data_4R4G # _entry.id 4R4G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4R4G pdb_00004r4g 10.2210/pdb4r4g/pdb RCSB RCSB086886 ? ? WWPDB D_1000086886 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-418973 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4R4G _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-08-19 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4R4G _cell.length_a 98.653 _cell.length_b 98.653 _cell.length_c 195.018 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4R4G _symmetry.Int_Tables_number 179 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative lipoprotein YcdA' 36286.562 1 ? ? ? ? 2 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 3 ? ? ? ? 3 water nat water 18.015 33 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDS(MSE)DFTLYQGDTK(MSE)S DTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSA YVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKD EAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVK(MSE)KKNDIDQWQ LD(MSE)DDYRAAELVEAFIKE ; _entity_poly.pdbx_seq_one_letter_code_can ;GEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYS EKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFG KDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATV KPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELV EAFIKE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-418973 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 LYS n 1 4 LYS n 1 5 GLU n 1 6 SER n 1 7 GLU n 1 8 THR n 1 9 GLU n 1 10 LYS n 1 11 SER n 1 12 SER n 1 13 ASP n 1 14 ILE n 1 15 ALA n 1 16 GLN n 1 17 VAL n 1 18 LYS n 1 19 ILE n 1 20 LYS n 1 21 ASP n 1 22 VAL n 1 23 SER n 1 24 TYR n 1 25 THR n 1 26 LEU n 1 27 PRO n 1 28 SER n 1 29 LYS n 1 30 TYR n 1 31 ASP n 1 32 LYS n 1 33 SER n 1 34 THR n 1 35 SER n 1 36 ASP n 1 37 ASP n 1 38 GLN n 1 39 LEU n 1 40 VAL n 1 41 LEU n 1 42 LYS n 1 43 VAL n 1 44 ASN n 1 45 VAL n 1 46 ALA n 1 47 VAL n 1 48 LYS n 1 49 ASN n 1 50 THR n 1 51 GLY n 1 52 LYS n 1 53 ASP n 1 54 PRO n 1 55 LEU n 1 56 ASN n 1 57 VAL n 1 58 ASP n 1 59 SER n 1 60 MSE n 1 61 ASP n 1 62 PHE n 1 63 THR n 1 64 LEU n 1 65 TYR n 1 66 GLN n 1 67 GLY n 1 68 ASP n 1 69 THR n 1 70 LYS n 1 71 MSE n 1 72 SER n 1 73 ASP n 1 74 THR n 1 75 ASP n 1 76 PRO n 1 77 GLU n 1 78 ASP n 1 79 TYR n 1 80 SER n 1 81 GLU n 1 82 LYS n 1 83 LEU n 1 84 GLN n 1 85 GLY n 1 86 SER n 1 87 THR n 1 88 ILE n 1 89 ASN n 1 90 ALA n 1 91 ASP n 1 92 LYS n 1 93 SER n 1 94 VAL n 1 95 GLU n 1 96 GLY n 1 97 ASN n 1 98 LEU n 1 99 PHE n 1 100 PHE n 1 101 VAL n 1 102 VAL n 1 103 ASP n 1 104 LYS n 1 105 GLY n 1 106 LYS n 1 107 GLN n 1 108 TYR n 1 109 GLU n 1 110 LEU n 1 111 ASN n 1 112 TYR n 1 113 THR n 1 114 PRO n 1 115 GLU n 1 116 SER n 1 117 TYR n 1 118 GLY n 1 119 ASP n 1 120 LYS n 1 121 LYS n 1 122 PRO n 1 123 LYS n 1 124 SER n 1 125 VAL n 1 126 THR n 1 127 PHE n 1 128 LYS n 1 129 ILE n 1 130 ASP n 1 131 GLY n 1 132 LYS n 1 133 ASP n 1 134 LYS n 1 135 LYS n 1 136 ILE n 1 137 LEU n 1 138 ALA n 1 139 THR n 1 140 ALA n 1 141 ASP n 1 142 LYS n 1 143 LEU n 1 144 GLN n 1 145 ASP n 1 146 SER n 1 147 ALA n 1 148 LYS n 1 149 ALA n 1 150 LEU n 1 151 SER n 1 152 ALA n 1 153 TYR n 1 154 VAL n 1 155 ASP n 1 156 VAL n 1 157 LEU n 1 158 LEU n 1 159 PHE n 1 160 GLY n 1 161 LYS n 1 162 ASP n 1 163 ASN n 1 164 ALA n 1 165 ASP n 1 166 PHE n 1 167 GLU n 1 168 LYS n 1 169 ILE n 1 170 THR n 1 171 GLY n 1 172 ALA n 1 173 ASN n 1 174 LYS n 1 175 ASN n 1 176 GLU n 1 177 ILE n 1 178 VAL n 1 179 ASN n 1 180 ASP n 1 181 PHE n 1 182 ASN n 1 183 GLU n 1 184 SER n 1 185 ALA n 1 186 LYS n 1 187 ASP n 1 188 GLY n 1 189 TYR n 1 190 LEU n 1 191 SER n 1 192 ALA n 1 193 SER n 1 194 GLY n 1 195 LEU n 1 196 SER n 1 197 SER n 1 198 THR n 1 199 TYR n 1 200 ALA n 1 201 ASP n 1 202 SER n 1 203 LYS n 1 204 ALA n 1 205 LEU n 1 206 ASP n 1 207 ASN n 1 208 ILE n 1 209 VAL n 1 210 ASN n 1 211 GLY n 1 212 ILE n 1 213 LYS n 1 214 GLU n 1 215 GLY n 1 216 LEU n 1 217 SER n 1 218 LYS n 1 219 ASN n 1 220 SER n 1 221 SER n 1 222 ILE n 1 223 GLN n 1 224 ALA n 1 225 LYS n 1 226 THR n 1 227 THR n 1 228 SER n 1 229 ILE n 1 230 SER n 1 231 LYS n 1 232 ASP n 1 233 GLU n 1 234 ALA n 1 235 ILE n 1 236 VAL n 1 237 GLU n 1 238 ALA n 1 239 THR n 1 240 VAL n 1 241 LYS n 1 242 PRO n 1 243 VAL n 1 244 ASP n 1 245 ALA n 1 246 SER n 1 247 SER n 1 248 LEU n 1 249 SER n 1 250 ASP n 1 251 ARG n 1 252 ILE n 1 253 GLU n 1 254 ASP n 1 255 LYS n 1 256 VAL n 1 257 LYS n 1 258 ASP n 1 259 TYR n 1 260 TYR n 1 261 SER n 1 262 LYS n 1 263 ASN n 1 264 SER n 1 265 SER n 1 266 ALA n 1 267 SER n 1 268 TYR n 1 269 GLU n 1 270 GLU n 1 271 ALA n 1 272 VAL n 1 273 LYS n 1 274 TYR n 1 275 ALA n 1 276 LEU n 1 277 GLN n 1 278 VAL n 1 279 TYR n 1 280 PRO n 1 281 GLU n 1 282 GLU n 1 283 PHE n 1 284 LYS n 1 285 LYS n 1 286 LEU n 1 287 GLY n 1 288 PRO n 1 289 ALA n 1 290 SER n 1 291 SER n 1 292 GLU n 1 293 LYS n 1 294 THR n 1 295 VAL n 1 296 GLU n 1 297 VAL n 1 298 LYS n 1 299 MSE n 1 300 LYS n 1 301 LYS n 1 302 ASN n 1 303 ASP n 1 304 ILE n 1 305 ASP n 1 306 GLN n 1 307 TRP n 1 308 GLN n 1 309 LEU n 1 310 ASP n 1 311 MSE n 1 312 ASP n 1 313 ASP n 1 314 TYR n 1 315 ARG n 1 316 ALA n 1 317 ALA n 1 318 GLU n 1 319 LEU n 1 320 VAL n 1 321 GLU n 1 322 ALA n 1 323 PHE n 1 324 ILE n 1 325 LYS n 1 326 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ycdA, BSU02780' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis str. 168' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YCDA_BACSU _struct_ref.pdbx_db_accession O34538 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSE KLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGK DNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVK PVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVE AFIKE ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4R4G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 326 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O34538 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 354 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 354 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4R4G _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O34538 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4R4G # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 3.77 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 67.42 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '50.0% polyethylene glycol 200, 0.1M TRIS pH 7.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2014-06-26 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97971 1.0 2 0.91837 1.0 3 0.97926 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97971,0.91837,0.97926 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4R4G _reflns.d_resolution_high 2.62 _reflns.d_resolution_low 49.327 _reflns.number_obs 17632 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_netI_over_sigmaI 22.880 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 84.781 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.620 2.710 21199 ? 1638 ? 0.023 1.8 ? ? ? ? ? 1640 ? ? 0.906 ? ? 99.900 2.396 ? 1 1 2.710 2.820 20805 ? 1745 ? 0.023 2.5 ? ? ? ? ? 1753 ? ? 0.888 ? ? 99.500 1.526 ? 2 1 2.820 2.950 23416 ? 1744 ? 0.023 4.0 ? ? ? ? ? 1749 ? ? 0.959 ? ? 99.700 0.926 ? 3 1 2.950 3.100 22234 ? 1667 ? 0.023 6.4 ? ? ? ? ? 1667 ? ? 0.985 ? ? 100.000 0.553 ? 4 1 3.100 3.300 23782 ? 1794 ? 0.023 10.2 ? ? ? ? ? 1795 ? ? 0.992 ? ? 99.900 0.310 ? 5 1 3.300 3.550 21857 ? 1706 ? 0.023 16.8 ? ? ? ? ? 1709 ? ? 0.997 ? ? 99.800 0.171 ? 6 1 3.550 3.910 21926 ? 1769 ? 0.023 25.5 ? ? ? ? ? 1771 ? ? 0.999 ? ? 99.900 0.095 ? 7 1 3.910 4.470 23315 ? 1772 ? 0.023 39.4 ? ? ? ? ? 1772 ? ? 0.999 ? ? 100.000 0.062 ? 8 1 4.470 5.610 21313 ? 1790 ? 0.023 48.6 ? ? ? ? ? 1793 ? ? 1.000 ? ? 99.800 0.047 ? 9 1 5.610 ? 23313 ? 1992 ? 0.023 64.8 ? ? ? ? ? 2007 ? ? 1.000 ? ? 99.300 0.031 ? 10 1 # _refine.entry_id 4R4G _refine.ls_d_res_high 2.6200 _refine.ls_d_res_low 49.327 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8700 _refine.ls_number_reflns_obs 17574 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. 4. PEG (PG4) MODELED WERE PRESENT IN CRYSTALLIZATION/CRYO CONDITIONS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2147 _refine.ls_R_factor_R_work 0.2135 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2389 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0600 _refine.ls_number_reflns_R_free 889 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 89.4081 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -13.4645 _refine.aniso_B[2][2] -13.4645 _refine.aniso_B[3][3] 26.9289 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9180 _refine.correlation_coeff_Fo_to_Fc_free 0.9075 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 166.830 _refine.B_iso_min 49.680 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.370 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4R4G _refine_analyze.Luzzati_coordinate_error_obs 0.506 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2485 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 2557 _refine_hist.d_res_high 2.6200 _refine_hist.d_res_low 49.327 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1282 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 89 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 358 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2586 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 346 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 2830 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2586 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 3479 1.210 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.080 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 3.120 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.6200 _refine_ls_shell.d_res_low 2.7800 _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.percent_reflns_obs 99.8700 _refine_ls_shell.number_reflns_R_work 2600 _refine_ls_shell.R_factor_all 0.2591 _refine_ls_shell.R_factor_R_work 0.2574 _refine_ls_shell.R_factor_R_free 0.2875 _refine_ls_shell.percent_reflns_R_free 5.6600 _refine_ls_shell.number_reflns_R_free 156 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2756 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4R4G _struct.title 'Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Two domain protein, N-terminal domain has Ig-like fold, belongs to DUF4352 family (PF11611), C-terminal domain has fold: alpha(2)-beta(2)-alpha(2)-beta-alpha; domains connected by kinked-helix, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4R4G # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 58 ? MSE A 60 ? ASP A 86 MSE A 88 5 ? 3 HELX_P HELX_P2 2 ASP A 78 ? LYS A 82 ? ASP A 106 LYS A 110 5 ? 5 HELX_P HELX_P3 3 ASP A 119 ? SER A 124 ? ASP A 147 SER A 152 1 ? 6 HELX_P HELX_P4 4 ASP A 133 ? LYS A 142 ? ASP A 161 LYS A 170 1 ? 10 HELX_P HELX_P5 5 GLN A 144 ? LEU A 158 ? GLN A 172 LEU A 186 1 ? 15 HELX_P HELX_P6 6 ALA A 164 ? GLY A 171 ? ALA A 192 GLY A 199 1 ? 8 HELX_P HELX_P7 7 ASN A 173 ? SER A 193 ? ASN A 201 SER A 221 1 ? 21 HELX_P HELX_P8 8 SER A 196 ? ASP A 201 ? SER A 224 ASP A 229 5 ? 6 HELX_P HELX_P9 9 SER A 202 ? SER A 220 ? SER A 230 SER A 248 1 ? 19 HELX_P HELX_P10 10 SER A 247 ? SER A 261 ? SER A 275 SER A 289 1 ? 15 HELX_P HELX_P11 11 SER A 267 ? LYS A 284 ? SER A 295 LYS A 312 1 ? 18 HELX_P HELX_P12 12 ASP A 313 ? ALA A 322 ? ASP A 341 ALA A 350 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 59 C ? ? ? 1_555 A MSE 60 N ? ? A SER 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale2 covale both ? A MSE 60 C ? ? ? 1_555 A ASP 61 N ? ? A MSE 88 A ASP 89 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale3 covale both ? A LYS 70 C ? ? ? 1_555 A MSE 71 N ? ? A LYS 98 A MSE 99 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale4 covale both ? A MSE 71 C ? ? ? 1_555 A SER 72 N ? ? A MSE 99 A SER 100 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A LYS 298 C ? ? ? 1_555 A MSE 299 N ? ? A LYS 326 A MSE 327 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A MSE 299 C ? ? ? 1_555 A LYS 300 N ? ? A MSE 327 A LYS 328 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale7 covale both ? A ASP 310 C ? ? ? 1_555 A MSE 311 N ? ? A ASP 338 A MSE 339 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale8 covale both ? A MSE 311 C ? ? ? 1_555 A ASP 312 N ? ? A MSE 339 A ASP 340 1_555 ? ? ? ? ? ? ? 1.343 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 4 ? D ? 4 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 9 ? SER A 11 ? GLU A 37 SER A 39 A 2 GLN A 16 ? THR A 25 ? GLN A 44 THR A 53 A 3 LEU A 39 ? LYS A 48 ? LEU A 67 LYS A 76 A 4 SER A 93 ? VAL A 102 ? SER A 121 VAL A 130 B 1 LEU A 55 ? VAL A 57 ? LEU A 83 VAL A 85 B 2 SER A 86 ? ILE A 88 ? SER A 114 ILE A 116 C 1 THR A 69 ? MSE A 71 ? THR A 97 MSE A 99 C 2 PHE A 62 ? GLN A 66 ? PHE A 90 GLN A 94 C 3 GLN A 107 ? TYR A 112 ? GLN A 135 TYR A 140 C 4 VAL A 125 ? ASP A 130 ? VAL A 153 ASP A 158 D 1 SER A 221 ? SER A 230 ? SER A 249 SER A 258 D 2 GLU A 233 ? LYS A 241 ? GLU A 261 LYS A 269 D 3 LYS A 293 ? LYS A 301 ? LYS A 321 LYS A 329 D 4 TRP A 307 ? GLN A 308 ? TRP A 335 GLN A 336 E 1 VAL A 243 ? ASP A 244 ? VAL A 271 ASP A 272 E 2 ILE A 324 ? LYS A 325 ? ILE A 352 LYS A 353 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 10 ? N LYS A 38 O VAL A 17 ? O VAL A 45 A 2 3 N SER A 23 ? N SER A 51 O LYS A 42 ? O LYS A 70 A 3 4 N LEU A 41 ? N LEU A 69 O PHE A 100 ? O PHE A 128 B 1 2 N LEU A 55 ? N LEU A 83 O ILE A 88 ? O ILE A 116 C 1 2 O THR A 69 ? O THR A 97 N GLN A 66 ? N GLN A 94 C 2 3 N THR A 63 ? N THR A 91 O ASN A 111 ? O ASN A 139 C 3 4 N LEU A 110 ? N LEU A 138 O PHE A 127 ? O PHE A 155 D 1 2 N LYS A 225 ? N LYS A 253 O GLU A 237 ? O GLU A 265 D 2 3 N VAL A 240 ? N VAL A 268 O LYS A 293 ? O LYS A 321 D 3 4 N LYS A 300 ? N LYS A 328 O GLN A 308 ? O GLN A 336 E 1 2 N VAL A 243 ? N VAL A 271 O LYS A 325 ? O LYS A 353 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PG4 401 ? 5 'BINDING SITE FOR RESIDUE PG4 A 401' AC2 Software A PG4 402 ? 4 'BINDING SITE FOR RESIDUE PG4 A 402' AC3 Software A PG4 403 ? 3 'BINDING SITE FOR RESIDUE PG4 A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TYR A 65 ? TYR A 93 . ? 11_555 ? 2 AC1 5 GLU A 109 ? GLU A 137 . ? 11_555 ? 3 AC1 5 ASN A 111 ? ASN A 139 . ? 11_555 ? 4 AC1 5 ASN A 111 ? ASN A 139 . ? 1_555 ? 5 AC1 5 LYS A 121 ? LYS A 149 . ? 1_555 ? 6 AC2 4 LEU A 26 ? LEU A 54 . ? 1_555 ? 7 AC2 4 ASP A 36 ? ASP A 64 . ? 1_555 ? 8 AC2 4 LYS A 225 ? LYS A 253 . ? 1_555 ? 9 AC2 4 THR A 227 ? THR A 255 . ? 1_555 ? 10 AC3 3 ALA A 185 ? ALA A 213 . ? 1_555 ? 11 AC3 3 ILE A 212 ? ILE A 240 . ? 1_555 ? 12 AC3 3 VAL A 320 ? VAL A 348 . ? 1_555 ? # _atom_sites.entry_id 4R4G _atom_sites.fract_transf_matrix[1][1] 0.010137 _atom_sites.fract_transf_matrix[1][2] 0.005852 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011705 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005128 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 GLU 2 30 ? ? ? A . n A 1 3 LYS 3 31 ? ? ? A . n A 1 4 LYS 4 32 ? ? ? A . n A 1 5 GLU 5 33 33 GLU GLU A . n A 1 6 SER 6 34 34 SER SER A . n A 1 7 GLU 7 35 35 GLU GLU A . n A 1 8 THR 8 36 36 THR THR A . n A 1 9 GLU 9 37 37 GLU GLU A . n A 1 10 LYS 10 38 38 LYS LYS A . n A 1 11 SER 11 39 39 SER SER A . n A 1 12 SER 12 40 40 SER SER A . n A 1 13 ASP 13 41 41 ASP ASP A . n A 1 14 ILE 14 42 42 ILE ILE A . n A 1 15 ALA 15 43 43 ALA ALA A . n A 1 16 GLN 16 44 44 GLN GLN A . n A 1 17 VAL 17 45 45 VAL VAL A . n A 1 18 LYS 18 46 46 LYS LYS A . n A 1 19 ILE 19 47 47 ILE ILE A . n A 1 20 LYS 20 48 48 LYS LYS A . n A 1 21 ASP 21 49 49 ASP ASP A . n A 1 22 VAL 22 50 50 VAL VAL A . n A 1 23 SER 23 51 51 SER SER A . n A 1 24 TYR 24 52 52 TYR TYR A . n A 1 25 THR 25 53 53 THR THR A . n A 1 26 LEU 26 54 54 LEU LEU A . n A 1 27 PRO 27 55 55 PRO PRO A . n A 1 28 SER 28 56 56 SER SER A . n A 1 29 LYS 29 57 57 LYS LYS A . n A 1 30 TYR 30 58 58 TYR TYR A . n A 1 31 ASP 31 59 59 ASP ASP A . n A 1 32 LYS 32 60 60 LYS LYS A . n A 1 33 SER 33 61 61 SER SER A . n A 1 34 THR 34 62 62 THR THR A . n A 1 35 SER 35 63 63 SER SER A . n A 1 36 ASP 36 64 64 ASP ASP A . n A 1 37 ASP 37 65 65 ASP ASP A . n A 1 38 GLN 38 66 66 GLN GLN A . n A 1 39 LEU 39 67 67 LEU LEU A . n A 1 40 VAL 40 68 68 VAL VAL A . n A 1 41 LEU 41 69 69 LEU LEU A . n A 1 42 LYS 42 70 70 LYS LYS A . n A 1 43 VAL 43 71 71 VAL VAL A . n A 1 44 ASN 44 72 72 ASN ASN A . n A 1 45 VAL 45 73 73 VAL VAL A . n A 1 46 ALA 46 74 74 ALA ALA A . n A 1 47 VAL 47 75 75 VAL VAL A . n A 1 48 LYS 48 76 76 LYS LYS A . n A 1 49 ASN 49 77 77 ASN ASN A . n A 1 50 THR 50 78 78 THR THR A . n A 1 51 GLY 51 79 79 GLY GLY A . n A 1 52 LYS 52 80 80 LYS LYS A . n A 1 53 ASP 53 81 81 ASP ASP A . n A 1 54 PRO 54 82 82 PRO PRO A . n A 1 55 LEU 55 83 83 LEU LEU A . n A 1 56 ASN 56 84 84 ASN ASN A . n A 1 57 VAL 57 85 85 VAL VAL A . n A 1 58 ASP 58 86 86 ASP ASP A . n A 1 59 SER 59 87 87 SER SER A . n A 1 60 MSE 60 88 88 MSE MSE A . n A 1 61 ASP 61 89 89 ASP ASP A . n A 1 62 PHE 62 90 90 PHE PHE A . n A 1 63 THR 63 91 91 THR THR A . n A 1 64 LEU 64 92 92 LEU LEU A . n A 1 65 TYR 65 93 93 TYR TYR A . n A 1 66 GLN 66 94 94 GLN GLN A . n A 1 67 GLY 67 95 95 GLY GLY A . n A 1 68 ASP 68 96 96 ASP ASP A . n A 1 69 THR 69 97 97 THR THR A . n A 1 70 LYS 70 98 98 LYS LYS A . n A 1 71 MSE 71 99 99 MSE MSE A . n A 1 72 SER 72 100 100 SER SER A . n A 1 73 ASP 73 101 101 ASP ASP A . n A 1 74 THR 74 102 102 THR THR A . n A 1 75 ASP 75 103 103 ASP ASP A . n A 1 76 PRO 76 104 104 PRO PRO A . n A 1 77 GLU 77 105 105 GLU GLU A . n A 1 78 ASP 78 106 106 ASP ASP A . n A 1 79 TYR 79 107 107 TYR TYR A . n A 1 80 SER 80 108 108 SER SER A . n A 1 81 GLU 81 109 109 GLU GLU A . n A 1 82 LYS 82 110 110 LYS LYS A . n A 1 83 LEU 83 111 111 LEU LEU A . n A 1 84 GLN 84 112 112 GLN GLN A . n A 1 85 GLY 85 113 113 GLY GLY A . n A 1 86 SER 86 114 114 SER SER A . n A 1 87 THR 87 115 115 THR THR A . n A 1 88 ILE 88 116 116 ILE ILE A . n A 1 89 ASN 89 117 117 ASN ASN A . n A 1 90 ALA 90 118 118 ALA ALA A . n A 1 91 ASP 91 119 119 ASP ASP A . n A 1 92 LYS 92 120 120 LYS LYS A . n A 1 93 SER 93 121 121 SER SER A . n A 1 94 VAL 94 122 122 VAL VAL A . n A 1 95 GLU 95 123 123 GLU GLU A . n A 1 96 GLY 96 124 124 GLY GLY A . n A 1 97 ASN 97 125 125 ASN ASN A . n A 1 98 LEU 98 126 126 LEU LEU A . n A 1 99 PHE 99 127 127 PHE PHE A . n A 1 100 PHE 100 128 128 PHE PHE A . n A 1 101 VAL 101 129 129 VAL VAL A . n A 1 102 VAL 102 130 130 VAL VAL A . n A 1 103 ASP 103 131 131 ASP ASP A . n A 1 104 LYS 104 132 132 LYS LYS A . n A 1 105 GLY 105 133 133 GLY GLY A . n A 1 106 LYS 106 134 134 LYS LYS A . n A 1 107 GLN 107 135 135 GLN GLN A . n A 1 108 TYR 108 136 136 TYR TYR A . n A 1 109 GLU 109 137 137 GLU GLU A . n A 1 110 LEU 110 138 138 LEU LEU A . n A 1 111 ASN 111 139 139 ASN ASN A . n A 1 112 TYR 112 140 140 TYR TYR A . n A 1 113 THR 113 141 141 THR THR A . n A 1 114 PRO 114 142 142 PRO PRO A . n A 1 115 GLU 115 143 143 GLU GLU A . n A 1 116 SER 116 144 144 SER SER A . n A 1 117 TYR 117 145 145 TYR TYR A . n A 1 118 GLY 118 146 146 GLY GLY A . n A 1 119 ASP 119 147 147 ASP ASP A . n A 1 120 LYS 120 148 148 LYS LYS A . n A 1 121 LYS 121 149 149 LYS LYS A . n A 1 122 PRO 122 150 150 PRO PRO A . n A 1 123 LYS 123 151 151 LYS LYS A . n A 1 124 SER 124 152 152 SER SER A . n A 1 125 VAL 125 153 153 VAL VAL A . n A 1 126 THR 126 154 154 THR THR A . n A 1 127 PHE 127 155 155 PHE PHE A . n A 1 128 LYS 128 156 156 LYS LYS A . n A 1 129 ILE 129 157 157 ILE ILE A . n A 1 130 ASP 130 158 158 ASP ASP A . n A 1 131 GLY 131 159 159 GLY GLY A . n A 1 132 LYS 132 160 160 LYS LYS A . n A 1 133 ASP 133 161 161 ASP ASP A . n A 1 134 LYS 134 162 162 LYS LYS A . n A 1 135 LYS 135 163 163 LYS LYS A . n A 1 136 ILE 136 164 164 ILE ILE A . n A 1 137 LEU 137 165 165 LEU LEU A . n A 1 138 ALA 138 166 166 ALA ALA A . n A 1 139 THR 139 167 167 THR THR A . n A 1 140 ALA 140 168 168 ALA ALA A . n A 1 141 ASP 141 169 169 ASP ASP A . n A 1 142 LYS 142 170 170 LYS LYS A . n A 1 143 LEU 143 171 171 LEU LEU A . n A 1 144 GLN 144 172 172 GLN GLN A . n A 1 145 ASP 145 173 173 ASP ASP A . n A 1 146 SER 146 174 174 SER SER A . n A 1 147 ALA 147 175 175 ALA ALA A . n A 1 148 LYS 148 176 176 LYS LYS A . n A 1 149 ALA 149 177 177 ALA ALA A . n A 1 150 LEU 150 178 178 LEU LEU A . n A 1 151 SER 151 179 179 SER SER A . n A 1 152 ALA 152 180 180 ALA ALA A . n A 1 153 TYR 153 181 181 TYR TYR A . n A 1 154 VAL 154 182 182 VAL VAL A . n A 1 155 ASP 155 183 183 ASP ASP A . n A 1 156 VAL 156 184 184 VAL VAL A . n A 1 157 LEU 157 185 185 LEU LEU A . n A 1 158 LEU 158 186 186 LEU LEU A . n A 1 159 PHE 159 187 187 PHE PHE A . n A 1 160 GLY 160 188 188 GLY GLY A . n A 1 161 LYS 161 189 189 LYS LYS A . n A 1 162 ASP 162 190 190 ASP ASP A . n A 1 163 ASN 163 191 191 ASN ASN A . n A 1 164 ALA 164 192 192 ALA ALA A . n A 1 165 ASP 165 193 193 ASP ASP A . n A 1 166 PHE 166 194 194 PHE PHE A . n A 1 167 GLU 167 195 195 GLU GLU A . n A 1 168 LYS 168 196 196 LYS LYS A . n A 1 169 ILE 169 197 197 ILE ILE A . n A 1 170 THR 170 198 198 THR THR A . n A 1 171 GLY 171 199 199 GLY GLY A . n A 1 172 ALA 172 200 200 ALA ALA A . n A 1 173 ASN 173 201 201 ASN ASN A . n A 1 174 LYS 174 202 202 LYS LYS A . n A 1 175 ASN 175 203 203 ASN ASN A . n A 1 176 GLU 176 204 204 GLU GLU A . n A 1 177 ILE 177 205 205 ILE ILE A . n A 1 178 VAL 178 206 206 VAL VAL A . n A 1 179 ASN 179 207 207 ASN ASN A . n A 1 180 ASP 180 208 208 ASP ASP A . n A 1 181 PHE 181 209 209 PHE PHE A . n A 1 182 ASN 182 210 210 ASN ASN A . n A 1 183 GLU 183 211 211 GLU GLU A . n A 1 184 SER 184 212 212 SER SER A . n A 1 185 ALA 185 213 213 ALA ALA A . n A 1 186 LYS 186 214 214 LYS LYS A . n A 1 187 ASP 187 215 215 ASP ASP A . n A 1 188 GLY 188 216 216 GLY GLY A . n A 1 189 TYR 189 217 217 TYR TYR A . n A 1 190 LEU 190 218 218 LEU LEU A . n A 1 191 SER 191 219 219 SER SER A . n A 1 192 ALA 192 220 220 ALA ALA A . n A 1 193 SER 193 221 221 SER SER A . n A 1 194 GLY 194 222 222 GLY GLY A . n A 1 195 LEU 195 223 223 LEU LEU A . n A 1 196 SER 196 224 224 SER SER A . n A 1 197 SER 197 225 225 SER SER A . n A 1 198 THR 198 226 226 THR THR A . n A 1 199 TYR 199 227 227 TYR TYR A . n A 1 200 ALA 200 228 228 ALA ALA A . n A 1 201 ASP 201 229 229 ASP ASP A . n A 1 202 SER 202 230 230 SER SER A . n A 1 203 LYS 203 231 231 LYS LYS A . n A 1 204 ALA 204 232 232 ALA ALA A . n A 1 205 LEU 205 233 233 LEU LEU A . n A 1 206 ASP 206 234 234 ASP ASP A . n A 1 207 ASN 207 235 235 ASN ASN A . n A 1 208 ILE 208 236 236 ILE ILE A . n A 1 209 VAL 209 237 237 VAL VAL A . n A 1 210 ASN 210 238 238 ASN ASN A . n A 1 211 GLY 211 239 239 GLY GLY A . n A 1 212 ILE 212 240 240 ILE ILE A . n A 1 213 LYS 213 241 241 LYS LYS A . n A 1 214 GLU 214 242 242 GLU GLU A . n A 1 215 GLY 215 243 243 GLY GLY A . n A 1 216 LEU 216 244 244 LEU LEU A . n A 1 217 SER 217 245 245 SER SER A . n A 1 218 LYS 218 246 246 LYS LYS A . n A 1 219 ASN 219 247 247 ASN ASN A . n A 1 220 SER 220 248 248 SER SER A . n A 1 221 SER 221 249 249 SER SER A . n A 1 222 ILE 222 250 250 ILE ILE A . n A 1 223 GLN 223 251 251 GLN GLN A . n A 1 224 ALA 224 252 252 ALA ALA A . n A 1 225 LYS 225 253 253 LYS LYS A . n A 1 226 THR 226 254 254 THR THR A . n A 1 227 THR 227 255 255 THR THR A . n A 1 228 SER 228 256 256 SER SER A . n A 1 229 ILE 229 257 257 ILE ILE A . n A 1 230 SER 230 258 258 SER SER A . n A 1 231 LYS 231 259 259 LYS LYS A . n A 1 232 ASP 232 260 260 ASP ASP A . n A 1 233 GLU 233 261 261 GLU GLU A . n A 1 234 ALA 234 262 262 ALA ALA A . n A 1 235 ILE 235 263 263 ILE ILE A . n A 1 236 VAL 236 264 264 VAL VAL A . n A 1 237 GLU 237 265 265 GLU GLU A . n A 1 238 ALA 238 266 266 ALA ALA A . n A 1 239 THR 239 267 267 THR THR A . n A 1 240 VAL 240 268 268 VAL VAL A . n A 1 241 LYS 241 269 269 LYS LYS A . n A 1 242 PRO 242 270 270 PRO PRO A . n A 1 243 VAL 243 271 271 VAL VAL A . n A 1 244 ASP 244 272 272 ASP ASP A . n A 1 245 ALA 245 273 273 ALA ALA A . n A 1 246 SER 246 274 274 SER SER A . n A 1 247 SER 247 275 275 SER SER A . n A 1 248 LEU 248 276 276 LEU LEU A . n A 1 249 SER 249 277 277 SER SER A . n A 1 250 ASP 250 278 278 ASP ASP A . n A 1 251 ARG 251 279 279 ARG ARG A . n A 1 252 ILE 252 280 280 ILE ILE A . n A 1 253 GLU 253 281 281 GLU GLU A . n A 1 254 ASP 254 282 282 ASP ASP A . n A 1 255 LYS 255 283 283 LYS LYS A . n A 1 256 VAL 256 284 284 VAL VAL A . n A 1 257 LYS 257 285 285 LYS LYS A . n A 1 258 ASP 258 286 286 ASP ASP A . n A 1 259 TYR 259 287 287 TYR TYR A . n A 1 260 TYR 260 288 288 TYR TYR A . n A 1 261 SER 261 289 289 SER SER A . n A 1 262 LYS 262 290 290 LYS LYS A . n A 1 263 ASN 263 291 291 ASN ASN A . n A 1 264 SER 264 292 292 SER SER A . n A 1 265 SER 265 293 293 SER SER A . n A 1 266 ALA 266 294 294 ALA ALA A . n A 1 267 SER 267 295 295 SER SER A . n A 1 268 TYR 268 296 296 TYR TYR A . n A 1 269 GLU 269 297 297 GLU GLU A . n A 1 270 GLU 270 298 298 GLU GLU A . n A 1 271 ALA 271 299 299 ALA ALA A . n A 1 272 VAL 272 300 300 VAL VAL A . n A 1 273 LYS 273 301 301 LYS LYS A . n A 1 274 TYR 274 302 302 TYR TYR A . n A 1 275 ALA 275 303 303 ALA ALA A . n A 1 276 LEU 276 304 304 LEU LEU A . n A 1 277 GLN 277 305 305 GLN GLN A . n A 1 278 VAL 278 306 306 VAL VAL A . n A 1 279 TYR 279 307 307 TYR TYR A . n A 1 280 PRO 280 308 308 PRO PRO A . n A 1 281 GLU 281 309 309 GLU GLU A . n A 1 282 GLU 282 310 310 GLU GLU A . n A 1 283 PHE 283 311 311 PHE PHE A . n A 1 284 LYS 284 312 312 LYS LYS A . n A 1 285 LYS 285 313 313 LYS LYS A . n A 1 286 LEU 286 314 314 LEU LEU A . n A 1 287 GLY 287 315 315 GLY GLY A . n A 1 288 PRO 288 316 316 PRO PRO A . n A 1 289 ALA 289 317 317 ALA ALA A . n A 1 290 SER 290 318 318 SER SER A . n A 1 291 SER 291 319 319 SER SER A . n A 1 292 GLU 292 320 320 GLU GLU A . n A 1 293 LYS 293 321 321 LYS LYS A . n A 1 294 THR 294 322 322 THR THR A . n A 1 295 VAL 295 323 323 VAL VAL A . n A 1 296 GLU 296 324 324 GLU GLU A . n A 1 297 VAL 297 325 325 VAL VAL A . n A 1 298 LYS 298 326 326 LYS LYS A . n A 1 299 MSE 299 327 327 MSE MSE A . n A 1 300 LYS 300 328 328 LYS LYS A . n A 1 301 LYS 301 329 329 LYS LYS A . n A 1 302 ASN 302 330 330 ASN ASN A . n A 1 303 ASP 303 331 331 ASP ASP A . n A 1 304 ILE 304 332 332 ILE ILE A . n A 1 305 ASP 305 333 333 ASP ASP A . n A 1 306 GLN 306 334 334 GLN GLN A . n A 1 307 TRP 307 335 335 TRP TRP A . n A 1 308 GLN 308 336 336 GLN GLN A . n A 1 309 LEU 309 337 337 LEU LEU A . n A 1 310 ASP 310 338 338 ASP ASP A . n A 1 311 MSE 311 339 339 MSE MSE A . n A 1 312 ASP 312 340 340 ASP ASP A . n A 1 313 ASP 313 341 341 ASP ASP A . n A 1 314 TYR 314 342 342 TYR TYR A . n A 1 315 ARG 315 343 343 ARG ARG A . n A 1 316 ALA 316 344 344 ALA ALA A . n A 1 317 ALA 317 345 345 ALA ALA A . n A 1 318 GLU 318 346 346 GLU GLU A . n A 1 319 LEU 319 347 347 LEU LEU A . n A 1 320 VAL 320 348 348 VAL VAL A . n A 1 321 GLU 321 349 349 GLU GLU A . n A 1 322 ALA 322 350 350 ALA ALA A . n A 1 323 PHE 323 351 351 PHE PHE A . n A 1 324 ILE 324 352 352 ILE ILE A . n A 1 325 LYS 325 353 353 LYS LYS A . n A 1 326 GLU 326 354 354 GLU GLU A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 1 401 401 PG4 PG4 A . C 2 PG4 1 402 402 PG4 PG4 A . D 2 PG4 1 403 403 PG4 PG4 A . E 3 HOH 1 501 404 HOH HOH A . E 3 HOH 2 502 405 HOH HOH A . E 3 HOH 3 503 406 HOH HOH A . E 3 HOH 4 504 407 HOH HOH A . E 3 HOH 5 505 408 HOH HOH A . E 3 HOH 6 506 409 HOH HOH A . E 3 HOH 7 507 410 HOH HOH A . E 3 HOH 8 508 411 HOH HOH A . E 3 HOH 9 509 412 HOH HOH A . E 3 HOH 10 510 413 HOH HOH A . E 3 HOH 11 511 414 HOH HOH A . E 3 HOH 12 512 415 HOH HOH A . E 3 HOH 13 513 416 HOH HOH A . E 3 HOH 14 514 417 HOH HOH A . E 3 HOH 15 515 418 HOH HOH A . E 3 HOH 16 516 419 HOH HOH A . E 3 HOH 17 517 420 HOH HOH A . E 3 HOH 18 518 421 HOH HOH A . E 3 HOH 19 519 422 HOH HOH A . E 3 HOH 20 520 423 HOH HOH A . E 3 HOH 21 521 424 HOH HOH A . E 3 HOH 22 522 425 HOH HOH A . E 3 HOH 23 523 426 HOH HOH A . E 3 HOH 24 524 427 HOH HOH A . E 3 HOH 25 525 428 HOH HOH A . E 3 HOH 26 526 429 HOH HOH A . E 3 HOH 27 527 430 HOH HOH A . E 3 HOH 28 528 431 HOH HOH A . E 3 HOH 29 529 432 HOH HOH A . E 3 HOH 30 530 433 HOH HOH A . E 3 HOH 31 531 434 HOH HOH A . E 3 HOH 32 532 435 HOH HOH A . E 3 HOH 33 533 436 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 60 A MSE 88 ? MET SELENOMETHIONINE 2 A MSE 71 A MSE 99 ? MET SELENOMETHIONINE 3 A MSE 299 A MSE 327 ? MET SELENOMETHIONINE 4 A MSE 311 A MSE 339 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 1.5638 _pdbx_refine_tls.origin_y 39.7534 _pdbx_refine_tls.origin_z 86.9264 _pdbx_refine_tls.T[1][1] -0.1615 _pdbx_refine_tls.T[2][2] 0.0414 _pdbx_refine_tls.T[3][3] -0.1197 _pdbx_refine_tls.T[1][2] 0.0897 _pdbx_refine_tls.T[1][3] -0.1061 _pdbx_refine_tls.T[2][3] -0.0160 _pdbx_refine_tls.L[1][1] 0.6088 _pdbx_refine_tls.L[2][2] 0.5434 _pdbx_refine_tls.L[3][3] 8.3155 _pdbx_refine_tls.L[1][2] -0.0593 _pdbx_refine_tls.L[1][3] 2.0175 _pdbx_refine_tls.L[2][3] 0.7999 _pdbx_refine_tls.S[1][1] -0.2117 _pdbx_refine_tls.S[2][2] 0.1074 _pdbx_refine_tls.S[3][3] 0.1043 _pdbx_refine_tls.S[1][2] -0.0877 _pdbx_refine_tls.S[1][3] 0.0287 _pdbx_refine_tls.S[2][3] 0.0081 _pdbx_refine_tls.S[2][1] 0.1853 _pdbx_refine_tls.S[3][1] -0.4138 _pdbx_refine_tls.S[3][2] -0.3718 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 33 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 354 _pdbx_refine_tls_group.selection_details '{A|33 - 354}' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'January 10, 2014 BUILT=20140307' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4R4G _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (30-354) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 80 ? ? -100.93 -63.63 2 1 ASN A 191 ? ? -166.13 93.69 3 1 TYR A 227 ? ? -53.86 -9.70 4 1 ASP A 229 ? ? -111.59 71.39 5 1 LYS A 259 ? ? 65.70 -114.23 6 1 LYS A 290 ? ? -84.49 -75.00 7 1 SER A 293 ? ? -76.48 37.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 80 ? CG ? A LYS 52 CG 2 1 Y 1 A LYS 80 ? CD ? A LYS 52 CD 3 1 Y 1 A LYS 80 ? CE ? A LYS 52 CE 4 1 Y 1 A LYS 80 ? NZ ? A LYS 52 NZ 5 1 Y 1 A TYR 145 ? CG ? A TYR 117 CG 6 1 Y 1 A TYR 145 ? CD1 ? A TYR 117 CD1 7 1 Y 1 A TYR 145 ? CD2 ? A TYR 117 CD2 8 1 Y 1 A TYR 145 ? CE1 ? A TYR 117 CE1 9 1 Y 1 A TYR 145 ? CE2 ? A TYR 117 CE2 10 1 Y 1 A TYR 145 ? CZ ? A TYR 117 CZ 11 1 Y 1 A TYR 145 ? OH ? A TYR 117 OH 12 1 Y 1 A SER 224 ? OG ? A SER 196 OG 13 1 Y 1 A SER 225 ? OG ? A SER 197 OG 14 1 Y 1 A TYR 342 ? CG ? A TYR 314 CG 15 1 Y 1 A TYR 342 ? CD1 ? A TYR 314 CD1 16 1 Y 1 A TYR 342 ? CD2 ? A TYR 314 CD2 17 1 Y 1 A TYR 342 ? CE1 ? A TYR 314 CE1 18 1 Y 1 A TYR 342 ? CE2 ? A TYR 314 CE2 19 1 Y 1 A TYR 342 ? CZ ? A TYR 314 CZ 20 1 Y 1 A TYR 342 ? OH ? A TYR 314 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLU 30 ? A GLU 2 3 1 Y 1 A LYS 31 ? A LYS 3 4 1 Y 1 A LYS 32 ? A LYS 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'TETRAETHYLENE GLYCOL' PG4 3 water HOH #