140 A "C1'" "H1'" sing N N 141 A N9 C8 sing Y N 142 A N9 C4 sing Y N 143 A C8 N7 doub Y N 144 A C8 H8 sing N N 145 A N7 C5 sing Y N 146 A C5 C6 sing Y N 147 A C5 C4 doub Y N 148 A C6 N6 sing N N 149 A C6 N1 doub Y N 150 A N6 H61 sing N N 151 A N6 H62 sing N N 152 A N1 C2 sing Y N 153 A C2 N3 doub Y N 154 A C2 H2 sing N N 155 A N3 C4 sing Y N 156 C OP3 P sing N N 157 C OP3 HOP3 sing N N 158 C P OP1 doub N N 159 C P OP2 sing N N 160 C P "O5'" sing N N 161 C OP2 HOP2 sing N N 162 C "O5'" "C5'" sing N N 163 C "C5'" "C4'" sing N N 164 C "C5'" "H5'" sing N N 165 C "C5'" "H5''" sing N N 166 C "C4'" "O4'" sing N N 167 C "C4'" "C3'" sing N N 168 C "C4'" "H4'" sing N N 169 C "O4'" "C1'" sing N N 170 C "C3'" "O3'" sing N N 171 C "C3'" "C2'" sing N N 172 C "C3'" "H3'" sing N N 173 C "O3'" "HO3'" sing N N 174 C "C2'" "O2'" sing N N 175 C "C2'" "C1'" sing N N 176 C "C2'" "H2'" sing N N 177 C "O2'" "HO2'" sing N N 178 C "C1'" N1 sing N N 179 C "C1'" "H1'" sing N N 180 C N1 C2 sing N N 181 C N1 C6 sing N N 182 C C2 O2 doub N N 183 C C2 N3 sing N N 184 C N3 C4 doub N N 185 C C4 N4 sing N N 186 C C4 C5 sing N N 187 C N4 H41 sing N N 188 C N4 H42 sing N N 189 C C5 C6 doub N N 190 C C5 H5 sing N N 191 C C6 H6 sing N N 192 G OP3 P sing N N 193 G OP3 HOP3 sing N N 194 G P OP1 doub N N 195 G P OP2 sing N N 196 G P "O5'" sing N N 197 G OP2 HOP2 sing N N 198 G "O5'" "C5'" sing N N 199 G "C5'" "C4'" sing N N 200 G "C5'" "H5'" sing N N 201 G "C5'" "H5''" sing N N 202 G "C4'" "O4'" sing N N 203 G "C4'" "C3'" sing N N 204 G "C4'" "H4'" sing N N 205 G "O4'" "C1'" sing N N 206 G "C3'" "O3'" sing N N 207 G "C3'" "C2'" sing N N 208 G "C3'" "H3'" sing N N 209 G "O3'" "HO3'" sing N N 210 G "C2'" "O2'" sing N N 211 G "C2'" "C1'" sing N N 212 G "C2'" "H2'" sing N N 213 G "O2'" "HO2'" sing N N 214 G "C1'" N9 sing N N 215 G "C1'" "H1'" sing N N 216 G N9 C8 sing Y N 217 G N9 C4 sing Y N 218 G C8 N7 doub Y N 219 G C8 H8 sing N N 220 G N7 C5 sing Y N 221 G C5 C6 sing N N 222 G C5 C4 doub Y N 223 G C6 O6 doub N N 224 G C6 N1 sing N N 225 G N1 C2 sing N N 226 G N1 H1 sing N N 227 G C2 N2 sing N N 228 G C2 N3 doub N N 229 G N2 H21 sing N N 230 G N2 H22 sing N N 231 G N3 C4 sing N N 232 GTP PG O1G doub N N 233 GTP PG O2G sing N N 234 GTP PG O3G sing N N 235 GTP PG O3B sing N N 236 GTP O2G HOG2 sing N N 237 GTP O3G HOG3 sing N N 238 GTP O3B PB sing N N 239 GTP PB O1B doub N N 240 GTP PB O2B sing N N 241 GTP PB O3A sing N N 242 GTP O2B HOB2 sing N N 243 GTP O3A PA sing N N 244 GTP PA O1A doub N N 245 GTP PA O2A sing N N 246 GTP PA "O5'" sing N N 247 GTP O2A HOA2 sing N N 248 GTP "O5'" "C5'" sing N N 249 GTP "C5'" "C4'" sing N N 250 GTP "C5'" "H5'" sing N N 251 GTP "C5'" "H5''" sing N N 252 GTP "C4'" "O4'" sing N N 253 GTP "C4'" "C3'" sing N N 254 GTP "C4'" "H4'" sing N N 255 GTP "O4'" "C1'" sing N N 256 GTP "C3'" "O3'" sing N N 257 GTP "C3'" "C2'" sing N N 258 GTP "C3'" "H3'" sing N N 259 GTP "O3'" "HO3'" sing N N 260 GTP "C2'" "O2'" sing N N 261 GTP "C2'" "C1'" sing N N 262 GTP "C2'" "H2'" sing N N 263 GTP "O2'" "HO2'" sing N N 264 GTP "C1'" N9 sing N N 265 GTP "C1'" "H1'" sing N N 266 GTP N9 C8 sing Y N 267 GTP N9 C4 sing Y N 268 GTP C8 N7 doub Y N 269 GTP C8 H8 sing N N 270 GTP N7 C5 sing Y N 271 GTP C5 C6 sing N N 272 GTP C5 C4 doub Y N 273 GTP C6 O6 doub N N 274 GTP C6 N1 sing N N 275 GTP N1 C2 sing N N 276 GTP N1 HN1 sing N N 277 GTP C2 N2 sing N N 278 GTP C2 N3 doub N N 279 GTP N2 HN21 sing N N 280 GTP N2 HN22 sing N N 281 GTP N3 C4 sing N N 282 U OP3 P sing N N 283 U OP3 HOP3 sing N N 284 U P OP1 doub N N 285 U P OP2 sing N N 286 U P "O5'" sing N N 287 U OP2 HOP2 sing N N 288 U "O5'" "C5'" sing N N 289 U "C5'" "C4'" sing N N 290 U "C5'" "H5'" sing N N 291 U "C5'" "H5''" sing N N 292 U "C4'" "O4'" sing N N 293 U "C4'" "C3'" sing N N 294 U "C4'" "H4'" sing N N 295 U "O4'" "C1'" sing N N 296 U "C3'" "O3'" sing N N 297 U "C3'" "C2'" sing N N 298 U "C3'" "H3'" sing N N 299 U "O3'" "HO3'" sing N N 300 U "C2'" "O2'" sing N N 301 U "C2'" "C1'" sing N N 302 U "C2'" "H2'" sing N N 303 U "O2'" "HO2'" sing N N 304 U "C1'" N1 sing N N 305 U "C1'" "H1'" sing N N 306 U N1 C2 sing N N 307 U N1 C6 sing N N 308 U C2 O2 doub N N 309 U C2 N3 sing N N 310 U N3 C4 sing N N 311 U N3 H3 sing N N 312 U C4 O4 doub N N 313 U C4 C5 sing N N 314 U C5 C6 doub N N 315 U C5 H5 sing N N 316 U C6 H6 sing N N 317 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4QK9 'double helix' 4QK9 'a-form double helix' 4QK9 'hairpin loop' 4QK9 tetraloop 4QK9 'mismatched base pair' 4QK9 'internal loop' 4QK9 'triple helix' 4QK9 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 3 1_555 A G 113 1_555 0.226 -0.216 0.109 -5.000 -6.986 -4.364 1 A_C3:G113_A A 3 ? A 113 ? 19 1 1 A G 4 1_555 A C 112 1_555 -0.440 -0.225 -0.218 -2.085 -13.333 -0.570 2 A_G4:C112_A A 4 ? A 112 ? 19 1 1 A C 5 1_555 A G 111 1_555 0.201 -0.161 -0.370 4.001 -12.807 1.716 3 A_C5:G111_A A 5 ? A 111 ? 19 1 1 A U 6 1_555 A A 110 1_555 0.210 -0.201 0.465 9.065 11.993 1.635 4 A_U6:A110_A A 6 ? A 110 ? 20 1 1 A G 7 1_555 A A 109 1_555 6.614 -4.323 0.739 28.910 9.554 -1.457 5 A_G7:A109_A A 7 ? A 109 ? 11 9 1 A G 19 1_555 A C 14 1_555 0.329 0.276 -0.154 0.811 1.047 3.157 6 A_G19:C14_A A 19 ? A 14 ? 19 1 1 A G 20 1_555 A C 13 1_555 -0.109 0.218 0.308 -2.231 -9.479 12.820 7 A_G20:C13_A A 20 ? A 13 ? ? 1 1 A G 21 1_555 A C 12 1_555 -0.447 -0.112 -0.141 -9.586 -8.239 2.760 8 A_G21:C12_A A 21 ? A 12 ? 19 1 1 A A 22 1_555 A U 11 1_555 -0.128 -0.028 0.013 -4.614 -7.807 -0.336 9 A_A22:U11_A A 22 ? A 11 ? 20 1 1 A A 23 1_555 A U 10 1_555 0.167 -0.172 0.017 6.275 -8.056 4.755 10 A_A23:U10_A A 23 ? A 10 ? 20 1 1 A A 24 1_555 A U 108 1_555 0.185 -0.076 -0.247 -14.248 -5.147 -5.860 11 A_A24:U108_A A 24 ? A 108 ? 20 1 1 A C 25 1_555 A G 107 1_555 0.483 -0.213 -0.020 5.807 -14.270 -0.127 12 A_C25:G107_A A 25 ? A 107 ? 19 1 1 A G 26 1_555 A C 106 1_555 0.309 -0.132 -0.154 -5.666 -9.683 0.966 13 A_G26:C106_A A 26 ? A 106 ? 19 1 1 A G 27 1_555 A U 105 1_555 -2.697 -0.724 0.277 -0.603 -7.165 1.146 14 A_G27:U105_A A 27 ? A 105 ? 28 1 1 A G 28 1_555 A C 104 1_555 -0.082 -0.207 0.048 0.325 -4.582 -1.501 15 A_G28:C104_A A 28 ? A 104 ? 19 1 1 A G 29 1_555 A C 103 1_555 0.307 -0.187 -0.019 -7.108 -12.098 -2.854 16 A_G29:C103_A A 29 ? A 103 ? 19 1 1 A G 30 1_555 A A 102 1_555 6.826 -4.378 0.349 -8.993 -10.637 -8.191 17 A_G30:A102_A A 30 ? A 102 ? 11 10 1 A C 33 1_555 A C 99 1_555 -3.866 -1.786 0.533 15.884 -12.925 -1.828 18 A_C33:C99_A A 33 ? A 99 ? ? 1 1 A C 34 1_555 A G 98 1_555 0.600 -0.311 0.161 3.986 -14.742 1.853 19 A_C34:G98_A A 34 ? A 98 ? 19 1 1 A G 43 1_555 A C 96 1_555 -0.565 -0.438 -0.714 -14.734 -8.503 -5.423 20 A_G43:C96_A A 43 ? A 96 ? 19 1 1 A G 44 1_555 A C 93 1_555 0.155 -0.194 0.192 -4.211 3.425 -2.052 21 A_G44:C93_A A 44 ? A 93 ? 19 1 1 A G 45 1_555 A C 92 1_555 -0.451 -0.100 0.058 -2.759 -7.774 3.060 22 A_G45:C92_A A 45 ? A 92 ? 19 1 1 A G 46 1_555 A C 91 1_555 -0.402 -0.279 -0.118 0.197 -0.344 -0.983 23 A_G46:C91_A A 46 ? A 91 ? 19 1 1 A U 47 1_555 A A 90 1_555 -0.385 -0.039 0.058 10.269 10.725 -1.086 24 A_U47:A90_A A 47 ? A 90 ? 20 1 1 A G 48 1_555 A A 89 1_555 6.641 -4.017 0.898 29.638 7.157 2.710 25 A_G48:A89_A A 48 ? A 89 ? 11 9 1 A A 60 1_555 A G 57 1_555 -7.687 -5.309 0.738 -10.328 -9.349 -42.311 26 A_A60:G57_A A 60 ? A 57 ? ? ? 1 A G 61 1_555 A C 56 1_555 -0.198 -0.080 -0.242 -12.255 -1.451 0.373 27 A_G61:C56_A A 61 ? A 56 ? 19 1 1 A U 62 1_555 A A 55 1_555 -0.122 -0.055 0.045 -6.114 -6.667 -2.017 28 A_U62:A55_A A 62 ? A 55 ? 20 1 1 A G 63 1_555 A C 54 1_555 -0.302 -0.190 0.061 -5.539 -8.477 1.533 29 A_G63:C54_A A 63 ? A 54 ? 19 1 1 A G 64 1_555 A C 53 1_555 -0.109 -0.153 -0.151 -2.046 -5.736 1.791 30 A_G64:C53_A A 64 ? A 53 ? 19 1 1 A G 65 1_555 A C 52 1_555 0.063 -0.206 -0.367 -8.257 -10.990 -0.864 31 A_G65:C52_A A 65 ? A 52 ? 19 1 1 A U 66 1_555 A U 51 1_555 2.573 -1.794 0.118 1.948 -9.608 13.143 32 A_U66:U51_A A 66 ? A 51 ? 16 1 1 A A 67 1_555 A G 88 1_555 -6.818 -4.297 -0.213 -6.189 1.239 -9.279 33 A_A67:G88_A A 67 ? A 88 ? 11 10 1 A G 68 1_555 A C 87 1_555 -0.523 -0.155 -0.348 -1.650 -6.272 3.143 34 A_G68:C87_A A 68 ? A 87 ? 19 1 1 A G 69 1_555 A C 86 1_555 0.023 -0.165 -0.073 -5.086 -3.814 2.396 35 A_G69:C86_A A 69 ? A 86 ? 19 1 1 A G 70 1_555 A C 85 1_555 -0.352 -0.047 0.165 3.596 -1.451 2.147 36 A_G70:C85_A A 70 ? A 85 ? 19 1 1 A C 71 1_555 A G 84 1_555 -0.004 -0.099 -0.051 7.424 -6.044 -1.464 37 A_C71:G84_A A 71 ? A 84 ? 19 1 1 A U 72 1_555 A G 83 1_555 2.341 -0.671 -0.417 16.063 -14.890 -3.700 38 A_U72:G83_A A 72 ? A 83 ? 28 1 1 A G 116 1_555 A C 82 1_555 -0.192 -0.185 -0.410 -11.099 -10.197 4.996 39 A_G116:C82_A A 116 ? A 82 ? 19 1 1 A A 117 1_555 A U 81 1_555 0.369 -0.168 0.147 -4.088 -2.941 0.067 40 A_A117:U81_A A 117 ? A 81 ? 20 1 1 A A 118 1_555 A U 80 1_555 0.460 -0.182 -0.001 -0.358 -0.757 0.819 41 A_A118:U80_A A 118 ? A 80 ? 20 1 1 A A 119 1_555 A U 79 1_555 -0.157 -0.136 -0.012 -1.926 -3.503 0.090 42 A_A119:U79_A A 119 ? A 79 ? 20 1 1 A G 120 1_555 A C 78 1_555 -0.613 -0.236 -0.202 -8.941 -4.364 3.445 43 A_G120:C78_A A 120 ? A 78 ? 19 1 1 A A 121 1_555 A U 77 1_555 -0.019 -0.091 0.282 -5.871 -4.065 0.640 44 A_A121:U77_A A 121 ? A 77 ? 20 1 1 A G 122 1_555 A C 76 1_555 0.267 -0.192 0.057 -0.652 -16.982 0.919 45 A_G122:C76_A A 122 ? A 76 ? 19 1 1 A A 73 1_555 A U 114 1_555 0.762 -3.804 -1.452 36.010 -13.646 70.407 46 A_A73:U114_A A 73 ? A 114 ? 23 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 3 1_555 A G 113 1_555 A G 4 1_555 A C 112 1_555 1.190 -2.163 3.187 2.081 9.974 28.654 -5.890 -1.903 2.395 19.394 -4.046 30.376 1 AA_C3G4:C112G113_AA A 3 ? A 113 ? A 4 ? A 112 ? 1 A G 4 1_555 A C 112 1_555 A C 5 1_555 A G 111 1_555 -1.025 -2.207 3.162 -1.565 5.583 23.891 -6.734 1.975 2.646 13.239 3.710 24.574 2 AA_G4C5:G111C112_AA A 4 ? A 112 ? A 5 ? A 111 ? 1 A C 5 1_555 A G 111 1_555 A U 6 1_555 A A 110 1_555 -0.797 -2.410 3.299 -9.848 7.854 26.632 -6.351 -0.441 2.623 15.965 20.017 29.412 3 AA_C5U6:A110G111_AA A 5 ? A 111 ? A 6 ? A 110 ? 1 A U 6 1_555 A A 110 1_555 A G 7 1_555 A A 109 1_555 0.269 -0.741 2.883 3.235 7.660 56.508 -1.143 -0.126 2.780 8.042 -3.397 57.067 4 AA_U6G7:A109A110_AA A 6 ? A 110 ? A 7 ? A 109 ? 1 A G 19 1_555 A C 14 1_555 A G 20 1_555 A C 13 1_555 0.540 -2.334 3.232 -0.426 6.129 28.063 -5.963 -1.175 2.664 12.450 0.866 28.714 5 AA_G19G20:C13C14_AA A 19 ? A 14 ? A 20 ? A 13 ? 1 A G 20 1_555 A C 13 1_555 A G 21 1_555 A C 12 1_555 -1.043 -2.131 3.354 0.989 5.078 29.938 -5.054 2.183 2.926 9.737 -1.897 30.372 6 AA_G20G21:C12C13_AA A 20 ? A 13 ? A 21 ? A 12 ? 1 A G 21 1_555 A C 12 1_555 A A 22 1_555 A U 11 1_555 -0.187 -1.491 3.138 -2.758 4.424 29.245 -3.773 -0.173 2.892 8.675 5.409 29.696 7 AA_G21A22:U11C12_AA A 21 ? A 12 ? A 22 ? A 11 ? 1 A A 22 1_555 A U 11 1_555 A A 23 1_555 A U 10 1_555 0.114 -1.135 3.095 -2.442 -1.910 34.476 -1.627 -0.550 3.136 -3.214 4.110 34.610 8 AA_A22A23:U10U11_AA A 22 ? A 11 ? A 23 ? A 10 ? 1 A A 23 1_555 A U 10 1_555 A A 24 1_555 A U 108 1_555 1.841 -0.727 3.439 12.440 5.121 52.657 -1.145 -1.178 3.675 5.668 -13.771 54.229 9 AA_A23A24:U108U10_AA A 23 ? A 10 ? A 24 ? A 108 ? 1 A A 24 1_555 A U 108 1_555 A C 25 1_555 A G 107 1_555 0.725 -1.140 2.870 -0.602 12.032 28.303 -4.061 -1.464 2.198 23.315 1.167 30.712 10 AA_A24C25:G107U108_AA A 24 ? A 108 ? A 25 ? A 107 ? 1 A C 25 1_555 A G 107 1_555 A G 26 1_555 A C 106 1_555 0.846 -1.838 3.353 3.382 12.794 32.422 -4.872 -0.930 2.542 21.814 -5.766 34.951 11 AA_C25G26:C106G107_AA A 25 ? A 107 ? A 26 ? A 106 ? 1 A G 26 1_555 A C 106 1_555 A G 27 1_555 A U 105 1_555 0.093 -2.164 2.883 -4.655 4.932 18.772 -8.086 -2.004 2.163 14.521 13.704 19.949 12 AA_G26G27:U105C106_AA A 26 ? A 106 ? A 27 ? A 105 ? 1 A G 27 1_555 A U 105 1_555 A G 28 1_555 A C 104 1_555 -0.121 -1.437 3.247 0.588 -0.249 42.292 -1.966 0.227 3.253 -0.345 -0.814 42.296 13 AA_G27G28:C104U105_AA A 27 ? A 105 ? A 28 ? A 104 ? 1 A G 28 1_555 A C 104 1_555 A G 29 1_555 A C 103 1_555 0.174 -2.033 3.481 1.692 3.886 32.465 -4.298 -0.009 3.227 6.914 -3.010 32.733 14 AA_G28G29:C103C104_AA A 28 ? A 104 ? A 29 ? A 103 ? 1 A G 29 1_555 A C 103 1_555 A G 30 1_555 A A 102 1_555 -0.717 -0.616 3.420 1.346 7.113 63.065 -0.909 0.743 3.326 6.777 -1.282 63.436 15 AA_G29G30:A102C103_AA A 29 ? A 103 ? A 30 ? A 102 ? 1 A C 33 1_555 A C 99 1_555 A C 34 1_555 A G 98 1_555 0.763 -1.091 3.739 2.134 8.296 52.644 -1.808 -0.699 3.567 9.285 -2.388 53.288 16 AA_C33C34:G98C99_AA A 33 ? A 99 ? A 34 ? A 98 ? 1 A G 43 1_555 A C 96 1_555 A G 44 1_555 A C 93 1_555 3.548 -0.646 2.554 0.547 2.609 57.461 -0.781 -3.664 2.555 2.712 -0.568 57.518 17 AA_G43G44:C93C96_AA A 43 ? A 96 ? A 44 ? A 93 ? 1 A G 44 1_555 A C 93 1_555 A G 45 1_555 A C 92 1_555 1.282 -2.462 3.309 3.892 4.974 21.914 -7.947 -1.900 2.868 12.747 -9.976 22.795 18 AA_G44G45:C92C93_AA A 44 ? A 93 ? A 45 ? A 92 ? 1 A G 45 1_555 A C 92 1_555 A G 46 1_555 A C 91 1_555 -0.712 -2.065 3.164 -1.068 2.912 29.864 -4.550 1.167 2.977 5.632 2.065 30.021 19 AA_G45G46:C91C92_AA A 45 ? A 92 ? A 46 ? A 91 ? 1 A G 46 1_555 A C 91 1_555 A U 47 1_555 A A 90 1_555 -0.596 -2.171 3.288 -3.753 3.266 25.616 -5.682 0.319 3.046 7.279 8.364 26.087 20 AA_G46U47:A90C91_AA A 46 ? A 91 ? A 47 ? A 90 ? 1 A U 47 1_555 A A 90 1_555 A G 48 1_555 A A 89 1_555 -0.086 -0.960 2.868 -2.117 10.366 53.498 -1.585 -0.016 2.655 11.389 2.326 54.458 21 AA_U47G48:A89A90_AA A 47 ? A 90 ? A 48 ? A 89 ? 1 A A 60 1_555 A G 57 1_555 A G 61 1_555 A C 56 1_555 4.257 -1.626 3.522 -3.435 17.388 52.985 -2.721 -4.753 2.650 18.901 3.734 55.667 22 AA_A60G61:C56G57_AA A 60 ? A 57 ? A 61 ? A 56 ? 1 A G 61 1_555 A C 56 1_555 A U 62 1_555 A A 55 1_555 -0.503 -1.528 3.097 -1.443 5.138 34.862 -3.222 0.634 2.868 8.515 2.391 35.256 23 AA_G61U62:A55C56_AA A 61 ? A 56 ? A 62 ? A 55 ? 1 A U 62 1_555 A A 55 1_555 A G 63 1_555 A C 54 1_555 0.413 -1.639 3.155 -0.617 6.070 29.391 -4.308 -0.914 2.759 11.803 1.200 30.004 24 AA_U62G63:C54A55_AA A 62 ? A 55 ? A 63 ? A 54 ? 1 A G 63 1_555 A C 54 1_555 A G 64 1_555 A C 53 1_555 0.006 -1.729 3.117 1.619 6.383 31.945 -4.083 0.244 2.726 11.446 -2.903 32.600 25 AA_G63G64:C53C54_AA A 63 ? A 54 ? A 64 ? A 53 ? 1 A G 64 1_555 A C 53 1_555 A G 65 1_555 A C 52 1_555 0.106 -2.057 3.443 0.657 10.705 27.863 -6.098 -0.077 2.500 21.260 -1.304 29.818 26 AA_G64G65:C52C53_AA A 64 ? A 53 ? A 65 ? A 52 ? 1 A G 65 1_555 A C 52 1_555 A U 66 1_555 A U 51 1_555 0.628 -1.050 3.105 -5.418 1.153 41.283 -1.591 -1.418 2.973 1.627 7.643 41.637 27 AA_G65U66:U51C52_AA A 65 ? A 52 ? A 66 ? A 51 ? 1 A U 66 1_555 A U 51 1_555 A A 67 1_555 A G 88 1_555 0.973 -0.271 3.454 0.192 3.123 27.180 -1.389 -2.007 3.408 6.618 -0.406 27.356 28 AA_U66A67:G88U51_AA A 66 ? A 51 ? A 67 ? A 88 ? 1 A A 67 1_555 A G 88 1_555 A G 68 1_555 A C 87 1_555 1.011 -0.898 3.319 -0.434 4.256 55.766 -1.203 -1.103 3.241 4.542 0.463 55.917 29 AA_A67G68:C87G88_AA A 67 ? A 88 ? A 68 ? A 87 ? 1 A G 68 1_555 A C 87 1_555 A G 69 1_555 A C 86 1_555 0.638 -2.128 3.391 -0.930 2.534 32.764 -4.198 -1.288 3.203 4.483 1.644 32.872 30 AA_G68G69:C86C87_AA A 68 ? A 87 ? A 69 ? A 86 ? 1 A G 69 1_555 A C 86 1_555 A G 70 1_555 A C 85 1_555 -1.123 -2.594 2.873 -4.108 3.524 24.647 -6.816 1.550 2.631 8.130 9.477 25.225 31 AA_G69G70:C85C86_AA A 69 ? A 86 ? A 70 ? A 85 ? 1 A G 70 1_555 A C 85 1_555 A C 71 1_555 A G 84 1_555 -0.317 -1.604 3.259 1.434 1.160 33.087 -3.006 0.794 3.186 2.035 -2.516 33.137 32 AA_G70C71:G84C85_AA A 70 ? A 85 ? A 71 ? A 84 ? 1 A C 71 1_555 A G 84 1_555 A U 72 1_555 A G 83 1_555 0.214 -1.514 3.036 3.798 4.737 37.124 -2.906 0.115 2.835 7.379 -5.917 37.600 33 AA_C71U72:G83G84_AA A 71 ? A 84 ? A 72 ? A 83 ? 1 A U 72 1_555 A G 83 1_555 A G 116 1_555 A C 82 1_555 -1.892 -0.944 3.687 -2.958 16.103 38.686 -3.168 2.307 3.196 23.089 4.241 41.886 34 AA_U72G116:C82G83_AA A 72 ? A 83 ? A 116 ? A 82 ? 1 A G 116 1_555 A C 82 1_555 A A 117 1_555 A U 81 1_555 0.200 -1.493 3.114 -4.102 6.665 29.735 -3.995 -1.101 2.673 12.713 7.824 30.725 35 AA_G116A117:U81C82_AA A 116 ? A 82 ? A 117 ? A 81 ? 1 A A 117 1_555 A U 81 1_555 A A 118 1_555 A U 80 1_555 0.080 -1.992 3.178 2.798 5.288 31.189 -4.539 0.329 2.807 9.722 -5.145 31.744 36 AA_A117A118:U80U81_AA A 117 ? A 81 ? A 118 ? A 80 ? 1 A A 118 1_555 A U 80 1_555 A A 119 1_555 A U 79 1_555 0.139 -1.947 3.290 1.205 5.956 26.281 -5.610 -0.008 2.792 12.882 -2.606 26.962 37 AA_A118A119:U79U80_AA A 118 ? A 80 ? A 119 ? A 79 ? 1 A A 119 1_555 A U 79 1_555 A G 120 1_555 A C 78 1_555 0.686 -2.501 3.429 2.281 6.889 24.934 -7.388 -0.925 2.703 15.539 -5.145 25.952 38 AA_A119G120:C78U79_AA A 119 ? A 79 ? A 120 ? A 78 ? 1 A G 120 1_555 A C 78 1_555 A A 121 1_555 A U 77 1_555 -0.640 -2.274 3.106 -4.944 3.998 29.479 -5.122 0.304 2.847 7.743 9.576 30.142 39 AA_G120A121:U77C78_AA A 120 ? A 78 ? A 121 ? A 77 ? 1 A A 121 1_555 A U 77 1_555 A G 122 1_555 A C 76 1_555 -0.042 -1.514 3.219 6.136 1.063 35.588 -2.589 0.916 3.124 1.723 -9.945 36.111 40 AA_A121G122:C76U77_AA A 121 ? A 77 ? A 122 ? A 76 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 2BA 3 'MAGNESIUM ION' MG # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4QK8 _pdbx_initial_refinement_model.details 'PDB ENTRY 4QK8' #