data_4QLN # _entry.id 4QLN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QLN pdb_00004qln 10.2210/pdb4qln/pdb NDB NA3036 ? ? RCSB RCSB086210 ? ? WWPDB D_1000086210 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-13 2 'Structure model' 1 1 2014-09-03 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' entity 6 3 'Structure model' pdbx_entity_nonpoly 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.value' 19 3 'Structure model' '_struct_conn.pdbx_dist_value' 20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QLN _pdbx_database_status.recvd_initial_deposition_date 2014-06-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4QLM _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ren, A.M.' 1 'Patel, D.J.' 2 # _citation.id primary _citation.title 'c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 10 _citation.page_first 780 _citation.page_last 786 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25086509 _citation.pdbx_database_id_DOI 10.1038/nchembio.1606 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ren, A.' 1 ? primary 'Patel, D.J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (117-MER)' 40514.238 1 ? ? ? 'ydao riboswitch' 2 non-polymer syn ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 658.412 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGAUCGCUGAACCCGAAAGGGGCGGGGGACCCAGAAAUGGGGCGAAUCUCUUCCGAAAGGAAGAGUAGGGUUACUCCUUC GACCCGAGCCCGUCAGCUAACCUCGCAAGCGUCCGAAGGAGAAUC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGAUCGCUGAACCCGAAAGGGGCGGGGGACCCAGAAAUGGGGCGAAUCUCUUCCGAAAGGAAGAGUAGGGUUACUCCUUC GACCCGAGCCCGUCAGCUAACCUCGCAAGCGUCCGAAGGAGAAUC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 2BA 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 U n 1 5 C n 1 6 G n 1 7 C n 1 8 U n 1 9 G n 1 10 A n 1 11 A n 1 12 C n 1 13 C n 1 14 C n 1 15 G n 1 16 A n 1 17 A n 1 18 A n 1 19 G n 1 20 G n 1 21 G n 1 22 G n 1 23 C n 1 24 G n 1 25 G n 1 26 G n 1 27 G n 1 28 G n 1 29 A n 1 30 C n 1 31 C n 1 32 C n 1 33 A n 1 34 G n 1 35 A n 1 36 A n 1 37 A n 1 38 U n 1 39 G n 1 40 G n 1 41 G n 1 42 G n 1 43 C n 1 44 G n 1 45 A n 1 46 A n 1 47 U n 1 48 C n 1 49 U n 1 50 C n 1 51 U n 1 52 U n 1 53 C n 1 54 C n 1 55 G n 1 56 A n 1 57 A n 1 58 A n 1 59 G n 1 60 G n 1 61 A n 1 62 A n 1 63 G n 1 64 A n 1 65 G n 1 66 U n 1 67 A n 1 68 G n 1 69 G n 1 70 G n 1 71 U n 1 72 U n 1 73 A n 1 74 C n 1 75 U n 1 76 C n 1 77 C n 1 78 U n 1 79 U n 1 80 C n 1 81 G n 1 82 A n 1 83 C n 1 84 C n 1 85 C n 1 86 G n 1 87 A n 1 88 G n 1 89 C n 1 90 C n 1 91 C n 1 92 G n 1 93 U n 1 94 C n 1 95 A n 1 96 G n 1 97 C n 1 98 U n 1 99 A n 1 100 A n 1 101 C n 1 102 C n 1 103 U n 1 104 C n 1 105 G n 1 106 C n 1 107 A n 1 108 A n 1 109 G n 1 110 C n 1 111 G n 1 112 U n 1 113 C n 1 114 C n 1 115 G n 1 116 A n 1 117 A n 1 118 G n 1 119 G n 1 120 A n 1 121 G n 1 122 A n 1 123 A n 1 124 U n 1 125 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MB4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoanaerobacter tengcongensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273068 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'In vitro translation' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2BA non-polymer . ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate" 'C20 H24 N10 O12 P2' 658.412 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 ? ? ? A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 U 4 4 4 U U A . n A 1 5 C 5 5 5 C C A . n A 1 6 G 6 6 6 G G A . n A 1 7 C 7 7 7 C C A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 A 11 11 11 A A A . n A 1 12 C 12 12 12 C C A . n A 1 13 C 13 13 13 C C A . n A 1 14 C 14 14 14 C C A . n A 1 15 G 15 15 15 G G A . n A 1 16 A 16 16 16 A A A . n A 1 17 A 17 17 ? ? ? A . n A 1 18 A 18 18 18 A A A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 G 21 21 21 G G A . n A 1 22 G 22 22 22 G G A . n A 1 23 C 23 23 23 C C A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 A 29 29 29 A A A . n A 1 30 C 30 30 30 C C A . n A 1 31 C 31 31 31 C C A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 G 34 34 34 G G A . n A 1 35 A 35 35 ? ? ? A . n A 1 36 A 36 36 ? ? ? A . n A 1 37 A 37 37 ? ? ? A . n A 1 38 U 38 38 ? ? ? A . n A 1 39 G 39 39 39 G G A . n A 1 40 G 40 40 40 G G A . n A 1 41 G 41 41 41 G G A . n A 1 42 G 42 42 42 G G A . n A 1 43 C 43 43 43 C C A . n A 1 44 G 44 44 44 G G A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 U 47 47 47 U U A . n A 1 48 C 48 48 48 C C A . n A 1 49 U 49 49 49 U U A . n A 1 50 C 50 50 50 C C A . n A 1 51 U 51 51 51 U U A . n A 1 52 U 52 52 52 U U A . n A 1 53 C 53 53 53 C C A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 A 56 56 56 A A A . n A 1 57 A 57 57 57 A A A . n A 1 58 A 58 58 58 A A A . n A 1 59 G 59 59 59 G G A . n A 1 60 G 60 60 60 G G A . n A 1 61 A 61 61 61 A A A . n A 1 62 A 62 62 62 A A A . n A 1 63 G 63 63 63 G G A . n A 1 64 A 64 64 64 A A A . n A 1 65 G 65 65 65 G G A . n A 1 66 U 66 66 66 U U A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 G 70 70 70 G G A . n A 1 71 U 71 71 71 U U A . n A 1 72 U 72 72 72 U U A . n A 1 73 A 73 73 73 A A A . n A 1 74 C 74 74 74 C C A . n A 1 75 U 75 75 75 U U A . n A 1 76 C 76 76 76 C C A . n A 1 77 C 77 77 77 C C A . n A 1 78 U 78 78 78 U U A . n A 1 79 U 79 79 79 U U A . n A 1 80 C 80 80 80 C C A . n A 1 81 G 81 81 81 G G A . n A 1 82 A 82 82 82 A A A . n A 1 83 C 83 83 83 C C A . n A 1 84 C 84 84 84 C C A . n A 1 85 C 85 85 85 C C A . n A 1 86 G 86 86 86 G G A . n A 1 87 A 87 87 87 A A A . n A 1 88 G 88 88 88 G G A . n A 1 89 C 89 89 89 C C A . n A 1 90 C 90 90 90 C C A . n A 1 91 C 91 91 91 C C A . n A 1 92 G 92 92 92 G G A . n A 1 93 U 93 93 93 U U A . n A 1 94 C 94 94 94 C C A . n A 1 95 A 95 95 95 A A A . n A 1 96 G 96 96 96 G G A . n A 1 97 C 97 97 97 C C A . n A 1 98 U 98 98 98 U U A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 C 101 101 101 C C A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 C 104 104 104 C C A . n A 1 105 G 105 105 105 G G A . n A 1 106 C 106 106 106 C C A . n A 1 107 A 107 107 107 A A A . n A 1 108 A 108 108 108 A A A . n A 1 109 G 109 109 109 G G A . n A 1 110 C 110 110 110 C C A . n A 1 111 G 111 111 111 G G A . n A 1 112 U 112 112 112 U U A . n A 1 113 C 113 113 113 C C A . n A 1 114 C 114 114 114 C C A . n A 1 115 G 115 115 115 G G A . n A 1 116 A 116 116 116 A A A . n A 1 117 A 117 117 117 A A A . n A 1 118 G 118 118 118 G G A . n A 1 119 G 119 119 119 G G A . n A 1 120 A 120 120 120 A A A . n A 1 121 G 121 121 121 G G A . n A 1 122 A 122 122 122 A A A . n A 1 123 A 123 123 123 A A A . n A 1 124 U 124 124 ? ? ? A . n A 1 125 C 125 125 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2BA 1 201 201 2BA 2BA A . C 2 2BA 1 202 202 2BA 2BA A . D 3 MG 1 203 1 MG MG A . E 3 MG 1 204 3 MG MG A . F 4 HOH 1 301 3 HOH HOH A . F 4 HOH 2 302 5 HOH HOH A . F 4 HOH 3 303 6 HOH HOH A . F 4 HOH 4 304 11 HOH HOH A . F 4 HOH 5 305 12 HOH HOH A . F 4 HOH 6 306 13 HOH HOH A . F 4 HOH 7 307 14 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A G 21 ? O6 ? A G 21 O6 2 1 N 1 A 2BA 201 ? "O2'" ? B 2BA 1 "O2'" 3 1 N 1 A 2BA 201 ? "O2'1" ? B 2BA 1 "O2'1" 4 1 N 1 A 2BA 202 ? "O2'" ? C 2BA 1 "O2'" 5 1 N 1 A 2BA 202 ? "O2'1" ? C 2BA 1 "O2'1" # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 3 XDS 'data reduction' . ? 4 # _cell.entry_id 4QLN _cell.length_a 77.874 _cell.length_b 87.051 _cell.length_c 144.553 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QLN _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4QLN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.02 _exptl_crystal.density_percent_sol 59.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range 8.7-9.2 _exptl_crystal_grow.pdbx_details '0.1 M Na-Bicine, pH 8.7-9.2 and 2.6-3.2 M (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4QLN _reflns.observed_criterion_sigma_I 1.100 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.650 _reflns.number_obs 49287 _reflns.number_all ? _reflns.percent_possible_obs 1.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4QLN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13780 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.25 _refine.ls_d_res_high 2.65 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.290 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.040 _refine.ls_number_reflns_R_free 732 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.530 _refine.pdbx_overall_phase_error 33.580 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2514 _refine_hist.pdbx_number_atoms_ligand 86 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2607 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 45.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.015 ? ? 3035 'X-RAY DIFFRACTION' ? f_angle_d 1.820 ? ? 4716 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 24.397 ? ? 1512 'X-RAY DIFFRACTION' ? f_chiral_restr 0.166 ? ? 610 'X-RAY DIFFRACTION' ? f_plane_restr 0.011 ? ? 131 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6500 2.8546 2690 0.3757 99.00 0.4483 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.8546 3.1418 2718 0.3027 100.00 0.3655 . . 173 . . . . 'X-RAY DIFFRACTION' . 3.1418 3.5963 2754 0.2208 100.00 0.3042 . . 143 . . . . 'X-RAY DIFFRACTION' . 3.5963 4.5303 2786 0.1996 100.00 0.2858 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.5303 45.2610 2840 0.1897 98.00 0.2448 . . 141 . . . . # _database_PDB_matrix.entry_id 4QLN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4QLN _struct.title 'structure of ydao riboswitch binding with c-di-dAMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QLN _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'ydao riboswitch, c-di-AMP, rna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4QLN _struct_ref.pdbx_db_accession 4QLN _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QLN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4QLN _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 125 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2480 ? 1 MORE -64 ? 1 'SSA (A^2)' 35940 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -72.2765000000 # _struct_biol.id 1 _struct_biol.details 'AUTHORS HAVE INDICATED THAT THE BIOLOGICAL UNIT IS UNKNOWN.' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 28 OP2 ? ? ? 1_555 D MG . MG ? ? A G 28 A MG 203 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc2 metalc ? ? A U 72 OP1 ? ? ? 1_555 E MG . MG ? ? A U 72 A MG 204 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc3 metalc ? ? A A 73 "O4'" ? ? ? 1_555 E MG . MG ? ? A A 73 A MG 204 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc4 metalc ? ? A G 96 OP1 ? ? ? 1_555 D MG . MG ? ? A G 96 A MG 203 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc5 metalc ? ? A C 97 OP2 ? ? ? 1_555 D MG . MG ? ? A C 97 A MG 203 1_555 ? ? ? ? ? ? ? 1.720 ? ? metalc6 metalc ? ? A U 98 O4 ? ? ? 1_555 D MG . MG ? ? A U 98 A MG 203 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 303 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 204 A HOH 301 1_555 ? ? ? ? ? ? ? 2.079 ? ? hydrog1 hydrog ? ? A C 5 O2 ? ? ? 1_555 A A 73 N6 ? ? A C 5 A A 73 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog2 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 110 N3 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 110 O2 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 110 N4 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 109 N1 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 109 O6 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 109 N2 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 8 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 8 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 9 N2 ? ? ? 1_555 A A 107 N7 ? ? A G 9 A A 107 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A G 9 N3 ? ? ? 1_555 A A 107 N6 ? ? A G 9 A A 107 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? A A 10 N3 ? ? ? 1_555 A G 105 N2 ? ? A A 10 A G 105 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog16 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 21 N2 ? ? A C 12 A G 21 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog17 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 20 N1 A ? A C 13 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 20 O6 A ? A C 13 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 20 N2 A ? A C 13 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 19 N1 A ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 19 O6 A ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 19 N2 A ? A C 14 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 106 N3 ? ? A G 22 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 106 O2 ? ? A G 22 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 106 N4 ? ? A G 22 A C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 23 N3 ? ? ? 1_555 A G 105 N1 ? ? A C 23 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 23 N4 ? ? ? 1_555 A G 105 O6 ? ? A C 23 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 23 O2 ? ? ? 1_555 A G 105 N2 ? ? A C 23 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 25 N1 ? ? ? 1_555 A U 103 O2 ? ? A G 25 A U 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog33 hydrog ? ? A G 25 O6 ? ? ? 1_555 A U 103 N3 ? ? A G 25 A U 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog34 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 101 N3 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 101 O2 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 101 N4 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 28 N2 ? ? ? 1_555 A A 100 N7 ? ? A G 28 A A 100 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog41 hydrog ? ? A G 28 N3 ? ? ? 1_555 A A 100 N6 ? ? A G 28 A A 100 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog42 hydrog ? ? A C 31 N4 ? ? ? 1_555 A C 97 O2 ? ? A C 31 A C 97 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog43 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 96 N1 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 96 O6 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 96 N2 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 94 N3 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 94 O2 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 94 N4 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 40 N1 ? ? ? 1_555 A C 91 N3 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 40 N2 ? ? ? 1_555 A C 91 O2 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 40 O6 ? ? ? 1_555 A C 91 N4 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 40 N2 ? ? ? 1_555 A C 94 N3 ? ? A G 40 A C 94 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog53 hydrog ? ? A G 40 N2 ? ? ? 1_555 A A 95 N7 ? ? A G 40 A A 95 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog54 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 90 N3 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 90 O2 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 90 N4 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 89 N3 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 89 O2 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 89 N4 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 88 N1 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 88 O6 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 88 N2 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 44 N2 ? ? ? 1_555 A A 87 N1 ? ? A G 44 A A 87 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog64 hydrog ? ? A A 45 N3 ? ? ? 1_555 A G 68 N2 ? ? A A 45 A G 68 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog65 hydrog ? ? A U 47 N3 ? ? ? 1_555 A U 66 O2 ? ? A U 47 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog66 hydrog ? ? A U 47 O4 ? ? ? 1_555 A U 66 N3 ? ? A U 47 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog67 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A U 49 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 49 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A U 49 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 49 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A U 49 O2 ? ? ? 1_555 A G 65 N2 ? ? A U 49 A G 65 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog73 hydrog ? ? A C 50 N3 ? ? ? 1_555 A G 63 N1 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 50 N4 ? ? ? 1_555 A G 63 O6 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 50 O2 ? ? ? 1_555 A G 63 N2 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A U 51 N3 ? ? ? 1_555 A A 62 N1 ? ? A U 51 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A U 51 O4 ? ? ? 1_555 A A 62 N6 ? ? A U 51 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 52 N3 ? ? ? 1_555 A A 61 N1 ? ? A U 52 A A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A U 52 O4 ? ? ? 1_555 A A 61 N6 ? ? A U 52 A A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 53 N3 ? ? ? 1_555 A G 60 N1 ? ? A C 53 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 53 N4 ? ? ? 1_555 A G 60 O6 ? ? A C 53 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 53 O2 ? ? ? 1_555 A G 60 N2 ? ? A C 53 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A A 67 N6 ? ? ? 1_555 A G 86 N3 ? ? A A 67 A G 86 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog87 hydrog ? ? A A 67 N7 ? ? ? 1_555 A G 86 N2 ? ? A A 67 A G 86 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog88 hydrog ? ? A G 68 N1 ? ? ? 1_555 A C 85 N3 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 68 N2 ? ? ? 1_555 A C 85 O2 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 68 O6 ? ? ? 1_555 A C 85 N4 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 84 N3 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 84 O2 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 84 N4 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A G 70 N1 ? ? ? 1_555 A C 83 N3 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A G 70 N2 ? ? ? 1_555 A C 83 O2 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A G 70 O6 ? ? ? 1_555 A C 83 N4 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A U 71 N3 ? ? ? 1_555 A A 82 N1 ? ? A U 71 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A U 71 O4 ? ? ? 1_555 A A 82 N6 ? ? A U 71 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A U 72 N3 ? ? ? 1_555 A G 81 O6 ? ? A U 72 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog100 hydrog ? ? A U 72 O2 ? ? ? 1_555 A G 81 N1 ? ? A U 72 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog101 hydrog ? ? A A 73 N6 ? ? ? 1_555 A U 112 O4 ? ? A A 73 A U 112 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog102 hydrog ? ? A A 73 N7 ? ? ? 1_555 A U 112 N3 ? ? A A 73 A U 112 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog103 hydrog ? ? A C 74 N3 ? ? ? 1_555 A G 121 N1 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 74 N4 ? ? ? 1_555 A G 121 O6 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 74 O2 ? ? ? 1_555 A G 121 N2 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A U 75 N3 ? ? ? 1_555 A A 120 N1 ? ? A U 75 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A U 75 O4 ? ? ? 1_555 A A 120 N6 ? ? A U 75 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A C 76 N3 ? ? ? 1_555 A G 119 N1 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A C 76 N4 ? ? ? 1_555 A G 119 O6 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 76 O2 ? ? ? 1_555 A G 119 N2 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 77 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 77 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 77 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A U 78 N3 ? ? ? 1_555 A A 117 N1 ? ? A U 78 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A U 78 O4 ? ? ? 1_555 A A 117 N6 ? ? A U 78 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A U 79 N3 ? ? ? 1_555 A A 116 N1 ? ? A U 79 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A U 79 O4 ? ? ? 1_555 A A 116 N6 ? ? A U 79 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A C 80 N3 ? ? ? 1_555 A G 115 N1 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 115 O6 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A C 80 O2 ? ? ? 1_555 A G 115 N2 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A C 91 O2 ? ? ? 1_555 A A 95 N6 ? ? A C 91 A A 95 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog122 hydrog ? ? A G 111 N2 ? ? ? 1_555 A U 112 O4 ? ? A G 111 A U 112 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP1 ? A G 96 ? A G 96 ? 1_555 73.8 ? 2 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP2 ? A C 97 ? A C 97 ? 1_555 161.7 ? 3 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OP2 ? A C 97 ? A C 97 ? 1_555 98.3 ? 4 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 72.8 ? 5 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 102.3 ? 6 OP2 ? A C 97 ? A C 97 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 125.3 ? 7 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 303 ? 1_555 65.1 ? 8 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 303 ? 1_555 131.1 ? 9 OP2 ? A C 97 ? A C 97 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 303 ? 1_555 112.6 ? 10 O4 ? A U 98 ? A U 98 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 303 ? 1_555 90.0 ? 11 OP1 ? A U 72 ? A U 72 ? 1_555 MG ? E MG . ? A MG 204 ? 1_555 "O4'" ? A A 73 ? A A 73 ? 1_555 93.2 ? 12 OP1 ? A U 72 ? A U 72 ? 1_555 MG ? E MG . ? A MG 204 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 93.4 ? 13 "O4'" ? A A 73 ? A A 73 ? 1_555 MG ? E MG . ? A MG 204 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 72.1 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2BA 201 ? 14 'BINDING SITE FOR RESIDUE 2BA A 201' AC2 Software A 2BA 202 ? 13 'BINDING SITE FOR RESIDUE 2BA A 202' AC3 Software A MG 203 ? 5 'BINDING SITE FOR RESIDUE MG A 203' AC4 Software A MG 204 ? 3 'BINDING SITE FOR RESIDUE MG A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 G A 6 ? G A 6 . ? 1_555 ? 2 AC1 14 C A 7 ? C A 7 . ? 1_555 ? 3 AC1 14 U A 8 ? U A 8 . ? 1_555 ? 4 AC1 14 A A 45 ? A A 45 . ? 1_555 ? 5 AC1 14 G A 69 ? G A 69 . ? 1_555 ? 6 AC1 14 G A 70 ? G A 70 . ? 1_555 ? 7 AC1 14 U A 71 ? U A 71 . ? 1_555 ? 8 AC1 14 A A 73 ? A A 73 . ? 1_555 ? 9 AC1 14 C A 84 ? C A 84 . ? 1_555 ? 10 AC1 14 C A 85 ? C A 85 . ? 1_555 ? 11 AC1 14 G A 109 ? G A 109 . ? 1_555 ? 12 AC1 14 C A 110 ? C A 110 . ? 1_555 ? 13 AC1 14 G A 111 ? G A 111 . ? 1_555 ? 14 AC1 14 U A 112 ? U A 112 . ? 1_555 ? 15 AC2 13 A A 10 ? A A 10 . ? 1_555 ? 16 AC2 13 G A 24 ? G A 24 . ? 1_555 ? 17 AC2 13 G A 25 ? G A 25 . ? 1_555 ? 18 AC2 13 G A 26 ? G A 26 . ? 1_555 ? 19 AC2 13 G A 27 ? G A 27 . ? 1_555 ? 20 AC2 13 G A 41 ? G A 41 . ? 1_555 ? 21 AC2 13 G A 42 ? G A 42 . ? 1_555 ? 22 AC2 13 C A 43 ? C A 43 . ? 1_555 ? 23 AC2 13 C A 90 ? C A 90 . ? 1_555 ? 24 AC2 13 C A 91 ? C A 91 . ? 1_555 ? 25 AC2 13 A A 95 ? A A 95 . ? 1_555 ? 26 AC2 13 C A 104 ? C A 104 . ? 1_555 ? 27 AC2 13 G A 105 ? G A 105 . ? 1_555 ? 28 AC3 5 G A 28 ? G A 28 . ? 1_555 ? 29 AC3 5 G A 96 ? G A 96 . ? 1_555 ? 30 AC3 5 C A 97 ? C A 97 . ? 1_555 ? 31 AC3 5 U A 98 ? U A 98 . ? 1_555 ? 32 AC3 5 HOH F . ? HOH A 303 . ? 1_555 ? 33 AC4 3 U A 72 ? U A 72 . ? 1_555 ? 34 AC4 3 A A 73 ? A A 73 . ? 1_555 ? 35 AC4 3 HOH F . ? HOH A 301 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N9 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 21 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 B _pdbx_validate_rmsd_bond.auth_atom_id_2 C4 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 21 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.427 _pdbx_validate_rmsd_bond.bond_target_value 1.375 _pdbx_validate_rmsd_bond.bond_deviation 0.052 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.008 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N3 A G 21 ? ? C4 A G 21 ? ? C5 A G 21 ? ? 125.41 128.60 -3.19 0.50 N 2 1 N7 A G 21 ? ? C8 A G 21 ? ? N9 A G 21 ? B 116.62 113.10 3.52 0.50 N 3 1 N3 A G 21 ? ? C4 A G 21 ? ? N9 A G 21 ? B 129.96 126.00 3.96 0.60 N 4 1 C8 A G 21 ? ? N9 A G 21 ? B "C1'" A G 21 ? B 112.77 127.00 -14.23 1.30 N 5 1 C4 A G 21 ? ? N9 A G 21 ? B "C1'" A G 21 ? B 143.10 126.50 16.60 1.30 N 6 1 C8 A G 24 ? ? N9 A G 24 ? ? C4 A G 24 ? ? 109.01 106.40 2.61 0.40 N 7 1 N1 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 114.71 118.90 -4.19 0.60 N 8 1 C2 A U 78 ? ? N3 A U 78 ? ? C4 A U 78 ? ? 123.21 127.00 -3.79 0.60 N 9 1 C5 A U 78 ? ? C6 A U 78 ? ? N1 A U 78 ? ? 119.35 122.70 -3.35 0.50 N 10 1 C2 A C 94 ? ? N1 A C 94 ? ? "C1'" A C 94 ? ? 126.19 118.80 7.39 1.10 N 11 1 C6 A C 106 ? ? N1 A C 106 ? ? C2 A C 106 ? ? 122.87 120.30 2.57 0.40 N # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -6.9183 _pdbx_refine_tls.origin_y -31.8936 _pdbx_refine_tls.origin_z -17.7985 _pdbx_refine_tls.T[1][1] 0.4516 _pdbx_refine_tls.T[2][2] 0.4263 _pdbx_refine_tls.T[3][3] 0.4708 _pdbx_refine_tls.T[1][2] 0.0145 _pdbx_refine_tls.T[1][3] 0.0570 _pdbx_refine_tls.T[2][3] 0.0956 _pdbx_refine_tls.L[1][1] 4.8849 _pdbx_refine_tls.L[2][2] 1.2601 _pdbx_refine_tls.L[3][3] 3.4231 _pdbx_refine_tls.L[1][2] -0.5238 _pdbx_refine_tls.L[1][3] -0.9218 _pdbx_refine_tls.L[2][3] 0.5970 _pdbx_refine_tls.S[1][1] -0.1206 _pdbx_refine_tls.S[1][2] -0.6265 _pdbx_refine_tls.S[1][3] -0.3052 _pdbx_refine_tls.S[2][1] 0.0753 _pdbx_refine_tls.S[2][2] -0.0594 _pdbx_refine_tls.S[2][3] 0.0341 _pdbx_refine_tls.S[3][1] 0.0892 _pdbx_refine_tls.S[3][2] 0.0052 _pdbx_refine_tls.S[3][3] 0.1386 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G 1 ? A G 1 2 1 Y 1 A A 17 ? A A 17 3 1 Y 1 A A 35 ? A A 35 4 1 Y 1 A A 36 ? A A 36 5 1 Y 1 A A 37 ? A A 37 6 1 Y 1 A U 38 ? A U 38 7 1 Y 1 A U 124 ? A U 124 8 1 Y 1 A C 125 ? A C 125 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2BA P P N R 1 2BA O1P O N N 2 2BA O2P O N N 3 2BA "O5'" O N N 4 2BA "C5'" C N N 5 2BA "C4'" C N R 6 2BA "O4'" O N N 7 2BA "C3'" C N S 8 2BA "O3'" O N N 9 2BA "C2'" C N R 10 2BA "O2'" O N N 11 2BA "C1'" C N R 12 2BA N9 N Y N 13 2BA C8 C Y N 14 2BA N7 N Y N 15 2BA C5 C Y N 16 2BA C6 C Y N 17 2BA N6 N N N 18 2BA N1 N Y N 19 2BA C2 C Y N 20 2BA N3 N Y N 21 2BA C4 C Y N 22 2BA P1 P N R 23 2BA O1P1 O N N 24 2BA O2P1 O N N 25 2BA "O5'1" O N N 26 2BA "C5'1" C N N 27 2BA "C4'1" C N R 28 2BA "O4'1" O N N 29 2BA "C3'1" C N S 30 2BA "O3'1" O N N 31 2BA "C2'1" C N R 32 2BA "O2'1" O N N 33 2BA "C1'1" C N R 34 2BA N91 N Y N 35 2BA C81 C Y N 36 2BA N71 N Y N 37 2BA C51 C Y N 38 2BA C61 C Y N 39 2BA N61 N N N 40 2BA N11 N Y N 41 2BA C21 C Y N 42 2BA N31 N Y N 43 2BA C41 C Y N 44 2BA "H5'" H N N 45 2BA "H5'A" H N N 46 2BA "H4'" H N N 47 2BA "H3'" H N N 48 2BA "H2'" H N N 49 2BA "HO2'" H N N 50 2BA "H1'" H N N 51 2BA H8 H N N 52 2BA HN6 H N N 53 2BA HN6A H N N 54 2BA H2 H N N 55 2BA "HC5'" H N N 56 2BA HC5A H N N 57 2BA "HC4'" H N N 58 2BA "HC3'" H N N 59 2BA "HC2'" H N N 60 2BA HO2A H N N 61 2BA "HC1'" H N N 62 2BA HC8 H N N 63 2BA H1N6 H N N 64 2BA H1NA H N N 65 2BA HC2 H N N 66 2BA H2P H N N 67 2BA H2OP H N N 68 A OP3 O N N 69 A P P N N 70 A OP1 O N N 71 A OP2 O N N 72 A "O5'" O N N 73 A "C5'" C N N 74 A "C4'" C N R 75 A "O4'" O N N 76 A "C3'" C N S 77 A "O3'" O N N 78 A "C2'" C N R 79 A "O2'" O N N 80 A "C1'" C N R 81 A N9 N Y N 82 A C8 C Y N 83 A N7 N Y N 84 A C5 C Y N 85 A C6 C Y N 86 A N6 N N N 87 A N1 N Y N 88 A C2 C Y N 89 A N3 N Y N 90 A C4 C Y N 91 A HOP3 H N N 92 A HOP2 H N N 93 A "H5'" H N N 94 A "H5''" H N N 95 A "H4'" H N N 96 A "H3'" H N N 97 A "HO3'" H N N 98 A "H2'" H N N 99 A "HO2'" H N N 100 A "H1'" H N N 101 A H8 H N N 102 A H61 H N N 103 A H62 H N N 104 A H2 H N N 105 C OP3 O N N 106 C P P N N 107 C OP1 O N N 108 C OP2 O N N 109 C "O5'" O N N 110 C "C5'" C N N 111 C "C4'" C N R 112 C "O4'" O N N 113 C "C3'" C N S 114 C "O3'" O N N 115 C "C2'" C N R 116 C "O2'" O N N 117 C "C1'" C N R 118 C N1 N N N 119 C C2 C N N 120 C O2 O N N 121 C N3 N N N 122 C C4 C N N 123 C N4 N N N 124 C C5 C N N 125 C C6 C N N 126 C HOP3 H N N 127 C HOP2 H N N 128 C "H5'" H N N 129 C "H5''" H N N 130 C "H4'" H N N 131 C "H3'" H N N 132 C "HO3'" H N N 133 C "H2'" H N N 134 C "HO2'" H N N 135 C "H1'" H N N 136 C H41 H N N 137 C H42 H N N 138 C H5 H N N 139 C H6 H N N 140 G OP3 O N N 141 G P P N N 142 G OP1 O N N 143 G OP2 O N N 144 G "O5'" O N N 145 G "C5'" C N N 146 G "C4'" C N R 147 G "O4'" O N N 148 G "C3'" C N S 149 G "O3'" O N N 150 G "C2'" C N R 151 G "O2'" O N N 152 G "C1'" C N R 153 G N9 N Y N 154 G C8 C Y N 155 G N7 N Y N 156 G C5 C Y N 157 G C6 C N N 158 G O6 O N N 159 G N1 N N N 160 G C2 C N N 161 G N2 N N N 162 G N3 N N N 163 G C4 C Y N 164 G HOP3 H N N 165 G HOP2 H N N 166 G "H5'" H N N 167 G "H5''" H N N 168 G "H4'" H N N 169 G "H3'" H N N 170 G "HO3'" H N N 171 G "H2'" H N N 172 G "HO2'" H N N 173 G "H1'" H N N 174 G H8 H N N 175 G H1 H N N 176 G H21 H N N 177 G H22 H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 MG MG MG N N 182 U OP3 O N N 183 U P P N N 184 U OP1 O N N 185 U OP2 O N N 186 U "O5'" O N N 187 U "C5'" C N N 188 U "C4'" C N R 189 U "O4'" O N N 190 U "C3'" C N S 191 U "O3'" O N N 192 U "C2'" C N R 193 U "O2'" O N N 194 U "C1'" C N R 195 U N1 N N N 196 U C2 C N N 197 U O2 O N N 198 U N3 N N N 199 U C4 C N N 200 U O4 O N N 201 U C5 C N N 202 U C6 C N N 203 U HOP3 H N N 204 U HOP2 H N N 205 U "H5'" H N N 206 U "H5''" H N N 207 U "H4'" H N N 208 U "H3'" H N N 209 U "HO3'" H N N 210 U "H2'" H N N 211 U "HO2'" H N N 212 U "H1'" H N N 213 U H3 H N N 214 U H5 H N N 215 U H6 H N N 216 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2BA P O1P doub N N 1 2BA P O2P sing N N 2 2BA P "O5'" sing N N 3 2BA P "O3'1" sing N N 4 2BA "O5'" "C5'" sing N N 5 2BA "C5'" "C4'" sing N N 6 2BA "C4'" "O4'" sing N N 7 2BA "C4'" "C3'" sing N N 8 2BA "O4'" "C1'" sing N N 9 2BA "C3'" "O3'" sing N N 10 2BA "C3'" "C2'" sing N N 11 2BA "O3'" P1 sing N N 12 2BA "C2'" "O2'" sing N N 13 2BA "C2'" "C1'" sing N N 14 2BA "C1'" N9 sing N N 15 2BA N9 C8 sing Y N 16 2BA N9 C4 sing Y N 17 2BA C8 N7 doub Y N 18 2BA N7 C5 sing Y N 19 2BA C5 C6 doub Y N 20 2BA C5 C4 sing Y N 21 2BA C6 N6 sing N N 22 2BA C6 N1 sing Y N 23 2BA N1 C2 doub Y N 24 2BA C2 N3 sing Y N 25 2BA N3 C4 doub Y N 26 2BA P1 O1P1 doub N N 27 2BA P1 O2P1 sing N N 28 2BA P1 "O5'1" sing N N 29 2BA "O5'1" "C5'1" sing N N 30 2BA "C5'1" "C4'1" sing N N 31 2BA "C4'1" "O4'1" sing N N 32 2BA "C4'1" "C3'1" sing N N 33 2BA "O4'1" "C1'1" sing N N 34 2BA "C3'1" "O3'1" sing N N 35 2BA "C3'1" "C2'1" sing N N 36 2BA "C2'1" "O2'1" sing N N 37 2BA "C2'1" "C1'1" sing N N 38 2BA "C1'1" N91 sing N N 39 2BA N91 C81 sing Y N 40 2BA N91 C41 sing Y N 41 2BA C81 N71 doub Y N 42 2BA N71 C51 sing Y N 43 2BA C51 C61 doub Y N 44 2BA C51 C41 sing Y N 45 2BA C61 N61 sing N N 46 2BA C61 N11 sing Y N 47 2BA N11 C21 doub Y N 48 2BA C21 N31 sing Y N 49 2BA N31 C41 doub Y N 50 2BA "C5'" "H5'" sing N N 51 2BA "C5'" "H5'A" sing N N 52 2BA "C4'" "H4'" sing N N 53 2BA "C3'" "H3'" sing N N 54 2BA "C2'" "H2'" sing N N 55 2BA "O2'" "HO2'" sing N N 56 2BA "C1'" "H1'" sing N N 57 2BA C8 H8 sing N N 58 2BA N6 HN6 sing N N 59 2BA N6 HN6A sing N N 60 2BA C2 H2 sing N N 61 2BA "C5'1" "HC5'" sing N N 62 2BA "C5'1" HC5A sing N N 63 2BA "C4'1" "HC4'" sing N N 64 2BA "C3'1" "HC3'" sing N N 65 2BA "C2'1" "HC2'" sing N N 66 2BA "O2'1" HO2A sing N N 67 2BA "C1'1" "HC1'" sing N N 68 2BA C81 HC8 sing N N 69 2BA N61 H1N6 sing N N 70 2BA N61 H1NA sing N N 71 2BA C21 HC2 sing N N 72 2BA O2P H2P sing N N 73 2BA O2P1 H2OP sing N N 74 A OP3 P sing N N 75 A OP3 HOP3 sing N N 76 A P OP1 doub N N 77 A P OP2 sing N N 78 A P "O5'" sing N N 79 A OP2 HOP2 sing N N 80 A "O5'" "C5'" sing N N 81 A "C5'" "C4'" sing N N 82 A "C5'" "H5'" sing N N 83 A "C5'" "H5''" sing N N 84 A "C4'" "O4'" sing N N 85 A "C4'" "C3'" sing N N 86 A "C4'" "H4'" sing N N 87 A "O4'" "C1'" sing N N 88 A "C3'" "O3'" sing N N 89 A "C3'" "C2'" sing N N 90 A "C3'" "H3'" sing N N 91 A "O3'" "HO3'" sing N N 92 A "C2'" "O2'" sing N N 93 A "C2'" "C1'" sing N N 94 A "C2'" "H2'" sing N N 95 A "O2'" "HO2'" sing N N 96 A "C1'" N9 sing N N 97 A "C1'" "H1'" sing N N 98 A N9 C8 sing Y N 99 A N9 C4 sing Y N 100 A C8 N7 doub Y N 101 A C8 H8 sing N N 102 A N7 C5 sing Y N 103 A C5 C6 sing Y N 104 A C5 C4 doub Y N 105 A C6 N6 sing N N 106 A C6 N1 doub Y N 107 A N6 H61 sing N N 108 A N6 H62 sing N N 109 A N1 C2 sing Y N 110 A C2 N3 doub Y N 111 A C2 H2 sing N N 112 A N3 C4 sing Y N 113 C OP3 P sing N N 114 C OP3 HOP3 sing N N 115 C P OP1 doub N N 116 C P OP2 sing N N 117 C P "O5'" sing N N 118 C OP2 HOP2 sing N N 119 C "O5'" "C5'" sing N N 120 C "C5'" "C4'" sing N N 121 C "C5'" "H5'" sing N N 122 C "C5'" "H5''" sing N N 123 C "C4'" "O4'" sing N N 124 C "C4'" "C3'" sing N N 125 C "C4'" "H4'" sing N N 126 C "O4'" "C1'" sing N N 127 C "C3'" "O3'" sing N N 128 C "C3'" "C2'" sing N N 129 C "C3'" "H3'" sing N N 130 C "O3'" "HO3'" sing N N 131 C "C2'" "O2'" sing N N 132 C "C2'" "C1'" sing N N 133 C "C2'" "H2'" sing N N 134 C "O2'" "HO2'" sing N N 135 C "C1'" N1 sing N N 136 C "C1'" "H1'" sing N N 137 C N1 C2 sing N N 138 C N1 C6 sing N N 139 C C2 O2 doub N N 140 C C2 N3 sing N N 141 C N3 C4 doub N N 142 C C4 N4 sing N N 143 C C4 C5 sing N N 144 C N4 H41 sing N N 145 C N4 H42 sing N N 146 C C5 C6 doub N N 147 C C5 H5 sing N N 148 C C6 H6 sing N N 149 G OP3 P sing N N 150 G OP3 HOP3 sing N N 151 G P OP1 doub N N 152 G P OP2 sing N N 153 G P "O5'" sing N N 154 G OP2 HOP2 sing N N 155 G "O5'" "C5'" sing N N 156 G "C5'" "C4'" sing N N 157 G "C5'" "H5'" sing N N 158 G "C5'" "H5''" sing N N 159 G "C4'" "O4'" sing N N 160 G "C4'" "C3'" sing N N 161 G "C4'" "H4'" sing N N 162 G "O4'" "C1'" sing N N 163 G "C3'" "O3'" sing N N 164 G "C3'" "C2'" sing N N 165 G "C3'" "H3'" sing N N 166 G "O3'" "HO3'" sing N N 167 G "C2'" "O2'" sing N N 168 G "C2'" "C1'" sing N N 169 G "C2'" "H2'" sing N N 170 G "O2'" "HO2'" sing N N 171 G "C1'" N9 sing N N 172 G "C1'" "H1'" sing N N 173 G N9 C8 sing Y N 174 G N9 C4 sing Y N 175 G C8 N7 doub Y N 176 G C8 H8 sing N N 177 G N7 C5 sing Y N 178 G C5 C6 sing N N 179 G C5 C4 doub Y N 180 G C6 O6 doub N N 181 G C6 N1 sing N N 182 G N1 C2 sing N N 183 G N1 H1 sing N N 184 G C2 N2 sing N N 185 G C2 N3 doub N N 186 G N2 H21 sing N N 187 G N2 H22 sing N N 188 G N3 C4 sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 U OP3 P sing N N 192 U OP3 HOP3 sing N N 193 U P OP1 doub N N 194 U P OP2 sing N N 195 U P "O5'" sing N N 196 U OP2 HOP2 sing N N 197 U "O5'" "C5'" sing N N 198 U "C5'" "C4'" sing N N 199 U "C5'" "H5'" sing N N 200 U "C5'" "H5''" sing N N 201 U "C4'" "O4'" sing N N 202 U "C4'" "C3'" sing N N 203 U "C4'" "H4'" sing N N 204 U "O4'" "C1'" sing N N 205 U "C3'" "O3'" sing N N 206 U "C3'" "C2'" sing N N 207 U "C3'" "H3'" sing N N 208 U "O3'" "HO3'" sing N N 209 U "C2'" "O2'" sing N N 210 U "C2'" "C1'" sing N N 211 U "C2'" "H2'" sing N N 212 U "O2'" "HO2'" sing N N 213 U "C1'" N1 sing N N 214 U "C1'" "H1'" sing N N 215 U N1 C2 sing N N 216 U N1 C6 sing N N 217 U C2 O2 doub N N 218 U C2 N3 sing N N 219 U N3 C4 sing N N 220 U N3 H3 sing N N 221 U C4 O4 doub N N 222 U C4 C5 sing N N 223 U C5 C6 doub N N 224 U C5 H5 sing N N 225 U C6 H6 sing N N 226 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4QLN 'double helix' 4QLN 'a-form double helix' 4QLN 'hairpin loop' 4QLN 'mismatched base pair' 4QLN 'internal loop' 4QLN 'triple helix' 4QLN 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 5 1_555 A G 111 1_555 0.211 -0.229 -0.003 -4.268 -3.123 0.647 1 A_C5:G111_A A 5 ? A 111 ? 19 1 1 A G 6 1_555 A C 110 1_555 0.864 -0.140 -0.016 -5.423 -8.743 -1.801 2 A_G6:C110_A A 6 ? A 110 ? 19 1 1 A C 7 1_555 A G 109 1_555 0.708 -0.258 0.085 -8.580 -1.689 0.095 3 A_C7:G109_A A 7 ? A 109 ? 19 1 1 A U 8 1_555 A A 108 1_555 -0.155 -0.157 -0.235 12.962 4.174 5.794 4 A_U8:A108_A A 8 ? A 108 ? 20 1 1 A G 9 1_555 A A 107 1_555 6.506 -4.090 0.202 30.601 8.338 4.316 5 A_G9:A107_A A 9 ? A 107 ? 11 9 1 A G 19 1_555 A C 14 1_555 -1.075 -0.602 0.006 -7.144 2.377 -0.504 6 A_G19:C14_A A 19 ? A 14 ? 19 1 1 A G 20 1_555 A C 13 1_555 0.294 -0.165 -0.541 7.799 -0.082 -0.661 7 A_G20:C13_A A 20 ? A 13 ? 19 1 1 A G 21 1_555 A C 12 1_555 0.057 -0.120 -1.292 6.225 16.669 -8.217 8 A_G21:C12_A A 21 ? A 12 ? ? 1 1 A G 22 1_555 A C 106 1_555 -0.750 -0.240 -0.401 1.894 19.239 -2.955 9 A_G22:C106_A A 22 ? A 106 ? 19 1 1 A C 23 1_555 A G 105 1_555 0.361 -0.150 -0.309 3.199 2.182 1.682 10 A_C23:G105_A A 23 ? A 105 ? 19 1 1 A G 24 1_555 A C 104 1_555 0.145 -0.067 0.012 -8.394 -14.621 4.997 11 A_G24:C104_A A 24 ? A 104 ? 19 1 1 A G 25 1_555 A U 103 1_555 -2.469 -0.565 0.028 0.510 -5.318 5.501 12 A_G25:U103_A A 25 ? A 103 ? 28 1 1 A G 26 1_555 A C 102 1_555 -0.473 -0.178 -0.372 1.765 -7.658 2.089 13 A_G26:C102_A A 26 ? A 102 ? 19 1 1 A G 27 1_555 A C 101 1_555 -0.008 -0.105 0.168 -0.266 -6.048 1.013 14 A_G27:C101_A A 27 ? A 101 ? 19 1 1 A G 28 1_555 A A 100 1_555 6.935 -4.287 0.324 -6.816 -2.920 -5.186 15 A_G28:A100_A A 28 ? A 100 ? 11 9 1 A C 31 1_555 A C 97 1_555 -4.042 -1.360 0.310 7.046 -12.161 -3.140 16 A_C31:C97_A A 31 ? A 97 ? ? 1 1 A C 32 1_555 A G 96 1_555 0.107 -0.246 -0.031 4.972 -18.224 -1.494 17 A_C32:G96_A A 32 ? A 96 ? 19 1 1 A G 39 1_555 A C 94 1_555 -0.174 -0.350 -1.192 -18.225 -16.623 -1.451 18 A_G39:C94_A A 39 ? A 94 ? 19 1 1 A G 40 1_555 A C 91 1_555 0.116 -0.199 0.097 -3.713 4.871 -0.382 19 A_G40:C91_A A 40 ? A 91 ? 19 1 1 A G 41 1_555 A C 90 1_555 -0.216 -0.093 -0.203 -5.063 -2.188 0.821 20 A_G41:C90_A A 41 ? A 90 ? 19 1 1 A G 42 1_555 A C 89 1_555 -0.068 -0.210 -0.085 -5.266 1.880 0.805 21 A_G42:C89_A A 42 ? A 89 ? 19 1 1 A C 43 1_555 A G 88 1_555 0.402 -0.136 -0.476 15.066 4.957 -4.083 22 A_C43:G88_A A 43 ? A 88 ? 19 1 1 A G 44 1_555 A A 87 1_555 1.728 -5.086 0.090 19.975 -13.187 -94.280 23 A_G44:A87_A A 44 ? A 87 ? ? ? 1 A G 59 1_555 A C 54 1_555 -0.012 -0.076 -0.058 -10.799 9.085 0.084 24 A_G59:C54_A A 59 ? A 54 ? 19 1 1 A G 60 1_555 A C 53 1_555 -0.152 0.001 -0.387 -11.311 -15.160 2.699 25 A_G60:C53_A A 60 ? A 53 ? 19 1 1 A A 61 1_555 A U 52 1_555 -0.363 -0.050 0.186 -4.391 -7.425 -3.488 26 A_A61:U52_A A 61 ? A 52 ? 20 1 1 A A 62 1_555 A U 51 1_555 -0.768 -0.259 -0.298 -12.853 -9.382 -0.457 27 A_A62:U51_A A 62 ? A 51 ? 20 1 1 A G 63 1_555 A C 50 1_555 0.366 -0.153 -0.586 -22.033 -17.418 2.263 28 A_G63:C50_A A 63 ? A 50 ? 19 1 1 A A 64 1_555 A U 49 1_555 1.299 -0.148 -0.876 -22.460 -1.972 -4.786 29 A_A64:U49_A A 64 ? A 49 ? 20 1 1 A G 65 1_555 A C 48 1_555 -0.210 -0.125 0.039 0.354 -12.715 1.625 30 A_G65:C48_A A 65 ? A 48 ? 19 1 1 A U 66 1_555 A U 47 1_555 2.731 -1.757 -0.032 14.364 -19.530 17.510 31 A_U66:U47_A A 66 ? A 47 ? 16 1 1 A A 67 1_555 A G 86 1_555 -6.903 -4.364 -0.466 -4.733 -1.357 -7.159 32 A_A67:G86_A A 67 ? A 86 ? 11 10 1 A G 68 1_555 A C 85 1_555 -0.244 -0.220 0.145 1.879 -5.040 0.874 33 A_G68:C85_A A 68 ? A 85 ? 19 1 1 A G 69 1_555 A C 84 1_555 0.609 -0.085 0.013 -7.595 -10.829 -0.353 34 A_G69:C84_A A 69 ? A 84 ? 19 1 1 A G 70 1_555 A C 83 1_555 0.182 0.001 0.131 -4.645 -1.643 -2.085 35 A_G70:C83_A A 70 ? A 83 ? 19 1 1 A U 71 1_555 A A 82 1_555 -0.129 -0.015 -0.054 -1.053 -13.498 7.663 36 A_U71:A82_A A 71 ? A 82 ? 20 1 1 A U 72 1_555 A G 81 1_555 1.971 -0.609 0.233 5.329 -13.657 -1.858 37 A_U72:G81_A A 72 ? A 81 ? 28 1 1 A G 115 1_555 A C 80 1_555 -0.205 -0.210 -0.671 -9.143 -3.231 -7.112 38 A_G115:C80_A A 115 ? A 80 ? 19 1 1 A A 116 1_555 A U 79 1_555 -0.550 -0.065 -0.475 0.737 -8.078 7.766 39 A_A116:U79_A A 116 ? A 79 ? 20 1 1 A A 117 1_555 A U 78 1_555 -0.150 -0.209 -0.672 -11.429 -17.264 1.823 40 A_A117:U78_A A 117 ? A 78 ? 20 1 1 A G 118 1_555 A C 77 1_555 -0.070 -0.088 -0.408 -6.278 -7.614 1.166 41 A_G118:C77_A A 118 ? A 77 ? 19 1 1 A G 119 1_555 A C 76 1_555 0.281 -0.133 -0.519 -8.895 -9.686 1.049 42 A_G119:C76_A A 119 ? A 76 ? 19 1 1 A A 120 1_555 A U 75 1_555 0.206 -0.105 0.092 1.006 -4.760 3.021 43 A_A120:U75_A A 120 ? A 75 ? 20 1 1 A G 121 1_555 A C 74 1_555 0.023 -0.182 -1.044 -24.924 -29.580 0.605 44 A_G121:C74_A A 121 ? A 74 ? 19 1 1 A A 73 1_555 A U 112 1_555 1.123 -3.551 -1.668 21.253 -7.109 73.032 45 A_A73:U112_A A 73 ? A 112 ? 23 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 5 1_555 A G 111 1_555 A G 6 1_555 A C 110 1_555 0.565 -2.368 3.192 1.441 7.041 29.801 -5.730 -0.814 2.601 13.446 -2.751 30.636 1 AA_C5G6:C110G111_AA A 5 ? A 111 ? A 6 ? A 110 ? 1 A G 6 1_555 A C 110 1_555 A C 7 1_555 A G 109 1_555 -1.316 -2.663 3.218 -1.906 5.142 24.264 -7.600 2.531 2.698 12.037 4.462 24.867 2 AA_G6C7:G109C110_AA A 6 ? A 110 ? A 7 ? A 109 ? 1 A C 7 1_555 A G 109 1_555 A U 8 1_555 A A 108 1_555 -0.259 -1.522 2.819 -0.790 3.273 23.353 -4.633 0.414 2.591 8.032 1.938 23.591 3 AA_C7U8:A108G109_AA A 7 ? A 109 ? A 8 ? A 108 ? 1 A U 8 1_555 A A 108 1_555 A G 9 1_555 A A 107 1_555 0.023 -0.227 3.071 -2.038 7.357 55.280 -0.639 -0.135 3.018 7.887 2.185 55.763 4 AA_U8G9:A107A108_AA A 8 ? A 108 ? A 9 ? A 107 ? 1 A G 19 1_555 A C 14 1_555 A G 20 1_555 A C 13 1_555 0.311 -1.188 2.851 3.972 2.757 30.726 -2.671 0.075 2.754 5.162 -7.439 31.095 5 AA_G19G20:C13C14_AA A 19 ? A 14 ? A 20 ? A 13 ? 1 A G 20 1_555 A C 13 1_555 A G 21 1_555 A C 12 1_555 0.394 -1.556 3.706 5.486 7.222 29.157 -4.523 0.441 3.254 13.927 -10.579 30.506 6 AA_G20G21:C12C13_AA A 20 ? A 13 ? A 21 ? A 12 ? 1 A G 21 1_555 A C 12 1_555 A G 22 1_555 A C 106 1_555 2.041 -1.143 4.063 -8.306 -13.813 46.979 -0.092 -3.202 3.845 -16.760 10.079 49.518 7 AA_G21G22:C106C12_AA A 21 ? A 12 ? A 22 ? A 106 ? 1 A G 22 1_555 A C 106 1_555 A C 23 1_555 A G 105 1_555 -0.390 -1.870 3.258 -3.739 12.470 33.531 -4.649 0.149 2.458 20.671 6.199 35.902 8 AA_G22C23:G105C106_AA A 22 ? A 106 ? A 23 ? A 105 ? 1 A C 23 1_555 A G 105 1_555 A G 24 1_555 A C 104 1_555 0.378 -1.716 3.774 -0.844 0.819 31.600 -3.323 -0.872 3.719 1.503 1.549 31.622 9 AA_C23G24:C104G105_AA A 23 ? A 105 ? A 24 ? A 104 ? 1 A G 24 1_555 A C 104 1_555 A G 25 1_555 A U 103 1_555 0.060 -2.240 2.883 -2.829 2.066 19.080 -7.512 -1.361 2.592 6.167 8.444 19.396 10 AA_G24G25:U103C104_AA A 24 ? A 104 ? A 25 ? A 103 ? 1 A G 25 1_555 A U 103 1_555 A G 26 1_555 A C 102 1_555 -0.131 -1.512 3.379 1.687 3.650 36.383 -2.915 0.443 3.208 5.824 -2.691 36.597 11 AA_G25G26:C102U103_AA A 25 ? A 103 ? A 26 ? A 102 ? 1 A G 26 1_555 A C 102 1_555 A G 27 1_555 A C 101 1_555 0.375 -2.121 3.293 -2.548 0.129 30.132 -4.092 -1.236 3.242 0.248 4.890 30.237 12 AA_G26G27:C101C102_AA A 26 ? A 102 ? A 27 ? A 101 ? 1 A G 27 1_555 A C 101 1_555 A G 28 1_555 A A 100 1_555 -0.765 -1.001 3.548 2.399 5.837 63.792 -1.212 0.832 3.427 5.509 -2.264 64.071 13 AA_G27G28:A100C101_AA A 27 ? A 101 ? A 28 ? A 100 ? 1 A C 31 1_555 A C 97 1_555 A C 32 1_555 A G 96 1_555 0.262 -0.986 3.553 -0.138 4.419 47.066 -1.616 -0.339 3.452 5.519 0.172 47.262 14 AA_C31C32:G96C97_AA A 31 ? A 97 ? A 32 ? A 96 ? 1 A G 39 1_555 A C 94 1_555 A G 40 1_555 A C 91 1_555 3.576 -0.829 2.736 -5.150 -2.367 50.681 -0.833 -4.438 2.420 -2.755 5.994 50.976 15 AA_G39G40:C91C94_AA A 39 ? A 94 ? A 40 ? A 91 ? 1 A G 40 1_555 A C 91 1_555 A G 41 1_555 A C 90 1_555 1.070 -2.536 3.505 4.027 0.299 22.321 -6.568 -1.123 3.605 0.765 -10.294 22.678 16 AA_G40G41:C90C91_AA A 40 ? A 91 ? A 41 ? A 90 ? 1 A G 41 1_555 A C 90 1_555 A G 42 1_555 A C 89 1_555 -0.468 -2.186 3.268 -2.097 4.022 32.070 -4.604 0.482 3.002 7.235 3.773 32.381 17 AA_G41G42:C89C90_AA A 41 ? A 90 ? A 42 ? A 89 ? 1 A G 42 1_555 A C 89 1_555 A C 43 1_555 A G 88 1_555 -0.418 -1.600 3.108 3.266 -0.669 27.818 -3.154 1.595 3.076 -1.385 -6.762 28.013 18 AA_G42C43:G88C89_AA A 42 ? A 89 ? A 43 ? A 88 ? 1 A C 43 1_555 A G 88 1_555 A G 44 1_555 A A 87 1_555 0.577 -1.410 3.425 4.049 11.988 98.734 -1.122 -0.312 3.301 7.875 -2.660 99.332 19 AA_C43G44:A87G88_AA A 43 ? A 88 ? A 44 ? A 87 ? 1 A G 59 1_555 A C 54 1_555 A G 60 1_555 A C 53 1_555 -0.097 -1.983 3.372 3.577 8.311 28.888 -5.396 0.872 2.680 16.167 -6.958 30.243 20 AA_G59G60:C53C54_AA A 59 ? A 54 ? A 60 ? A 53 ? 1 A G 60 1_555 A C 53 1_555 A A 61 1_555 A U 52 1_555 0.077 -1.549 3.110 -3.571 -0.430 32.117 -2.711 -0.740 3.104 -0.775 6.429 32.313 21 AA_G60A61:U52C53_AA A 60 ? A 53 ? A 61 ? A 52 ? 1 A A 61 1_555 A U 52 1_555 A A 62 1_555 A U 51 1_555 0.822 -2.399 3.422 8.153 5.725 28.558 -5.779 0.099 3.010 11.184 -15.927 30.212 22 AA_A61A62:U51U52_AA A 61 ? A 52 ? A 62 ? A 51 ? 1 A A 62 1_555 A U 51 1_555 A G 63 1_555 A C 50 1_555 -0.281 -1.468 3.573 3.795 8.290 38.721 -3.166 0.873 3.164 12.297 -5.628 39.739 23 AA_A62G63:C50U51_AA A 62 ? A 51 ? A 63 ? A 50 ? 1 A G 63 1_555 A C 50 1_555 A A 64 1_555 A U 49 1_555 -0.063 -0.757 3.301 5.366 0.916 38.011 -1.266 0.769 3.244 1.398 -8.186 38.385 24 AA_G63A64:U49C50_AA A 63 ? A 50 ? A 64 ? A 49 ? 1 A A 64 1_555 A U 49 1_555 A G 65 1_555 A C 48 1_555 0.817 -1.903 2.699 -7.382 10.846 18.166 -7.439 -3.832 1.014 29.820 20.296 22.376 25 AA_A64G65:C48U49_AA A 64 ? A 49 ? A 65 ? A 48 ? 1 A G 65 1_555 A C 48 1_555 A U 66 1_555 A U 47 1_555 0.472 -0.380 2.924 1.510 3.608 45.877 -0.763 -0.488 2.901 4.618 -1.933 46.034 26 AA_G65U66:U47C48_AA A 65 ? A 48 ? A 66 ? A 47 ? 1 A U 66 1_555 A U 47 1_555 A A 67 1_555 A G 86 1_555 0.753 -0.376 3.724 -4.638 6.945 23.824 -3.099 -3.219 3.282 16.200 10.817 25.225 27 AA_U66A67:G86U47_AA A 66 ? A 47 ? A 67 ? A 86 ? 1 A A 67 1_555 A G 86 1_555 A G 68 1_555 A C 85 1_555 1.017 -0.921 3.226 -2.136 -2.022 59.163 -0.830 -1.136 3.218 -2.047 2.162 59.229 28 AA_A67G68:C85G86_AA A 67 ? A 86 ? A 68 ? A 85 ? 1 A G 68 1_555 A C 85 1_555 A G 69 1_555 A C 84 1_555 0.528 -2.486 3.260 3.738 7.582 34.547 -5.099 -0.359 2.712 12.535 -6.180 35.536 29 AA_G68G69:C84C85_AA A 68 ? A 85 ? A 69 ? A 84 ? 1 A G 69 1_555 A C 84 1_555 A G 70 1_555 A C 83 1_555 -1.083 -2.544 3.041 -2.219 3.429 23.346 -7.206 1.984 2.733 8.392 5.430 23.696 30 AA_G69G70:C83C84_AA A 69 ? A 84 ? A 70 ? A 83 ? 1 A G 70 1_555 A C 83 1_555 A U 71 1_555 A A 82 1_555 0.105 -1.540 3.141 2.679 9.765 29.137 -4.591 0.266 2.505 18.711 -5.133 30.810 31 AA_G70U71:A82C83_AA A 70 ? A 83 ? A 71 ? A 82 ? 1 A U 71 1_555 A A 82 1_555 A U 72 1_555 A G 81 1_555 -0.618 -1.229 3.121 -5.308 5.738 38.743 -2.455 0.327 2.972 8.544 7.904 39.494 32 AA_U71U72:G81A82_AA A 71 ? A 82 ? A 72 ? A 81 ? 1 A U 72 1_555 A G 81 1_555 A G 115 1_555 A C 80 1_555 -2.318 -1.258 3.253 1.717 15.669 35.011 -3.695 3.728 2.384 24.566 -2.692 38.295 33 AA_U72G115:C80G81_AA A 72 ? A 81 ? A 115 ? A 80 ? 1 A G 115 1_555 A C 80 1_555 A A 116 1_555 A U 79 1_555 0.894 -1.885 3.318 -1.530 1.764 26.744 -4.509 -2.316 3.135 3.804 3.301 26.844 34 AA_G115A116:U79C80_AA A 115 ? A 80 ? A 116 ? A 79 ? 1 A A 116 1_555 A U 79 1_555 A A 117 1_555 A U 78 1_555 -1.000 -1.809 3.620 -2.971 18.151 29.664 -5.726 1.230 2.260 31.887 5.219 34.795 35 AA_A116A117:U78U79_AA A 116 ? A 79 ? A 117 ? A 78 ? 1 A A 117 1_555 A U 78 1_555 A G 118 1_555 A C 77 1_555 -0.095 -1.461 3.142 -4.063 8.009 28.896 -4.270 -0.562 2.640 15.581 7.905 30.231 36 AA_A117G118:C77U78_AA A 117 ? A 78 ? A 118 ? A 77 ? 1 A G 118 1_555 A C 77 1_555 A G 119 1_555 A C 76 1_555 -0.089 -1.474 3.227 1.660 13.047 32.984 -4.156 0.367 2.478 21.925 -2.790 35.442 37 AA_G118G119:C76C77_AA A 118 ? A 77 ? A 119 ? A 76 ? 1 A G 119 1_555 A C 76 1_555 A A 120 1_555 A U 75 1_555 0.649 -1.425 3.012 -2.880 7.409 27.203 -4.378 -1.897 2.465 15.341 5.964 28.319 38 AA_G119A120:U75C76_AA A 119 ? A 76 ? A 120 ? A 75 ? 1 A A 120 1_555 A U 75 1_555 A G 121 1_555 A C 74 1_555 0.478 -2.025 4.090 13.116 15.062 33.341 -5.201 1.148 2.931 23.787 -20.713 38.719 39 AA_A120G121:C74U75_AA A 120 ? A 75 ? A 121 ? A 74 ? # _atom_sites.entry_id 4QLN _atom_sites.fract_transf_matrix[1][1] 0.012841 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011488 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006918 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_