data_4QRK # _entry.id 4QRK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QRK pdb_00004qrk 10.2210/pdb4qrk/pdb RCSB RCSB086423 ? ? WWPDB D_1000086423 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-420905 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4QRK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-07-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category CASP _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (CLOSPO_03726) from Clostridium sporogenes ATCC 15579 at 1.95 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4QRK _cell.length_a 72.348 _cell.length_b 72.348 _cell.length_c 109.470 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QRK _symmetry.Int_Tables_number 169 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 24107.018 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 water nat water 18.015 158 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GTVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKL(MSE)KGKFIYSENEWKPEIKYEVKDKDGELEISQ PGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVG(MSE)GVGKVDLDISGNYKNNVKVNIE GGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK ; _entity_poly.pdbx_seq_one_letter_code_can ;GTVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLK SGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGNYKNNVKVNIEGGVGEATV YLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-420905 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 THR n 1 3 VAL n 1 4 SER n 1 5 ASP n 1 6 THR n 1 7 ASN n 1 8 GLU n 1 9 LYS n 1 10 PRO n 1 11 LYS n 1 12 GLU n 1 13 GLU n 1 14 ILE n 1 15 LYS n 1 16 ILE n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 ASN n 1 21 GLY n 1 22 ALA n 1 23 GLU n 1 24 LYS n 1 25 THR n 1 26 LYS n 1 27 LEU n 1 28 ASN n 1 29 LEU n 1 30 ASN n 1 31 PHE n 1 32 GLY n 1 33 VAL n 1 34 GLY n 1 35 LYS n 1 36 LEU n 1 37 ASN n 1 38 ILE n 1 39 SER n 1 40 GLY n 1 41 ASN n 1 42 GLU n 1 43 GLU n 1 44 LYS n 1 45 LEU n 1 46 MSE n 1 47 LYS n 1 48 GLY n 1 49 LYS n 1 50 PHE n 1 51 ILE n 1 52 TYR n 1 53 SER n 1 54 GLU n 1 55 ASN n 1 56 GLU n 1 57 TRP n 1 58 LYS n 1 59 PRO n 1 60 GLU n 1 61 ILE n 1 62 LYS n 1 63 TYR n 1 64 GLU n 1 65 VAL n 1 66 LYS n 1 67 ASP n 1 68 LYS n 1 69 ASP n 1 70 GLY n 1 71 GLU n 1 72 LEU n 1 73 GLU n 1 74 ILE n 1 75 SER n 1 76 GLN n 1 77 PRO n 1 78 GLY n 1 79 LEU n 1 80 LYS n 1 81 SER n 1 82 GLY n 1 83 ASN n 1 84 VAL n 1 85 SER n 1 86 LEU n 1 87 ASN n 1 88 ASN n 1 89 LYS n 1 90 ARG n 1 91 ASN n 1 92 GLU n 1 93 TRP n 1 94 ASN n 1 95 ILE n 1 96 ASN n 1 97 LEU n 1 98 ASN n 1 99 GLU n 1 100 LYS n 1 101 ILE n 1 102 PRO n 1 103 THR n 1 104 GLU n 1 105 ILE n 1 106 LYS n 1 107 LEU n 1 108 SER n 1 109 LEU n 1 110 GLY n 1 111 THR n 1 112 GLY n 1 113 GLU n 1 114 PHE n 1 115 LYS n 1 116 ALA n 1 117 ASP n 1 118 LEU n 1 119 SER n 1 120 LYS n 1 121 ILE n 1 122 ASN n 1 123 LEU n 1 124 LYS n 1 125 GLU n 1 126 LEU n 1 127 ASN n 1 128 VAL n 1 129 GLY n 1 130 MSE n 1 131 GLY n 1 132 VAL n 1 133 GLY n 1 134 LYS n 1 135 VAL n 1 136 ASP n 1 137 LEU n 1 138 ASP n 1 139 ILE n 1 140 SER n 1 141 GLY n 1 142 ASN n 1 143 TYR n 1 144 LYS n 1 145 ASN n 1 146 ASN n 1 147 VAL n 1 148 LYS n 1 149 VAL n 1 150 ASN n 1 151 ILE n 1 152 GLU n 1 153 GLY n 1 154 GLY n 1 155 VAL n 1 156 GLY n 1 157 GLU n 1 158 ALA n 1 159 THR n 1 160 VAL n 1 161 TYR n 1 162 LEU n 1 163 PRO n 1 164 LYS n 1 165 SER n 1 166 ILE n 1 167 GLY n 1 168 VAL n 1 169 LYS n 1 170 ILE n 1 171 LYS n 1 172 ALA n 1 173 GLU n 1 174 LYS n 1 175 GLY n 1 176 VAL n 1 177 GLY n 1 178 ALA n 1 179 VAL n 1 180 ASN n 1 181 ALA n 1 182 ASN n 1 183 GLY n 1 184 PHE n 1 185 ILE n 1 186 VAL n 1 187 GLU n 1 188 GLY n 1 189 GLU n 1 190 ASN n 1 191 ILE n 1 192 TYR n 1 193 LYS n 1 194 ASN n 1 195 SER n 1 196 GLN n 1 197 TYR n 1 198 GLY n 1 199 LYS n 1 200 SER n 1 201 LYS n 1 202 ASN n 1 203 SER n 1 204 ILE n 1 205 GLU n 1 206 VAL n 1 207 ASN n 1 208 ILE n 1 209 GLU n 1 210 ALA n 1 211 GLY n 1 212 VAL n 1 213 GLY n 1 214 ALA n 1 215 ILE n 1 216 ASN n 1 217 ILE n 1 218 LYS n 1 219 GLN n 1 220 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CLOSPO_03726, ZP_02996603.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium sporogenes ATCC 15579' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 471871 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code J7TBR0_CLOSG _struct_ref.pdbx_db_accession J7TBR0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKS GNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGNYKNNVKVNIEGGVGEATVY LPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QRK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession J7TBR0 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 247 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4QRK _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code J7TBR0 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4QRK # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.43 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 64.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details ;0.16M calcium acetate, 20.0% Glycerol, 14.4000% polyethylene glycol 8000, 0.1M sodium cacodylate pH 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH 6.5 # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2014-05-08 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.95369 1.0 2 0.97939 1.0 3 0.97920 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.pdbx_wavelength_list 0.95369,0.97939,0.97920 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.95 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 7.400 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4QRK _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rsym_value 0.100 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 23708 _reflns.d_resolution_low 62.656 _reflns.pdbx_redundancy 4.700 _reflns.number_obs 23708 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.950 2.000 ? 8184 ? 0.820 0.9 0.820 ? 4.700 ? 1740 100.000 1 1 2.000 2.060 ? 8077 ? 0.655 1.1 0.655 ? 4.700 ? 1716 100.000 2 1 2.060 2.120 ? 7799 ? 0.552 1.3 0.552 ? 4.700 ? 1644 100.000 3 1 2.120 2.180 ? 7530 ? 0.409 1.8 0.409 ? 4.700 ? 1595 100.000 4 1 2.180 2.250 ? 7436 ? 0.307 2.4 0.307 ? 4.700 ? 1579 100.000 5 1 2.250 2.330 ? 7181 ? 0.267 2.8 0.267 ? 4.800 ? 1510 100.000 6 1 2.330 2.420 ? 6934 ? 0.248 3.0 0.248 ? 4.700 ? 1464 100.000 7 1 2.420 2.520 ? 6578 ? 0.230 3.3 0.230 ? 4.800 ? 1384 100.000 8 1 2.520 2.630 ? 6382 ? 0.206 3.7 0.206 ? 4.800 ? 1341 100.000 9 1 2.630 2.760 ? 6109 ? 0.173 4.3 0.173 ? 4.800 ? 1286 100.000 10 1 2.760 2.910 ? 5876 ? 0.126 5.9 0.126 ? 4.800 ? 1233 100.000 11 1 2.910 3.080 ? 5498 ? 0.111 6.6 0.111 ? 4.800 ? 1152 100.000 12 1 3.080 3.300 ? 5269 ? 0.091 6.9 0.091 ? 4.800 ? 1107 100.000 13 1 3.300 3.560 ? 4790 ? 0.082 7.4 0.082 ? 4.800 ? 1003 100.000 14 1 3.560 3.900 ? 4426 ? 0.063 8.4 0.063 ? 4.800 ? 928 100.000 15 1 3.900 4.360 ? 4105 ? 0.051 11.2 0.051 ? 4.800 ? 860 100.000 16 1 4.360 5.040 ? 3570 ? 0.041 11.8 0.041 ? 4.700 ? 756 100.000 17 1 5.040 6.170 ? 2958 ? 0.047 13.0 0.047 ? 4.700 ? 625 100.000 18 1 6.170 8.720 ? 2354 ? 0.058 10.1 0.058 ? 4.700 ? 503 100.000 19 1 8.720 62.656 ? 1260 ? 0.062 8.3 0.062 ? 4.500 ? 282 99.800 20 1 # _refine.ls_percent_reflns_R_free 5.1500 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_R_Free_selection_details ? _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4QRK _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.1800 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values MLHL _refine.aniso_B[3][3] ? _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1668 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1216 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.420 _refine.ls_percent_reflns_obs 99.8800 _refine.ls_R_factor_R_work 0.1647 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.9500 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 16.450 _refine.occupancy_min 0.370 _refine.B_iso_mean 39.8944 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] ? _refine.B_iso_max 137.850 _refine.ls_d_res_low 62.656 _refine.pdbx_overall_phase_error 19.7500 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2064 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 23634 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. CALCIUM (CA) AND ACETATE (ACT) IONS FROM THE CRYSTALLIZATION SOLUTION ARE MODELED. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1628 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 1791 _refine_hist.d_res_high 1.9500 _refine_hist.d_res_low 62.656 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1699 0.014 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2292 1.548 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 255 0.090 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 301 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 674 15.357 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.9501 2.0282 9 100.0000 2478 . 0.2368 0.2534 . 121 . 2599 . . 'X-RAY DIFFRACTION' 2.0282 2.1205 9 100.0000 2490 . 0.2205 0.2470 . 141 . 2631 . . 'X-RAY DIFFRACTION' 2.1205 2.2323 9 100.0000 2482 . 0.1894 0.2663 . 125 . 2607 . . 'X-RAY DIFFRACTION' 2.2323 2.3721 9 100.0000 2488 . 0.1697 0.1945 . 134 . 2622 . . 'X-RAY DIFFRACTION' 2.3721 2.5552 9 100.0000 2484 . 0.1721 0.2456 . 141 . 2625 . . 'X-RAY DIFFRACTION' 2.5552 2.8123 9 100.0000 2456 . 0.1675 0.2373 . 161 . 2617 . . 'X-RAY DIFFRACTION' 2.8123 3.2191 9 100.0000 2491 . 0.1626 0.1899 . 137 . 2628 . . 'X-RAY DIFFRACTION' 3.2191 4.0552 9 100.0000 2509 . 0.1370 0.1802 . 142 . 2651 . . 'X-RAY DIFFRACTION' 4.0552 41.2304 9 100.0000 2540 . 0.1559 0.1848 . 114 . 2654 . . 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a putative cell adhesion protein (CLOSPO_03726) from Clostridium sporogenes ATCC 15579 at 1.95 A resolution' _struct.entry_id 4QRK _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y # _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;Right-handed beta-helix, PF09922 family, DUF2154, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, CELL ADHESION ; _struct_keywords.entry_id 4QRK # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 54 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 58 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLU _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 81 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 85 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 45 C ? ? ? 1_555 A MSE 46 N ? ? A LEU 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 46 C ? ? ? 1_555 A LYS 47 N ? ? A MSE 73 A LYS 74 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale3 covale both ? A GLY 129 C ? ? ? 1_555 A MSE 130 N ? ? A GLY 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale4 covale both ? A MSE 130 C ? ? ? 1_555 A GLY 131 N ? ? A MSE 157 A GLY 158 1_555 ? ? ? ? ? ? ? 1.334 ? ? metalc1 metalc ? ? A GLU 152 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 179 A CA 300 1_555 ? ? ? ? ? ? ? 2.741 ? ? metalc2 metalc ? ? A GLU 152 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 179 A CA 300 1_555 ? ? ? ? ? ? ? 2.892 ? ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 C ACT . O ? ? A CA 300 A ACT 301 1_555 ? ? ? ? ? ? ? 2.685 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 C ACT . OXT ? ? A CA 300 A ACT 301 1_555 ? ? ? ? ? ? ? 3.085 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 300 A HOH 401 1_555 ? ? ? ? ? ? ? 2.594 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 300 A HOH 402 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 300 A HOH 403 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc8 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 300 A HOH 405 1_555 ? ? ? ? ? ? ? 2.552 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 11 ? VAL A 17 ? LYS A 38 VAL A 44 A 2 MSE A 46 ? TYR A 52 ? MSE A 73 TYR A 79 A 3 ASN A 91 ? ASN A 98 ? ASN A 118 ASN A 125 A 4 LYS A 24 ? GLU A 42 ? LYS A 51 GLU A 69 A 5 THR A 103 ? ASP A 117 ? THR A 130 ASP A 144 A 6 LEU A 123 ? ASP A 138 ? LEU A 150 ASP A 165 A 7 VAL A 147 ? PRO A 163 ? VAL A 174 PRO A 190 A 8 ILE A 215 ? LYS A 220 ? ILE A 242 LYS A 247 A 9 VAL A 179 ? ASN A 180 ? VAL A 206 ASN A 207 B 1 GLU A 60 ? LYS A 66 ? GLU A 87 LYS A 93 B 2 ASP A 69 ? SER A 75 ? ASP A 96 SER A 102 B 3 LYS A 24 ? GLU A 42 ? LYS A 51 GLU A 69 B 4 THR A 103 ? ASP A 117 ? THR A 130 ASP A 144 B 5 LEU A 123 ? ASP A 138 ? LEU A 150 ASP A 165 B 6 VAL A 147 ? PRO A 163 ? VAL A 174 PRO A 190 B 7 SER A 203 ? VAL A 212 ? SER A 230 VAL A 239 B 8 GLY A 167 ? VAL A 176 ? GLY A 194 VAL A 203 B 9 ILE A 191 ? LYS A 193 ? ILE A 218 LYS A 220 B 10 ILE A 185 ? GLU A 187 ? ILE A 212 GLU A 214 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 13 ? N GLU A 40 O PHE A 50 ? O PHE A 77 A 2 3 N LYS A 47 ? N LYS A 74 O ASN A 96 ? O ASN A 123 A 3 4 O ILE A 95 ? O ILE A 122 N ASN A 37 ? N ASN A 64 A 4 5 N LEU A 29 ? N LEU A 56 O LYS A 106 ? O LYS A 133 A 5 6 N THR A 103 ? N THR A 130 O LYS A 124 ? O LYS A 151 A 6 7 N LEU A 137 ? N LEU A 164 O THR A 159 ? O THR A 186 A 7 8 N ALA A 158 ? N ALA A 185 O ASN A 216 ? O ASN A 243 A 8 9 O ILE A 215 ? O ILE A 242 N ASN A 180 ? N ASN A 207 B 1 2 N LYS A 62 ? N LYS A 89 O GLU A 73 ? O GLU A 100 B 2 3 O GLY A 70 ? O GLY A 97 N LYS A 24 ? N LYS A 51 B 3 4 N LEU A 29 ? N LEU A 56 O LYS A 106 ? O LYS A 133 B 4 5 N THR A 103 ? N THR A 130 O LYS A 124 ? O LYS A 151 B 5 6 N LEU A 137 ? N LEU A 164 O THR A 159 ? O THR A 186 B 6 7 N GLY A 156 ? N GLY A 183 O VAL A 212 ? O VAL A 239 B 7 8 O VAL A 206 ? O VAL A 233 N LYS A 171 ? N LYS A 198 B 8 9 N ILE A 170 ? N ILE A 197 O TYR A 192 ? O TYR A 219 B 9 10 O ILE A 191 ? O ILE A 218 N GLU A 187 ? N GLU A 214 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 300 ? 6 'BINDING SITE FOR RESIDUE CA A 300' AC2 Software A ACT 301 ? 5 'BINDING SITE FOR RESIDUE ACT A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 152 ? GLU A 179 . ? 1_555 ? 2 AC1 6 ACT C . ? ACT A 301 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 401 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 402 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 403 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 405 . ? 1_555 ? 7 AC2 5 ASN A 41 ? ASN A 68 . ? 6_555 ? 8 AC2 5 GLU A 99 ? GLU A 126 . ? 6_555 ? 9 AC2 5 GLU A 152 ? GLU A 179 . ? 1_555 ? 10 AC2 5 CA B . ? CA A 300 . ? 1_555 ? 11 AC2 5 HOH D . ? HOH A 405 . ? 1_555 ? # _atom_sites.entry_id 4QRK _atom_sites.fract_transf_matrix[1][1] 0.013822 _atom_sites.fract_transf_matrix[1][2] 0.007980 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015960 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009135 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 THR 2 29 ? ? ? A . n A 1 3 VAL 3 30 ? ? ? A . n A 1 4 SER 4 31 ? ? ? A . n A 1 5 ASP 5 32 ? ? ? A . n A 1 6 THR 6 33 ? ? ? A . n A 1 7 ASN 7 34 ? ? ? A . n A 1 8 GLU 8 35 ? ? ? A . n A 1 9 LYS 9 36 36 LYS LYS A . n A 1 10 PRO 10 37 37 PRO PRO A . n A 1 11 LYS 11 38 38 LYS LYS A . n A 1 12 GLU 12 39 39 GLU GLU A . n A 1 13 GLU 13 40 40 GLU GLU A . n A 1 14 ILE 14 41 41 ILE ILE A . n A 1 15 LYS 15 42 42 LYS LYS A . n A 1 16 ILE 16 43 43 ILE ILE A . n A 1 17 VAL 17 44 44 VAL VAL A . n A 1 18 GLU 18 45 45 GLU GLU A . n A 1 19 PRO 19 46 46 PRO PRO A . n A 1 20 ASN 20 47 47 ASN ASN A . n A 1 21 GLY 21 48 48 GLY GLY A . n A 1 22 ALA 22 49 49 ALA ALA A . n A 1 23 GLU 23 50 50 GLU GLU A . n A 1 24 LYS 24 51 51 LYS LYS A . n A 1 25 THR 25 52 52 THR THR A . n A 1 26 LYS 26 53 53 LYS LYS A . n A 1 27 LEU 27 54 54 LEU LEU A . n A 1 28 ASN 28 55 55 ASN ASN A . n A 1 29 LEU 29 56 56 LEU LEU A . n A 1 30 ASN 30 57 57 ASN ASN A . n A 1 31 PHE 31 58 58 PHE PHE A . n A 1 32 GLY 32 59 59 GLY GLY A . n A 1 33 VAL 33 60 60 VAL VAL A . n A 1 34 GLY 34 61 61 GLY GLY A . n A 1 35 LYS 35 62 62 LYS LYS A . n A 1 36 LEU 36 63 63 LEU LEU A . n A 1 37 ASN 37 64 64 ASN ASN A . n A 1 38 ILE 38 65 65 ILE ILE A . n A 1 39 SER 39 66 66 SER SER A . n A 1 40 GLY 40 67 67 GLY GLY A . n A 1 41 ASN 41 68 68 ASN ASN A . n A 1 42 GLU 42 69 69 GLU GLU A . n A 1 43 GLU 43 70 70 GLU GLU A . n A 1 44 LYS 44 71 71 LYS LYS A . n A 1 45 LEU 45 72 72 LEU LEU A . n A 1 46 MSE 46 73 73 MSE MSE A . n A 1 47 LYS 47 74 74 LYS LYS A . n A 1 48 GLY 48 75 75 GLY GLY A . n A 1 49 LYS 49 76 76 LYS LYS A . n A 1 50 PHE 50 77 77 PHE PHE A . n A 1 51 ILE 51 78 78 ILE ILE A . n A 1 52 TYR 52 79 79 TYR TYR A . n A 1 53 SER 53 80 80 SER SER A . n A 1 54 GLU 54 81 81 GLU GLU A . n A 1 55 ASN 55 82 82 ASN ASN A . n A 1 56 GLU 56 83 83 GLU GLU A . n A 1 57 TRP 57 84 84 TRP TRP A . n A 1 58 LYS 58 85 85 LYS LYS A . n A 1 59 PRO 59 86 86 PRO PRO A . n A 1 60 GLU 60 87 87 GLU GLU A . n A 1 61 ILE 61 88 88 ILE ILE A . n A 1 62 LYS 62 89 89 LYS LYS A . n A 1 63 TYR 63 90 90 TYR TYR A . n A 1 64 GLU 64 91 91 GLU GLU A . n A 1 65 VAL 65 92 92 VAL VAL A . n A 1 66 LYS 66 93 93 LYS LYS A . n A 1 67 ASP 67 94 94 ASP ASP A . n A 1 68 LYS 68 95 95 LYS LYS A . n A 1 69 ASP 69 96 96 ASP ASP A . n A 1 70 GLY 70 97 97 GLY GLY A . n A 1 71 GLU 71 98 98 GLU GLU A . n A 1 72 LEU 72 99 99 LEU LEU A . n A 1 73 GLU 73 100 100 GLU GLU A . n A 1 74 ILE 74 101 101 ILE ILE A . n A 1 75 SER 75 102 102 SER SER A . n A 1 76 GLN 76 103 103 GLN GLN A . n A 1 77 PRO 77 104 104 PRO PRO A . n A 1 78 GLY 78 105 105 GLY GLY A . n A 1 79 LEU 79 106 106 LEU LEU A . n A 1 80 LYS 80 107 107 LYS LYS A . n A 1 81 SER 81 108 108 SER SER A . n A 1 82 GLY 82 109 109 GLY GLY A . n A 1 83 ASN 83 110 110 ASN ASN A . n A 1 84 VAL 84 111 111 VAL VAL A . n A 1 85 SER 85 112 112 SER SER A . n A 1 86 LEU 86 113 113 LEU LEU A . n A 1 87 ASN 87 114 114 ASN ASN A . n A 1 88 ASN 88 115 115 ASN ASN A . n A 1 89 LYS 89 116 116 LYS LYS A . n A 1 90 ARG 90 117 117 ARG ARG A . n A 1 91 ASN 91 118 118 ASN ASN A . n A 1 92 GLU 92 119 119 GLU GLU A . n A 1 93 TRP 93 120 120 TRP TRP A . n A 1 94 ASN 94 121 121 ASN ASN A . n A 1 95 ILE 95 122 122 ILE ILE A . n A 1 96 ASN 96 123 123 ASN ASN A . n A 1 97 LEU 97 124 124 LEU LEU A . n A 1 98 ASN 98 125 125 ASN ASN A . n A 1 99 GLU 99 126 126 GLU GLU A . n A 1 100 LYS 100 127 127 LYS LYS A . n A 1 101 ILE 101 128 128 ILE ILE A . n A 1 102 PRO 102 129 129 PRO PRO A . n A 1 103 THR 103 130 130 THR THR A . n A 1 104 GLU 104 131 131 GLU GLU A . n A 1 105 ILE 105 132 132 ILE ILE A . n A 1 106 LYS 106 133 133 LYS LYS A . n A 1 107 LEU 107 134 134 LEU LEU A . n A 1 108 SER 108 135 135 SER SER A . n A 1 109 LEU 109 136 136 LEU LEU A . n A 1 110 GLY 110 137 137 GLY GLY A . n A 1 111 THR 111 138 138 THR THR A . n A 1 112 GLY 112 139 139 GLY GLY A . n A 1 113 GLU 113 140 140 GLU GLU A . n A 1 114 PHE 114 141 141 PHE PHE A . n A 1 115 LYS 115 142 142 LYS LYS A . n A 1 116 ALA 116 143 143 ALA ALA A . n A 1 117 ASP 117 144 144 ASP ASP A . n A 1 118 LEU 118 145 145 LEU LEU A . n A 1 119 SER 119 146 146 SER SER A . n A 1 120 LYS 120 147 147 LYS LYS A . n A 1 121 ILE 121 148 148 ILE ILE A . n A 1 122 ASN 122 149 149 ASN ASN A . n A 1 123 LEU 123 150 150 LEU LEU A . n A 1 124 LYS 124 151 151 LYS LYS A . n A 1 125 GLU 125 152 152 GLU GLU A . n A 1 126 LEU 126 153 153 LEU LEU A . n A 1 127 ASN 127 154 154 ASN ASN A . n A 1 128 VAL 128 155 155 VAL VAL A . n A 1 129 GLY 129 156 156 GLY GLY A . n A 1 130 MSE 130 157 157 MSE MSE A . n A 1 131 GLY 131 158 158 GLY GLY A . n A 1 132 VAL 132 159 159 VAL VAL A . n A 1 133 GLY 133 160 160 GLY GLY A . n A 1 134 LYS 134 161 161 LYS LYS A . n A 1 135 VAL 135 162 162 VAL VAL A . n A 1 136 ASP 136 163 163 ASP ASP A . n A 1 137 LEU 137 164 164 LEU LEU A . n A 1 138 ASP 138 165 165 ASP ASP A . n A 1 139 ILE 139 166 166 ILE ILE A . n A 1 140 SER 140 167 167 SER SER A . n A 1 141 GLY 141 168 168 GLY GLY A . n A 1 142 ASN 142 169 169 ASN ASN A . n A 1 143 TYR 143 170 170 TYR TYR A . n A 1 144 LYS 144 171 171 LYS LYS A . n A 1 145 ASN 145 172 172 ASN ASN A . n A 1 146 ASN 146 173 173 ASN ASN A . n A 1 147 VAL 147 174 174 VAL VAL A . n A 1 148 LYS 148 175 175 LYS LYS A . n A 1 149 VAL 149 176 176 VAL VAL A . n A 1 150 ASN 150 177 177 ASN ASN A . n A 1 151 ILE 151 178 178 ILE ILE A . n A 1 152 GLU 152 179 179 GLU GLU A . n A 1 153 GLY 153 180 180 GLY GLY A . n A 1 154 GLY 154 181 181 GLY GLY A . n A 1 155 VAL 155 182 182 VAL VAL A . n A 1 156 GLY 156 183 183 GLY GLY A . n A 1 157 GLU 157 184 184 GLU GLU A . n A 1 158 ALA 158 185 185 ALA ALA A . n A 1 159 THR 159 186 186 THR THR A . n A 1 160 VAL 160 187 187 VAL VAL A . n A 1 161 TYR 161 188 188 TYR TYR A . n A 1 162 LEU 162 189 189 LEU LEU A . n A 1 163 PRO 163 190 190 PRO PRO A . n A 1 164 LYS 164 191 191 LYS LYS A . n A 1 165 SER 165 192 192 SER SER A . n A 1 166 ILE 166 193 193 ILE ILE A . n A 1 167 GLY 167 194 194 GLY GLY A . n A 1 168 VAL 168 195 195 VAL VAL A . n A 1 169 LYS 169 196 196 LYS LYS A . n A 1 170 ILE 170 197 197 ILE ILE A . n A 1 171 LYS 171 198 198 LYS LYS A . n A 1 172 ALA 172 199 199 ALA ALA A . n A 1 173 GLU 173 200 200 GLU GLU A . n A 1 174 LYS 174 201 201 LYS LYS A . n A 1 175 GLY 175 202 202 GLY GLY A . n A 1 176 VAL 176 203 203 VAL VAL A . n A 1 177 GLY 177 204 204 GLY GLY A . n A 1 178 ALA 178 205 205 ALA ALA A . n A 1 179 VAL 179 206 206 VAL VAL A . n A 1 180 ASN 180 207 207 ASN ASN A . n A 1 181 ALA 181 208 208 ALA ALA A . n A 1 182 ASN 182 209 209 ASN ASN A . n A 1 183 GLY 183 210 210 GLY GLY A . n A 1 184 PHE 184 211 211 PHE PHE A . n A 1 185 ILE 185 212 212 ILE ILE A . n A 1 186 VAL 186 213 213 VAL VAL A . n A 1 187 GLU 187 214 214 GLU GLU A . n A 1 188 GLY 188 215 215 GLY GLY A . n A 1 189 GLU 189 216 216 GLU GLU A . n A 1 190 ASN 190 217 217 ASN ASN A . n A 1 191 ILE 191 218 218 ILE ILE A . n A 1 192 TYR 192 219 219 TYR TYR A . n A 1 193 LYS 193 220 220 LYS LYS A . n A 1 194 ASN 194 221 221 ASN ASN A . n A 1 195 SER 195 222 222 SER SER A . n A 1 196 GLN 196 223 223 GLN GLN A . n A 1 197 TYR 197 224 224 TYR TYR A . n A 1 198 GLY 198 225 225 GLY GLY A . n A 1 199 LYS 199 226 226 LYS LYS A . n A 1 200 SER 200 227 227 SER SER A . n A 1 201 LYS 201 228 228 LYS LYS A . n A 1 202 ASN 202 229 229 ASN ASN A . n A 1 203 SER 203 230 230 SER SER A . n A 1 204 ILE 204 231 231 ILE ILE A . n A 1 205 GLU 205 232 232 GLU GLU A . n A 1 206 VAL 206 233 233 VAL VAL A . n A 1 207 ASN 207 234 234 ASN ASN A . n A 1 208 ILE 208 235 235 ILE ILE A . n A 1 209 GLU 209 236 236 GLU GLU A . n A 1 210 ALA 210 237 237 ALA ALA A . n A 1 211 GLY 211 238 238 GLY GLY A . n A 1 212 VAL 212 239 239 VAL VAL A . n A 1 213 GLY 213 240 240 GLY GLY A . n A 1 214 ALA 214 241 241 ALA ALA A . n A 1 215 ILE 215 242 242 ILE ILE A . n A 1 216 ASN 216 243 243 ASN ASN A . n A 1 217 ILE 217 244 244 ILE ILE A . n A 1 218 LYS 218 245 245 LYS LYS A . n A 1 219 GLN 219 246 246 GLN GLN A . n A 1 220 LYS 220 247 247 LYS LYS A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 300 300 CA CA A . C 3 ACT 1 301 301 ACT ACT A . D 4 HOH 1 401 302 HOH HOH A . D 4 HOH 2 402 303 HOH HOH A . D 4 HOH 3 403 304 HOH HOH A . D 4 HOH 4 404 305 HOH HOH A . D 4 HOH 5 405 306 HOH HOH A . D 4 HOH 6 406 307 HOH HOH A . D 4 HOH 7 407 308 HOH HOH A . D 4 HOH 8 408 309 HOH HOH A . D 4 HOH 9 409 310 HOH HOH A . D 4 HOH 10 410 311 HOH HOH A . D 4 HOH 11 411 312 HOH HOH A . D 4 HOH 12 412 313 HOH HOH A . D 4 HOH 13 413 314 HOH HOH A . D 4 HOH 14 414 315 HOH HOH A . D 4 HOH 15 415 316 HOH HOH A . D 4 HOH 16 416 317 HOH HOH A . D 4 HOH 17 417 318 HOH HOH A . D 4 HOH 18 418 319 HOH HOH A . D 4 HOH 19 419 320 HOH HOH A . D 4 HOH 20 420 321 HOH HOH A . D 4 HOH 21 421 322 HOH HOH A . D 4 HOH 22 422 323 HOH HOH A . D 4 HOH 23 423 324 HOH HOH A . D 4 HOH 24 424 325 HOH HOH A . D 4 HOH 25 425 326 HOH HOH A . D 4 HOH 26 426 327 HOH HOH A . D 4 HOH 27 427 328 HOH HOH A . D 4 HOH 28 428 329 HOH HOH A . D 4 HOH 29 429 330 HOH HOH A . D 4 HOH 30 430 331 HOH HOH A . D 4 HOH 31 431 332 HOH HOH A . D 4 HOH 32 432 333 HOH HOH A . D 4 HOH 33 433 334 HOH HOH A . D 4 HOH 34 434 335 HOH HOH A . D 4 HOH 35 435 336 HOH HOH A . D 4 HOH 36 436 337 HOH HOH A . D 4 HOH 37 437 338 HOH HOH A . D 4 HOH 38 438 339 HOH HOH A . D 4 HOH 39 439 340 HOH HOH A . D 4 HOH 40 440 341 HOH HOH A . D 4 HOH 41 441 342 HOH HOH A . D 4 HOH 42 442 343 HOH HOH A . D 4 HOH 43 443 344 HOH HOH A . D 4 HOH 44 444 345 HOH HOH A . D 4 HOH 45 445 346 HOH HOH A . D 4 HOH 46 446 347 HOH HOH A . D 4 HOH 47 447 348 HOH HOH A . D 4 HOH 48 448 349 HOH HOH A . D 4 HOH 49 449 350 HOH HOH A . D 4 HOH 50 450 351 HOH HOH A . D 4 HOH 51 451 352 HOH HOH A . D 4 HOH 52 452 353 HOH HOH A . D 4 HOH 53 453 354 HOH HOH A . D 4 HOH 54 454 355 HOH HOH A . D 4 HOH 55 455 356 HOH HOH A . D 4 HOH 56 456 357 HOH HOH A . D 4 HOH 57 457 358 HOH HOH A . D 4 HOH 58 458 359 HOH HOH A . D 4 HOH 59 459 360 HOH HOH A . D 4 HOH 60 460 361 HOH HOH A . D 4 HOH 61 461 362 HOH HOH A . D 4 HOH 62 462 363 HOH HOH A . D 4 HOH 63 463 364 HOH HOH A . D 4 HOH 64 464 365 HOH HOH A . D 4 HOH 65 465 366 HOH HOH A . D 4 HOH 66 466 367 HOH HOH A . D 4 HOH 67 467 368 HOH HOH A . D 4 HOH 68 468 369 HOH HOH A . D 4 HOH 69 469 370 HOH HOH A . D 4 HOH 70 470 371 HOH HOH A . D 4 HOH 71 471 372 HOH HOH A . D 4 HOH 72 472 373 HOH HOH A . D 4 HOH 73 473 374 HOH HOH A . D 4 HOH 74 474 375 HOH HOH A . D 4 HOH 75 475 376 HOH HOH A . D 4 HOH 76 476 377 HOH HOH A . D 4 HOH 77 477 378 HOH HOH A . D 4 HOH 78 478 379 HOH HOH A . D 4 HOH 79 479 380 HOH HOH A . D 4 HOH 80 480 381 HOH HOH A . D 4 HOH 81 481 382 HOH HOH A . D 4 HOH 82 482 383 HOH HOH A . D 4 HOH 83 483 384 HOH HOH A . D 4 HOH 84 484 385 HOH HOH A . D 4 HOH 85 485 386 HOH HOH A . D 4 HOH 86 486 387 HOH HOH A . D 4 HOH 87 487 388 HOH HOH A . D 4 HOH 88 488 389 HOH HOH A . D 4 HOH 89 489 390 HOH HOH A . D 4 HOH 90 490 391 HOH HOH A . D 4 HOH 91 491 392 HOH HOH A . D 4 HOH 92 492 393 HOH HOH A . D 4 HOH 93 493 394 HOH HOH A . D 4 HOH 94 494 395 HOH HOH A . D 4 HOH 95 495 396 HOH HOH A . D 4 HOH 96 496 397 HOH HOH A . D 4 HOH 97 497 398 HOH HOH A . D 4 HOH 98 498 399 HOH HOH A . D 4 HOH 99 499 400 HOH HOH A . D 4 HOH 100 500 401 HOH HOH A . D 4 HOH 101 501 402 HOH HOH A . D 4 HOH 102 502 403 HOH HOH A . D 4 HOH 103 503 404 HOH HOH A . D 4 HOH 104 504 405 HOH HOH A . D 4 HOH 105 505 406 HOH HOH A . D 4 HOH 106 506 407 HOH HOH A . D 4 HOH 107 507 408 HOH HOH A . D 4 HOH 108 508 409 HOH HOH A . D 4 HOH 109 509 410 HOH HOH A . D 4 HOH 110 510 411 HOH HOH A . D 4 HOH 111 511 412 HOH HOH A . D 4 HOH 112 512 413 HOH HOH A . D 4 HOH 113 513 414 HOH HOH A . D 4 HOH 114 514 415 HOH HOH A . D 4 HOH 115 515 416 HOH HOH A . D 4 HOH 116 516 417 HOH HOH A . D 4 HOH 117 517 418 HOH HOH A . D 4 HOH 118 518 419 HOH HOH A . D 4 HOH 119 519 420 HOH HOH A . D 4 HOH 120 520 421 HOH HOH A . D 4 HOH 121 521 422 HOH HOH A . D 4 HOH 122 522 423 HOH HOH A . D 4 HOH 123 523 424 HOH HOH A . D 4 HOH 124 524 425 HOH HOH A . D 4 HOH 125 525 426 HOH HOH A . D 4 HOH 126 526 427 HOH HOH A . D 4 HOH 127 527 428 HOH HOH A . D 4 HOH 128 528 429 HOH HOH A . D 4 HOH 129 529 430 HOH HOH A . D 4 HOH 130 530 431 HOH HOH A . D 4 HOH 131 531 432 HOH HOH A . D 4 HOH 132 532 433 HOH HOH A . D 4 HOH 133 533 434 HOH HOH A . D 4 HOH 134 534 435 HOH HOH A . D 4 HOH 135 535 436 HOH HOH A . D 4 HOH 136 536 437 HOH HOH A . D 4 HOH 137 537 438 HOH HOH A . D 4 HOH 138 538 439 HOH HOH A . D 4 HOH 139 539 440 HOH HOH A . D 4 HOH 140 540 441 HOH HOH A . D 4 HOH 141 541 442 HOH HOH A . D 4 HOH 142 542 443 HOH HOH A . D 4 HOH 143 543 444 HOH HOH A . D 4 HOH 144 544 445 HOH HOH A . D 4 HOH 145 545 446 HOH HOH A . D 4 HOH 146 546 447 HOH HOH A . D 4 HOH 147 547 448 HOH HOH A . D 4 HOH 148 548 449 HOH HOH A . D 4 HOH 149 549 450 HOH HOH A . D 4 HOH 150 550 451 HOH HOH A . D 4 HOH 151 551 452 HOH HOH A . D 4 HOH 152 552 453 HOH HOH A . D 4 HOH 153 553 454 HOH HOH A . D 4 HOH 154 554 455 HOH HOH A . D 4 HOH 155 555 456 HOH HOH A . D 4 HOH 156 556 457 HOH HOH A . D 4 HOH 157 557 458 HOH HOH A . D 4 HOH 158 558 459 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 46 A MSE 73 ? MET SELENOMETHIONINE 2 A MSE 130 A MSE 157 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 46.5 ? 2 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? C ACT . ? A ACT 301 ? 1_555 79.9 ? 3 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? C ACT . ? A ACT 301 ? 1_555 63.6 ? 4 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 OXT ? C ACT . ? A ACT 301 ? 1_555 82.9 ? 5 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 OXT ? C ACT . ? A ACT 301 ? 1_555 96.6 ? 6 O ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 OXT ? C ACT . ? A ACT 301 ? 1_555 42.6 ? 7 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 117.5 ? 8 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 71.1 ? 9 O ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 75.2 ? 10 OXT ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 111.2 ? 11 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 402 ? 1_555 77.9 ? 12 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 402 ? 1_555 65.3 ? 13 O ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 402 ? 1_555 126.0 ? 14 OXT ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 402 ? 1_555 159.7 ? 15 O ? D HOH . ? A HOH 401 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 402 ? 1_555 72.8 ? 16 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 94.9 ? 17 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 118.9 ? 18 O ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 169.5 ? 19 OXT ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 128.1 ? 20 O ? D HOH . ? A HOH 401 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 115.3 ? 21 O ? D HOH . ? A HOH 402 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 403 ? 1_555 60.8 ? 22 OE1 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 151.8 ? 23 OE2 ? A GLU 152 ? A GLU 179 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 129.2 ? 24 O ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 75.9 ? 25 OXT ? C ACT . ? A ACT 301 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 69.6 ? 26 O ? D HOH . ? A HOH 401 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 69.7 ? 27 O ? D HOH . ? A HOH 402 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 128.5 ? 28 O ? D HOH . ? A HOH 403 ? 1_555 CA ? B CA . ? A CA 300 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 106.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-23 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.value' 19 5 'Structure model' '_struct_conn.pdbx_dist_value' 20 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 5 'Structure model' '_struct_ref_seq_dif.details' 33 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 20.2128 _pdbx_refine_tls.origin_y 12.9512 _pdbx_refine_tls.origin_z 15.7039 _pdbx_refine_tls.T[1][1] 0.1918 _pdbx_refine_tls.T[2][2] 0.1956 _pdbx_refine_tls.T[3][3] 0.2069 _pdbx_refine_tls.T[1][2] 0.0186 _pdbx_refine_tls.T[1][3] -0.0089 _pdbx_refine_tls.T[2][3] -0.0077 _pdbx_refine_tls.L[1][1] 0.6927 _pdbx_refine_tls.L[2][2] 0.3396 _pdbx_refine_tls.L[3][3] 0.9788 _pdbx_refine_tls.L[1][2] 0.1065 _pdbx_refine_tls.L[1][3] -0.1810 _pdbx_refine_tls.L[2][3] 0.2609 _pdbx_refine_tls.S[1][1] -0.0042 _pdbx_refine_tls.S[2][2] 0.0288 _pdbx_refine_tls.S[3][3] -0.0000 _pdbx_refine_tls.S[1][2] -0.0116 _pdbx_refine_tls.S[1][3] -0.0045 _pdbx_refine_tls.S[2][3] -0.0828 _pdbx_refine_tls.S[2][1] 0.0106 _pdbx_refine_tls.S[3][1] -0.0550 _pdbx_refine_tls.S[3][2] -0.0272 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 36 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 247 _pdbx_refine_tls_group.selection_details '(chain A and resseq 36:247)' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 5 PHENIX 1.8.2 ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 29-247 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4QRK _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 542 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 551 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_555 _pdbx_validate_symm_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 68 ? ? 71.50 40.05 2 1 LYS A 71 ? ? -79.81 -162.11 3 1 LYS A 95 ? ? 77.57 -9.19 4 1 SER A 108 ? ? 57.31 156.00 5 1 ASN A 217 ? ? 80.44 12.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 107 ? CG ? A LYS 80 CG 2 1 Y 1 A LYS 107 ? CD ? A LYS 80 CD 3 1 Y 1 A LYS 107 ? CE ? A LYS 80 CE 4 1 Y 1 A LYS 107 ? NZ ? A LYS 80 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A THR 29 ? A THR 2 3 1 Y 1 A VAL 30 ? A VAL 3 4 1 Y 1 A SER 31 ? A SER 4 5 1 Y 1 A ASP 32 ? A ASP 5 6 1 Y 1 A THR 33 ? A THR 6 7 1 Y 1 A ASN 34 ? A ASN 7 8 1 Y 1 A GLU 35 ? A GLU 8 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'ACETATE ION' ACT 4 water HOH #