data_4QQQ # _entry.id 4QQQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QQQ pdb_00004qqq 10.2210/pdb4qqq/pdb RCSB RCSB086393 ? ? WWPDB D_1000086393 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4QQA _pdbx_database_related.details 'The same protein complexed with mannose' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QQQ _pdbx_database_status.recvd_initial_deposition_date 2014-06-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Park, S.A.' 1 'Lee, K.S.' 2 # _citation.id primary _citation.title 'Crystal structure of pneumolysin from Streptococcus pneumoniae, in complex with mannose as a component of cell membrane' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Park, S.A.' 1 ? primary 'Lee, K.S.' 2 ? # _cell.entry_id 4QQQ _cell.length_a 24.679 _cell.length_b 157.454 _cell.length_c 211.325 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QQQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Pneumolysin 54351.668 1 ? ? ? ? 2 non-polymer man alpha-D-mannopyranose 180.156 2 ? ? ? ? 3 water nat water 18.015 121 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHSSGLVPRGSHMANKAVNDFILAMNYDKKKLLTHQGESIENRFIKEGNQLPDEFVVIERKKRSLSTNTSDISVTATND SRLYPGALLVVDETLLENNPTLLAVDRAPMTYSIDLPGLASSDSFLQVEDPSNSSVRGAVNDLLAKWHQDYGQVNNVPAR MQYEKITAHSMEQLKVKFGSDFEKTGNSLDIDFNSVHSGEKQIQIVNFKQIYYTVSVDAVKNPGDVFQDTVTVEDLKQRG ISAERPLVYISSVAYGRQVYLKLETTSKSDEVEAAFEALIKGVKVAPQTEWKQILDNTEVKAVILGGDPSSGARVVTGKV DMVEDLIQEGSRFTADHPGLPISYTTSFLRDNVVATFQNSTDYVETKVTAYRNGDLLLDHSGAYVAQYYITWNELSYDHQ GKEVLTPKAWDRNGQDLTAHFTTSIPLKGNVRNLSVKIRECTGLAWEWWRTVYEKTDLPLVRKRTISIWGTTLYPQVEDK VEND ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHSSGLVPRGSHMANKAVNDFILAMNYDKKKLLTHQGESIENRFIKEGNQLPDEFVVIERKKRSLSTNTSDISVTATND SRLYPGALLVVDETLLENNPTLLAVDRAPMTYSIDLPGLASSDSFLQVEDPSNSSVRGAVNDLLAKWHQDYGQVNNVPAR MQYEKITAHSMEQLKVKFGSDFEKTGNSLDIDFNSVHSGEKQIQIVNFKQIYYTVSVDAVKNPGDVFQDTVTVEDLKQRG ISAERPLVYISSVAYGRQVYLKLETTSKSDEVEAAFEALIKGVKVAPQTEWKQILDNTEVKAVILGGDPSSGARVVTGKV DMVEDLIQEGSRFTADHPGLPISYTTSFLRDNVVATFQNSTDYVETKVTAYRNGDLLLDHSGAYVAQYYITWNELSYDHQ GKEVLTPKAWDRNGQDLTAHFTTSIPLKGNVRNLSVKIRECTGLAWEWWRTVYEKTDLPLVRKRTISIWGTTLYPQVEDK VEND ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 SER n 1 5 SER n 1 6 GLY n 1 7 LEU n 1 8 VAL n 1 9 PRO n 1 10 ARG n 1 11 GLY n 1 12 SER n 1 13 HIS n 1 14 MET n 1 15 ALA n 1 16 ASN n 1 17 LYS n 1 18 ALA n 1 19 VAL n 1 20 ASN n 1 21 ASP n 1 22 PHE n 1 23 ILE n 1 24 LEU n 1 25 ALA n 1 26 MET n 1 27 ASN n 1 28 TYR n 1 29 ASP n 1 30 LYS n 1 31 LYS n 1 32 LYS n 1 33 LEU n 1 34 LEU n 1 35 THR n 1 36 HIS n 1 37 GLN n 1 38 GLY n 1 39 GLU n 1 40 SER n 1 41 ILE n 1 42 GLU n 1 43 ASN n 1 44 ARG n 1 45 PHE n 1 46 ILE n 1 47 LYS n 1 48 GLU n 1 49 GLY n 1 50 ASN n 1 51 GLN n 1 52 LEU n 1 53 PRO n 1 54 ASP n 1 55 GLU n 1 56 PHE n 1 57 VAL n 1 58 VAL n 1 59 ILE n 1 60 GLU n 1 61 ARG n 1 62 LYS n 1 63 LYS n 1 64 ARG n 1 65 SER n 1 66 LEU n 1 67 SER n 1 68 THR n 1 69 ASN n 1 70 THR n 1 71 SER n 1 72 ASP n 1 73 ILE n 1 74 SER n 1 75 VAL n 1 76 THR n 1 77 ALA n 1 78 THR n 1 79 ASN n 1 80 ASP n 1 81 SER n 1 82 ARG n 1 83 LEU n 1 84 TYR n 1 85 PRO n 1 86 GLY n 1 87 ALA n 1 88 LEU n 1 89 LEU n 1 90 VAL n 1 91 VAL n 1 92 ASP n 1 93 GLU n 1 94 THR n 1 95 LEU n 1 96 LEU n 1 97 GLU n 1 98 ASN n 1 99 ASN n 1 100 PRO n 1 101 THR n 1 102 LEU n 1 103 LEU n 1 104 ALA n 1 105 VAL n 1 106 ASP n 1 107 ARG n 1 108 ALA n 1 109 PRO n 1 110 MET n 1 111 THR n 1 112 TYR n 1 113 SER n 1 114 ILE n 1 115 ASP n 1 116 LEU n 1 117 PRO n 1 118 GLY n 1 119 LEU n 1 120 ALA n 1 121 SER n 1 122 SER n 1 123 ASP n 1 124 SER n 1 125 PHE n 1 126 LEU n 1 127 GLN n 1 128 VAL n 1 129 GLU n 1 130 ASP n 1 131 PRO n 1 132 SER n 1 133 ASN n 1 134 SER n 1 135 SER n 1 136 VAL n 1 137 ARG n 1 138 GLY n 1 139 ALA n 1 140 VAL n 1 141 ASN n 1 142 ASP n 1 143 LEU n 1 144 LEU n 1 145 ALA n 1 146 LYS n 1 147 TRP n 1 148 HIS n 1 149 GLN n 1 150 ASP n 1 151 TYR n 1 152 GLY n 1 153 GLN n 1 154 VAL n 1 155 ASN n 1 156 ASN n 1 157 VAL n 1 158 PRO n 1 159 ALA n 1 160 ARG n 1 161 MET n 1 162 GLN n 1 163 TYR n 1 164 GLU n 1 165 LYS n 1 166 ILE n 1 167 THR n 1 168 ALA n 1 169 HIS n 1 170 SER n 1 171 MET n 1 172 GLU n 1 173 GLN n 1 174 LEU n 1 175 LYS n 1 176 VAL n 1 177 LYS n 1 178 PHE n 1 179 GLY n 1 180 SER n 1 181 ASP n 1 182 PHE n 1 183 GLU n 1 184 LYS n 1 185 THR n 1 186 GLY n 1 187 ASN n 1 188 SER n 1 189 LEU n 1 190 ASP n 1 191 ILE n 1 192 ASP n 1 193 PHE n 1 194 ASN n 1 195 SER n 1 196 VAL n 1 197 HIS n 1 198 SER n 1 199 GLY n 1 200 GLU n 1 201 LYS n 1 202 GLN n 1 203 ILE n 1 204 GLN n 1 205 ILE n 1 206 VAL n 1 207 ASN n 1 208 PHE n 1 209 LYS n 1 210 GLN n 1 211 ILE n 1 212 TYR n 1 213 TYR n 1 214 THR n 1 215 VAL n 1 216 SER n 1 217 VAL n 1 218 ASP n 1 219 ALA n 1 220 VAL n 1 221 LYS n 1 222 ASN n 1 223 PRO n 1 224 GLY n 1 225 ASP n 1 226 VAL n 1 227 PHE n 1 228 GLN n 1 229 ASP n 1 230 THR n 1 231 VAL n 1 232 THR n 1 233 VAL n 1 234 GLU n 1 235 ASP n 1 236 LEU n 1 237 LYS n 1 238 GLN n 1 239 ARG n 1 240 GLY n 1 241 ILE n 1 242 SER n 1 243 ALA n 1 244 GLU n 1 245 ARG n 1 246 PRO n 1 247 LEU n 1 248 VAL n 1 249 TYR n 1 250 ILE n 1 251 SER n 1 252 SER n 1 253 VAL n 1 254 ALA n 1 255 TYR n 1 256 GLY n 1 257 ARG n 1 258 GLN n 1 259 VAL n 1 260 TYR n 1 261 LEU n 1 262 LYS n 1 263 LEU n 1 264 GLU n 1 265 THR n 1 266 THR n 1 267 SER n 1 268 LYS n 1 269 SER n 1 270 ASP n 1 271 GLU n 1 272 VAL n 1 273 GLU n 1 274 ALA n 1 275 ALA n 1 276 PHE n 1 277 GLU n 1 278 ALA n 1 279 LEU n 1 280 ILE n 1 281 LYS n 1 282 GLY n 1 283 VAL n 1 284 LYS n 1 285 VAL n 1 286 ALA n 1 287 PRO n 1 288 GLN n 1 289 THR n 1 290 GLU n 1 291 TRP n 1 292 LYS n 1 293 GLN n 1 294 ILE n 1 295 LEU n 1 296 ASP n 1 297 ASN n 1 298 THR n 1 299 GLU n 1 300 VAL n 1 301 LYS n 1 302 ALA n 1 303 VAL n 1 304 ILE n 1 305 LEU n 1 306 GLY n 1 307 GLY n 1 308 ASP n 1 309 PRO n 1 310 SER n 1 311 SER n 1 312 GLY n 1 313 ALA n 1 314 ARG n 1 315 VAL n 1 316 VAL n 1 317 THR n 1 318 GLY n 1 319 LYS n 1 320 VAL n 1 321 ASP n 1 322 MET n 1 323 VAL n 1 324 GLU n 1 325 ASP n 1 326 LEU n 1 327 ILE n 1 328 GLN n 1 329 GLU n 1 330 GLY n 1 331 SER n 1 332 ARG n 1 333 PHE n 1 334 THR n 1 335 ALA n 1 336 ASP n 1 337 HIS n 1 338 PRO n 1 339 GLY n 1 340 LEU n 1 341 PRO n 1 342 ILE n 1 343 SER n 1 344 TYR n 1 345 THR n 1 346 THR n 1 347 SER n 1 348 PHE n 1 349 LEU n 1 350 ARG n 1 351 ASP n 1 352 ASN n 1 353 VAL n 1 354 VAL n 1 355 ALA n 1 356 THR n 1 357 PHE n 1 358 GLN n 1 359 ASN n 1 360 SER n 1 361 THR n 1 362 ASP n 1 363 TYR n 1 364 VAL n 1 365 GLU n 1 366 THR n 1 367 LYS n 1 368 VAL n 1 369 THR n 1 370 ALA n 1 371 TYR n 1 372 ARG n 1 373 ASN n 1 374 GLY n 1 375 ASP n 1 376 LEU n 1 377 LEU n 1 378 LEU n 1 379 ASP n 1 380 HIS n 1 381 SER n 1 382 GLY n 1 383 ALA n 1 384 TYR n 1 385 VAL n 1 386 ALA n 1 387 GLN n 1 388 TYR n 1 389 TYR n 1 390 ILE n 1 391 THR n 1 392 TRP n 1 393 ASN n 1 394 GLU n 1 395 LEU n 1 396 SER n 1 397 TYR n 1 398 ASP n 1 399 HIS n 1 400 GLN n 1 401 GLY n 1 402 LYS n 1 403 GLU n 1 404 VAL n 1 405 LEU n 1 406 THR n 1 407 PRO n 1 408 LYS n 1 409 ALA n 1 410 TRP n 1 411 ASP n 1 412 ARG n 1 413 ASN n 1 414 GLY n 1 415 GLN n 1 416 ASP n 1 417 LEU n 1 418 THR n 1 419 ALA n 1 420 HIS n 1 421 PHE n 1 422 THR n 1 423 THR n 1 424 SER n 1 425 ILE n 1 426 PRO n 1 427 LEU n 1 428 LYS n 1 429 GLY n 1 430 ASN n 1 431 VAL n 1 432 ARG n 1 433 ASN n 1 434 LEU n 1 435 SER n 1 436 VAL n 1 437 LYS n 1 438 ILE n 1 439 ARG n 1 440 GLU n 1 441 CYS n 1 442 THR n 1 443 GLY n 1 444 LEU n 1 445 ALA n 1 446 TRP n 1 447 GLU n 1 448 TRP n 1 449 TRP n 1 450 ARG n 1 451 THR n 1 452 VAL n 1 453 TYR n 1 454 GLU n 1 455 LYS n 1 456 THR n 1 457 ASP n 1 458 LEU n 1 459 PRO n 1 460 LEU n 1 461 VAL n 1 462 ARG n 1 463 LYS n 1 464 ARG n 1 465 THR n 1 466 ILE n 1 467 SER n 1 468 ILE n 1 469 TRP n 1 470 GLY n 1 471 THR n 1 472 THR n 1 473 LEU n 1 474 TYR n 1 475 PRO n 1 476 GLN n 1 477 VAL n 1 478 GLU n 1 479 ASP n 1 480 LYS n 1 481 VAL n 1 482 GLU n 1 483 ASN n 1 484 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ply _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1313 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2XU26_STREE _struct_ref.pdbx_db_accession Q2XU26 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANKAVNDFILAMNYDKKKLLTHQGESIENRFIKEGNQLPDEFVVIERKKRSLSTNTSDISVTATNDSRLYPGALLVVDE TLLENNPTLLAVDRAPMTYSIDLPGLASSDSFLQVEDPSNSSVRGAVNDLLAKWHQDYGQVNNVPARMQYEKITAHSMEQ LKVKFGSDFEKTGNSLDIDFNSVHSGEKQIQIVNFKQIYYTVSVDAVKNPGDVFQDTVTVEDLKQRGISAERPLVYISSV AYGRQVYLKLETTSKSDEVEAAFEALIKGVKVAPQTEWKQILDNTEVKAVILGGDPSSGARVVTGKVDMVEDLIQEGSRF TADHPGLPISYTTSFLRDNVVATFQNSTDYVETKVTAYRNGDLLLDHSGAYVAQYYITWNELSYDHQGKEVLTPKAWDRN GQDLTAHFTTSIPLKGNVRNLSVKIRECTGLAWEWWRTVYEKTDLPLVRKRTISIWGTTLYPQVEDKVEND ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QQQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 14 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 484 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2XU26 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 471 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 471 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QQQ HIS A 1 ? UNP Q2XU26 ? ? 'expression tag' -12 1 1 4QQQ HIS A 2 ? UNP Q2XU26 ? ? 'expression tag' -11 2 1 4QQQ HIS A 3 ? UNP Q2XU26 ? ? 'expression tag' -10 3 1 4QQQ SER A 4 ? UNP Q2XU26 ? ? 'expression tag' -9 4 1 4QQQ SER A 5 ? UNP Q2XU26 ? ? 'expression tag' -8 5 1 4QQQ GLY A 6 ? UNP Q2XU26 ? ? 'expression tag' -7 6 1 4QQQ LEU A 7 ? UNP Q2XU26 ? ? 'expression tag' -6 7 1 4QQQ VAL A 8 ? UNP Q2XU26 ? ? 'expression tag' -5 8 1 4QQQ PRO A 9 ? UNP Q2XU26 ? ? 'expression tag' -4 9 1 4QQQ ARG A 10 ? UNP Q2XU26 ? ? 'expression tag' -3 10 1 4QQQ GLY A 11 ? UNP Q2XU26 ? ? 'expression tag' -2 11 1 4QQQ SER A 12 ? UNP Q2XU26 ? ? 'expression tag' -1 12 1 4QQQ HIS A 13 ? UNP Q2XU26 ? ? 'expression tag' 0 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4QQQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.78 _exptl_crystal.density_percent_sol 67.43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1M Bicine-Tris, 30% EDO_P8K, 0.12M monosaccharides, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2010-09-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2398 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.2398 # _reflns.entry_id 4QQQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 26806 _reflns.number_all ? _reflns.percent_possible_obs 88.4 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value 0.079 _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.B_iso_Wilson_estimate 34.93 _reflns.pdbx_redundancy 7.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 74.8 _reflns_shell.Rmerge_I_obs 0.274 _reflns_shell.pdbx_Rsym_value 0.318 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2154 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4QQQ _refine.ls_number_reflns_obs 26691 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.49 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.820 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 88.71 _refine.ls_R_factor_obs 0.2154 _refine.ls_R_factor_all 0.2154 _refine.ls_R_factor_R_work 0.2125 _refine.ls_R_factor_R_free 0.2709 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1335 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 43.4 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 4QQA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.pdbx_overall_phase_error 26.29 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3822 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 3967 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 40.820 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 3924 ? 'X-RAY DIFFRACTION' f_angle_d 1.328 ? ? 5334 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.245 ? ? 1432 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.093 ? ? 612 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 685 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 10 2.5001 2.5894 2037 0.2775 75.00 0.3516 . . 103 . . 2037 . 'X-RAY DIFFRACTION' 10 2.5894 2.6931 2178 0.2651 77.00 0.3097 . . 120 . . 2178 . 'X-RAY DIFFRACTION' 10 2.6931 2.8156 2149 0.2497 77.00 0.3676 . . 111 . . 2149 . 'X-RAY DIFFRACTION' 10 2.8156 2.9640 2295 0.2387 83.00 0.2790 . . 119 . . 2295 . 'X-RAY DIFFRACTION' 10 2.9640 3.1497 2510 0.2290 88.00 0.2668 . . 135 . . 2510 . 'X-RAY DIFFRACTION' 10 3.1497 3.3927 2637 0.2318 94.00 0.2688 . . 140 . . 2631 . 'X-RAY DIFFRACTION' 10 3.3927 3.7339 2730 0.2005 96.00 0.2799 . . 143 . . 2730 . 'X-RAY DIFFRACTION' 10 3.7339 4.2738 2839 0.1853 98.00 0.2533 . . 148 . . 2839 . 'X-RAY DIFFRACTION' 10 4.2738 5.3825 2869 0.1784 98.00 0.2112 . . 151 . . 2869 . 'X-RAY DIFFRACTION' 10 5.3825 40.8254 3112 0.2159 99.00 0.2905 . . 165 . . 3112 . # _struct.entry_id 4QQQ _struct.title 'Crystal structure of pneumolysin from Streptococcus pneumoniae, in complex with mannose as a component of cell membrane' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QQQ _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'PLY, Cholesterol-dependent Cytolysin, Cholesterol/mannose binding, TOXIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? ALA A 25 ? SER A -1 ALA A 12 1 ? 14 HELX_P HELX_P2 2 ASP A 29 ? LEU A 34 ? ASP A 16 LEU A 21 1 ? 6 HELX_P HELX_P3 3 ASP A 92 ? GLU A 97 ? ASP A 79 GLU A 84 1 ? 6 HELX_P HELX_P4 4 SER A 121 ? ASP A 123 ? SER A 108 ASP A 110 5 ? 3 HELX_P HELX_P5 5 SER A 132 ? ASP A 150 ? SER A 119 ASP A 137 1 ? 19 HELX_P HELX_P6 6 SER A 170 ? GLY A 179 ? SER A 157 GLY A 166 1 ? 10 HELX_P HELX_P7 7 PHE A 182 ? ASN A 187 ? PHE A 169 ASN A 174 1 ? 6 HELX_P HELX_P8 8 PHE A 193 ? SER A 198 ? PHE A 180 SER A 185 1 ? 6 HELX_P HELX_P9 9 ASN A 222 ? PHE A 227 ? ASN A 209 PHE A 214 5 ? 6 HELX_P HELX_P10 10 THR A 232 ? ARG A 239 ? THR A 219 ARG A 226 1 ? 8 HELX_P HELX_P11 11 VAL A 272 ? GLY A 282 ? VAL A 259 GLY A 269 1 ? 11 HELX_P HELX_P12 12 THR A 289 ? ASP A 296 ? THR A 276 ASP A 283 1 ? 8 HELX_P HELX_P13 13 LYS A 319 ? MET A 322 ? LYS A 306 MET A 309 5 ? 4 HELX_P HELX_P14 14 VAL A 323 ? GLY A 330 ? VAL A 310 GLY A 317 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 157 A . ? VAL 144 A PRO 158 A ? PRO 145 A 1 -4.51 2 ALA 419 A . ? ALA 406 A HIS 420 A ? HIS 407 A 1 -3.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 6 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 35 ? GLN A 37 ? THR A 22 GLN A 24 A 2 PHE A 357 ? ARG A 372 ? PHE A 344 ARG A 359 A 3 GLU A 55 ? THR A 70 ? GLU A 42 THR A 57 A 4 GLU A 48 ? LEU A 52 ? GLU A 35 LEU A 39 B 1 ASP A 72 ? SER A 74 ? ASP A 59 SER A 61 B 2 LEU A 340 ? PHE A 348 ? LEU A 327 PHE A 335 B 3 LEU A 247 ? THR A 265 ? LEU A 234 THR A 252 B 4 LEU A 88 ? VAL A 90 ? LEU A 75 VAL A 77 C 1 LEU A 88 ? VAL A 90 ? LEU A 75 VAL A 77 C 2 LEU A 247 ? THR A 265 ? LEU A 234 THR A 252 C 3 GLN A 202 ? VAL A 217 ? GLN A 189 VAL A 204 C 4 ARG A 160 ? THR A 167 ? ARG A 147 THR A 154 D 1 PHE A 125 ? VAL A 128 ? PHE A 112 VAL A 115 D 2 MET A 110 ? ILE A 114 ? MET A 97 ILE A 101 D 3 GLN A 202 ? VAL A 217 ? GLN A 189 VAL A 204 D 4 LEU A 247 ? THR A 265 ? LEU A 234 THR A 252 D 5 THR A 298 ? LEU A 305 ? THR A 285 LEU A 292 D 6 GLY A 312 ? ARG A 314 ? GLY A 299 ARG A 301 E 1 PHE A 421 ? LEU A 427 ? PHE A 408 LEU A 414 E 2 GLY A 374 ? HIS A 380 ? GLY A 361 HIS A 367 E 3 LYS A 463 ? GLY A 470 ? LYS A 450 GLY A 457 E 4 PRO A 475 ? GLU A 482 ? PRO A 462 GLU A 469 F 1 LYS A 402 ? ALA A 409 ? LYS A 389 ALA A 396 F 2 ALA A 386 ? ASP A 398 ? ALA A 373 ASP A 385 F 3 VAL A 431 ? LEU A 444 ? VAL A 418 LEU A 431 F 4 GLU A 447 ? THR A 456 ? GLU A 434 THR A 443 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 36 ? N HIS A 23 O GLN A 358 ? O GLN A 345 A 2 3 O PHE A 357 ? O PHE A 344 N THR A 70 ? N THR A 57 A 3 4 O ILE A 59 ? O ILE A 46 N GLU A 48 ? N GLU A 35 B 1 2 N ILE A 73 ? N ILE A 60 O TYR A 344 ? O TYR A 331 B 2 3 O SER A 343 ? O SER A 330 N ALA A 254 ? N ALA A 241 B 3 4 O VAL A 248 ? O VAL A 235 N LEU A 89 ? N LEU A 76 C 1 2 N LEU A 89 ? N LEU A 76 O VAL A 248 ? O VAL A 235 C 2 3 O ARG A 257 ? O ARG A 244 N GLN A 210 ? N GLN A 197 C 3 4 O ASN A 207 ? O ASN A 194 N GLU A 164 ? N GLU A 151 D 1 2 O LEU A 126 ? O LEU A 113 N TYR A 112 ? N TYR A 99 D 2 3 N SER A 113 ? N SER A 100 O SER A 216 ? O SER A 203 D 3 4 N GLN A 210 ? N GLN A 197 O ARG A 257 ? O ARG A 244 D 4 5 N GLU A 264 ? N GLU A 251 O GLU A 299 ? O GLU A 286 D 5 6 N ILE A 304 ? N ILE A 291 O ALA A 313 ? O ALA A 300 E 1 2 O ILE A 425 ? O ILE A 412 N LEU A 376 ? N LEU A 363 E 2 3 N LEU A 377 ? N LEU A 364 O ARG A 464 ? O ARG A 451 E 3 4 N THR A 465 ? N THR A 452 O LYS A 480 ? O LYS A 467 F 1 2 O VAL A 404 ? O VAL A 391 N SER A 396 ? N SER A 383 F 2 3 N ASN A 393 ? N ASN A 380 O ARG A 432 ? O ARG A 419 F 3 4 N GLU A 440 ? N GLU A 427 O ARG A 450 ? O ARG A 437 # _database_PDB_matrix.entry_id 4QQQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4QQQ _atom_sites.fract_transf_matrix[1][1] 0.040520 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006351 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004732 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -12 -12 HIS HIS A . n A 1 2 HIS 2 -11 -11 HIS HIS A . n A 1 3 HIS 3 -10 -10 HIS HIS A . n A 1 4 SER 4 -9 -9 SER SER A . n A 1 5 SER 5 -8 -8 SER SER A . n A 1 6 GLY 6 -7 -7 GLY GLY A . n A 1 7 LEU 7 -6 -6 LEU LEU A . n A 1 8 VAL 8 -5 -5 VAL VAL A . n A 1 9 PRO 9 -4 -4 PRO PRO A . n A 1 10 ARG 10 -3 -3 ARG ARG A . n A 1 11 GLY 11 -2 -2 GLY GLY A . n A 1 12 SER 12 -1 -1 SER SER A . n A 1 13 HIS 13 0 0 HIS HIS A . n A 1 14 MET 14 1 1 MET MET A . n A 1 15 ALA 15 2 2 ALA ALA A . n A 1 16 ASN 16 3 3 ASN ASN A . n A 1 17 LYS 17 4 4 LYS LYS A . n A 1 18 ALA 18 5 5 ALA ALA A . n A 1 19 VAL 19 6 6 VAL VAL A . n A 1 20 ASN 20 7 7 ASN ASN A . n A 1 21 ASP 21 8 8 ASP ASP A . n A 1 22 PHE 22 9 9 PHE PHE A . n A 1 23 ILE 23 10 10 ILE ILE A . n A 1 24 LEU 24 11 11 LEU LEU A . n A 1 25 ALA 25 12 12 ALA ALA A . n A 1 26 MET 26 13 13 MET MET A . n A 1 27 ASN 27 14 14 ASN ASN A . n A 1 28 TYR 28 15 15 TYR TYR A . n A 1 29 ASP 29 16 16 ASP ASP A . n A 1 30 LYS 30 17 17 LYS LYS A . n A 1 31 LYS 31 18 18 LYS LYS A . n A 1 32 LYS 32 19 19 LYS LYS A . n A 1 33 LEU 33 20 20 LEU LEU A . n A 1 34 LEU 34 21 21 LEU LEU A . n A 1 35 THR 35 22 22 THR THR A . n A 1 36 HIS 36 23 23 HIS HIS A . n A 1 37 GLN 37 24 24 GLN GLN A . n A 1 38 GLY 38 25 25 GLY GLY A . n A 1 39 GLU 39 26 26 GLU GLU A . n A 1 40 SER 40 27 27 SER SER A . n A 1 41 ILE 41 28 28 ILE ILE A . n A 1 42 GLU 42 29 29 GLU GLU A . n A 1 43 ASN 43 30 30 ASN ASN A . n A 1 44 ARG 44 31 31 ARG ARG A . n A 1 45 PHE 45 32 32 PHE PHE A . n A 1 46 ILE 46 33 33 ILE ILE A . n A 1 47 LYS 47 34 34 LYS LYS A . n A 1 48 GLU 48 35 35 GLU GLU A . n A 1 49 GLY 49 36 36 GLY GLY A . n A 1 50 ASN 50 37 37 ASN ASN A . n A 1 51 GLN 51 38 38 GLN GLN A . n A 1 52 LEU 52 39 39 LEU LEU A . n A 1 53 PRO 53 40 40 PRO PRO A . n A 1 54 ASP 54 41 41 ASP ASP A . n A 1 55 GLU 55 42 42 GLU GLU A . n A 1 56 PHE 56 43 43 PHE PHE A . n A 1 57 VAL 57 44 44 VAL VAL A . n A 1 58 VAL 58 45 45 VAL VAL A . n A 1 59 ILE 59 46 46 ILE ILE A . n A 1 60 GLU 60 47 47 GLU GLU A . n A 1 61 ARG 61 48 48 ARG ARG A . n A 1 62 LYS 62 49 49 LYS LYS A . n A 1 63 LYS 63 50 50 LYS LYS A . n A 1 64 ARG 64 51 51 ARG ARG A . n A 1 65 SER 65 52 52 SER SER A . n A 1 66 LEU 66 53 53 LEU LEU A . n A 1 67 SER 67 54 54 SER SER A . n A 1 68 THR 68 55 55 THR THR A . n A 1 69 ASN 69 56 56 ASN ASN A . n A 1 70 THR 70 57 57 THR THR A . n A 1 71 SER 71 58 58 SER SER A . n A 1 72 ASP 72 59 59 ASP ASP A . n A 1 73 ILE 73 60 60 ILE ILE A . n A 1 74 SER 74 61 61 SER SER A . n A 1 75 VAL 75 62 62 VAL VAL A . n A 1 76 THR 76 63 63 THR THR A . n A 1 77 ALA 77 64 64 ALA ALA A . n A 1 78 THR 78 65 65 THR THR A . n A 1 79 ASN 79 66 66 ASN ASN A . n A 1 80 ASP 80 67 67 ASP ASP A . n A 1 81 SER 81 68 68 SER SER A . n A 1 82 ARG 82 69 69 ARG ARG A . n A 1 83 LEU 83 70 70 LEU LEU A . n A 1 84 TYR 84 71 71 TYR TYR A . n A 1 85 PRO 85 72 72 PRO PRO A . n A 1 86 GLY 86 73 73 GLY GLY A . n A 1 87 ALA 87 74 74 ALA ALA A . n A 1 88 LEU 88 75 75 LEU LEU A . n A 1 89 LEU 89 76 76 LEU LEU A . n A 1 90 VAL 90 77 77 VAL VAL A . n A 1 91 VAL 91 78 78 VAL VAL A . n A 1 92 ASP 92 79 79 ASP ASP A . n A 1 93 GLU 93 80 80 GLU GLU A . n A 1 94 THR 94 81 81 THR THR A . n A 1 95 LEU 95 82 82 LEU LEU A . n A 1 96 LEU 96 83 83 LEU LEU A . n A 1 97 GLU 97 84 84 GLU GLU A . n A 1 98 ASN 98 85 85 ASN ASN A . n A 1 99 ASN 99 86 86 ASN ASN A . n A 1 100 PRO 100 87 87 PRO PRO A . n A 1 101 THR 101 88 88 THR THR A . n A 1 102 LEU 102 89 89 LEU LEU A . n A 1 103 LEU 103 90 90 LEU LEU A . n A 1 104 ALA 104 91 91 ALA ALA A . n A 1 105 VAL 105 92 92 VAL VAL A . n A 1 106 ASP 106 93 93 ASP ASP A . n A 1 107 ARG 107 94 94 ARG ARG A . n A 1 108 ALA 108 95 95 ALA ALA A . n A 1 109 PRO 109 96 96 PRO PRO A . n A 1 110 MET 110 97 97 MET MET A . n A 1 111 THR 111 98 98 THR THR A . n A 1 112 TYR 112 99 99 TYR TYR A . n A 1 113 SER 113 100 100 SER SER A . n A 1 114 ILE 114 101 101 ILE ILE A . n A 1 115 ASP 115 102 102 ASP ASP A . n A 1 116 LEU 116 103 103 LEU LEU A . n A 1 117 PRO 117 104 104 PRO PRO A . n A 1 118 GLY 118 105 105 GLY GLY A . n A 1 119 LEU 119 106 106 LEU LEU A . n A 1 120 ALA 120 107 107 ALA ALA A . n A 1 121 SER 121 108 108 SER SER A . n A 1 122 SER 122 109 109 SER SER A . n A 1 123 ASP 123 110 110 ASP ASP A . n A 1 124 SER 124 111 111 SER SER A . n A 1 125 PHE 125 112 112 PHE PHE A . n A 1 126 LEU 126 113 113 LEU LEU A . n A 1 127 GLN 127 114 114 GLN GLN A . n A 1 128 VAL 128 115 115 VAL VAL A . n A 1 129 GLU 129 116 116 GLU GLU A . n A 1 130 ASP 130 117 117 ASP ASP A . n A 1 131 PRO 131 118 118 PRO PRO A . n A 1 132 SER 132 119 119 SER SER A . n A 1 133 ASN 133 120 120 ASN ASN A . n A 1 134 SER 134 121 121 SER SER A . n A 1 135 SER 135 122 122 SER SER A . n A 1 136 VAL 136 123 123 VAL VAL A . n A 1 137 ARG 137 124 124 ARG ARG A . n A 1 138 GLY 138 125 125 GLY GLY A . n A 1 139 ALA 139 126 126 ALA ALA A . n A 1 140 VAL 140 127 127 VAL VAL A . n A 1 141 ASN 141 128 128 ASN ASN A . n A 1 142 ASP 142 129 129 ASP ASP A . n A 1 143 LEU 143 130 130 LEU LEU A . n A 1 144 LEU 144 131 131 LEU LEU A . n A 1 145 ALA 145 132 132 ALA ALA A . n A 1 146 LYS 146 133 133 LYS LYS A . n A 1 147 TRP 147 134 134 TRP TRP A . n A 1 148 HIS 148 135 135 HIS HIS A . n A 1 149 GLN 149 136 136 GLN GLN A . n A 1 150 ASP 150 137 137 ASP ASP A . n A 1 151 TYR 151 138 138 TYR TYR A . n A 1 152 GLY 152 139 139 GLY GLY A . n A 1 153 GLN 153 140 140 GLN GLN A . n A 1 154 VAL 154 141 141 VAL VAL A . n A 1 155 ASN 155 142 142 ASN ASN A . n A 1 156 ASN 156 143 143 ASN ASN A . n A 1 157 VAL 157 144 144 VAL VAL A . n A 1 158 PRO 158 145 145 PRO PRO A . n A 1 159 ALA 159 146 146 ALA ALA A . n A 1 160 ARG 160 147 147 ARG ARG A . n A 1 161 MET 161 148 148 MET MET A . n A 1 162 GLN 162 149 149 GLN GLN A . n A 1 163 TYR 163 150 150 TYR TYR A . n A 1 164 GLU 164 151 151 GLU GLU A . n A 1 165 LYS 165 152 152 LYS LYS A . n A 1 166 ILE 166 153 153 ILE ILE A . n A 1 167 THR 167 154 154 THR THR A . n A 1 168 ALA 168 155 155 ALA ALA A . n A 1 169 HIS 169 156 156 HIS HIS A . n A 1 170 SER 170 157 157 SER SER A . n A 1 171 MET 171 158 158 MET MET A . n A 1 172 GLU 172 159 159 GLU GLU A . n A 1 173 GLN 173 160 160 GLN GLN A . n A 1 174 LEU 174 161 161 LEU LEU A . n A 1 175 LYS 175 162 162 LYS LYS A . n A 1 176 VAL 176 163 163 VAL VAL A . n A 1 177 LYS 177 164 164 LYS LYS A . n A 1 178 PHE 178 165 165 PHE PHE A . n A 1 179 GLY 179 166 166 GLY GLY A . n A 1 180 SER 180 167 167 SER SER A . n A 1 181 ASP 181 168 168 ASP ASP A . n A 1 182 PHE 182 169 169 PHE PHE A . n A 1 183 GLU 183 170 170 GLU GLU A . n A 1 184 LYS 184 171 171 LYS LYS A . n A 1 185 THR 185 172 172 THR THR A . n A 1 186 GLY 186 173 173 GLY GLY A . n A 1 187 ASN 187 174 174 ASN ASN A . n A 1 188 SER 188 175 175 SER SER A . n A 1 189 LEU 189 176 176 LEU LEU A . n A 1 190 ASP 190 177 177 ASP ASP A . n A 1 191 ILE 191 178 178 ILE ILE A . n A 1 192 ASP 192 179 179 ASP ASP A . n A 1 193 PHE 193 180 180 PHE PHE A . n A 1 194 ASN 194 181 181 ASN ASN A . n A 1 195 SER 195 182 182 SER SER A . n A 1 196 VAL 196 183 183 VAL VAL A . n A 1 197 HIS 197 184 184 HIS HIS A . n A 1 198 SER 198 185 185 SER SER A . n A 1 199 GLY 199 186 186 GLY GLY A . n A 1 200 GLU 200 187 187 GLU GLU A . n A 1 201 LYS 201 188 188 LYS LYS A . n A 1 202 GLN 202 189 189 GLN GLN A . n A 1 203 ILE 203 190 190 ILE ILE A . n A 1 204 GLN 204 191 191 GLN GLN A . n A 1 205 ILE 205 192 192 ILE ILE A . n A 1 206 VAL 206 193 193 VAL VAL A . n A 1 207 ASN 207 194 194 ASN ASN A . n A 1 208 PHE 208 195 195 PHE PHE A . n A 1 209 LYS 209 196 196 LYS LYS A . n A 1 210 GLN 210 197 197 GLN GLN A . n A 1 211 ILE 211 198 198 ILE ILE A . n A 1 212 TYR 212 199 199 TYR TYR A . n A 1 213 TYR 213 200 200 TYR TYR A . n A 1 214 THR 214 201 201 THR THR A . n A 1 215 VAL 215 202 202 VAL VAL A . n A 1 216 SER 216 203 203 SER SER A . n A 1 217 VAL 217 204 204 VAL VAL A . n A 1 218 ASP 218 205 205 ASP ASP A . n A 1 219 ALA 219 206 206 ALA ALA A . n A 1 220 VAL 220 207 207 VAL VAL A . n A 1 221 LYS 221 208 208 LYS LYS A . n A 1 222 ASN 222 209 209 ASN ASN A . n A 1 223 PRO 223 210 210 PRO PRO A . n A 1 224 GLY 224 211 211 GLY GLY A . n A 1 225 ASP 225 212 212 ASP ASP A . n A 1 226 VAL 226 213 213 VAL VAL A . n A 1 227 PHE 227 214 214 PHE PHE A . n A 1 228 GLN 228 215 215 GLN GLN A . n A 1 229 ASP 229 216 216 ASP ASP A . n A 1 230 THR 230 217 217 THR THR A . n A 1 231 VAL 231 218 218 VAL VAL A . n A 1 232 THR 232 219 219 THR THR A . n A 1 233 VAL 233 220 220 VAL VAL A . n A 1 234 GLU 234 221 221 GLU GLU A . n A 1 235 ASP 235 222 222 ASP ASP A . n A 1 236 LEU 236 223 223 LEU LEU A . n A 1 237 LYS 237 224 224 LYS LYS A . n A 1 238 GLN 238 225 225 GLN GLN A . n A 1 239 ARG 239 226 226 ARG ARG A . n A 1 240 GLY 240 227 227 GLY GLY A . n A 1 241 ILE 241 228 228 ILE ILE A . n A 1 242 SER 242 229 229 SER SER A . n A 1 243 ALA 243 230 230 ALA ALA A . n A 1 244 GLU 244 231 231 GLU GLU A . n A 1 245 ARG 245 232 232 ARG ARG A . n A 1 246 PRO 246 233 233 PRO PRO A . n A 1 247 LEU 247 234 234 LEU LEU A . n A 1 248 VAL 248 235 235 VAL VAL A . n A 1 249 TYR 249 236 236 TYR TYR A . n A 1 250 ILE 250 237 237 ILE ILE A . n A 1 251 SER 251 238 238 SER SER A . n A 1 252 SER 252 239 239 SER SER A . n A 1 253 VAL 253 240 240 VAL VAL A . n A 1 254 ALA 254 241 241 ALA ALA A . n A 1 255 TYR 255 242 242 TYR TYR A . n A 1 256 GLY 256 243 243 GLY GLY A . n A 1 257 ARG 257 244 244 ARG ARG A . n A 1 258 GLN 258 245 245 GLN GLN A . n A 1 259 VAL 259 246 246 VAL VAL A . n A 1 260 TYR 260 247 247 TYR TYR A . n A 1 261 LEU 261 248 248 LEU LEU A . n A 1 262 LYS 262 249 249 LYS LYS A . n A 1 263 LEU 263 250 250 LEU LEU A . n A 1 264 GLU 264 251 251 GLU GLU A . n A 1 265 THR 265 252 252 THR THR A . n A 1 266 THR 266 253 253 THR THR A . n A 1 267 SER 267 254 254 SER SER A . n A 1 268 LYS 268 255 255 LYS LYS A . n A 1 269 SER 269 256 256 SER SER A . n A 1 270 ASP 270 257 257 ASP ASP A . n A 1 271 GLU 271 258 258 GLU GLU A . n A 1 272 VAL 272 259 259 VAL VAL A . n A 1 273 GLU 273 260 260 GLU GLU A . n A 1 274 ALA 274 261 261 ALA ALA A . n A 1 275 ALA 275 262 262 ALA ALA A . n A 1 276 PHE 276 263 263 PHE PHE A . n A 1 277 GLU 277 264 264 GLU GLU A . n A 1 278 ALA 278 265 265 ALA ALA A . n A 1 279 LEU 279 266 266 LEU LEU A . n A 1 280 ILE 280 267 267 ILE ILE A . n A 1 281 LYS 281 268 268 LYS LYS A . n A 1 282 GLY 282 269 269 GLY GLY A . n A 1 283 VAL 283 270 270 VAL VAL A . n A 1 284 LYS 284 271 271 LYS LYS A . n A 1 285 VAL 285 272 272 VAL VAL A . n A 1 286 ALA 286 273 273 ALA ALA A . n A 1 287 PRO 287 274 274 PRO PRO A . n A 1 288 GLN 288 275 275 GLN GLN A . n A 1 289 THR 289 276 276 THR THR A . n A 1 290 GLU 290 277 277 GLU GLU A . n A 1 291 TRP 291 278 278 TRP TRP A . n A 1 292 LYS 292 279 279 LYS LYS A . n A 1 293 GLN 293 280 280 GLN GLN A . n A 1 294 ILE 294 281 281 ILE ILE A . n A 1 295 LEU 295 282 282 LEU LEU A . n A 1 296 ASP 296 283 283 ASP ASP A . n A 1 297 ASN 297 284 284 ASN ASN A . n A 1 298 THR 298 285 285 THR THR A . n A 1 299 GLU 299 286 286 GLU GLU A . n A 1 300 VAL 300 287 287 VAL VAL A . n A 1 301 LYS 301 288 288 LYS LYS A . n A 1 302 ALA 302 289 289 ALA ALA A . n A 1 303 VAL 303 290 290 VAL VAL A . n A 1 304 ILE 304 291 291 ILE ILE A . n A 1 305 LEU 305 292 292 LEU LEU A . n A 1 306 GLY 306 293 293 GLY GLY A . n A 1 307 GLY 307 294 294 GLY GLY A . n A 1 308 ASP 308 295 295 ASP ASP A . n A 1 309 PRO 309 296 296 PRO PRO A . n A 1 310 SER 310 297 297 SER SER A . n A 1 311 SER 311 298 298 SER SER A . n A 1 312 GLY 312 299 299 GLY GLY A . n A 1 313 ALA 313 300 300 ALA ALA A . n A 1 314 ARG 314 301 301 ARG ARG A . n A 1 315 VAL 315 302 302 VAL VAL A . n A 1 316 VAL 316 303 303 VAL VAL A . n A 1 317 THR 317 304 304 THR THR A . n A 1 318 GLY 318 305 305 GLY GLY A . n A 1 319 LYS 319 306 306 LYS LYS A . n A 1 320 VAL 320 307 307 VAL VAL A . n A 1 321 ASP 321 308 308 ASP ASP A . n A 1 322 MET 322 309 309 MET MET A . n A 1 323 VAL 323 310 310 VAL VAL A . n A 1 324 GLU 324 311 311 GLU GLU A . n A 1 325 ASP 325 312 312 ASP ASP A . n A 1 326 LEU 326 313 313 LEU LEU A . n A 1 327 ILE 327 314 314 ILE ILE A . n A 1 328 GLN 328 315 315 GLN GLN A . n A 1 329 GLU 329 316 316 GLU GLU A . n A 1 330 GLY 330 317 317 GLY GLY A . n A 1 331 SER 331 318 318 SER SER A . n A 1 332 ARG 332 319 319 ARG ARG A . n A 1 333 PHE 333 320 320 PHE PHE A . n A 1 334 THR 334 321 321 THR THR A . n A 1 335 ALA 335 322 322 ALA ALA A . n A 1 336 ASP 336 323 323 ASP ASP A . n A 1 337 HIS 337 324 324 HIS HIS A . n A 1 338 PRO 338 325 325 PRO PRO A . n A 1 339 GLY 339 326 326 GLY GLY A . n A 1 340 LEU 340 327 327 LEU LEU A . n A 1 341 PRO 341 328 328 PRO PRO A . n A 1 342 ILE 342 329 329 ILE ILE A . n A 1 343 SER 343 330 330 SER SER A . n A 1 344 TYR 344 331 331 TYR TYR A . n A 1 345 THR 345 332 332 THR THR A . n A 1 346 THR 346 333 333 THR THR A . n A 1 347 SER 347 334 334 SER SER A . n A 1 348 PHE 348 335 335 PHE PHE A . n A 1 349 LEU 349 336 336 LEU LEU A . n A 1 350 ARG 350 337 337 ARG ARG A . n A 1 351 ASP 351 338 338 ASP ASP A . n A 1 352 ASN 352 339 339 ASN ASN A . n A 1 353 VAL 353 340 340 VAL VAL A . n A 1 354 VAL 354 341 341 VAL VAL A . n A 1 355 ALA 355 342 342 ALA ALA A . n A 1 356 THR 356 343 343 THR THR A . n A 1 357 PHE 357 344 344 PHE PHE A . n A 1 358 GLN 358 345 345 GLN GLN A . n A 1 359 ASN 359 346 346 ASN ASN A . n A 1 360 SER 360 347 347 SER SER A . n A 1 361 THR 361 348 348 THR THR A . n A 1 362 ASP 362 349 349 ASP ASP A . n A 1 363 TYR 363 350 350 TYR TYR A . n A 1 364 VAL 364 351 351 VAL VAL A . n A 1 365 GLU 365 352 352 GLU GLU A . n A 1 366 THR 366 353 353 THR THR A . n A 1 367 LYS 367 354 354 LYS LYS A . n A 1 368 VAL 368 355 355 VAL VAL A . n A 1 369 THR 369 356 356 THR THR A . n A 1 370 ALA 370 357 357 ALA ALA A . n A 1 371 TYR 371 358 358 TYR TYR A . n A 1 372 ARG 372 359 359 ARG ARG A . n A 1 373 ASN 373 360 360 ASN ASN A . n A 1 374 GLY 374 361 361 GLY GLY A . n A 1 375 ASP 375 362 362 ASP ASP A . n A 1 376 LEU 376 363 363 LEU LEU A . n A 1 377 LEU 377 364 364 LEU LEU A . n A 1 378 LEU 378 365 365 LEU LEU A . n A 1 379 ASP 379 366 366 ASP ASP A . n A 1 380 HIS 380 367 367 HIS HIS A . n A 1 381 SER 381 368 368 SER SER A . n A 1 382 GLY 382 369 369 GLY GLY A . n A 1 383 ALA 383 370 370 ALA ALA A . n A 1 384 TYR 384 371 371 TYR TYR A . n A 1 385 VAL 385 372 372 VAL VAL A . n A 1 386 ALA 386 373 373 ALA ALA A . n A 1 387 GLN 387 374 374 GLN GLN A . n A 1 388 TYR 388 375 375 TYR TYR A . n A 1 389 TYR 389 376 376 TYR TYR A . n A 1 390 ILE 390 377 377 ILE ILE A . n A 1 391 THR 391 378 378 THR THR A . n A 1 392 TRP 392 379 379 TRP TRP A . n A 1 393 ASN 393 380 380 ASN ASN A . n A 1 394 GLU 394 381 381 GLU GLU A . n A 1 395 LEU 395 382 382 LEU LEU A . n A 1 396 SER 396 383 383 SER SER A . n A 1 397 TYR 397 384 384 TYR TYR A . n A 1 398 ASP 398 385 385 ASP ASP A . n A 1 399 HIS 399 386 386 HIS HIS A . n A 1 400 GLN 400 387 387 GLN GLN A . n A 1 401 GLY 401 388 388 GLY GLY A . n A 1 402 LYS 402 389 389 LYS LYS A . n A 1 403 GLU 403 390 390 GLU GLU A . n A 1 404 VAL 404 391 391 VAL VAL A . n A 1 405 LEU 405 392 392 LEU LEU A . n A 1 406 THR 406 393 393 THR THR A . n A 1 407 PRO 407 394 394 PRO PRO A . n A 1 408 LYS 408 395 395 LYS LYS A . n A 1 409 ALA 409 396 396 ALA ALA A . n A 1 410 TRP 410 397 397 TRP TRP A . n A 1 411 ASP 411 398 398 ASP ASP A . n A 1 412 ARG 412 399 399 ARG ARG A . n A 1 413 ASN 413 400 400 ASN ASN A . n A 1 414 GLY 414 401 401 GLY GLY A . n A 1 415 GLN 415 402 402 GLN GLN A . n A 1 416 ASP 416 403 403 ASP ASP A . n A 1 417 LEU 417 404 404 LEU LEU A . n A 1 418 THR 418 405 405 THR THR A . n A 1 419 ALA 419 406 406 ALA ALA A . n A 1 420 HIS 420 407 407 HIS HIS A . n A 1 421 PHE 421 408 408 PHE PHE A . n A 1 422 THR 422 409 409 THR THR A . n A 1 423 THR 423 410 410 THR THR A . n A 1 424 SER 424 411 411 SER SER A . n A 1 425 ILE 425 412 412 ILE ILE A . n A 1 426 PRO 426 413 413 PRO PRO A . n A 1 427 LEU 427 414 414 LEU LEU A . n A 1 428 LYS 428 415 415 LYS LYS A . n A 1 429 GLY 429 416 416 GLY GLY A . n A 1 430 ASN 430 417 417 ASN ASN A . n A 1 431 VAL 431 418 418 VAL VAL A . n A 1 432 ARG 432 419 419 ARG ARG A . n A 1 433 ASN 433 420 420 ASN ASN A . n A 1 434 LEU 434 421 421 LEU LEU A . n A 1 435 SER 435 422 422 SER SER A . n A 1 436 VAL 436 423 423 VAL VAL A . n A 1 437 LYS 437 424 424 LYS LYS A . n A 1 438 ILE 438 425 425 ILE ILE A . n A 1 439 ARG 439 426 426 ARG ARG A . n A 1 440 GLU 440 427 427 GLU GLU A . n A 1 441 CYS 441 428 428 CYS CYS A . n A 1 442 THR 442 429 429 THR THR A . n A 1 443 GLY 443 430 430 GLY GLY A . n A 1 444 LEU 444 431 431 LEU LEU A . n A 1 445 ALA 445 432 432 ALA ALA A . n A 1 446 TRP 446 433 433 TRP TRP A . n A 1 447 GLU 447 434 434 GLU GLU A . n A 1 448 TRP 448 435 435 TRP TRP A . n A 1 449 TRP 449 436 436 TRP TRP A . n A 1 450 ARG 450 437 437 ARG ARG A . n A 1 451 THR 451 438 438 THR THR A . n A 1 452 VAL 452 439 439 VAL VAL A . n A 1 453 TYR 453 440 440 TYR TYR A . n A 1 454 GLU 454 441 441 GLU GLU A . n A 1 455 LYS 455 442 442 LYS LYS A . n A 1 456 THR 456 443 443 THR THR A . n A 1 457 ASP 457 444 444 ASP ASP A . n A 1 458 LEU 458 445 445 LEU LEU A . n A 1 459 PRO 459 446 446 PRO PRO A . n A 1 460 LEU 460 447 447 LEU LEU A . n A 1 461 VAL 461 448 448 VAL VAL A . n A 1 462 ARG 462 449 449 ARG ARG A . n A 1 463 LYS 463 450 450 LYS LYS A . n A 1 464 ARG 464 451 451 ARG ARG A . n A 1 465 THR 465 452 452 THR THR A . n A 1 466 ILE 466 453 453 ILE ILE A . n A 1 467 SER 467 454 454 SER SER A . n A 1 468 ILE 468 455 455 ILE ILE A . n A 1 469 TRP 469 456 456 TRP TRP A . n A 1 470 GLY 470 457 457 GLY GLY A . n A 1 471 THR 471 458 458 THR THR A . n A 1 472 THR 472 459 459 THR THR A . n A 1 473 LEU 473 460 460 LEU LEU A . n A 1 474 TYR 474 461 461 TYR TYR A . n A 1 475 PRO 475 462 462 PRO PRO A . n A 1 476 GLN 476 463 463 GLN GLN A . n A 1 477 VAL 477 464 464 VAL VAL A . n A 1 478 GLU 478 465 465 GLU GLU A . n A 1 479 ASP 479 466 466 ASP ASP A . n A 1 480 LYS 480 467 467 LYS LYS A . n A 1 481 VAL 481 468 468 VAL VAL A . n A 1 482 GLU 482 469 469 GLU GLU A . n A 1 483 ASN 483 470 470 ASN ASN A . n A 1 484 ASP 484 471 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MAN 1 501 1 MAN MAN A . C 2 MAN 1 502 2 MAN MAN A . D 3 HOH 1 601 1 HOH HOH A . D 3 HOH 2 602 2 HOH HOH A . D 3 HOH 3 603 3 HOH HOH A . D 3 HOH 4 604 4 HOH HOH A . D 3 HOH 5 605 5 HOH HOH A . D 3 HOH 6 606 6 HOH HOH A . D 3 HOH 7 607 7 HOH HOH A . D 3 HOH 8 608 9 HOH HOH A . D 3 HOH 9 609 10 HOH HOH A . D 3 HOH 10 610 11 HOH HOH A . D 3 HOH 11 611 12 HOH HOH A . D 3 HOH 12 612 13 HOH HOH A . D 3 HOH 13 613 14 HOH HOH A . D 3 HOH 14 614 15 HOH HOH A . D 3 HOH 15 615 16 HOH HOH A . D 3 HOH 16 616 17 HOH HOH A . D 3 HOH 17 617 18 HOH HOH A . D 3 HOH 18 618 19 HOH HOH A . D 3 HOH 19 619 20 HOH HOH A . D 3 HOH 20 620 21 HOH HOH A . D 3 HOH 21 621 22 HOH HOH A . D 3 HOH 22 622 23 HOH HOH A . D 3 HOH 23 623 24 HOH HOH A . D 3 HOH 24 624 25 HOH HOH A . D 3 HOH 25 625 26 HOH HOH A . D 3 HOH 26 626 27 HOH HOH A . D 3 HOH 27 627 28 HOH HOH A . D 3 HOH 28 628 29 HOH HOH A . D 3 HOH 29 629 30 HOH HOH A . D 3 HOH 30 630 31 HOH HOH A . D 3 HOH 31 631 32 HOH HOH A . D 3 HOH 32 632 33 HOH HOH A . D 3 HOH 33 633 34 HOH HOH A . D 3 HOH 34 634 35 HOH HOH A . D 3 HOH 35 635 36 HOH HOH A . D 3 HOH 36 636 37 HOH HOH A . D 3 HOH 37 637 38 HOH HOH A . D 3 HOH 38 638 39 HOH HOH A . D 3 HOH 39 639 40 HOH HOH A . D 3 HOH 40 640 41 HOH HOH A . D 3 HOH 41 641 42 HOH HOH A . D 3 HOH 42 642 43 HOH HOH A . D 3 HOH 43 643 44 HOH HOH A . D 3 HOH 44 644 45 HOH HOH A . D 3 HOH 45 645 46 HOH HOH A . D 3 HOH 46 646 47 HOH HOH A . D 3 HOH 47 647 48 HOH HOH A . D 3 HOH 48 648 49 HOH HOH A . D 3 HOH 49 649 50 HOH HOH A . D 3 HOH 50 650 51 HOH HOH A . D 3 HOH 51 651 52 HOH HOH A . D 3 HOH 52 652 53 HOH HOH A . D 3 HOH 53 653 54 HOH HOH A . D 3 HOH 54 654 55 HOH HOH A . D 3 HOH 55 655 56 HOH HOH A . D 3 HOH 56 656 57 HOH HOH A . D 3 HOH 57 657 58 HOH HOH A . D 3 HOH 58 658 59 HOH HOH A . D 3 HOH 59 659 60 HOH HOH A . D 3 HOH 60 660 61 HOH HOH A . D 3 HOH 61 661 62 HOH HOH A . D 3 HOH 62 662 63 HOH HOH A . D 3 HOH 63 663 64 HOH HOH A . D 3 HOH 64 664 65 HOH HOH A . D 3 HOH 65 665 66 HOH HOH A . D 3 HOH 66 666 67 HOH HOH A . D 3 HOH 67 667 68 HOH HOH A . D 3 HOH 68 668 69 HOH HOH A . D 3 HOH 69 669 70 HOH HOH A . D 3 HOH 70 670 71 HOH HOH A . D 3 HOH 71 671 72 HOH HOH A . D 3 HOH 72 672 73 HOH HOH A . D 3 HOH 73 673 74 HOH HOH A . D 3 HOH 74 674 75 HOH HOH A . D 3 HOH 75 675 76 HOH HOH A . D 3 HOH 76 676 77 HOH HOH A . D 3 HOH 77 677 78 HOH HOH A . D 3 HOH 78 678 79 HOH HOH A . D 3 HOH 79 679 81 HOH HOH A . D 3 HOH 80 680 82 HOH HOH A . D 3 HOH 81 681 83 HOH HOH A . D 3 HOH 82 682 84 HOH HOH A . D 3 HOH 83 683 85 HOH HOH A . D 3 HOH 84 684 86 HOH HOH A . D 3 HOH 85 685 87 HOH HOH A . D 3 HOH 86 686 88 HOH HOH A . D 3 HOH 87 687 89 HOH HOH A . D 3 HOH 88 688 90 HOH HOH A . D 3 HOH 89 689 91 HOH HOH A . D 3 HOH 90 690 92 HOH HOH A . D 3 HOH 91 691 94 HOH HOH A . D 3 HOH 92 692 95 HOH HOH A . D 3 HOH 93 693 96 HOH HOH A . D 3 HOH 94 694 98 HOH HOH A . D 3 HOH 95 695 99 HOH HOH A . D 3 HOH 96 696 100 HOH HOH A . D 3 HOH 97 697 101 HOH HOH A . D 3 HOH 98 698 102 HOH HOH A . D 3 HOH 99 699 107 HOH HOH A . D 3 HOH 100 700 108 HOH HOH A . D 3 HOH 101 701 109 HOH HOH A . D 3 HOH 102 702 112 HOH HOH A . D 3 HOH 103 703 113 HOH HOH A . D 3 HOH 104 704 114 HOH HOH A . D 3 HOH 105 705 115 HOH HOH A . D 3 HOH 106 706 117 HOH HOH A . D 3 HOH 107 707 118 HOH HOH A . D 3 HOH 108 708 119 HOH HOH A . D 3 HOH 109 709 120 HOH HOH A . D 3 HOH 110 710 121 HOH HOH A . D 3 HOH 111 711 122 HOH HOH A . D 3 HOH 112 712 124 HOH HOH A . D 3 HOH 113 713 127 HOH HOH A . D 3 HOH 114 714 130 HOH HOH A . D 3 HOH 115 715 131 HOH HOH A . D 3 HOH 116 716 133 HOH HOH A . D 3 HOH 117 717 134 HOH HOH A . D 3 HOH 118 718 135 HOH HOH A . D 3 HOH 119 719 138 HOH HOH A . D 3 HOH 120 720 139 HOH HOH A . D 3 HOH 121 721 140 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-07-22 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_ref_seq_dif 6 2 'Structure model' struct_site 7 2 'Structure model' struct_site_gen 8 3 'Structure model' chem_comp 9 3 'Structure model' chem_comp_atom 10 3 'Structure model' chem_comp_bond 11 3 'Structure model' database_2 12 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_entity_nonpoly.name' 5 2 'Structure model' '_struct_ref_seq_dif.details' 6 3 'Structure model' '_chem_comp.pdbx_synonyms' 7 3 'Structure model' '_database_2.pdbx_DOI' 8 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 399 ? ? OE1 A GLN 402 ? ? 2.08 2 1 OG1 A THR 98 ? ? OE1 A GLN 114 ? ? 2.18 3 1 NE1 A TRP 433 ? ? O A HOH 703 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 28 ? ? -49.84 87.88 2 1 GLU A 29 ? ? -119.15 55.29 3 1 ASN A 30 ? ? -73.74 -150.50 4 1 ALA A 107 ? ? -72.20 -135.53 5 1 SER A 108 ? ? -100.85 -74.80 6 1 TYR A 138 ? ? -177.41 -75.05 7 1 PRO A 145 ? ? -102.43 -74.31 8 1 HIS A 156 ? ? -129.89 -52.49 9 1 PRO A 233 ? ? -75.39 -167.51 10 1 SER A 256 ? ? -57.54 7.49 11 1 ASP A 257 ? ? 12.48 46.96 12 1 GLU A 258 ? ? -159.73 54.49 13 1 ALA A 273 ? ? 64.74 61.74 14 1 GLN A 275 ? ? -156.36 37.27 15 1 THR A 276 ? ? -129.75 -135.71 16 1 SER A 297 ? ? -58.34 92.10 17 1 VAL A 303 ? ? 36.82 76.74 18 1 THR A 304 ? ? -59.43 6.87 19 1 MET A 309 ? ? -90.89 58.33 20 1 ALA A 322 ? ? 71.86 31.06 21 1 GLN A 387 ? ? 102.27 -9.10 22 1 TRP A 456 ? ? -160.23 -160.43 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ASP _pdbx_unobs_or_zero_occ_residues.auth_seq_id 471 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ASP _pdbx_unobs_or_zero_occ_residues.label_seq_id 484 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MAN C1 C N S 230 MAN C2 C N S 231 MAN C3 C N S 232 MAN C4 C N S 233 MAN C5 C N R 234 MAN C6 C N N 235 MAN O1 O N N 236 MAN O2 O N N 237 MAN O3 O N N 238 MAN O4 O N N 239 MAN O5 O N N 240 MAN O6 O N N 241 MAN H1 H N N 242 MAN H2 H N N 243 MAN H3 H N N 244 MAN H4 H N N 245 MAN H5 H N N 246 MAN H61 H N N 247 MAN H62 H N N 248 MAN HO1 H N N 249 MAN HO2 H N N 250 MAN HO3 H N N 251 MAN HO4 H N N 252 MAN HO6 H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MAN C1 C2 sing N N 218 MAN C1 O1 sing N N 219 MAN C1 O5 sing N N 220 MAN C1 H1 sing N N 221 MAN C2 C3 sing N N 222 MAN C2 O2 sing N N 223 MAN C2 H2 sing N N 224 MAN C3 C4 sing N N 225 MAN C3 O3 sing N N 226 MAN C3 H3 sing N N 227 MAN C4 C5 sing N N 228 MAN C4 O4 sing N N 229 MAN C4 H4 sing N N 230 MAN C5 C6 sing N N 231 MAN C5 O5 sing N N 232 MAN C5 H5 sing N N 233 MAN C6 O6 sing N N 234 MAN C6 H61 sing N N 235 MAN C6 H62 sing N N 236 MAN O1 HO1 sing N N 237 MAN O2 HO2 sing N N 238 MAN O3 HO3 sing N N 239 MAN O4 HO4 sing N N 240 MAN O6 HO6 sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TRP N CA sing N N 330 TRP N H sing N N 331 TRP N H2 sing N N 332 TRP CA C sing N N 333 TRP CA CB sing N N 334 TRP CA HA sing N N 335 TRP C O doub N N 336 TRP C OXT sing N N 337 TRP CB CG sing N N 338 TRP CB HB2 sing N N 339 TRP CB HB3 sing N N 340 TRP CG CD1 doub Y N 341 TRP CG CD2 sing Y N 342 TRP CD1 NE1 sing Y N 343 TRP CD1 HD1 sing N N 344 TRP CD2 CE2 doub Y N 345 TRP CD2 CE3 sing Y N 346 TRP NE1 CE2 sing Y N 347 TRP NE1 HE1 sing N N 348 TRP CE2 CZ2 sing Y N 349 TRP CE3 CZ3 doub Y N 350 TRP CE3 HE3 sing N N 351 TRP CZ2 CH2 doub Y N 352 TRP CZ2 HZ2 sing N N 353 TRP CZ3 CH2 sing Y N 354 TRP CZ3 HZ3 sing N N 355 TRP CH2 HH2 sing N N 356 TRP OXT HXT sing N N 357 TYR N CA sing N N 358 TYR N H sing N N 359 TYR N H2 sing N N 360 TYR CA C sing N N 361 TYR CA CB sing N N 362 TYR CA HA sing N N 363 TYR C O doub N N 364 TYR C OXT sing N N 365 TYR CB CG sing N N 366 TYR CB HB2 sing N N 367 TYR CB HB3 sing N N 368 TYR CG CD1 doub Y N 369 TYR CG CD2 sing Y N 370 TYR CD1 CE1 sing Y N 371 TYR CD1 HD1 sing N N 372 TYR CD2 CE2 doub Y N 373 TYR CD2 HD2 sing N N 374 TYR CE1 CZ doub Y N 375 TYR CE1 HE1 sing N N 376 TYR CE2 CZ sing Y N 377 TYR CE2 HE2 sing N N 378 TYR CZ OH sing N N 379 TYR OH HH sing N N 380 TYR OXT HXT sing N N 381 VAL N CA sing N N 382 VAL N H sing N N 383 VAL N H2 sing N N 384 VAL CA C sing N N 385 VAL CA CB sing N N 386 VAL CA HA sing N N 387 VAL C O doub N N 388 VAL C OXT sing N N 389 VAL CB CG1 sing N N 390 VAL CB CG2 sing N N 391 VAL CB HB sing N N 392 VAL CG1 HG11 sing N N 393 VAL CG1 HG12 sing N N 394 VAL CG1 HG13 sing N N 395 VAL CG2 HG21 sing N N 396 VAL CG2 HG22 sing N N 397 VAL CG2 HG23 sing N N 398 VAL OXT HXT sing N N 399 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-D-mannopyranose MAN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4QQA _pdbx_initial_refinement_model.details 'PDB ENTRY 4QQA' #