data_4RQ3 # _entry.id 4RQ3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RQ3 pdb_00004rq3 10.2210/pdb4rq3/pdb NDB NA3286 ? ? RCSB RCSB087656 ? ? WWPDB D_1000087656 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 4RPX PDB . unspecified 4RPY PDB . unspecified 4RPZ PDB . unspecified 4RQ0 PDB . unspecified 4RQ1 PDB . unspecified 4RQ2 PDB . unspecified 4RQ4 PDB . unspecified 4RQ5 PDB . unspecified 4RQ6 PDB . unspecified 4RQ7 PDB . unspecified 4RQ8 PDB . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RQ3 _pdbx_database_status.recvd_initial_deposition_date 2014-10-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vyas, R.' 1 'Suo, Z.' 2 # _citation.id primary _citation.title 'Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 137 _citation.page_first 5225 _citation.page_last 5230 _citation.year 2015 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25825995 _citation.pdbx_database_id_DOI 10.1021/jacs.5b02109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vyas, R.' 1 ? primary 'Reed, A.J.' 2 ? primary 'Tokarsky, E.J.' 3 ? primary 'Suo, Z.' 4 ? # _cell.entry_id 4RQ3 _cell.length_a 49.320 _cell.length_b 79.680 _cell.length_c 55.450 _cell.angle_alpha 90.00 _cell.angle_beta 106.51 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RQ3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39258.785 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') ; 3061.004 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4885.157 1 ? ? ? ? 5 non-polymer syn ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; 491.182 1 ? ? ? ? 6 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 8 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 9 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 10 water nat water 18.015 242 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 '5-mer phosphorylated Downstream Primer' 3 '10-mer Primer' 4 '16-mer Template' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ? 4 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGCATCAGC T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 MET n 1 4 SER n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 ALA n 1 9 PRO n 1 10 GLN n 1 11 GLU n 1 12 THR n 1 13 LEU n 1 14 ASN n 1 15 GLY n 1 16 GLY n 1 17 ILE n 1 18 THR n 1 19 ASP n 1 20 MET n 1 21 LEU n 1 22 THR n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 ASN n 1 27 PHE n 1 28 GLU n 1 29 LYS n 1 30 ASN n 1 31 VAL n 1 32 SER n 1 33 GLN n 1 34 ALA n 1 35 ILE n 1 36 HIS n 1 37 LYS n 1 38 TYR n 1 39 ASN n 1 40 ALA n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 ALA n 1 45 ALA n 1 46 SER n 1 47 VAL n 1 48 ILE n 1 49 ALA n 1 50 LYS n 1 51 TYR n 1 52 PRO n 1 53 HIS n 1 54 LYS n 1 55 ILE n 1 56 LYS n 1 57 SER n 1 58 GLY n 1 59 ALA n 1 60 GLU n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 LEU n 1 65 PRO n 1 66 GLY n 1 67 VAL n 1 68 GLY n 1 69 THR n 1 70 LYS n 1 71 ILE n 1 72 ALA n 1 73 GLU n 1 74 LYS n 1 75 ILE n 1 76 ASP n 1 77 GLU n 1 78 PHE n 1 79 LEU n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 LYS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 LEU n 1 88 GLU n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 GLN n 1 93 ASP n 1 94 ASP n 1 95 THR n 1 96 SER n 1 97 SER n 1 98 SER n 1 99 ILE n 1 100 ASN n 1 101 PHE n 1 102 LEU n 1 103 THR n 1 104 ARG n 1 105 VAL n 1 106 SER n 1 107 GLY n 1 108 ILE n 1 109 GLY n 1 110 PRO n 1 111 SER n 1 112 ALA n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 PHE n 1 117 VAL n 1 118 ASP n 1 119 GLU n 1 120 GLY n 1 121 ILE n 1 122 LYS n 1 123 THR n 1 124 LEU n 1 125 GLU n 1 126 ASP n 1 127 LEU n 1 128 ARG n 1 129 LYS n 1 130 ASN n 1 131 GLU n 1 132 ASP n 1 133 LYS n 1 134 LEU n 1 135 ASN n 1 136 HIS n 1 137 HIS n 1 138 GLN n 1 139 ARG n 1 140 ILE n 1 141 GLY n 1 142 LEU n 1 143 LYS n 1 144 TYR n 1 145 PHE n 1 146 GLY n 1 147 ASP n 1 148 PHE n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 ILE n 1 153 PRO n 1 154 ARG n 1 155 GLU n 1 156 GLU n 1 157 MET n 1 158 LEU n 1 159 GLN n 1 160 MET n 1 161 GLN n 1 162 ASP n 1 163 ILE n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 GLU n 1 168 VAL n 1 169 LYS n 1 170 LYS n 1 171 VAL n 1 172 ASP n 1 173 SER n 1 174 GLU n 1 175 TYR n 1 176 ILE n 1 177 ALA n 1 178 THR n 1 179 VAL n 1 180 CYS n 1 181 GLY n 1 182 SER n 1 183 PHE n 1 184 ARG n 1 185 ARG n 1 186 GLY n 1 187 ALA n 1 188 GLU n 1 189 SER n 1 190 SER n 1 191 GLY n 1 192 ASP n 1 193 MET n 1 194 ASP n 1 195 VAL n 1 196 LEU n 1 197 LEU n 1 198 THR n 1 199 HIS n 1 200 PRO n 1 201 SER n 1 202 PHE n 1 203 THR n 1 204 SER n 1 205 GLU n 1 206 SER n 1 207 THR n 1 208 LYS n 1 209 GLN n 1 210 PRO n 1 211 LYS n 1 212 LEU n 1 213 LEU n 1 214 HIS n 1 215 GLN n 1 216 VAL n 1 217 VAL n 1 218 GLU n 1 219 GLN n 1 220 LEU n 1 221 GLN n 1 222 LYS n 1 223 VAL n 1 224 HIS n 1 225 PHE n 1 226 ILE n 1 227 THR n 1 228 ASP n 1 229 THR n 1 230 LEU n 1 231 SER n 1 232 LYS n 1 233 GLY n 1 234 GLU n 1 235 THR n 1 236 LYS n 1 237 PHE n 1 238 MET n 1 239 GLY n 1 240 VAL n 1 241 CYS n 1 242 GLN n 1 243 LEU n 1 244 PRO n 1 245 SER n 1 246 LYS n 1 247 ASN n 1 248 ASP n 1 249 GLU n 1 250 LYS n 1 251 GLU n 1 252 TYR n 1 253 PRO n 1 254 HIS n 1 255 ARG n 1 256 ARG n 1 257 ILE n 1 258 ASP n 1 259 ILE n 1 260 ARG n 1 261 LEU n 1 262 ILE n 1 263 PRO n 1 264 LYS n 1 265 ASP n 1 266 GLN n 1 267 TYR n 1 268 TYR n 1 269 CYS n 1 270 GLY n 1 271 VAL n 1 272 LEU n 1 273 TYR n 1 274 PHE n 1 275 THR n 1 276 GLY n 1 277 SER n 1 278 ASP n 1 279 ILE n 1 280 PHE n 1 281 ASN n 1 282 LYS n 1 283 ASN n 1 284 MET n 1 285 ARG n 1 286 ALA n 1 287 HIS n 1 288 ALA n 1 289 LEU n 1 290 GLU n 1 291 LYS n 1 292 GLY n 1 293 PHE n 1 294 THR n 1 295 ILE n 1 296 ASN n 1 297 GLU n 1 298 TYR n 1 299 THR n 1 300 ILE n 1 301 ARG n 1 302 PRO n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 GLY n 1 308 VAL n 1 309 ALA n 1 310 GLY n 1 311 GLU n 1 312 PRO n 1 313 LEU n 1 314 PRO n 1 315 VAL n 1 316 ASP n 1 317 SER n 1 318 GLU n 1 319 LYS n 1 320 ASP n 1 321 ILE n 1 322 PHE n 1 323 ASP n 1 324 TYR n 1 325 ILE n 1 326 GLN n 1 327 TRP n 1 328 LYS n 1 329 TYR n 1 330 ARG n 1 331 GLU n 1 332 PRO n 1 333 LYS n 1 334 ASP n 1 335 ARG n 1 336 SER n 1 337 GLU n 1 338 HIS n 1 339 HIS n 1 340 HIS n 1 341 HIS n 1 342 HIS n 1 343 HIS n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 8OG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POL B, POLB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4RQ3 4RQ3 2 ? ? ? 3 PDB 4RQ3 4RQ3 3 ? ? ? 4 PDB 4RQ3 4RQ3 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RQ3 A 3 ? 337 ? P06746 1 ? 335 ? 1 335 2 2 4RQ3 D 1 ? 5 ? 4RQ3 1 ? 5 ? 1 5 3 3 4RQ3 P 1 ? 10 ? 4RQ3 1 ? 10 ? 1 10 4 4 4RQ3 T 1 ? 16 ? 4RQ3 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RQ3 MET A 1 ? UNP P06746 ? ? 'expression tag' -1 1 1 4RQ3 GLY A 2 ? UNP P06746 ? ? 'expression tag' 0 2 1 4RQ3 HIS A 338 ? UNP P06746 ? ? 'expression tag' 336 3 1 4RQ3 HIS A 339 ? UNP P06746 ? ? 'expression tag' 337 4 1 4RQ3 HIS A 340 ? UNP P06746 ? ? 'expression tag' 338 5 1 4RQ3 HIS A 341 ? UNP P06746 ? ? 'expression tag' 339 6 1 4RQ3 HIS A 342 ? UNP P06746 ? ? 'expression tag' 340 7 1 4RQ3 HIS A 343 ? UNP P06746 ? ? 'expression tag' 341 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DTP non-polymer . ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; ? 'C10 H16 N5 O12 P3' 491.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4RQ3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '50 MM IMIDAZOLE, 350 MM SODIUM Acetate, 17% PEG3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 193 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2014-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 4RQ3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 53.16 _reflns.d_resolution_high 2.00 _reflns.number_obs 26643 _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.number_all ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs 0.472 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 6615 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RQ3 _refine.ls_number_reflns_obs 25340 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.29 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 95.61 _refine.ls_R_factor_obs 0.19410 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19150 _refine.ls_R_factor_R_free 0.24551 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1302 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.B_iso_mean 27.921 _refine.aniso_B[1][1] -0.07 _refine.aniso_B[2][2] 0.14 _refine.aniso_B[3][3] -0.07 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 4KLD' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.224 _refine.pdbx_overall_ESU_R_Free 0.190 _refine.overall_SU_ML 0.144 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.395 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2613 _refine_hist.pdbx_number_atoms_nucleic_acid 633 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 242 _refine_hist.number_atoms_total 3540 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 47.29 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.018 ? 3439 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 2983 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.282 1.814 ? 4774 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.871 3.000 ? 6921 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.416 5.000 ? 335 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 35.271 24.331 ? 127 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.791 15.000 ? 517 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 12.545 15.000 ? 18 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.066 0.200 ? 493 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 3420 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 771 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.371 2.528 ? 1316 ? 'X-RAY DIFFRACTION' r_mcbond_other 1.371 2.520 ? 1312 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.311 3.774 ? 1642 ? 'X-RAY DIFFRACTION' r_mcangle_other 2.310 3.776 ? 1643 ? 'X-RAY DIFFRACTION' r_scbond_it 1.764 2.984 ? 2123 ? 'X-RAY DIFFRACTION' r_scbond_other 1.764 2.984 ? 2122 ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other 2.926 4.429 ? 3127 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 5.048 23.411 ? 4303 ? 'X-RAY DIFFRACTION' r_long_range_B_other 4.953 23.300 ? 4240 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1862 _refine_ls_shell.R_factor_R_work 0.278 _refine_ls_shell.percent_reflns_obs 94.95 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4RQ3 _struct.title ;Precatalytic ternary complex of Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG) and dATP in the presence of CaCl2 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RQ3 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'X-family, pol beta, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 8 ? M N N 8 ? N N N 8 ? O N N 8 ? P N N 9 ? Q N N 9 ? R N N 9 ? S N N 10 ? T N N 10 ? U N N 10 ? V N N 10 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? VAL A 31 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 34 ? TYR A 51 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 57 ? LYS A 63 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 68 ? GLY A 82 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 84 ? GLN A 92 ? LEU A 82 GLN A 90 1 ? 9 HELX_P HELX_P6 6 ASP A 93 ? ARG A 104 ? ASP A 91 ARG A 102 1 ? 12 HELX_P HELX_P7 7 GLY A 109 ? GLU A 119 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 123 ? LYS A 129 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 9 ASN A 130 ? LEU A 134 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 10 ASN A 135 ? TYR A 144 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 144 ? LYS A 150 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG A 154 ? ASP A 172 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 180 ? ARG A 185 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS A 211 ? VAL A 223 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 263 ? ASP A 265 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 266 ? GLY A 276 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 277 ? LYS A 291 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER A 317 ? ILE A 325 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 331 ? SER A 336 ? GLU A 329 SER A 334 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DC 5 "O3'" ? ? ? 1_555 D 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale2 covale both ? D 8OG 6 "O3'" ? ? ? 1_555 D DG 7 P ? ? T 8OG 6 T DG 7 1_555 ? ? ? ? ? ? ? 1.614 ? ? metalc1 metalc ? ? A LYS 62 O ? ? ? 1_555 J NA . NA ? ? A LYS 60 A NA 406 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc2 metalc ? ? A LEU 64 O ? ? ? 1_555 J NA . NA ? ? A LEU 62 A NA 406 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc3 metalc ? ? A VAL 67 O ? ? ? 1_555 J NA . NA ? ? A VAL 65 A NA 406 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc4 metalc ? ? A THR 103 O ? ? ? 1_555 I NA . NA ? ? A THR 101 A NA 405 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc5 metalc ? ? A VAL 105 O ? ? ? 1_555 I NA . NA ? ? A VAL 103 A NA 405 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc6 metalc ? ? A ILE 108 O ? ? ? 1_555 I NA . NA ? ? A ILE 106 A NA 405 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc7 metalc ? ? A ASP 162 OD1 ? ? ? 1_555 K NA . NA ? ? A ASP 160 A NA 407 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc8 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 190 A CA 402 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc9 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 190 A CA 402 1_555 ? ? ? ? ? ? ? 3.058 ? ? metalc10 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 G CA . CA ? ? A ASP 190 A CA 403 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc11 metalc ? ? A ASP 194 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 192 A CA 402 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc12 metalc ? ? A ASP 194 OD2 ? ? ? 1_555 G CA . CA ? ? A ASP 192 A CA 403 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc13 metalc ? ? A ASP 258 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 256 A CA 402 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc14 metalc ? ? E DTP . O2A ? ? ? 1_555 F CA . CA ? ? A DTP 401 A CA 402 1_555 ? ? ? ? ? ? ? 2.485 ? ? metalc15 metalc ? ? E DTP . O2G ? ? ? 1_555 G CA . CA ? ? A DTP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc16 metalc ? ? E DTP . O2B ? ? ? 1_555 G CA . CA ? ? A DTP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc17 metalc ? ? E DTP . O2A ? ? ? 1_555 G CA . CA ? ? A DTP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.245 ? ? metalc18 metalc ? ? F CA . CA ? ? ? 1_555 C DC 10 "O3'" ? ? A CA 402 P DC 10 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc19 metalc ? ? F CA . CA ? ? ? 1_555 U HOH . O ? ? A CA 402 P HOH 101 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc20 metalc ? ? G CA . CA ? ? ? 1_555 S HOH . O ? ? A CA 403 A HOH 501 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc21 metalc ? ? H NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 404 A HOH 677 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc22 metalc ? ? H NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 404 A HOH 678 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc23 metalc ? ? H NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 404 A HOH 679 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc24 metalc ? ? I NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 405 A HOH 504 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc25 metalc ? ? I NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 405 P DG 9 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc26 metalc ? ? I NA . NA ? ? ? 1_555 U HOH . O ? ? A NA 405 P HOH 102 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc27 metalc ? ? J NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 406 A HOH 522 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc28 metalc ? ? J NA . NA ? ? ? 1_555 B DC 3 OP1 ? ? A NA 406 D DC 3 1_555 ? ? ? ? ? ? ? 2.822 ? ? metalc29 metalc ? ? K NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 407 A HOH 610 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc30 metalc ? ? K NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 407 A HOH 652 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc31 metalc ? ? K NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 407 A HOH 681 1_555 ? ? ? ? ? ? ? 2.251 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 276 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 277 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 152 ? PRO A 153 ? ILE A 150 PRO A 151 A 2 SER A 189 ? SER A 190 ? SER A 187 SER A 188 B 1 ILE A 176 ? VAL A 179 ? ILE A 174 VAL A 177 B 2 MET A 193 ? THR A 198 ? MET A 191 THR A 196 B 3 ARG A 255 ? LEU A 261 ? ARG A 253 LEU A 259 B 4 LYS A 236 ? CYS A 241 ? LYS A 234 CYS A 239 B 5 ILE A 226 ? LYS A 232 ? ILE A 224 LYS A 230 C 1 PHE A 202 ? THR A 203 ? PHE A 200 THR A 201 C 2 SER A 206 ? THR A 207 ? SER A 204 THR A 205 D 1 PHE A 293 ? ILE A 295 ? PHE A 291 ILE A 293 D 2 ILE A 300 ? PRO A 302 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 152 ? N ILE A 150 O SER A 190 ? O SER A 188 B 1 2 N THR A 178 ? N THR A 176 O LEU A 196 ? O LEU A 194 B 2 3 N LEU A 197 ? N LEU A 195 O ARG A 260 ? O ARG A 258 B 3 4 O ARG A 255 ? O ARG A 253 N CYS A 241 ? N CYS A 239 B 4 5 O MET A 238 ? O MET A 236 N SER A 231 ? N SER A 229 C 1 2 N THR A 203 ? N THR A 201 O SER A 206 ? O SER A 204 D 1 2 N THR A 294 ? N THR A 292 O ARG A 301 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DTP 401 ? 22 'BINDING SITE FOR RESIDUE DTP A 401' AC2 Software A CA 402 ? 6 'BINDING SITE FOR RESIDUE CA A 402' AC3 Software A CA 403 ? 4 'BINDING SITE FOR RESIDUE CA A 403' AC4 Software A NA 404 ? 3 'BINDING SITE FOR RESIDUE NA A 404' AC5 Software A NA 405 ? 6 'BINDING SITE FOR RESIDUE NA A 405' AC6 Software A NA 406 ? 5 'BINDING SITE FOR RESIDUE NA A 406' AC7 Software A NA 407 ? 4 'BINDING SITE FOR RESIDUE NA A 407' AC8 Software A CL 408 ? 4 'BINDING SITE FOR RESIDUE CL A 408' AC9 Software A CL 409 ? 3 'BINDING SITE FOR RESIDUE CL A 409' BC1 Software A CL 410 ? 4 'BINDING SITE FOR RESIDUE CL A 410' BC2 Software A CL 411 ? 3 'BINDING SITE FOR RESIDUE CL A 411' BC3 Software A ACT 412 ? 2 'BINDING SITE FOR RESIDUE ACT A 412' BC4 Software A ACT 413 ? 6 'BINDING SITE FOR RESIDUE ACT A 413' BC5 Software A ACT 414 ? 2 'BINDING SITE FOR RESIDUE ACT A 414' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 ARG A 151 ? ARG A 149 . ? 1_555 ? 2 AC1 22 GLY A 181 ? GLY A 179 . ? 1_555 ? 3 AC1 22 SER A 182 ? SER A 180 . ? 1_555 ? 4 AC1 22 ARG A 185 ? ARG A 183 . ? 1_555 ? 5 AC1 22 SER A 190 ? SER A 188 . ? 1_555 ? 6 AC1 22 GLY A 191 ? GLY A 189 . ? 1_555 ? 7 AC1 22 ASP A 192 ? ASP A 190 . ? 1_555 ? 8 AC1 22 ASP A 194 ? ASP A 192 . ? 1_555 ? 9 AC1 22 TYR A 273 ? TYR A 271 . ? 1_555 ? 10 AC1 22 PHE A 274 ? PHE A 272 . ? 1_555 ? 11 AC1 22 GLY A 276 ? GLY A 274 . ? 1_555 ? 12 AC1 22 ASP A 278 ? ASP A 276 . ? 1_555 ? 13 AC1 22 ASN A 281 ? ASN A 279 . ? 1_555 ? 14 AC1 22 CA F . ? CA A 402 . ? 1_555 ? 15 AC1 22 CA G . ? CA A 403 . ? 1_555 ? 16 AC1 22 HOH S . ? HOH A 501 . ? 1_555 ? 17 AC1 22 HOH S . ? HOH A 503 . ? 1_555 ? 18 AC1 22 HOH S . ? HOH A 556 . ? 1_555 ? 19 AC1 22 DC C 10 ? DC P 10 . ? 1_555 ? 20 AC1 22 HOH U . ? HOH P 101 . ? 1_555 ? 21 AC1 22 8OG D 6 ? 8OG T 6 . ? 1_555 ? 22 AC1 22 DG D 7 ? DG T 7 . ? 1_555 ? 23 AC2 6 ASP A 192 ? ASP A 190 . ? 1_555 ? 24 AC2 6 ASP A 194 ? ASP A 192 . ? 1_555 ? 25 AC2 6 ASP A 258 ? ASP A 256 . ? 1_555 ? 26 AC2 6 DTP E . ? DTP A 401 . ? 1_555 ? 27 AC2 6 DC C 10 ? DC P 10 . ? 1_555 ? 28 AC2 6 HOH U . ? HOH P 101 . ? 1_555 ? 29 AC3 4 ASP A 192 ? ASP A 190 . ? 1_555 ? 30 AC3 4 ASP A 194 ? ASP A 192 . ? 1_555 ? 31 AC3 4 DTP E . ? DTP A 401 . ? 1_555 ? 32 AC3 4 HOH S . ? HOH A 501 . ? 1_555 ? 33 AC4 3 HOH S . ? HOH A 677 . ? 1_555 ? 34 AC4 3 HOH S . ? HOH A 678 . ? 1_555 ? 35 AC4 3 HOH S . ? HOH A 679 . ? 1_555 ? 36 AC5 6 THR A 103 ? THR A 101 . ? 1_555 ? 37 AC5 6 VAL A 105 ? VAL A 103 . ? 1_555 ? 38 AC5 6 ILE A 108 ? ILE A 106 . ? 1_555 ? 39 AC5 6 HOH S . ? HOH A 504 . ? 1_555 ? 40 AC5 6 DG C 9 ? DG P 9 . ? 1_555 ? 41 AC5 6 HOH U . ? HOH P 102 . ? 1_555 ? 42 AC6 5 LYS A 62 ? LYS A 60 . ? 1_555 ? 43 AC6 5 LEU A 64 ? LEU A 62 . ? 1_555 ? 44 AC6 5 VAL A 67 ? VAL A 65 . ? 1_555 ? 45 AC6 5 HOH S . ? HOH A 522 . ? 1_555 ? 46 AC6 5 DC B 3 ? DC D 3 . ? 1_555 ? 47 AC7 4 ASP A 162 ? ASP A 160 . ? 1_555 ? 48 AC7 4 HOH S . ? HOH A 610 . ? 1_555 ? 49 AC7 4 HOH S . ? HOH A 652 . ? 1_555 ? 50 AC7 4 HOH S . ? HOH A 681 . ? 1_555 ? 51 AC8 4 GLN A 266 ? GLN A 264 . ? 1_555 ? 52 AC8 4 TYR A 268 ? TYR A 266 . ? 1_555 ? 53 AC8 4 CYS A 269 ? CYS A 267 . ? 1_555 ? 54 AC8 4 HOH S . ? HOH A 536 . ? 1_555 ? 55 AC9 3 GLN A 221 ? GLN A 219 . ? 1_555 ? 56 AC9 3 THR A 229 ? THR A 227 . ? 1_555 ? 57 AC9 3 LYS A 232 ? LYS A 230 . ? 1_555 ? 58 BC1 4 ASN A 296 ? ASN A 294 . ? 1_555 ? 59 BC1 4 THR A 299 ? THR A 297 . ? 1_555 ? 60 BC1 4 ARG A 301 ? ARG A 299 . ? 1_555 ? 61 BC1 4 HOH S . ? HOH A 621 . ? 1_555 ? 62 BC2 3 ALA A 34 ? ALA A 32 . ? 1_555 ? 63 BC2 3 HIS A 36 ? HIS A 34 . ? 1_555 ? 64 BC2 3 LYS A 37 ? LYS A 35 . ? 1_555 ? 65 BC3 2 ALA A 49 ? ALA A 47 . ? 1_555 ? 66 BC3 2 TYR A 51 ? TYR A 49 . ? 1_555 ? 67 BC4 6 PHE A 202 ? PHE A 200 . ? 1_555 ? 68 BC4 6 THR A 207 ? THR A 205 . ? 1_555 ? 69 BC4 6 GLU A 234 ? GLU A 232 . ? 1_555 ? 70 BC4 6 LEU A 261 ? LEU A 259 . ? 1_555 ? 71 BC4 6 HOH S . ? HOH A 626 . ? 1_555 ? 72 BC4 6 HOH S . ? HOH A 668 . ? 1_555 ? 73 BC5 2 LYS A 56 ? LYS A 54 . ? 1_555 ? 74 BC5 2 ASP A 76 ? ASP A 74 . ? 1_555 ? # _database_PDB_matrix.entry_id 4RQ3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RQ3 _atom_sites.fract_transf_matrix[1][1] 0.020276 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006010 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012550 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018810 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 GLY 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 SER 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 ARG 6 4 ? ? ? A . n A 1 7 LYS 7 5 ? ? ? A . n A 1 8 ALA 8 6 ? ? ? A . n A 1 9 PRO 9 7 ? ? ? A . n A 1 10 GLN 10 8 ? ? ? A . n A 1 11 GLU 11 9 ? ? ? A . n A 1 12 THR 12 10 10 THR THR A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 ILE 17 15 15 ILE ILE A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 MET 20 18 18 MET MET A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 THR 22 20 20 THR THR A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 ALA 25 23 23 ALA ALA A . n A 1 26 ASN 26 24 24 ASN ASN A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ASN 30 28 28 ASN ASN A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 SER 32 30 30 SER SER A . n A 1 33 GLN 33 31 31 GLN GLN A . n A 1 34 ALA 34 32 32 ALA ALA A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 TYR 41 39 39 TYR TYR A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 ALA 44 42 42 ALA ALA A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 SER 46 44 44 SER SER A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ALA 49 47 47 ALA ALA A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 TYR 51 49 49 TYR TYR A . n A 1 52 PRO 52 50 50 PRO PRO A . n A 1 53 HIS 53 51 51 HIS HIS A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 SER 57 55 55 SER SER A . n A 1 58 GLY 58 56 56 GLY GLY A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 GLU 60 58 58 GLU GLU A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 GLU 73 71 71 GLU GLU A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 GLU 77 75 75 GLU GLU A . n A 1 78 PHE 78 76 76 PHE PHE A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 THR 81 79 79 THR THR A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 ARG 85 83 83 ARG ARG A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ARG 91 89 89 ARG ARG A . n A 1 92 GLN 92 90 90 GLN GLN A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 SER 97 95 95 SER SER A . n A 1 98 SER 98 96 96 SER SER A . n A 1 99 ILE 99 97 97 ILE ILE A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLY 109 107 107 GLY GLY A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 LYS 115 113 113 LYS LYS A . n A 1 116 PHE 116 114 114 PHE PHE A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ASP 118 116 116 ASP ASP A . n A 1 119 GLU 119 117 117 GLU GLU A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 THR 123 121 121 THR THR A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 GLU 125 123 123 GLU GLU A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 LYS 129 127 127 LYS LYS A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 GLU 131 129 129 GLU GLU A . n A 1 132 ASP 132 130 130 ASP ASP A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 HIS 137 135 135 HIS HIS A . n A 1 138 GLN 138 136 136 GLN GLN A . n A 1 139 ARG 139 137 137 ARG ARG A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 GLY 141 139 139 GLY GLY A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 TYR 144 142 142 TYR TYR A . n A 1 145 PHE 145 143 143 PHE PHE A . n A 1 146 GLY 146 144 144 GLY GLY A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 PHE 148 146 146 PHE PHE A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 PRO 153 151 151 PRO PRO A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 GLU 156 154 154 GLU GLU A . n A 1 157 MET 157 155 155 MET MET A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 GLN 159 157 157 GLN GLN A . n A 1 160 MET 160 158 158 MET MET A . n A 1 161 GLN 161 159 159 GLN GLN A . n A 1 162 ASP 162 160 160 ASP ASP A . n A 1 163 ILE 163 161 161 ILE ILE A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 ASN 166 164 164 ASN ASN A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 VAL 171 169 169 VAL VAL A . n A 1 172 ASP 172 170 170 ASP ASP A . n A 1 173 SER 173 171 171 SER SER A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 TYR 175 173 173 TYR TYR A . n A 1 176 ILE 176 174 174 ILE ILE A . n A 1 177 ALA 177 175 175 ALA ALA A . n A 1 178 THR 178 176 176 THR THR A . n A 1 179 VAL 179 177 177 VAL VAL A . n A 1 180 CYS 180 178 178 CYS CYS A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 SER 182 180 180 SER SER A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 ARG 184 182 182 ARG ARG A . n A 1 185 ARG 185 183 183 ARG ARG A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 ALA 187 185 185 ALA ALA A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 SER 189 187 187 SER SER A . n A 1 190 SER 190 188 188 SER SER A . n A 1 191 GLY 191 189 189 GLY GLY A . n A 1 192 ASP 192 190 190 ASP ASP A . n A 1 193 MET 193 191 191 MET MET A . n A 1 194 ASP 194 192 192 ASP ASP A . n A 1 195 VAL 195 193 193 VAL VAL A . n A 1 196 LEU 196 194 194 LEU LEU A . n A 1 197 LEU 197 195 195 LEU LEU A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 HIS 199 197 197 HIS HIS A . n A 1 200 PRO 200 198 198 PRO PRO A . n A 1 201 SER 201 199 199 SER SER A . n A 1 202 PHE 202 200 200 PHE PHE A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 THR 207 205 205 THR THR A . n A 1 208 LYS 208 206 206 LYS LYS A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 PRO 210 208 208 PRO PRO A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 HIS 214 212 212 HIS HIS A . n A 1 215 GLN 215 213 213 GLN GLN A . n A 1 216 VAL 216 214 214 VAL VAL A . n A 1 217 VAL 217 215 215 VAL VAL A . n A 1 218 GLU 218 216 216 GLU GLU A . n A 1 219 GLN 219 217 217 GLN GLN A . n A 1 220 LEU 220 218 218 LEU LEU A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 LYS 222 220 220 LYS LYS A . n A 1 223 VAL 223 221 221 VAL VAL A . n A 1 224 HIS 224 222 222 HIS HIS A . n A 1 225 PHE 225 223 223 PHE PHE A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 THR 227 225 225 THR THR A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 THR 229 227 227 THR THR A . n A 1 230 LEU 230 228 228 LEU LEU A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 LYS 232 230 230 LYS LYS A . n A 1 233 GLY 233 231 231 GLY GLY A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 THR 235 233 233 THR THR A . n A 1 236 LYS 236 234 234 LYS LYS A . n A 1 237 PHE 237 235 235 PHE PHE A . n A 1 238 MET 238 236 236 MET MET A . n A 1 239 GLY 239 237 237 GLY GLY A . n A 1 240 VAL 240 238 238 VAL VAL A . n A 1 241 CYS 241 239 239 CYS CYS A . n A 1 242 GLN 242 240 240 GLN GLN A . n A 1 243 LEU 243 241 241 LEU LEU A . n A 1 244 PRO 244 242 242 PRO PRO A . n A 1 245 SER 245 243 243 SER SER A . n A 1 246 LYS 246 244 244 LYS LYS A . n A 1 247 ASN 247 245 245 ASN ASN A . n A 1 248 ASP 248 246 246 ASP ASP A . n A 1 249 GLU 249 247 247 GLU GLU A . n A 1 250 LYS 250 248 248 LYS LYS A . n A 1 251 GLU 251 249 249 GLU GLU A . n A 1 252 TYR 252 250 250 TYR TYR A . n A 1 253 PRO 253 251 251 PRO PRO A . n A 1 254 HIS 254 252 252 HIS HIS A . n A 1 255 ARG 255 253 253 ARG ARG A . n A 1 256 ARG 256 254 254 ARG ARG A . n A 1 257 ILE 257 255 255 ILE ILE A . n A 1 258 ASP 258 256 256 ASP ASP A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 ARG 260 258 258 ARG ARG A . n A 1 261 LEU 261 259 259 LEU LEU A . n A 1 262 ILE 262 260 260 ILE ILE A . n A 1 263 PRO 263 261 261 PRO PRO A . n A 1 264 LYS 264 262 262 LYS LYS A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 GLN 266 264 264 GLN GLN A . n A 1 267 TYR 267 265 265 TYR TYR A . n A 1 268 TYR 268 266 266 TYR TYR A . n A 1 269 CYS 269 267 267 CYS CYS A . n A 1 270 GLY 270 268 268 GLY GLY A . n A 1 271 VAL 271 269 269 VAL VAL A . n A 1 272 LEU 272 270 270 LEU LEU A . n A 1 273 TYR 273 271 271 TYR TYR A . n A 1 274 PHE 274 272 272 PHE PHE A . n A 1 275 THR 275 273 273 THR THR A . n A 1 276 GLY 276 274 274 GLY GLY A . n A 1 277 SER 277 275 275 SER SER A . n A 1 278 ASP 278 276 276 ASP ASP A . n A 1 279 ILE 279 277 277 ILE ILE A . n A 1 280 PHE 280 278 278 PHE PHE A . n A 1 281 ASN 281 279 279 ASN ASN A . n A 1 282 LYS 282 280 280 LYS LYS A . n A 1 283 ASN 283 281 281 ASN ASN A . n A 1 284 MET 284 282 282 MET MET A . n A 1 285 ARG 285 283 283 ARG ARG A . n A 1 286 ALA 286 284 284 ALA ALA A . n A 1 287 HIS 287 285 285 HIS HIS A . n A 1 288 ALA 288 286 286 ALA ALA A . n A 1 289 LEU 289 287 287 LEU LEU A . n A 1 290 GLU 290 288 288 GLU GLU A . n A 1 291 LYS 291 289 289 LYS LYS A . n A 1 292 GLY 292 290 290 GLY GLY A . n A 1 293 PHE 293 291 291 PHE PHE A . n A 1 294 THR 294 292 292 THR THR A . n A 1 295 ILE 295 293 293 ILE ILE A . n A 1 296 ASN 296 294 294 ASN ASN A . n A 1 297 GLU 297 295 295 GLU GLU A . n A 1 298 TYR 298 296 296 TYR TYR A . n A 1 299 THR 299 297 297 THR THR A . n A 1 300 ILE 300 298 298 ILE ILE A . n A 1 301 ARG 301 299 299 ARG ARG A . n A 1 302 PRO 302 300 300 PRO PRO A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 GLY 304 302 302 GLY GLY A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 THR 306 304 304 THR THR A . n A 1 307 GLY 307 305 305 GLY GLY A . n A 1 308 VAL 308 306 306 VAL VAL A . n A 1 309 ALA 309 307 307 ALA ALA A . n A 1 310 GLY 310 308 308 GLY GLY A . n A 1 311 GLU 311 309 309 GLU GLU A . n A 1 312 PRO 312 310 310 PRO PRO A . n A 1 313 LEU 313 311 311 LEU LEU A . n A 1 314 PRO 314 312 312 PRO PRO A . n A 1 315 VAL 315 313 313 VAL VAL A . n A 1 316 ASP 316 314 314 ASP ASP A . n A 1 317 SER 317 315 315 SER SER A . n A 1 318 GLU 318 316 316 GLU GLU A . n A 1 319 LYS 319 317 317 LYS LYS A . n A 1 320 ASP 320 318 318 ASP ASP A . n A 1 321 ILE 321 319 319 ILE ILE A . n A 1 322 PHE 322 320 320 PHE PHE A . n A 1 323 ASP 323 321 321 ASP ASP A . n A 1 324 TYR 324 322 322 TYR TYR A . n A 1 325 ILE 325 323 323 ILE ILE A . n A 1 326 GLN 326 324 324 GLN GLN A . n A 1 327 TRP 327 325 325 TRP TRP A . n A 1 328 LYS 328 326 326 LYS LYS A . n A 1 329 TYR 329 327 327 TYR TYR A . n A 1 330 ARG 330 328 328 ARG ARG A . n A 1 331 GLU 331 329 329 GLU GLU A . n A 1 332 PRO 332 330 330 PRO PRO A . n A 1 333 LYS 333 331 331 LYS LYS A . n A 1 334 ASP 334 332 332 ASP ASP A . n A 1 335 ARG 335 333 333 ARG ARG A . n A 1 336 SER 336 334 334 SER SER A . n A 1 337 GLU 337 335 335 GLU GLU A . n A 1 338 HIS 338 336 ? ? ? A . n A 1 339 HIS 339 337 ? ? ? A . n A 1 340 HIS 340 338 ? ? ? A . n A 1 341 HIS 341 339 ? ? ? A . n A 1 342 HIS 342 340 ? ? ? A . n A 1 343 HIS 343 341 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 8OG 6 6 6 8OG 8OG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 DTP 1 401 1 DTP DTP A . F 6 CA 1 402 2 CA CA A . G 6 CA 1 403 3 CA CA A . H 7 NA 1 404 4 NA NA A . I 7 NA 1 405 5 NA NA A . J 7 NA 1 406 6 NA NA A . K 7 NA 1 407 7 NA NA A . L 8 CL 1 408 8 CL CL A . M 8 CL 1 409 9 CL CL A . N 8 CL 1 410 10 CL CL A . O 8 CL 1 411 11 CL CL A . P 9 ACT 1 412 12 ACT ACT A . Q 9 ACT 1 413 13 ACT ACT A . R 9 ACT 1 414 14 ACT ACT A . S 10 HOH 1 501 1 HOH HOH A . S 10 HOH 2 502 2 HOH HOH A . S 10 HOH 3 503 4 HOH HOH A . S 10 HOH 4 504 5 HOH HOH A . S 10 HOH 5 505 7 HOH HOH A . S 10 HOH 6 506 8 HOH HOH A . S 10 HOH 7 507 9 HOH HOH A . S 10 HOH 8 508 10 HOH HOH A . S 10 HOH 9 509 12 HOH HOH A . S 10 HOH 10 510 13 HOH HOH A . S 10 HOH 11 511 14 HOH HOH A . S 10 HOH 12 512 15 HOH HOH A . S 10 HOH 13 513 16 HOH HOH A . S 10 HOH 14 514 17 HOH HOH A . S 10 HOH 15 515 19 HOH HOH A . S 10 HOH 16 516 20 HOH HOH A . S 10 HOH 17 517 21 HOH HOH A . S 10 HOH 18 518 22 HOH HOH A . S 10 HOH 19 519 23 HOH HOH A . S 10 HOH 20 520 25 HOH HOH A . S 10 HOH 21 521 26 HOH HOH A . S 10 HOH 22 522 28 HOH HOH A . S 10 HOH 23 523 30 HOH HOH A . S 10 HOH 24 524 31 HOH HOH A . S 10 HOH 25 525 32 HOH HOH A . S 10 HOH 26 526 33 HOH HOH A . S 10 HOH 27 527 34 HOH HOH A . S 10 HOH 28 528 35 HOH HOH A . S 10 HOH 29 529 37 HOH HOH A . S 10 HOH 30 530 38 HOH HOH A . S 10 HOH 31 531 39 HOH HOH A . S 10 HOH 32 532 40 HOH HOH A . S 10 HOH 33 533 41 HOH HOH A . S 10 HOH 34 534 42 HOH HOH A . S 10 HOH 35 535 44 HOH HOH A . S 10 HOH 36 536 46 HOH HOH A . S 10 HOH 37 537 47 HOH HOH A . S 10 HOH 38 538 48 HOH HOH A . S 10 HOH 39 539 49 HOH HOH A . S 10 HOH 40 540 50 HOH HOH A . S 10 HOH 41 541 52 HOH HOH A . S 10 HOH 42 542 53 HOH HOH A . S 10 HOH 43 543 54 HOH HOH A . S 10 HOH 44 544 55 HOH HOH A . S 10 HOH 45 545 57 HOH HOH A . S 10 HOH 46 546 58 HOH HOH A . S 10 HOH 47 547 59 HOH HOH A . S 10 HOH 48 548 60 HOH HOH A . S 10 HOH 49 549 63 HOH HOH A . S 10 HOH 50 550 64 HOH HOH A . S 10 HOH 51 551 65 HOH HOH A . S 10 HOH 52 552 67 HOH HOH A . S 10 HOH 53 553 68 HOH HOH A . S 10 HOH 54 554 69 HOH HOH A . S 10 HOH 55 555 70 HOH HOH A . S 10 HOH 56 556 72 HOH HOH A . S 10 HOH 57 557 73 HOH HOH A . S 10 HOH 58 558 74 HOH HOH A . S 10 HOH 59 559 75 HOH HOH A . S 10 HOH 60 560 78 HOH HOH A . S 10 HOH 61 561 80 HOH HOH A . S 10 HOH 62 562 81 HOH HOH A . S 10 HOH 63 563 82 HOH HOH A . S 10 HOH 64 564 83 HOH HOH A . S 10 HOH 65 565 84 HOH HOH A . S 10 HOH 66 566 85 HOH HOH A . S 10 HOH 67 567 87 HOH HOH A . S 10 HOH 68 568 88 HOH HOH A . S 10 HOH 69 569 89 HOH HOH A . S 10 HOH 70 570 92 HOH HOH A . S 10 HOH 71 571 93 HOH HOH A . S 10 HOH 72 572 94 HOH HOH A . S 10 HOH 73 573 98 HOH HOH A . S 10 HOH 74 574 99 HOH HOH A . S 10 HOH 75 575 101 HOH HOH A . S 10 HOH 76 576 102 HOH HOH A . S 10 HOH 77 577 105 HOH HOH A . S 10 HOH 78 578 106 HOH HOH A . S 10 HOH 79 579 107 HOH HOH A . S 10 HOH 80 580 108 HOH HOH A . S 10 HOH 81 581 109 HOH HOH A . S 10 HOH 82 582 110 HOH HOH A . S 10 HOH 83 583 111 HOH HOH A . S 10 HOH 84 584 113 HOH HOH A . S 10 HOH 85 585 114 HOH HOH A . S 10 HOH 86 586 115 HOH HOH A . S 10 HOH 87 587 116 HOH HOH A . S 10 HOH 88 588 117 HOH HOH A . S 10 HOH 89 589 118 HOH HOH A . S 10 HOH 90 590 119 HOH HOH A . S 10 HOH 91 591 120 HOH HOH A . S 10 HOH 92 592 121 HOH HOH A . S 10 HOH 93 593 122 HOH HOH A . S 10 HOH 94 594 123 HOH HOH A . S 10 HOH 95 595 124 HOH HOH A . S 10 HOH 96 596 125 HOH HOH A . S 10 HOH 97 597 126 HOH HOH A . S 10 HOH 98 598 127 HOH HOH A . S 10 HOH 99 599 128 HOH HOH A . S 10 HOH 100 600 129 HOH HOH A . S 10 HOH 101 601 130 HOH HOH A . S 10 HOH 102 602 132 HOH HOH A . S 10 HOH 103 603 133 HOH HOH A . S 10 HOH 104 604 134 HOH HOH A . S 10 HOH 105 605 135 HOH HOH A . S 10 HOH 106 606 136 HOH HOH A . S 10 HOH 107 607 137 HOH HOH A . S 10 HOH 108 608 138 HOH HOH A . S 10 HOH 109 609 140 HOH HOH A . S 10 HOH 110 610 141 HOH HOH A . S 10 HOH 111 611 142 HOH HOH A . S 10 HOH 112 612 144 HOH HOH A . S 10 HOH 113 613 145 HOH HOH A . S 10 HOH 114 614 146 HOH HOH A . S 10 HOH 115 615 147 HOH HOH A . S 10 HOH 116 616 148 HOH HOH A . S 10 HOH 117 617 149 HOH HOH A . S 10 HOH 118 618 151 HOH HOH A . S 10 HOH 119 619 152 HOH HOH A . S 10 HOH 120 620 153 HOH HOH A . S 10 HOH 121 621 154 HOH HOH A . S 10 HOH 122 622 155 HOH HOH A . S 10 HOH 123 623 156 HOH HOH A . S 10 HOH 124 624 158 HOH HOH A . S 10 HOH 125 625 159 HOH HOH A . S 10 HOH 126 626 160 HOH HOH A . S 10 HOH 127 627 162 HOH HOH A . S 10 HOH 128 628 164 HOH HOH A . S 10 HOH 129 629 165 HOH HOH A . S 10 HOH 130 630 166 HOH HOH A . S 10 HOH 131 631 167 HOH HOH A . S 10 HOH 132 632 168 HOH HOH A . S 10 HOH 133 633 169 HOH HOH A . S 10 HOH 134 634 171 HOH HOH A . S 10 HOH 135 635 172 HOH HOH A . S 10 HOH 136 636 173 HOH HOH A . S 10 HOH 137 637 175 HOH HOH A . S 10 HOH 138 638 177 HOH HOH A . S 10 HOH 139 639 178 HOH HOH A . S 10 HOH 140 640 180 HOH HOH A . S 10 HOH 141 641 181 HOH HOH A . S 10 HOH 142 642 184 HOH HOH A . S 10 HOH 143 643 185 HOH HOH A . S 10 HOH 144 644 186 HOH HOH A . S 10 HOH 145 645 188 HOH HOH A . S 10 HOH 146 646 190 HOH HOH A . S 10 HOH 147 647 192 HOH HOH A . S 10 HOH 148 648 194 HOH HOH A . S 10 HOH 149 649 195 HOH HOH A . S 10 HOH 150 650 196 HOH HOH A . S 10 HOH 151 651 198 HOH HOH A . S 10 HOH 152 652 199 HOH HOH A . S 10 HOH 153 653 201 HOH HOH A . S 10 HOH 154 654 203 HOH HOH A . S 10 HOH 155 655 205 HOH HOH A . S 10 HOH 156 656 207 HOH HOH A . S 10 HOH 157 657 208 HOH HOH A . S 10 HOH 158 658 210 HOH HOH A . S 10 HOH 159 659 213 HOH HOH A . S 10 HOH 160 660 214 HOH HOH A . S 10 HOH 161 661 215 HOH HOH A . S 10 HOH 162 662 217 HOH HOH A . S 10 HOH 163 663 218 HOH HOH A . S 10 HOH 164 664 219 HOH HOH A . S 10 HOH 165 665 220 HOH HOH A . S 10 HOH 166 666 221 HOH HOH A . S 10 HOH 167 667 222 HOH HOH A . S 10 HOH 168 668 224 HOH HOH A . S 10 HOH 169 669 225 HOH HOH A . S 10 HOH 170 670 226 HOH HOH A . S 10 HOH 171 671 227 HOH HOH A . S 10 HOH 172 672 228 HOH HOH A . S 10 HOH 173 673 229 HOH HOH A . S 10 HOH 174 674 230 HOH HOH A . S 10 HOH 175 675 231 HOH HOH A . S 10 HOH 176 676 232 HOH HOH A . S 10 HOH 177 677 233 HOH HOH A . S 10 HOH 178 678 234 HOH HOH A . S 10 HOH 179 679 235 HOH HOH A . S 10 HOH 180 680 239 HOH HOH A . S 10 HOH 181 681 240 HOH HOH A . S 10 HOH 182 682 241 HOH HOH A . S 10 HOH 183 683 242 HOH HOH A . T 10 HOH 1 101 27 HOH HOH D . T 10 HOH 2 102 36 HOH HOH D . T 10 HOH 3 103 43 HOH HOH D . T 10 HOH 4 104 56 HOH HOH D . T 10 HOH 5 105 66 HOH HOH D . T 10 HOH 6 106 79 HOH HOH D . T 10 HOH 7 107 139 HOH HOH D . T 10 HOH 8 108 143 HOH HOH D . T 10 HOH 9 109 163 HOH HOH D . T 10 HOH 10 110 183 HOH HOH D . T 10 HOH 11 111 189 HOH HOH D . T 10 HOH 12 112 197 HOH HOH D . U 10 HOH 1 101 3 HOH HOH P . U 10 HOH 2 102 6 HOH HOH P . U 10 HOH 3 103 24 HOH HOH P . U 10 HOH 4 104 76 HOH HOH P . U 10 HOH 5 105 90 HOH HOH P . U 10 HOH 6 106 161 HOH HOH P . U 10 HOH 7 107 174 HOH HOH P . U 10 HOH 8 108 176 HOH HOH P . U 10 HOH 9 109 179 HOH HOH P . U 10 HOH 10 110 191 HOH HOH P . U 10 HOH 11 111 200 HOH HOH P . U 10 HOH 12 112 238 HOH HOH P . V 10 HOH 1 101 11 HOH HOH T . V 10 HOH 2 102 18 HOH HOH T . V 10 HOH 3 103 29 HOH HOH T . V 10 HOH 4 104 45 HOH HOH T . V 10 HOH 5 105 51 HOH HOH T . V 10 HOH 6 106 61 HOH HOH T . V 10 HOH 7 107 62 HOH HOH T . V 10 HOH 8 108 71 HOH HOH T . V 10 HOH 9 109 77 HOH HOH T . V 10 HOH 10 110 86 HOH HOH T . V 10 HOH 11 111 91 HOH HOH T . V 10 HOH 12 112 95 HOH HOH T . V 10 HOH 13 113 96 HOH HOH T . V 10 HOH 14 114 97 HOH HOH T . V 10 HOH 15 115 100 HOH HOH T . V 10 HOH 16 116 103 HOH HOH T . V 10 HOH 17 117 104 HOH HOH T . V 10 HOH 18 118 112 HOH HOH T . V 10 HOH 19 119 131 HOH HOH T . V 10 HOH 20 120 150 HOH HOH T . V 10 HOH 21 121 157 HOH HOH T . V 10 HOH 22 122 170 HOH HOH T . V 10 HOH 23 123 182 HOH HOH T . V 10 HOH 24 124 187 HOH HOH T . V 10 HOH 25 125 193 HOH HOH T . V 10 HOH 26 126 202 HOH HOH T . V 10 HOH 27 127 204 HOH HOH T . V 10 HOH 28 128 206 HOH HOH T . V 10 HOH 29 129 209 HOH HOH T . V 10 HOH 30 130 211 HOH HOH T . V 10 HOH 31 131 212 HOH HOH T . V 10 HOH 32 132 216 HOH HOH T . V 10 HOH 33 133 223 HOH HOH T . V 10 HOH 34 134 236 HOH HOH T . V 10 HOH 35 135 237 HOH HOH T . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id D _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7530 ? 1 MORE -128 ? 1 'SSA (A^2)' 20090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A LEU 64 ? A LEU 62 ? 1_555 88.6 ? 2 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 93.3 ? 3 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 95.4 ? 4 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? S HOH . ? A HOH 522 ? 1_555 82.1 ? 5 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? S HOH . ? A HOH 522 ? 1_555 170.1 ? 6 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? S HOH . ? A HOH 522 ? 1_555 88.6 ? 7 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 177.5 ? 8 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 93.9 ? 9 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 86.9 ? 10 O ? S HOH . ? A HOH 522 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 95.4 ? 11 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 105 ? A VAL 103 ? 1_555 95.7 ? 12 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 91.0 ? 13 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 88.2 ? 14 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? S HOH . ? A HOH 504 ? 1_555 87.3 ? 15 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? S HOH . ? A HOH 504 ? 1_555 89.8 ? 16 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? S HOH . ? A HOH 504 ? 1_555 177.2 ? 17 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 171.5 ? 18 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 92.2 ? 19 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 92.3 ? 20 O ? S HOH . ? A HOH 504 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 89.7 ? 21 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? U HOH . ? P HOH 102 ? 1_555 84.7 ? 22 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? U HOH . ? P HOH 102 ? 1_555 169.7 ? 23 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? U HOH . ? P HOH 102 ? 1_555 81.5 ? 24 O ? S HOH . ? A HOH 504 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? U HOH . ? P HOH 102 ? 1_555 100.5 ? 25 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? U HOH . ? P HOH 102 ? 1_555 88.0 ? 26 OD1 ? A ASP 162 ? A ASP 160 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 610 ? 1_555 168.8 ? 27 OD1 ? A ASP 162 ? A ASP 160 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 652 ? 1_555 79.4 ? 28 O ? S HOH . ? A HOH 610 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 652 ? 1_555 92.3 ? 29 OD1 ? A ASP 162 ? A ASP 160 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 681 ? 1_555 110.6 ? 30 O ? S HOH . ? A HOH 610 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 681 ? 1_555 77.0 ? 31 O ? S HOH . ? A HOH 652 ? 1_555 NA ? K NA . ? A NA 407 ? 1_555 O ? S HOH . ? A HOH 681 ? 1_555 92.4 ? 32 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 44.9 ? 33 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 111.4 ? 34 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 85.2 ? 35 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 92.0 ? 36 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 132.7 ? 37 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 97.6 ? 38 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 98.4 ? 39 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 59.7 ? 40 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 85.3 ? 41 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 167.4 ? 42 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 168.5 ? 43 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 144.5 ? 44 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 78.8 ? 45 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 81.2 ? 46 O2A ? E DTP . ? A DTP 401 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 87.4 ? 47 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 76.6 ? 48 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 91.0 ? 49 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 162.8 ? 50 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 97.3 ? 51 O2A ? E DTP . ? A DTP 401 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 78.3 ? 52 "O3'" ? C DC 10 ? P DC 10 ? 1_555 CA ? F CA . ? A CA 402 ? 1_555 O ? U HOH . ? P HOH 101 ? 1_555 95.0 ? 53 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 92.0 ? 54 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2G ? E DTP . ? A DTP 401 ? 1_555 87.0 ? 55 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2G ? E DTP . ? A DTP 401 ? 1_555 169.5 ? 56 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 165.0 ? 57 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 96.0 ? 58 O2G ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 82.9 ? 59 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 79.0 ? 60 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 85.8 ? 61 O2G ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 83.8 ? 62 O2B ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 89.0 ? 63 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O ? S HOH . ? A HOH 501 ? 1_555 107.6 ? 64 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O ? S HOH . ? A HOH 501 ? 1_555 95.0 ? 65 O2G ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O ? S HOH . ? A HOH 501 ? 1_555 95.2 ? 66 O2B ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O ? S HOH . ? A HOH 501 ? 1_555 84.3 ? 67 O2A ? E DTP . ? A DTP 401 ? 1_555 CA ? G CA . ? A CA 403 ? 1_555 O ? S HOH . ? A HOH 501 ? 1_555 173.3 ? 68 O ? S HOH . ? A HOH 677 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? S HOH . ? A HOH 678 ? 1_555 77.8 ? 69 O ? S HOH . ? A HOH 677 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? S HOH . ? A HOH 679 ? 1_555 79.2 ? 70 O ? S HOH . ? A HOH 678 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? S HOH . ? A HOH 679 ? 1_555 83.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-15 2 'Structure model' 1 1 2015-05-06 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.value' 23 3 'Structure model' '_struct_conn.pdbx_dist_value' 24 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 3 'Structure model' '_struct_ref_seq_dif.details' 40 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.8.0073 ? 2 MOSFLM 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.483 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.124 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 29 ? ? -101.45 -60.98 2 1 CYS A 178 ? ? -111.86 -140.45 3 1 ASP A 246 ? ? 58.81 9.53 4 1 ASN A 294 ? ? -128.96 -168.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A GLY 0 ? A GLY 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A SER 2 ? A SER 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A ARG 4 ? A ARG 6 7 1 Y 1 A LYS 5 ? A LYS 7 8 1 Y 1 A ALA 6 ? A ALA 8 9 1 Y 1 A PRO 7 ? A PRO 9 10 1 Y 1 A GLN 8 ? A GLN 10 11 1 Y 1 A GLU 9 ? A GLU 11 12 1 Y 1 A HIS 336 ? A HIS 338 13 1 Y 1 A HIS 337 ? A HIS 339 14 1 Y 1 A HIS 338 ? A HIS 340 15 1 Y 1 A HIS 339 ? A HIS 341 16 1 Y 1 A HIS 340 ? A HIS 342 17 1 Y 1 A HIS 341 ? A HIS 343 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ACT C C N N 39 ACT O O N N 40 ACT OXT O N N 41 ACT CH3 C N N 42 ACT H1 H N N 43 ACT H2 H N N 44 ACT H3 H N N 45 ALA N N N N 46 ALA CA C N S 47 ALA C C N N 48 ALA O O N N 49 ALA CB C N N 50 ALA OXT O N N 51 ALA H H N N 52 ALA H2 H N N 53 ALA HA H N N 54 ALA HB1 H N N 55 ALA HB2 H N N 56 ALA HB3 H N N 57 ALA HXT H N N 58 ARG N N N N 59 ARG CA C N S 60 ARG C C N N 61 ARG O O N N 62 ARG CB C N N 63 ARG CG C N N 64 ARG CD C N N 65 ARG NE N N N 66 ARG CZ C N N 67 ARG NH1 N N N 68 ARG NH2 N N N 69 ARG OXT O N N 70 ARG H H N N 71 ARG H2 H N N 72 ARG HA H N N 73 ARG HB2 H N N 74 ARG HB3 H N N 75 ARG HG2 H N N 76 ARG HG3 H N N 77 ARG HD2 H N N 78 ARG HD3 H N N 79 ARG HE H N N 80 ARG HH11 H N N 81 ARG HH12 H N N 82 ARG HH21 H N N 83 ARG HH22 H N N 84 ARG HXT H N N 85 ASN N N N N 86 ASN CA C N S 87 ASN C C N N 88 ASN O O N N 89 ASN CB C N N 90 ASN CG C N N 91 ASN OD1 O N N 92 ASN ND2 N N N 93 ASN OXT O N N 94 ASN H H N N 95 ASN H2 H N N 96 ASN HA H N N 97 ASN HB2 H N N 98 ASN HB3 H N N 99 ASN HD21 H N N 100 ASN HD22 H N N 101 ASN HXT H N N 102 ASP N N N N 103 ASP CA C N S 104 ASP C C N N 105 ASP O O N N 106 ASP CB C N N 107 ASP CG C N N 108 ASP OD1 O N N 109 ASP OD2 O N N 110 ASP OXT O N N 111 ASP H H N N 112 ASP H2 H N N 113 ASP HA H N N 114 ASP HB2 H N N 115 ASP HB3 H N N 116 ASP HD2 H N N 117 ASP HXT H N N 118 CA CA CA N N 119 CL CL CL N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 DA OP3 O N N 135 DA P P N N 136 DA OP1 O N N 137 DA OP2 O N N 138 DA "O5'" O N N 139 DA "C5'" C N N 140 DA "C4'" C N R 141 DA "O4'" O N N 142 DA "C3'" C N S 143 DA "O3'" O N N 144 DA "C2'" C N N 145 DA "C1'" C N R 146 DA N9 N Y N 147 DA C8 C Y N 148 DA N7 N Y N 149 DA C5 C Y N 150 DA C6 C Y N 151 DA N6 N N N 152 DA N1 N Y N 153 DA C2 C Y N 154 DA N3 N Y N 155 DA C4 C Y N 156 DA HOP3 H N N 157 DA HOP2 H N N 158 DA "H5'" H N N 159 DA "H5''" H N N 160 DA "H4'" H N N 161 DA "H3'" H N N 162 DA "HO3'" H N N 163 DA "H2'" H N N 164 DA "H2''" H N N 165 DA "H1'" H N N 166 DA H8 H N N 167 DA H61 H N N 168 DA H62 H N N 169 DA H2 H N N 170 DC OP3 O N N 171 DC P P N N 172 DC OP1 O N N 173 DC OP2 O N N 174 DC "O5'" O N N 175 DC "C5'" C N N 176 DC "C4'" C N R 177 DC "O4'" O N N 178 DC "C3'" C N S 179 DC "O3'" O N N 180 DC "C2'" C N N 181 DC "C1'" C N R 182 DC N1 N N N 183 DC C2 C N N 184 DC O2 O N N 185 DC N3 N N N 186 DC C4 C N N 187 DC N4 N N N 188 DC C5 C N N 189 DC C6 C N N 190 DC HOP3 H N N 191 DC HOP2 H N N 192 DC "H5'" H N N 193 DC "H5''" H N N 194 DC "H4'" H N N 195 DC "H3'" H N N 196 DC "HO3'" H N N 197 DC "H2'" H N N 198 DC "H2''" H N N 199 DC "H1'" H N N 200 DC H41 H N N 201 DC H42 H N N 202 DC H5 H N N 203 DC H6 H N N 204 DG OP3 O N N 205 DG P P N N 206 DG OP1 O N N 207 DG OP2 O N N 208 DG "O5'" O N N 209 DG "C5'" C N N 210 DG "C4'" C N R 211 DG "O4'" O N N 212 DG "C3'" C N S 213 DG "O3'" O N N 214 DG "C2'" C N N 215 DG "C1'" C N R 216 DG N9 N Y N 217 DG C8 C Y N 218 DG N7 N Y N 219 DG C5 C Y N 220 DG C6 C N N 221 DG O6 O N N 222 DG N1 N N N 223 DG C2 C N N 224 DG N2 N N N 225 DG N3 N N N 226 DG C4 C Y N 227 DG HOP3 H N N 228 DG HOP2 H N N 229 DG "H5'" H N N 230 DG "H5''" H N N 231 DG "H4'" H N N 232 DG "H3'" H N N 233 DG "HO3'" H N N 234 DG "H2'" H N N 235 DG "H2''" H N N 236 DG "H1'" H N N 237 DG H8 H N N 238 DG H1 H N N 239 DG H21 H N N 240 DG H22 H N N 241 DT OP3 O N N 242 DT P P N N 243 DT OP1 O N N 244 DT OP2 O N N 245 DT "O5'" O N N 246 DT "C5'" C N N 247 DT "C4'" C N R 248 DT "O4'" O N N 249 DT "C3'" C N S 250 DT "O3'" O N N 251 DT "C2'" C N N 252 DT "C1'" C N R 253 DT N1 N N N 254 DT C2 C N N 255 DT O2 O N N 256 DT N3 N N N 257 DT C4 C N N 258 DT O4 O N N 259 DT C5 C N N 260 DT C7 C N N 261 DT C6 C N N 262 DT HOP3 H N N 263 DT HOP2 H N N 264 DT "H5'" H N N 265 DT "H5''" H N N 266 DT "H4'" H N N 267 DT "H3'" H N N 268 DT "HO3'" H N N 269 DT "H2'" H N N 270 DT "H2''" H N N 271 DT "H1'" H N N 272 DT H3 H N N 273 DT H71 H N N 274 DT H72 H N N 275 DT H73 H N N 276 DT H6 H N N 277 DTP PG P N N 278 DTP O1G O N N 279 DTP O2G O N N 280 DTP O3G O N N 281 DTP PB P N S 282 DTP O1B O N N 283 DTP O2B O N N 284 DTP O3B O N N 285 DTP PA P N S 286 DTP O1A O N N 287 DTP O2A O N N 288 DTP O3A O N N 289 DTP "O5'" O N N 290 DTP "C5'" C N N 291 DTP "C4'" C N R 292 DTP "O4'" O N N 293 DTP "C3'" C N S 294 DTP "O3'" O N N 295 DTP "C2'" C N N 296 DTP "C1'" C N R 297 DTP N9 N Y N 298 DTP C8 C Y N 299 DTP N7 N Y N 300 DTP C5 C Y N 301 DTP C6 C Y N 302 DTP N6 N N N 303 DTP N1 N Y N 304 DTP C2 C Y N 305 DTP N3 N Y N 306 DTP C4 C Y N 307 DTP HOG2 H N N 308 DTP HOG3 H N N 309 DTP HOB2 H N N 310 DTP HOA2 H N N 311 DTP "H5'1" H N N 312 DTP "H5'2" H N N 313 DTP "H4'" H N N 314 DTP "H3'" H N N 315 DTP "HO3'" H N N 316 DTP "H2'1" H N N 317 DTP "H2'2" H N N 318 DTP "H1'" H N N 319 DTP H8 H N N 320 DTP HN61 H N N 321 DTP HN62 H N N 322 DTP H2 H N N 323 GLN N N N N 324 GLN CA C N S 325 GLN C C N N 326 GLN O O N N 327 GLN CB C N N 328 GLN CG C N N 329 GLN CD C N N 330 GLN OE1 O N N 331 GLN NE2 N N N 332 GLN OXT O N N 333 GLN H H N N 334 GLN H2 H N N 335 GLN HA H N N 336 GLN HB2 H N N 337 GLN HB3 H N N 338 GLN HG2 H N N 339 GLN HG3 H N N 340 GLN HE21 H N N 341 GLN HE22 H N N 342 GLN HXT H N N 343 GLU N N N N 344 GLU CA C N S 345 GLU C C N N 346 GLU O O N N 347 GLU CB C N N 348 GLU CG C N N 349 GLU CD C N N 350 GLU OE1 O N N 351 GLU OE2 O N N 352 GLU OXT O N N 353 GLU H H N N 354 GLU H2 H N N 355 GLU HA H N N 356 GLU HB2 H N N 357 GLU HB3 H N N 358 GLU HG2 H N N 359 GLU HG3 H N N 360 GLU HE2 H N N 361 GLU HXT H N N 362 GLY N N N N 363 GLY CA C N N 364 GLY C C N N 365 GLY O O N N 366 GLY OXT O N N 367 GLY H H N N 368 GLY H2 H N N 369 GLY HA2 H N N 370 GLY HA3 H N N 371 GLY HXT H N N 372 HIS N N N N 373 HIS CA C N S 374 HIS C C N N 375 HIS O O N N 376 HIS CB C N N 377 HIS CG C Y N 378 HIS ND1 N Y N 379 HIS CD2 C Y N 380 HIS CE1 C Y N 381 HIS NE2 N Y N 382 HIS OXT O N N 383 HIS H H N N 384 HIS H2 H N N 385 HIS HA H N N 386 HIS HB2 H N N 387 HIS HB3 H N N 388 HIS HD1 H N N 389 HIS HD2 H N N 390 HIS HE1 H N N 391 HIS HE2 H N N 392 HIS HXT H N N 393 HOH O O N N 394 HOH H1 H N N 395 HOH H2 H N N 396 ILE N N N N 397 ILE CA C N S 398 ILE C C N N 399 ILE O O N N 400 ILE CB C N S 401 ILE CG1 C N N 402 ILE CG2 C N N 403 ILE CD1 C N N 404 ILE OXT O N N 405 ILE H H N N 406 ILE H2 H N N 407 ILE HA H N N 408 ILE HB H N N 409 ILE HG12 H N N 410 ILE HG13 H N N 411 ILE HG21 H N N 412 ILE HG22 H N N 413 ILE HG23 H N N 414 ILE HD11 H N N 415 ILE HD12 H N N 416 ILE HD13 H N N 417 ILE HXT H N N 418 LEU N N N N 419 LEU CA C N S 420 LEU C C N N 421 LEU O O N N 422 LEU CB C N N 423 LEU CG C N N 424 LEU CD1 C N N 425 LEU CD2 C N N 426 LEU OXT O N N 427 LEU H H N N 428 LEU H2 H N N 429 LEU HA H N N 430 LEU HB2 H N N 431 LEU HB3 H N N 432 LEU HG H N N 433 LEU HD11 H N N 434 LEU HD12 H N N 435 LEU HD13 H N N 436 LEU HD21 H N N 437 LEU HD22 H N N 438 LEU HD23 H N N 439 LEU HXT H N N 440 LYS N N N N 441 LYS CA C N S 442 LYS C C N N 443 LYS O O N N 444 LYS CB C N N 445 LYS CG C N N 446 LYS CD C N N 447 LYS CE C N N 448 LYS NZ N N N 449 LYS OXT O N N 450 LYS H H N N 451 LYS H2 H N N 452 LYS HA H N N 453 LYS HB2 H N N 454 LYS HB3 H N N 455 LYS HG2 H N N 456 LYS HG3 H N N 457 LYS HD2 H N N 458 LYS HD3 H N N 459 LYS HE2 H N N 460 LYS HE3 H N N 461 LYS HZ1 H N N 462 LYS HZ2 H N N 463 LYS HZ3 H N N 464 LYS HXT H N N 465 MET N N N N 466 MET CA C N S 467 MET C C N N 468 MET O O N N 469 MET CB C N N 470 MET CG C N N 471 MET SD S N N 472 MET CE C N N 473 MET OXT O N N 474 MET H H N N 475 MET H2 H N N 476 MET HA H N N 477 MET HB2 H N N 478 MET HB3 H N N 479 MET HG2 H N N 480 MET HG3 H N N 481 MET HE1 H N N 482 MET HE2 H N N 483 MET HE3 H N N 484 MET HXT H N N 485 NA NA NA N N 486 PHE N N N N 487 PHE CA C N S 488 PHE C C N N 489 PHE O O N N 490 PHE CB C N N 491 PHE CG C Y N 492 PHE CD1 C Y N 493 PHE CD2 C Y N 494 PHE CE1 C Y N 495 PHE CE2 C Y N 496 PHE CZ C Y N 497 PHE OXT O N N 498 PHE H H N N 499 PHE H2 H N N 500 PHE HA H N N 501 PHE HB2 H N N 502 PHE HB3 H N N 503 PHE HD1 H N N 504 PHE HD2 H N N 505 PHE HE1 H N N 506 PHE HE2 H N N 507 PHE HZ H N N 508 PHE HXT H N N 509 PRO N N N N 510 PRO CA C N S 511 PRO C C N N 512 PRO O O N N 513 PRO CB C N N 514 PRO CG C N N 515 PRO CD C N N 516 PRO OXT O N N 517 PRO H H N N 518 PRO HA H N N 519 PRO HB2 H N N 520 PRO HB3 H N N 521 PRO HG2 H N N 522 PRO HG3 H N N 523 PRO HD2 H N N 524 PRO HD3 H N N 525 PRO HXT H N N 526 SER N N N N 527 SER CA C N S 528 SER C C N N 529 SER O O N N 530 SER CB C N N 531 SER OG O N N 532 SER OXT O N N 533 SER H H N N 534 SER H2 H N N 535 SER HA H N N 536 SER HB2 H N N 537 SER HB3 H N N 538 SER HG H N N 539 SER HXT H N N 540 THR N N N N 541 THR CA C N S 542 THR C C N N 543 THR O O N N 544 THR CB C N R 545 THR OG1 O N N 546 THR CG2 C N N 547 THR OXT O N N 548 THR H H N N 549 THR H2 H N N 550 THR HA H N N 551 THR HB H N N 552 THR HG1 H N N 553 THR HG21 H N N 554 THR HG22 H N N 555 THR HG23 H N N 556 THR HXT H N N 557 TRP N N N N 558 TRP CA C N S 559 TRP C C N N 560 TRP O O N N 561 TRP CB C N N 562 TRP CG C Y N 563 TRP CD1 C Y N 564 TRP CD2 C Y N 565 TRP NE1 N Y N 566 TRP CE2 C Y N 567 TRP CE3 C Y N 568 TRP CZ2 C Y N 569 TRP CZ3 C Y N 570 TRP CH2 C Y N 571 TRP OXT O N N 572 TRP H H N N 573 TRP H2 H N N 574 TRP HA H N N 575 TRP HB2 H N N 576 TRP HB3 H N N 577 TRP HD1 H N N 578 TRP HE1 H N N 579 TRP HE3 H N N 580 TRP HZ2 H N N 581 TRP HZ3 H N N 582 TRP HH2 H N N 583 TRP HXT H N N 584 TYR N N N N 585 TYR CA C N S 586 TYR C C N N 587 TYR O O N N 588 TYR CB C N N 589 TYR CG C Y N 590 TYR CD1 C Y N 591 TYR CD2 C Y N 592 TYR CE1 C Y N 593 TYR CE2 C Y N 594 TYR CZ C Y N 595 TYR OH O N N 596 TYR OXT O N N 597 TYR H H N N 598 TYR H2 H N N 599 TYR HA H N N 600 TYR HB2 H N N 601 TYR HB3 H N N 602 TYR HD1 H N N 603 TYR HD2 H N N 604 TYR HE1 H N N 605 TYR HE2 H N N 606 TYR HH H N N 607 TYR HXT H N N 608 VAL N N N N 609 VAL CA C N S 610 VAL C C N N 611 VAL O O N N 612 VAL CB C N N 613 VAL CG1 C N N 614 VAL CG2 C N N 615 VAL OXT O N N 616 VAL H H N N 617 VAL H2 H N N 618 VAL HA H N N 619 VAL HB H N N 620 VAL HG11 H N N 621 VAL HG12 H N N 622 VAL HG13 H N N 623 VAL HG21 H N N 624 VAL HG22 H N N 625 VAL HG23 H N N 626 VAL HXT H N N 627 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ACT C O doub N N 41 ACT C OXT sing N N 42 ACT C CH3 sing N N 43 ACT CH3 H1 sing N N 44 ACT CH3 H2 sing N N 45 ACT CH3 H3 sing N N 46 ALA N CA sing N N 47 ALA N H sing N N 48 ALA N H2 sing N N 49 ALA CA C sing N N 50 ALA CA CB sing N N 51 ALA CA HA sing N N 52 ALA C O doub N N 53 ALA C OXT sing N N 54 ALA CB HB1 sing N N 55 ALA CB HB2 sing N N 56 ALA CB HB3 sing N N 57 ALA OXT HXT sing N N 58 ARG N CA sing N N 59 ARG N H sing N N 60 ARG N H2 sing N N 61 ARG CA C sing N N 62 ARG CA CB sing N N 63 ARG CA HA sing N N 64 ARG C O doub N N 65 ARG C OXT sing N N 66 ARG CB CG sing N N 67 ARG CB HB2 sing N N 68 ARG CB HB3 sing N N 69 ARG CG CD sing N N 70 ARG CG HG2 sing N N 71 ARG CG HG3 sing N N 72 ARG CD NE sing N N 73 ARG CD HD2 sing N N 74 ARG CD HD3 sing N N 75 ARG NE CZ sing N N 76 ARG NE HE sing N N 77 ARG CZ NH1 sing N N 78 ARG CZ NH2 doub N N 79 ARG NH1 HH11 sing N N 80 ARG NH1 HH12 sing N N 81 ARG NH2 HH21 sing N N 82 ARG NH2 HH22 sing N N 83 ARG OXT HXT sing N N 84 ASN N CA sing N N 85 ASN N H sing N N 86 ASN N H2 sing N N 87 ASN CA C sing N N 88 ASN CA CB sing N N 89 ASN CA HA sing N N 90 ASN C O doub N N 91 ASN C OXT sing N N 92 ASN CB CG sing N N 93 ASN CB HB2 sing N N 94 ASN CB HB3 sing N N 95 ASN CG OD1 doub N N 96 ASN CG ND2 sing N N 97 ASN ND2 HD21 sing N N 98 ASN ND2 HD22 sing N N 99 ASN OXT HXT sing N N 100 ASP N CA sing N N 101 ASP N H sing N N 102 ASP N H2 sing N N 103 ASP CA C sing N N 104 ASP CA CB sing N N 105 ASP CA HA sing N N 106 ASP C O doub N N 107 ASP C OXT sing N N 108 ASP CB CG sing N N 109 ASP CB HB2 sing N N 110 ASP CB HB3 sing N N 111 ASP CG OD1 doub N N 112 ASP CG OD2 sing N N 113 ASP OD2 HD2 sing N N 114 ASP OXT HXT sing N N 115 CYS N CA sing N N 116 CYS N H sing N N 117 CYS N H2 sing N N 118 CYS CA C sing N N 119 CYS CA CB sing N N 120 CYS CA HA sing N N 121 CYS C O doub N N 122 CYS C OXT sing N N 123 CYS CB SG sing N N 124 CYS CB HB2 sing N N 125 CYS CB HB3 sing N N 126 CYS SG HG sing N N 127 CYS OXT HXT sing N N 128 DA OP3 P sing N N 129 DA OP3 HOP3 sing N N 130 DA P OP1 doub N N 131 DA P OP2 sing N N 132 DA P "O5'" sing N N 133 DA OP2 HOP2 sing N N 134 DA "O5'" "C5'" sing N N 135 DA "C5'" "C4'" sing N N 136 DA "C5'" "H5'" sing N N 137 DA "C5'" "H5''" sing N N 138 DA "C4'" "O4'" sing N N 139 DA "C4'" "C3'" sing N N 140 DA "C4'" "H4'" sing N N 141 DA "O4'" "C1'" sing N N 142 DA "C3'" "O3'" sing N N 143 DA "C3'" "C2'" sing N N 144 DA "C3'" "H3'" sing N N 145 DA "O3'" "HO3'" sing N N 146 DA "C2'" "C1'" sing N N 147 DA "C2'" "H2'" sing N N 148 DA "C2'" "H2''" sing N N 149 DA "C1'" N9 sing N N 150 DA "C1'" "H1'" sing N N 151 DA N9 C8 sing Y N 152 DA N9 C4 sing Y N 153 DA C8 N7 doub Y N 154 DA C8 H8 sing N N 155 DA N7 C5 sing Y N 156 DA C5 C6 sing Y N 157 DA C5 C4 doub Y N 158 DA C6 N6 sing N N 159 DA C6 N1 doub Y N 160 DA N6 H61 sing N N 161 DA N6 H62 sing N N 162 DA N1 C2 sing Y N 163 DA C2 N3 doub Y N 164 DA C2 H2 sing N N 165 DA N3 C4 sing Y N 166 DC OP3 P sing N N 167 DC OP3 HOP3 sing N N 168 DC P OP1 doub N N 169 DC P OP2 sing N N 170 DC P "O5'" sing N N 171 DC OP2 HOP2 sing N N 172 DC "O5'" "C5'" sing N N 173 DC "C5'" "C4'" sing N N 174 DC "C5'" "H5'" sing N N 175 DC "C5'" "H5''" sing N N 176 DC "C4'" "O4'" sing N N 177 DC "C4'" "C3'" sing N N 178 DC "C4'" "H4'" sing N N 179 DC "O4'" "C1'" sing N N 180 DC "C3'" "O3'" sing N N 181 DC "C3'" "C2'" sing N N 182 DC "C3'" "H3'" sing N N 183 DC "O3'" "HO3'" sing N N 184 DC "C2'" "C1'" sing N N 185 DC "C2'" "H2'" sing N N 186 DC "C2'" "H2''" sing N N 187 DC "C1'" N1 sing N N 188 DC "C1'" "H1'" sing N N 189 DC N1 C2 sing N N 190 DC N1 C6 sing N N 191 DC C2 O2 doub N N 192 DC C2 N3 sing N N 193 DC N3 C4 doub N N 194 DC C4 N4 sing N N 195 DC C4 C5 sing N N 196 DC N4 H41 sing N N 197 DC N4 H42 sing N N 198 DC C5 C6 doub N N 199 DC C5 H5 sing N N 200 DC C6 H6 sing N N 201 DG OP3 P sing N N 202 DG OP3 HOP3 sing N N 203 DG P OP1 doub N N 204 DG P OP2 sing N N 205 DG P "O5'" sing N N 206 DG OP2 HOP2 sing N N 207 DG "O5'" "C5'" sing N N 208 DG "C5'" "C4'" sing N N 209 DG "C5'" "H5'" sing N N 210 DG "C5'" "H5''" sing N N 211 DG "C4'" "O4'" sing N N 212 DG "C4'" "C3'" sing N N 213 DG "C4'" "H4'" sing N N 214 DG "O4'" "C1'" sing N N 215 DG "C3'" "O3'" sing N N 216 DG "C3'" "C2'" sing N N 217 DG "C3'" "H3'" sing N N 218 DG "O3'" "HO3'" sing N N 219 DG "C2'" "C1'" sing N N 220 DG "C2'" "H2'" sing N N 221 DG "C2'" "H2''" sing N N 222 DG "C1'" N9 sing N N 223 DG "C1'" "H1'" sing N N 224 DG N9 C8 sing Y N 225 DG N9 C4 sing Y N 226 DG C8 N7 doub Y N 227 DG C8 H8 sing N N 228 DG N7 C5 sing Y N 229 DG C5 C6 sing N N 230 DG C5 C4 doub Y N 231 DG C6 O6 doub N N 232 DG C6 N1 sing N N 233 DG N1 C2 sing N N 234 DG N1 H1 sing N N 235 DG C2 N2 sing N N 236 DG C2 N3 doub N N 237 DG N2 H21 sing N N 238 DG N2 H22 sing N N 239 DG N3 C4 sing N N 240 DT OP3 P sing N N 241 DT OP3 HOP3 sing N N 242 DT P OP1 doub N N 243 DT P OP2 sing N N 244 DT P "O5'" sing N N 245 DT OP2 HOP2 sing N N 246 DT "O5'" "C5'" sing N N 247 DT "C5'" "C4'" sing N N 248 DT "C5'" "H5'" sing N N 249 DT "C5'" "H5''" sing N N 250 DT "C4'" "O4'" sing N N 251 DT "C4'" "C3'" sing N N 252 DT "C4'" "H4'" sing N N 253 DT "O4'" "C1'" sing N N 254 DT "C3'" "O3'" sing N N 255 DT "C3'" "C2'" sing N N 256 DT "C3'" "H3'" sing N N 257 DT "O3'" "HO3'" sing N N 258 DT "C2'" "C1'" sing N N 259 DT "C2'" "H2'" sing N N 260 DT "C2'" "H2''" sing N N 261 DT "C1'" N1 sing N N 262 DT "C1'" "H1'" sing N N 263 DT N1 C2 sing N N 264 DT N1 C6 sing N N 265 DT C2 O2 doub N N 266 DT C2 N3 sing N N 267 DT N3 C4 sing N N 268 DT N3 H3 sing N N 269 DT C4 O4 doub N N 270 DT C4 C5 sing N N 271 DT C5 C7 sing N N 272 DT C5 C6 doub N N 273 DT C7 H71 sing N N 274 DT C7 H72 sing N N 275 DT C7 H73 sing N N 276 DT C6 H6 sing N N 277 DTP PG O1G doub N N 278 DTP PG O2G sing N N 279 DTP PG O3G sing N N 280 DTP PG O3B sing N N 281 DTP O2G HOG2 sing N N 282 DTP O3G HOG3 sing N N 283 DTP PB O1B doub N N 284 DTP PB O2B sing N N 285 DTP PB O3B sing N N 286 DTP PB O3A sing N N 287 DTP O2B HOB2 sing N N 288 DTP PA O1A doub N N 289 DTP PA O2A sing N N 290 DTP PA O3A sing N N 291 DTP PA "O5'" sing N N 292 DTP O2A HOA2 sing N N 293 DTP "O5'" "C5'" sing N N 294 DTP "C5'" "C4'" sing N N 295 DTP "C5'" "H5'1" sing N N 296 DTP "C5'" "H5'2" sing N N 297 DTP "C4'" "O4'" sing N N 298 DTP "C4'" "C3'" sing N N 299 DTP "C4'" "H4'" sing N N 300 DTP "O4'" "C1'" sing N N 301 DTP "C3'" "O3'" sing N N 302 DTP "C3'" "C2'" sing N N 303 DTP "C3'" "H3'" sing N N 304 DTP "O3'" "HO3'" sing N N 305 DTP "C2'" "C1'" sing N N 306 DTP "C2'" "H2'1" sing N N 307 DTP "C2'" "H2'2" sing N N 308 DTP "C1'" N9 sing N N 309 DTP "C1'" "H1'" sing N N 310 DTP N9 C8 sing Y N 311 DTP N9 C4 sing Y N 312 DTP C8 N7 doub Y N 313 DTP C8 H8 sing N N 314 DTP N7 C5 sing Y N 315 DTP C5 C6 sing Y N 316 DTP C5 C4 doub Y N 317 DTP C6 N6 sing N N 318 DTP C6 N1 doub Y N 319 DTP N6 HN61 sing N N 320 DTP N6 HN62 sing N N 321 DTP N1 C2 sing Y N 322 DTP C2 N3 doub Y N 323 DTP C2 H2 sing N N 324 DTP N3 C4 sing Y N 325 GLN N CA sing N N 326 GLN N H sing N N 327 GLN N H2 sing N N 328 GLN CA C sing N N 329 GLN CA CB sing N N 330 GLN CA HA sing N N 331 GLN C O doub N N 332 GLN C OXT sing N N 333 GLN CB CG sing N N 334 GLN CB HB2 sing N N 335 GLN CB HB3 sing N N 336 GLN CG CD sing N N 337 GLN CG HG2 sing N N 338 GLN CG HG3 sing N N 339 GLN CD OE1 doub N N 340 GLN CD NE2 sing N N 341 GLN NE2 HE21 sing N N 342 GLN NE2 HE22 sing N N 343 GLN OXT HXT sing N N 344 GLU N CA sing N N 345 GLU N H sing N N 346 GLU N H2 sing N N 347 GLU CA C sing N N 348 GLU CA CB sing N N 349 GLU CA HA sing N N 350 GLU C O doub N N 351 GLU C OXT sing N N 352 GLU CB CG sing N N 353 GLU CB HB2 sing N N 354 GLU CB HB3 sing N N 355 GLU CG CD sing N N 356 GLU CG HG2 sing N N 357 GLU CG HG3 sing N N 358 GLU CD OE1 doub N N 359 GLU CD OE2 sing N N 360 GLU OE2 HE2 sing N N 361 GLU OXT HXT sing N N 362 GLY N CA sing N N 363 GLY N H sing N N 364 GLY N H2 sing N N 365 GLY CA C sing N N 366 GLY CA HA2 sing N N 367 GLY CA HA3 sing N N 368 GLY C O doub N N 369 GLY C OXT sing N N 370 GLY OXT HXT sing N N 371 HIS N CA sing N N 372 HIS N H sing N N 373 HIS N H2 sing N N 374 HIS CA C sing N N 375 HIS CA CB sing N N 376 HIS CA HA sing N N 377 HIS C O doub N N 378 HIS C OXT sing N N 379 HIS CB CG sing N N 380 HIS CB HB2 sing N N 381 HIS CB HB3 sing N N 382 HIS CG ND1 sing Y N 383 HIS CG CD2 doub Y N 384 HIS ND1 CE1 doub Y N 385 HIS ND1 HD1 sing N N 386 HIS CD2 NE2 sing Y N 387 HIS CD2 HD2 sing N N 388 HIS CE1 NE2 sing Y N 389 HIS CE1 HE1 sing N N 390 HIS NE2 HE2 sing N N 391 HIS OXT HXT sing N N 392 HOH O H1 sing N N 393 HOH O H2 sing N N 394 ILE N CA sing N N 395 ILE N H sing N N 396 ILE N H2 sing N N 397 ILE CA C sing N N 398 ILE CA CB sing N N 399 ILE CA HA sing N N 400 ILE C O doub N N 401 ILE C OXT sing N N 402 ILE CB CG1 sing N N 403 ILE CB CG2 sing N N 404 ILE CB HB sing N N 405 ILE CG1 CD1 sing N N 406 ILE CG1 HG12 sing N N 407 ILE CG1 HG13 sing N N 408 ILE CG2 HG21 sing N N 409 ILE CG2 HG22 sing N N 410 ILE CG2 HG23 sing N N 411 ILE CD1 HD11 sing N N 412 ILE CD1 HD12 sing N N 413 ILE CD1 HD13 sing N N 414 ILE OXT HXT sing N N 415 LEU N CA sing N N 416 LEU N H sing N N 417 LEU N H2 sing N N 418 LEU CA C sing N N 419 LEU CA CB sing N N 420 LEU CA HA sing N N 421 LEU C O doub N N 422 LEU C OXT sing N N 423 LEU CB CG sing N N 424 LEU CB HB2 sing N N 425 LEU CB HB3 sing N N 426 LEU CG CD1 sing N N 427 LEU CG CD2 sing N N 428 LEU CG HG sing N N 429 LEU CD1 HD11 sing N N 430 LEU CD1 HD12 sing N N 431 LEU CD1 HD13 sing N N 432 LEU CD2 HD21 sing N N 433 LEU CD2 HD22 sing N N 434 LEU CD2 HD23 sing N N 435 LEU OXT HXT sing N N 436 LYS N CA sing N N 437 LYS N H sing N N 438 LYS N H2 sing N N 439 LYS CA C sing N N 440 LYS CA CB sing N N 441 LYS CA HA sing N N 442 LYS C O doub N N 443 LYS C OXT sing N N 444 LYS CB CG sing N N 445 LYS CB HB2 sing N N 446 LYS CB HB3 sing N N 447 LYS CG CD sing N N 448 LYS CG HG2 sing N N 449 LYS CG HG3 sing N N 450 LYS CD CE sing N N 451 LYS CD HD2 sing N N 452 LYS CD HD3 sing N N 453 LYS CE NZ sing N N 454 LYS CE HE2 sing N N 455 LYS CE HE3 sing N N 456 LYS NZ HZ1 sing N N 457 LYS NZ HZ2 sing N N 458 LYS NZ HZ3 sing N N 459 LYS OXT HXT sing N N 460 MET N CA sing N N 461 MET N H sing N N 462 MET N H2 sing N N 463 MET CA C sing N N 464 MET CA CB sing N N 465 MET CA HA sing N N 466 MET C O doub N N 467 MET C OXT sing N N 468 MET CB CG sing N N 469 MET CB HB2 sing N N 470 MET CB HB3 sing N N 471 MET CG SD sing N N 472 MET CG HG2 sing N N 473 MET CG HG3 sing N N 474 MET SD CE sing N N 475 MET CE HE1 sing N N 476 MET CE HE2 sing N N 477 MET CE HE3 sing N N 478 MET OXT HXT sing N N 479 PHE N CA sing N N 480 PHE N H sing N N 481 PHE N H2 sing N N 482 PHE CA C sing N N 483 PHE CA CB sing N N 484 PHE CA HA sing N N 485 PHE C O doub N N 486 PHE C OXT sing N N 487 PHE CB CG sing N N 488 PHE CB HB2 sing N N 489 PHE CB HB3 sing N N 490 PHE CG CD1 doub Y N 491 PHE CG CD2 sing Y N 492 PHE CD1 CE1 sing Y N 493 PHE CD1 HD1 sing N N 494 PHE CD2 CE2 doub Y N 495 PHE CD2 HD2 sing N N 496 PHE CE1 CZ doub Y N 497 PHE CE1 HE1 sing N N 498 PHE CE2 CZ sing Y N 499 PHE CE2 HE2 sing N N 500 PHE CZ HZ sing N N 501 PHE OXT HXT sing N N 502 PRO N CA sing N N 503 PRO N CD sing N N 504 PRO N H sing N N 505 PRO CA C sing N N 506 PRO CA CB sing N N 507 PRO CA HA sing N N 508 PRO C O doub N N 509 PRO C OXT sing N N 510 PRO CB CG sing N N 511 PRO CB HB2 sing N N 512 PRO CB HB3 sing N N 513 PRO CG CD sing N N 514 PRO CG HG2 sing N N 515 PRO CG HG3 sing N N 516 PRO CD HD2 sing N N 517 PRO CD HD3 sing N N 518 PRO OXT HXT sing N N 519 SER N CA sing N N 520 SER N H sing N N 521 SER N H2 sing N N 522 SER CA C sing N N 523 SER CA CB sing N N 524 SER CA HA sing N N 525 SER C O doub N N 526 SER C OXT sing N N 527 SER CB OG sing N N 528 SER CB HB2 sing N N 529 SER CB HB3 sing N N 530 SER OG HG sing N N 531 SER OXT HXT sing N N 532 THR N CA sing N N 533 THR N H sing N N 534 THR N H2 sing N N 535 THR CA C sing N N 536 THR CA CB sing N N 537 THR CA HA sing N N 538 THR C O doub N N 539 THR C OXT sing N N 540 THR CB OG1 sing N N 541 THR CB CG2 sing N N 542 THR CB HB sing N N 543 THR OG1 HG1 sing N N 544 THR CG2 HG21 sing N N 545 THR CG2 HG22 sing N N 546 THR CG2 HG23 sing N N 547 THR OXT HXT sing N N 548 TRP N CA sing N N 549 TRP N H sing N N 550 TRP N H2 sing N N 551 TRP CA C sing N N 552 TRP CA CB sing N N 553 TRP CA HA sing N N 554 TRP C O doub N N 555 TRP C OXT sing N N 556 TRP CB CG sing N N 557 TRP CB HB2 sing N N 558 TRP CB HB3 sing N N 559 TRP CG CD1 doub Y N 560 TRP CG CD2 sing Y N 561 TRP CD1 NE1 sing Y N 562 TRP CD1 HD1 sing N N 563 TRP CD2 CE2 doub Y N 564 TRP CD2 CE3 sing Y N 565 TRP NE1 CE2 sing Y N 566 TRP NE1 HE1 sing N N 567 TRP CE2 CZ2 sing Y N 568 TRP CE3 CZ3 doub Y N 569 TRP CE3 HE3 sing N N 570 TRP CZ2 CH2 doub Y N 571 TRP CZ2 HZ2 sing N N 572 TRP CZ3 CH2 sing Y N 573 TRP CZ3 HZ3 sing N N 574 TRP CH2 HH2 sing N N 575 TRP OXT HXT sing N N 576 TYR N CA sing N N 577 TYR N H sing N N 578 TYR N H2 sing N N 579 TYR CA C sing N N 580 TYR CA CB sing N N 581 TYR CA HA sing N N 582 TYR C O doub N N 583 TYR C OXT sing N N 584 TYR CB CG sing N N 585 TYR CB HB2 sing N N 586 TYR CB HB3 sing N N 587 TYR CG CD1 doub Y N 588 TYR CG CD2 sing Y N 589 TYR CD1 CE1 sing Y N 590 TYR CD1 HD1 sing N N 591 TYR CD2 CE2 doub Y N 592 TYR CD2 HD2 sing N N 593 TYR CE1 CZ doub Y N 594 TYR CE1 HE1 sing N N 595 TYR CE2 CZ sing Y N 596 TYR CE2 HE2 sing N N 597 TYR CZ OH sing N N 598 TYR OH HH sing N N 599 TYR OXT HXT sing N N 600 VAL N CA sing N N 601 VAL N H sing N N 602 VAL N H2 sing N N 603 VAL CA C sing N N 604 VAL CA CB sing N N 605 VAL CA HA sing N N 606 VAL C O doub N N 607 VAL C OXT sing N N 608 VAL CB CG1 sing N N 609 VAL CB CG2 sing N N 610 VAL CB HB sing N N 611 VAL CG1 HG11 sing N N 612 VAL CG1 HG12 sing N N 613 VAL CG1 HG13 sing N N 614 VAL CG2 HG21 sing N N 615 VAL CG2 HG22 sing N N 616 VAL CG2 HG23 sing N N 617 VAL OXT HXT sing N N 618 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RQ3 'double helix' 4RQ3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.222 -0.023 -0.491 -13.693 -5.643 -1.649 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.229 0.025 0.320 0.575 -8.169 -0.585 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 -0.369 0.070 0.182 3.919 -14.964 -1.212 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 -0.318 -0.176 0.582 1.649 -19.238 -1.143 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -0.369 -0.231 0.068 -8.677 -8.298 -3.987 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 -0.402 -0.116 0.360 -3.409 -19.488 -2.756 6 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.178 -0.101 0.228 -8.375 -17.105 2.503 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.286 -0.015 -0.029 2.672 -9.059 0.945 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.319 -0.212 -0.195 -3.884 -11.098 -0.821 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 -0.079 -0.083 0.039 -4.132 -11.847 3.917 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 0.195 0.027 -0.075 4.100 -9.855 4.217 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 -0.235 -0.166 -0.200 -4.731 -9.504 -1.774 12 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.440 -0.227 -0.307 -3.815 -5.867 -0.162 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.185 -0.146 -0.489 -23.039 -7.323 1.626 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 -0.140 -0.070 0.196 -16.153 -6.911 2.823 15 P_DC10:DG7_T P 10 ? T 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.289 -0.075 2.959 -7.307 -0.207 33.204 -0.098 -0.574 2.954 -0.357 12.598 33.977 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.671 0.668 3.162 4.753 -0.926 37.133 1.160 -0.436 3.204 -1.447 -7.424 37.436 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 0.052 0.633 3.405 -1.977 3.253 36.435 0.539 -0.367 3.439 5.186 3.151 36.627 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 -0.281 1.618 3.707 1.988 -8.977 44.538 2.957 0.554 3.323 -11.697 -2.590 45.430 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.551 -0.880 3.291 2.129 1.418 35.548 -1.643 1.209 3.217 2.319 -3.482 35.637 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.424 -0.005 3.004 2.575 9.710 29.839 -1.671 1.223 2.819 18.218 -4.832 31.448 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.390 -0.188 3.458 1.227 9.333 35.412 -1.652 -0.443 3.315 15.018 -1.975 36.604 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 0.168 -0.286 3.213 -1.695 3.097 35.541 -0.903 -0.513 3.166 5.057 2.769 35.711 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 0.047 -0.534 3.030 0.375 -0.692 31.029 -0.874 -0.021 3.041 -1.293 -0.700 31.039 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 0.025 -0.470 3.430 1.983 9.527 34.134 -2.214 0.258 3.185 15.835 -3.295 35.454 10 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.530 -0.506 3.260 2.350 4.139 33.669 -1.522 -0.534 3.205 7.102 -4.032 33.994 11 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 1.434 -0.560 3.790 5.504 11.276 32.909 -2.896 -1.414 3.598 19.063 -9.305 35.158 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 -0.539 -0.762 3.195 -3.411 7.669 31.731 -2.614 0.393 2.975 13.727 6.106 32.795 13 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; DTP 6 'CALCIUM ION' CA 7 'SODIUM ION' NA 8 'CHLORIDE ION' CL 9 'ACETATE ION' ACT 10 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4KLD _pdbx_initial_refinement_model.details 'PDB entry 4KLD' #